View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10937_low_3 (Length: 330)

Name: NF10937_low_3
Description: NF10937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10937_low_3
NF10937_low_3
[»] chr8 (23 HSPs)
chr8 (20-181)||(3616464-3616625)
chr8 (21-179)||(24789867-24790025)
chr8 (20-181)||(1376541-1376702)
chr8 (20-183)||(2620555-2620718)
chr8 (20-181)||(6109975-6110136)
chr8 (27-182)||(19643110-19643266)
chr8 (31-181)||(20216583-20216733)
chr8 (31-181)||(20236181-20236331)
chr8 (31-177)||(30801611-30801757)
chr8 (20-181)||(24891045-24891206)
chr8 (33-181)||(26560831-26560979)
chr8 (25-182)||(25500407-25500564)
chr8 (59-171)||(2472059-2472171)
chr8 (25-181)||(15542574-15542730)
chr8 (28-181)||(1667527-1667668)
chr8 (79-179)||(7057981-7058081)
chr8 (20-142)||(25419609-25419731)
chr8 (20-142)||(25427949-25428071)
chr8 (29-74)||(9176790-9176835)
chr8 (98-182)||(25178571-25178655)
chr8 (30-89)||(25178652-25178711)
chr8 (20-62)||(7057963-7058005)
chr8 (97-181)||(7583766-7583850)
[»] chr4 (50 HSPs)
chr4 (20-181)||(29148603-29148764)
chr4 (20-181)||(32655106-32655267)
chr4 (20-182)||(42052853-42053015)
chr4 (20-178)||(21076188-21076346)
chr4 (20-181)||(25938719-25938880)
chr4 (20-181)||(42755703-42755864)
chr4 (20-181)||(3094564-3094725)
chr4 (20-181)||(14577150-14577311)
chr4 (20-181)||(52180361-52180522)
chr4 (22-181)||(652599-652758)
chr4 (21-180)||(52595908-52596067)
chr4 (19-181)||(8066319-8066480)
chr4 (20-181)||(12186135-12186296)
chr4 (20-178)||(23147767-23147925)
chr4 (20-182)||(38000958-38001120)
chr4 (20-181)||(2720822-2720983)
chr4 (20-182)||(2224549-2224705)
chr4 (20-181)||(12188129-12188290)
chr4 (23-181)||(54932332-54932490)
chr4 (21-149)||(54978777-54978904)
chr4 (20-175)||(21246201-21246355)
chr4 (20-182)||(3386812-3386968)
chr4 (20-181)||(34459218-34459379)
chr4 (25-178)||(33983504-33983657)
chr4 (20-172)||(41003685-41003838)
chr4 (20-182)||(28928206-28928368)
chr4 (20-181)||(53140985-53141146)
chr4 (20-180)||(2073220-2073374)
chr4 (31-181)||(1757622-1757768)
chr4 (26-181)||(46030571-46030724)
chr4 (44-183)||(52801797-52801936)
chr4 (25-140)||(7250226-7250341)
chr4 (20-178)||(22248235-22248392)
chr4 (20-140)||(38444239-38444359)
chr4 (39-181)||(26337198-26337341)
chr4 (31-181)||(12518361-12518511)
chr4 (31-183)||(46081103-46081255)
chr4 (25-180)||(29405455-29405610)
chr4 (20-181)||(33733750-33733910)
chr4 (49-182)||(39804698-39804832)
chr4 (20-140)||(1730680-1730799)
chr4 (26-181)||(46257733-46257886)
chr4 (32-83)||(22313041-22313092)
chr4 (26-181)||(22830218-22830374)
chr4 (20-181)||(28233713-28233873)
chr4 (22-71)||(7117654-7117703)
chr4 (20-183)||(45097937-45098098)
chr4 (94-181)||(13082593-13082680)
chr4 (98-180)||(51806435-51806517)
chr4 (20-77)||(52801944-52802001)
[»] chr3 (35 HSPs)
chr3 (20-181)||(19619034-19619195)
chr3 (20-181)||(24987005-24987166)
chr3 (21-181)||(41924319-41924479)
chr3 (20-181)||(44792236-44792397)
chr3 (20-181)||(49360300-49360461)
chr3 (20-154)||(39352808-39352942)
chr3 (20-177)||(50480671-50480828)
chr3 (20-181)||(50809153-50809314)
chr3 (20-181)||(50866548-50866709)
chr3 (20-177)||(13735246-13735403)
chr3 (20-181)||(11672078-11672239)
chr3 (20-181)||(25467838-25467999)
chr3 (20-181)||(23297926-23298087)
chr3 (20-181)||(5040653-5040814)
chr3 (20-181)||(45078793-45078953)
chr3 (20-108)||(6408923-6409011)
chr3 (20-179)||(30247644-30247802)
chr3 (20-182)||(48080391-48080553)
chr3 (31-181)||(42096330-42096479)
chr3 (24-83)||(40564286-40564345)
chr3 (28-182)||(14418569-14418723)
chr3 (31-182)||(46819469-46819620)
chr3 (20-180)||(41409846-41410006)
chr3 (98-182)||(26787125-26787209)
chr3 (20-182)||(32995632-32995795)
chr3 (20-180)||(10191728-10191889)
chr3 (25-181)||(36678654-36678811)
chr3 (30-118)||(22844798-22844886)
chr3 (30-85)||(39952869-39952924)
chr3 (97-183)||(43657726-43657812)
chr3 (127-181)||(50508489-50508543)
chr3 (100-181)||(5908710-5908791)
chr3 (35-83)||(50508574-50508622)
chr3 (26-172)||(28956439-28956586)
chr3 (52-163)||(27346991-27347103)
[»] chr2 (34 HSPs)
chr2 (20-181)||(33867139-33867300)
chr2 (20-181)||(25425106-25425267)
chr2 (21-181)||(4481407-4481567)
chr2 (20-182)||(3329513-3329675)
chr2 (20-180)||(31440239-31440399)
chr2 (25-181)||(38620746-38620902)
chr2 (20-183)||(23232085-23232248)
chr2 (20-181)||(13142173-13142334)
chr2 (20-178)||(30241778-30241930)
chr2 (20-181)||(17961056-17961217)
chr2 (20-180)||(29155670-29155830)
chr2 (20-108)||(32422409-32422497)
chr2 (26-181)||(667576-667731)
chr2 (32-181)||(20937420-20937569)
chr2 (20-183)||(4290001-4290162)
