View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10935_high_7 (Length: 254)
Name: NF10935_high_7
Description: NF10935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10935_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9733337 - 9733100
Alignment:
| Q |
1 |
gtgaatggcacatcttgagtgtaatctaagggccccaggaggaagttctcaacaagaaaaaggtcaataatttgtggttggaatttcatattttattact |
100 |
Q |
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| T |
9733337 |
gtgaatggcacatcttgagtgtaatctaagggtcccaggaggaagttctcaacaagaaaaaggtcaataatttgtggttggaatttcatattttattact |
9733238 |
T |
|
| Q |
101 |
ctctttggttactttcaaagttcatacacaaaagtgaaatgcttgtgnnnnnnnagcaatttttaatattgtgttgttctttgtctaattttgataaaaa |
200 |
Q |
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| T |
9733237 |
ctctttggttactttcaaagttcatacacaaaagtgaaatgcttgtgtttttttagcaatttttaatattgtgttgttctttgtctaattttgataaaaa |
9733138 |
T |
|
| Q |
201 |
agatggatttgagcgacccttttaccttatgaacatgg |
238 |
Q |
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| ||| |||||||||||||||||||||||||||||||| |
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| T |
9733137 |
atatgaatttgagcgacccttttaccttatgaacatgg |
9733100 |
T |
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