View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10932_low_7 (Length: 480)
Name: NF10932_low_7
Description: NF10932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10932_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 4 - 464
Target Start/End: Original strand, 19089084 - 19089544
Alignment:
| Q |
4 |
atgaactgtttgatttcgatcaaatagtgatgtagttactaaatgtgtgagtgcgtacaattagtgacaacaaggaatctcggtcctatagtgaacgcat |
103 |
Q |
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| T |
19089084 |
atgaaccgtttgatttcgatcaaatagtgacgtagttactaaatgtgtgagtgcgtacaattagtgataacaaggaatctcggtcctatagtgaacgcat |
19089183 |
T |
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| Q |
104 |
ttgagaattttatattgaatgagatatgaaatgaacaatatcacctaagtcccttaatataagactcattgagtaaaaaggttgtcgcggcaattgaaat |
203 |
Q |
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| T |
19089184 |
ttgagaattttatattaaatgagatatgaaatgaacaataccacctaagtcccttaatataagactcattgagtaaaaagggtttcgcgacaattgaaat |
19089283 |
T |
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| Q |
204 |
tgtttccaaatttcaccttttagaaaagaaaattagttgatattttcgtcgtaatatttatcaccgattacaaacaaatatgtaacttaattagaagttt |
303 |
Q |
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| T |
19089284 |
tgtctccaaatttcaccttttagaaaagaaaattagttaatattttcgtcgtaatatttatcactgattacaaacaaatatgtaacttaattagaagttt |
19089383 |
T |
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| Q |
304 |
ttggggaaaaattagaaaagtgttctatatttagtgagaaagttagtatttacaacgatagatatcactcatcttacaagtaagttctataggtttgaat |
403 |
Q |
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| T |
19089384 |
tttgggaaaaattagaaaagtgttctatatttagtgagaaaattagtatttacaacgatagatatcactcatcttacaagtaagttctataggtttgaat |
19089483 |
T |
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| Q |
404 |
taagtctaactcaaactctaagatggtggtaaagactatccattcttcgttggatcatttc |
464 |
Q |
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| T |
19089484 |
taagtctaactcaaactctaagatggtggtaaagactatccattcttcattggatcatttc |
19089544 |
T |
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