chr2 (44-178)||(2657222-2657357)
chr2 (26-181)||(4591796-4591950)
chr2 (25-181)||(15149826-15149982)
chr2 (20-181)||(8027051-8027213)
chr2 (79-181)||(9205542-9205644)
chr2 (49-182)||(15162370-15162504)
chr2 (26-181)||(29545575-29545731)
chr2 (79-178)||(44070050-44070149)
chr2 (20-58)||(44070129-44070167)
chr2 (125-180)||(17249292-17249347)
chr2 (124-178)||(15234477-15234531)
chr2 (97-181)||(12345095-12345179)
chr2 (31-181)||(10391228-10391377)
chr2 (115-182)||(40474795-40474862)
chr2 (131-181)||(7819819-7819869)
chr2 (30-71)||(16711057-16711098)
chr2 (132-181)||(35049126-35049175)
chr2 (53-129)||(38956629-38956705)
chr2 (97-177)||(42970712-42970792)
[»] scaffold0164 (2 HSPs)
scaffold0164 (20-183)||(6704-6867)
scaffold0164 (20-183)||(14585-14748)
[»] chr7 (36 HSPs)
chr7 (20-179)||(46181572-46181731)
chr7 (20-181)||(16567926-16568087)
chr7 (20-181)||(16597575-16597736)
chr7 (20-181)||(12920592-12920753)
chr7 (20-181)||(35092333-35092494)
chr7 (20-181)||(39414924-39415085)
chr7 (20-178)||(5022786-5022944)
chr7 (20-181)||(31455251-31455412)
chr7 (20-178)||(19805385-19805543)
chr7 (19-181)||(27398947-27399109)
chr7 (20-181)||(46783427-46783588)
chr7 (20-181)||(10065851-10066012)
chr7 (20-181)||(43224677-43224838)
chr7 (20-181)||(3551135-3551296)
chr7 (20-155)||(3363320-3363455)
chr7 (20-183)||(33067074-33067237)
chr7 (20-183)||(17171799-17171962)
chr7 (31-181)||(44301095-44301245)
chr7 (20-181)||(40787892-40788053)
chr7 (31-181)||(43702004-43702154)
chr7 (20-181)||(42284864-42285025)
chr7 (25-180)||(25309112-25309267)
chr7 (25-181)||(26299796-26299953)
chr7 (46-181)||(48558226-48558361)
chr7 (20-182)||(5923349-5923507)
chr7 (20-178)||(12499151-12499310)
chr7 (28-181)||(24429916-24430069)
chr7 (25-181)||(9477920-9478082)
chr7 (49-183)||(28066811-28066946)
chr7 (31-182)||(36073088-36073240)
chr7 (20-178)||(9224041-9224200)
chr7 (114-181)||(36073633-36073700)
chr7 (44-181)||(33979257-33979395)
chr7 (121-182)||(21154935-21154996)
chr7 (77-154)||(45116281-45116358)
chr7 (114-182)||(25047405-25047473)
[»] chr1 (48 HSPs)
chr1 (20-182)||(9222595-9222757)
chr1 (20-181)||(13313087-13313248)
chr1 (20-181)||(25814927-25815088)
chr1 (20-181)||(35978103-35978264)
chr1 (20-181)||(29054199-29054360)
chr1 (20-182)||(27783852-27784014)
chr1 (24-181)||(424924-425081)
chr1 (20-182)||(42068720-42068882)
chr1 (20-181)||(44327527-44327687)
chr1 (20-181)||(43634132-43634292)
chr1 (20-182)||(28221319-28221481)
chr1 (20-181)||(48963968-48964123)
chr1 (20-181)||(19506735-19506896)
chr1 (20-180)||(236867-237027)
chr1 (20-181)||(2978769-2978930)
chr1 (20-182)||(20415331-20415493)
chr1 (20-177)||(33794012-33794162)
chr1 (25-177)||(38491778-38491930)
chr1 (20-181)||(945832-945993)
chr1 (20-181)||(2433563-2433724)
chr1 (20-183)||(4892873-4893036)
chr1 (20-183)||(29185451-29185614)
chr1 (20-183)||(33362476-33362639)
chr1 (20-182)||(32835105-32835267)
chr1 (22-182)||(25059455-25059615)
chr1 (31-180)||(21260345-21260494)
chr1 (19-181)||(2974841-2975003)
chr1 (25-182)||(32133875-32134033)
chr1 (20-181)||(7842907-7843068)
chr1 (20-179)||(19494749-19494908)
chr1 (30-154)||(35659894-35660018)
chr1 (29-103)||(19996353-19996427)
chr1 (44-181)||(39027147-39027285)
chr1 (44-181)||(35738552-35738690)
chr1 (25-181)||(28192036-28192193)
chr1 (33-181)||(30490025-30490173)
chr1 (31-181)||(14106675-14106826)
chr1 (20-181)||(7815253-7815413)
chr1 (30-181)||(10786562-10786713)
chr1 (100-181)||(12560251-12560332)
chr1 (31-96)||(13796753-13796817)
chr1 (100-181)||(29511828-29511909)
chr1 (50-181)||(47665775-47665907)
chr1 (22-77)||(3191784-3191839)
chr1 (22-77)||(3200602-3200657)
chr1 (22-77)||(3209439-3209494)
chr1 (114-181)||(16176603-16176670)
chr1 (100-179)||(48514915-48514994)
[»] chr6 (19 HSPs)
chr6 (20-181)||(31071141-31071302)
chr6 (20-181)||(1329158-1329319)
chr6 (21-182)||(33328949-33329110)
chr6 (20-181)||(33331960-33332121)
chr6 (28-181)||(31783600-31783752)
chr6 (20-181)||(20691177-20691338)
chr6 (34-178)||(29640361-29640506)
chr6 (26-182)||(13532529-13532685)
chr6 (25-183)||(7808120-7808278)
chr6 (34-178)||(31510531-31510676)
chr6 (25-181)||(6337550-6337706)
chr6 (20-183)||(1221293-1221456)
chr6 (20-183)||(24446700-24446863)
chr6 (20-181)||(28770143-28770303)
chr6 (44-181)||(9061692-9061830)
chr6 (31-180)||(33959732-33959881)
chr6 (31-156)||(12429783-12429908)
chr6 (132-182)||(6798989-6799039)
chr6 (102-148)||(19045619-19045665)
[»] chr5 (29 HSPs)
chr5 (20-181)||(14088621-14088782)
chr5 (20-181)||(41616929-41617090)
chr5 (21-181)||(14645670-14645830)
chr5 (20-181)||(15718791-15718946)
chr5 (21-183)||(1061314-1061476)
chr5 (25-181)||(31149296-31149452)
chr5 (20-181)||(7978384-7978545)
chr5 (25-181)||(18595718-18595874)
chr5 (20-163)||(14088016-14088159)
chr5 (20-181)||(29456143-29456304)
chr5 (20-183)||(19254027-19254190)
chr5 (20-183)||(41692047-41692210)
chr5 (31-181)||(6277394-6277544)
chr5 (20-183)||(34718363-34718526)
chr5 (25-147)||(22631874-22631996)
chr5 (24-108)||(4572625-4572709)
chr5 (20-180)||(10937789-10937948)
chr5 (20-121)||(6224501-6224600)
chr5 (20-181)||(15673469-15673631)
chr5 (20-137)||(41983587-41983704)
chr5 (93-181)||(4898353-4898441)
chr5 (49-182)||(638908-639042)
chr5 (20-182)||(35853920-35854083)
chr5 (20-181)||(5657204-5657368)
chr5 (20-179)||(25694261-25694420)
chr5 (25-132)||(36470144-36470251)
chr5 (25-181)||(33346550-33346708)
chr5 (114-178)||(31214-31278)
chr5 (50-181)||(16187198-16187330)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-181)||(240064-240225)
[»] scaffold0312 (1 HSPs)
scaffold0312 (24-181)||(5469-5626)
[»] scaffold0230 (1 HSPs)
scaffold0230 (20-183)||(27000-27163)
[»] scaffold0157 (1 HSPs)
scaffold0157 (31-181)||(2400-2550)
[»] scaffold0242 (2 HSPs)
scaffold0242 (49-182)||(12630-12765)
scaffold0242 (49-182)||(21465-21600)
[»] scaffold0938 (1 HSPs)
scaffold0938 (44-183)||(905-1045)
[»] scaffold0062 (2 HSPs)
scaffold0062 (44-183)||(23407-23547)
scaffold0062 (44-183)||(33575-33715)
[»] scaffold0024 (1 HSPs)
scaffold0024 (49-181)||(109559-109692)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 6e-65; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 3616625 - 3616464
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  3616625 cgggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 3616526  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3616525 cctacccattgtgggtattttttgcgggtacccattgggtctgggtccaattgccatcccta 3616464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 24789867 - 24790025
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||     
T  24789867 gggtctgggcagtatagtatccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttacc 24789966  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
    ||| ||||||||| |||||||||||||||  |||||| ||||| |||||||||||||||    
T  24789967 ctacccattgtggatattttttgcgggtattcattgggtctgggtccaattgccatccc 24790025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 1376541 - 1376702
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||  ||| ||||||||||| ||| ||||||    
T  1376541 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaatttggtgggtattacccatatccgtgcccaaacccataaaagcggggttttac 1376640  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||  || |||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  1376641 cctacccaccgtaggtattttttgcgggtacccattgaatctgggtccaattgtcatcccta 1376702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 2620718 - 2620555
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||| || || |||||||||||||| ||||||  |||||||||| | || ||| ||||||    
T  2620718 cggggctgggcagtatagtatccttatccgtgcccatgcccattaaaattcgtgggtattacccggacccgtccccagacccatgatagcggggttttac 2620619  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
     ||| ||||||||| |||||| |||||||| |||||||  |||| |||||||||||||||||||    
T  2620618 cctacccattgtggatattttatgcgggtatccattgggcctgggtccaattgccatccctacc 2620555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 6109975 - 6110136
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||| ||||||||| ||||||||||||||| | |||||| || |||||||||||||  ||||||  |||||||||| | |||||| ||||||    
T  6109975 cgggcctgggcactatagtacctttacccgtgcccataactatttaaattcgtgggtattacccagacccgtccccagacccatgatagtgggattttac 6110074  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| ||| |||| |||||| |  ||| |||||||||||||||||    
T  6110075 cctacccattgtgggtattttatgcaggtatccattgaacatgggtccaattgccatcccta 6110136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 19643266 - 19643110
Alignment:
Q  27 gggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaag-tgggcttttactctatc 125  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| || |||  |||||||||| | ||  ||| |||||| ||| |    
T  19643266 gggcagtatagtacccttaccattgcccatacccatttaaatttgtgggtattacccggacacgtccccagacccatgatagcgggggttttaccctacc 19643167  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    |||||||| |||||| |||||||| |||||||   ||| ||||||||||||||||||    
T  19643166 cattgtggatattttatgcgggtatccattgggcatgggtccaattgccatccctac 19643110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 20216583 - 20216733
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| ||||| |  ||| |||||| |||||||| |||||| ||| |||||    
T  20216583 agtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccatt 20216681  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||| ||| ||||| || ||||| |||||||||||||||||    
T  20216682 gtgggtattttttgcaggtgcccatcgggtctgggtccaattgccatcccta 20216733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 20236181 - 20236331
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| ||||| |  ||| |||||| |||||||| |||||| ||| |||||    
T  20236181 agtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccatt 20236279  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||| ||| ||||| || ||||| |||||||||||||||||    
T  20236280 gtgggtattttttgcaggtgcccatcgggtctgggtccaattgccatcccta 20236331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 30801611 - 30801757
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||  ||| |||||| |||| ||  ||||||  || ||||||    
T  30801611 agtatagtacccttacccgtgcccatacccatttaaatttatgggtattacccagacccgtgcccaaacccatgaaagcggaattttaccgtacccattg 30801710  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
    ||| ||||||||||| ||| |||| ||| |||| | |||||||||||    
T  30801711 tggatattttttgcgagtatccatcggacctgggttcaattgccatc 30801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 24891206 - 24891045
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||| |||||||||||||||||||   || |||| ||||||||||||||||| |||| |  |||||||||| | || ||| ||||||    
T  24891206 cggggctgggcagtataatacccttacccgtgcccatcttcaattaaatttgtgggtattacccggacccatccccagacccatgatagcggggttttac 24891107  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| |||||||| || ||||  |||| |||||||| ||| ||||    
T  24891106 cctacccattgtgggtattttatgcgggtatccgttgggcctgggtccaattgtcatgccta 24891045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 26560979 - 26560831
Alignment:
Q  33 tatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtg 132  Q
    ||||||||| ||||| | | |||||||||||||| ||||||||||||||||| ||||||  ||||| |||| |||| ||| |||||| ||| | |||||     
T  26560979 tatagtacctttacctgcgtccatacccatttaaatttgtgggtattacccggacccgtccccagatccatgaaaggggggttttaccctacctattgta 26560880  T
Q  133 ggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||||| ||||    ||||| |||||||| ||||||||    
T  26560879 ggtattttttgcgggtatccatcaagtctgggtccaattgacatcccta 26560831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 25500407 - 25500564
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||| ||||||| |||||||||| ||||||||   || |||| || |||||||||||||| ||||||  |||||||||| | || ||  |||||| |||     
T  25500407 ctggacagtataatacccttacctgtgcccatcttcaattaaattcgtgggtattacccggacccgtccccagacccatgatagcggagttttaccctac 25500506  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    | |||||||||||||| |||||||| |||||||  |||| |||||||| |||||||||    
T  25500507 ctattgtgggtattttatgcgggtatccattgggcctgggtccaattgtcatccctac 25500564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 2472171 - 2472059
Alignment:
Q  59 ccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattgga 158  Q
    |||||||| || |||||||||||||| |||| |  |||||||||| | || ||| |||||| ||| ||||||||| |||||| |||||||| ||||||||    
T  2472171 ccatttaaattcgtgggtattacccggacccttccccagacccatgatagcggggttttaccctacccattgtggatattttatgcgggtatccattgga 2472072  T
Q  159 tctggatccaatt 171  Q
     ||||||||||||    
T  2472071 cctggatccaatt 2472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 15542574 - 15542730
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| || ||||| ||||||||||  ||||||||||| ||| |||| ||||| ||||||| ||||    ||| ||||||||||| ||| |||||| |||    
T  15542574 ctgggtagcatagtgcccttacccgcacccatacccatctaaatttgcgggtaattacccggacccaaggccatacccataaaagcggggttttac-cta 15542672  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    || |||| ||||||||||||||||| ||||| |   |||| |||||||| ||||||||    
T  15542673 tctattgcgggtattttttgcgggtgcccatcgagcctgggtccaattgtcatcccta 15542730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 1667527 - 1667668
Alignment:
Q  28 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatcca 127  Q
    |||||||||||||| ||||||||| ||||| |||||||| || ||||||||||||||            |||| || | || ||| |||||| ||| |||    
T  1667527 ggcagtatagtacctttacccgtgtccatagccatttaaattcgtgggtattacccg------------gacctatgatagcggggttttaccctaccca 1667614  T
Q  128 ttgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||| ||| |||||||| |||||||  |||| |||||||||||||||||    
T  1667615 ttgtgggtaatttatgcgggtatccattgggcctgggtccaattgccatcccta 1667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 7057981 - 7058081
Alignment:
Q  79 tacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||| |||||||  ||| |||||| |||| | | |||||| ||| | |||||||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  7057981 tacccttacccgtgcccaaacccatgaaagcgagattttaccctacctattgtgggtattttttgcgggtacccatcggacctgggtccaattaccatcc 7058080  T
Q  179 c 179  Q
    |    
T  7058081 c 7058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 25419609 - 25419731
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||| ||||||| |||||||||| ||||||||   || |||| || ||| |||||| ||| ||||||  |||||||||| | || ||  ||||||    
T  25419609 cggggctggacagtataatacccttacctgtgcccatcttcaattaaattcgtgtgtattatccggacccgtccccagacccatgatagcggagttttac 25419708  T
Q  120 tctatccattgtgggtatttttt 142  Q
     ||| ||||||||||||||||||    
T  25419709 cctacccattgtgggtatttttt 25419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 25427949 - 25428071
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||| ||||||| |||||||||| ||||||||   || |||| || ||| |||||| ||| ||||||  |||||||||| | || ||  ||||||    
T  25427949 cggggctggacagtataatacccttacctgtgcccatcttcaattaaattcgtgtgtattatccggacccgtccccagacccatgatagcggagttttac 25428048  T
Q  120 tctatccattgtgggtatttttt 142  Q
     ||| ||||||||||||||||||    
T  25428049 cctacccattgtgggtatttttt 25428071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 9176835 - 9176790
Alignment:
Q  29 gcagtatagtacccttacccgtgcccatacccatttaattttgtgg 74  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||||    
T  9176835 gcagtatagtactcttgcccgtgcccatacccatttaaatttgtgg 9176790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 25178655 - 25178571
Alignment:
Q  98 acccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    |||||| ||||| || |||||| ||| ||||| |||||||||||||||||||| |||| || |||  || ||||| |||||||||    
T  25178655 acccatgaaagttggattttaccctacccattatgggtattttttgcgggtactcattagacctgagtctaattgtcatccctac 25178571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 25178711 - 25178652
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtaccc 89  Q
    ||||||||||||||||| ||| ||||||| |||||||  ||| ||||| |||||||||||    
T  25178711 cagtatagtacccttacgcgtacccatactcatttaaaattgcgggtaatacccgtaccc 25178652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 7057963 - 7058005
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccat 62  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||    
T  7057963 cggggctgggtagtatagtacccttacccgtgcccaaacccat 7058005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 7583766 - 7583850
Alignment:
Q  97 gacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||| |||| ||| |||||| ||| |||||| |||| ||||||| ||||| |||| ||  |||| ||||||||||| |||||    
T  7583766 gacccatgaaagcggggttttaccctacccattgcgggttttttttgtgggtatccatcgggcctgggtccaattgccaccccta 7583850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 29148764 - 29148603
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  29148764 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 29148665  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  29148664 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 29148603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 32655267 - 32655106
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  32655267 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 32655168  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  32655167 cctatccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 32655106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 42053015 - 42052853
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  42053015 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 42052916  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||    
T  42052915 cctacccattgtgggtattttttgcgggtatccattgggtctgggttcaattgccatccctac 42052853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 21076188 - 21076346
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  21076188 cgggtctgggcaatatagtatccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 21076287  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
     ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21076288 cctatccattgtggatattttttgcgggtacccattgggtctgggtccaattgccatcc 21076346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 25938719 - 25938880
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||    
T  25938719 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgtccagacccataaaagcggagttttac 25938818  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||  ||||| |||||| |||||| |||||||||||||||||    
T  25938819 cctacccattgtgggtattttttatgggtatccattgaatctgggtccaattgccatcccta 25938880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 42755703 - 42755864
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  42755703 cgggtctgggcagtataatacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 42755802  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  42755803 cctacccattgtgggtattttttgcgggtatccattggatctgggtctaattgccatcccta 42755864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 3094725 - 3094564
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||| ||| ||||||    
T  3094725 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattactcgtactcgtgcccagacccataaaagcggggttttac 3094626  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||  ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  3094625 ccttcccattgtgggtattttttgcgggtacccattgggtctgggttcaattgccatcccta 3094564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 14577150 - 14577311
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||| ||||||    
T  14577150 cgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccgtgtccagatccacaaaagcgggattttac 14577249  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  14577250 cctatccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 14577311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 52180522 - 52180361
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||| ||| ||||||    
T  52180522 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccatgcccagatccataaaagcggggttttac 52180423  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||    
T  52180422 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgtcatcccta 52180361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 652599 - 652758
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactc 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| |||||| |    
T  652599 ggtctgggcagtataatacccttacccgtgcccatacccatttaattttgtgggtattacccgtacctgtgcccagacccataaaagaggggttttaccc 652698  T
Q  122 tatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||  |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  652699 tacacattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 52595908 - 52596067
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||||| ||| ||||||     
T  52595908 gggtctgggcagtatagtacccttacccgtgcccatacccattttattttgtgggtattacccgtacccgtgcccagatctataaaagcggggttttacc 52596007  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  52596008 ctatctattgtgagtattttttgcgggtatccattggatctgggtccaattgccatccct 52596067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 8066319 - 8066480
Alignment:
Q  19 acgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||| |||| ||| |||||    
T  8066319 acgggtctggacaatatagtacccttacccgtgcccatacccatttagttttgtgggtattacccgtacccgtgctcagacccat-aaagcgggatttta 8066417  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  8066418 ccctatccattgtgggtattttttgcgggtacccattagatctggatccaattgtcatcccta 8066480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 12186135 - 12186296
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||    
T  12186135 cgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccgtgtccagatccataaaagcgggtttttac 12186234  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  12186235 cctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 12186296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 23147767 - 23147925
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||| ||| ||||||    
T  23147767 cgggtctgggcagtatagtacctttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcctagatccataaaagcggggttttac 23147866  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
     ||| ||||||||| ||||||||||||||| ||||||| | ||| ||||||||||||||    
T  23147867 cctacccattgtggatattttttgcgggtatccattgggtttgggtccaattgccatcc 23147925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 38000958 - 38001120
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||| ||||||||||  ||| ||||||    
T  38000958 cgggtctgggcagtatagtacccttactcgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccatacccataaaaacggggttttac 38001057  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||| | ||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  38001058 cctacccattataggtattttttgcgagtacccattgggtctgggtccaattgccatccctac 38001120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 2720983 - 2720822
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||| ||||||||| ||| ||||||    
T  2720983 cgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccaagtccagatccataaaagcgggtttttac 2720884  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  2720883 cctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 2720822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 2224705 - 2224549
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||      ||||||||||||||| ||| ||||||    
T  2224705 cgggtctgggcagtatagtacccttacccgtgcccatacccatataattttgtgggtattactcgtac------ccagacccataaaagaggggttttac 2224612  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||||||||||||| ||||||||||| ||||||||||||||||| | ||||| ||||||||||    
T  2224611 cctatccattgtggatattttttgcgagtacccattggatctgggttcaattaccatccctac 2224549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 12188129 - 12188290
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||| ||||||||| ||| ||||||    
T  12188129 cgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccaagtccagatccataaaagcgggtttttac 12188228  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| ||||||||| ||||| ||||||||||||| |||||||||| ||||||    
T  12188229 cctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccgtcccta 12188290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 54932490 - 54932332
Alignment:
Q  23 gtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactct 122  Q
    ||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| |||||  ||    
T  54932490 gtctgggcagtatagtactgttacccgtgcccatgtccatttaattttgtgggtattacccgtaccagtgcccagacccataaaagcgggattttatcct 54932391  T
Q  123 atccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  54932390 acccattgtaggtattttttgagtgtacccattggatctgggtccaattgccatcccta 54932332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 54978904 - 54978777
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||||     
T  54978904 gggtctgggcagtataatacccttacccgtgcccatacccatttaattttgtgggtattacccgtacctgtgcccagacccataaaagcggggttttac- 54978806  T
Q  121 ctatccattgtgggtattttttgcgggta 149  Q
    ||| |||||||||||||||||||||||||    
T  54978805 ctacccattgtgggtattttttgcgggta 54978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 21246201 - 21246355
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||| || ||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||| ||||||||||| ||| ||||||    
T  21246201 cgggtctggacaatatagtacccttacccgtgccaatatccatttaattctgtgggtattatccgtacccgtgtccatacccataaaagcgggattttac 21246300  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgcca 175  Q
     ||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  21246301 cctacccattgtgggtatttttt-cgggtacccattggacctgggtccaattgcca 21246355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 3386968 - 3386812
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||       ||||||||||| ||| ||||||    
T  3386968 cgggtctgggcagtatagtacccttacccgtgcccatacccctttaatttagtgggtattacccgtgcccg------aacccataaaagcggggttttac 3386875  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||||||||||||||||||| ||||||| | ||  ||||||||||||||||||    
T  3386874 cctacccattgtgggtattttttgcgggtatccattgggtttgtgtccaattgccatccctac 3386812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 34459379 - 34459218
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||  ||| |||||| | || ||  ||||||    
T  34459379 cggggctgggcagtatagtacccttacccgtgcccatacccattaaaattcgtgggtattacccggacccgtccccatacccatgatagcggtgttttac 34459280  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| | |||||||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  34459279 cctaccaattgtgggtattttatgcgggtatccattggacctgggtccaattgccatcccta 34459218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 33983504 - 33983657
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||  | ||| |||| | || ||  |||||  |||     
T  33983504 ctgggcagtatagtacccttacccgtgctcatacccatttaaatttgtgggtattacccggacccgtccctagatccatgatagcggagttttatcctac 33983603  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||||| |||||||| |||||||| |||||||  |||| ||||||||||||||    
T  33983604 ccattgtaggtattttatgcgggtatccattgggcctgggtccaattgccatcc 33983657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 41003685 - 41003838
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||| ||| ||||||    
T  41003685 cgggtcttagcagtataatacccttacccgtgtccatacccatttaattttgtgggtattactcgtactcgtgcccagacccataaaagcggggttttac 41003784  T
Q  120 tctatccattgtgggta-ttttttgcgggtacccattggatctggatccaattg 172  Q
      || ||||||| |||| |||||||| |||| ||||| | ||||| ||||||||    
T  41003785 catacccattgtaggtatttttttgcaggtatccattaggtctgggtccaattg 41003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 28928368 - 28928206
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| | | ||  ||| |||||||| || ||| ||||||    
T  28928368 cgggactgtgcagtatagtacccttacccgtgcccatacccatttaaattcgtgggtattacccggatctgtccccaaacccataatagcggggttttac 28928269  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||| |||||| |||||||| |||||||   ||   |||||||||||||||||    
T  28928268 cctacccattgtggatattttatgcgggtatccattgggcatgtgcccaattgccatccctac 28928206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 53140985 - 53141146
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| |||| ||||||| |||||||  ||| | |||| |||| ||| |||||    
T  53140985 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 53141083  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||    
T  53141084 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatcccta 53141146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 2073374 - 2073220
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |  | |||||||| | || ||| ||||||    
T  2073374 cgggcctgggcagtatagtacccttacccgtgcccatacccatttaaatttgtgggtattacccggacccctccctagacccatgatagcggggttttac 2073275  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
         ||||||| |||||||| |||| ||| |||||||  |||| ||||||||||||||||    
T  2073274 -----ccattgtaggtattttatgcgcgtatccattgggcctgg-tccaattgccatccct 2073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 1757768 - 1757622
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||||||||||||||||||||||||||   | ||||||||||||| ||| || ||| ||||    ||| |||| ||| |||||| ||| |||||     
T  1757768 agtatagtacccttacccgtgcccatacccataacaatttgtgggtattatccggactcgtgtcca----catgaaagcggggttttaccctacccatta 1757673  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  1757672 tgggtattttttgcaggtatccattgggtctgggtccaattgccatcccta 1757622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 46030571 - 46030724
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatc 125  Q
    |||| ||||||||||||||||||||||| ||||||||   | ||||||||||||||  | ||||||| ||| | ||||||||| ||  ||||||  ||||    
T  46030571 tgggtagtatagtacccttacccgtgcctatacccataacaatttgtgggtattac--ggacccgtacccatatccataaaagcggagttttacattatc 46030668  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||||||||| ||||| ||||||| |||||| |||||| |||||||||||||||||    
T  46030669 tattgtgggtttttttagcgggtatccattgaatctgggtccaattgccatcccta 46030724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 52801936 - 52801797
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    |||||||||||||||||||| || |||| ||||| |||||| |||||||  ||| | ||||||||| ||| |||||| ||| ||||||||||||||||||    
T  52801936 tacccgtgcccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccataaaagcggggttttaccctacccattgtgggtatttttt 52801838  T
Q  143 gcgggtacccattggatctggatccaattgccatccctacc 183  Q
    ||||||| |||| |  ||||| |||||||||||||||||||    
T  52801837 gcgggtatccatcgagtctgggtccaattgccatccctacc 52801797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 7250341 - 7250226
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||| |  |||||||||| | || ||| |||||| |||     
T  7250341 ctgggcagtatagtacctttacccgtgcccatacccatttaaatttgtggatattacccggacccttccccagacccattatagcgggattttaccctac 7250242  T
Q  125 ccattgtgggtatttt 140  Q
    ||||||| | ||||||    
T  7250241 ccattgtagatatttt 7250226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 22248235 - 22248392
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||||||| |||| ||||| ||||||||||| || |||| |||| ||||||| || ||||| ||| || ||| |||| ||| |||||    
T  22248235 cggggctgggtagtatagtactcttatccgtgtccatacccattaaaatttgcgggtaattaccc-tatccgtacccatactcatgaaagcggggtttta 22248333  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||| |||||||||||| ||||||||||| ||||| || ||||| ||||||||||||||    
T  22248334 ctctacccattgtgggta-tttttgcgggtgcccatcgggtctgggtccaattgccatcc 22248392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 38444239 - 38444359
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| |||| |  ||||||  || | |||||| ||||||    
T  38444239 cggggctgggcagtatagtacccttacccgtacccatacccatttaaattcgtgggtattacccggacccttccccagacttatgatagtggggttttac 38444338  T
Q  120 tctatccattgtgggtatttt 140  Q
     ||| ||||| ||| ||||||    
T  38444339 cctacccattatggatatttt 38444359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 26337341 - 26337198
Alignment:
Q  39 acccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtat 137  Q
    |||| ||||||||||||||||||| ||| |||| ||||| |||||| |||||    || ||||||| ||||  || |||||| ||| |||| | ||||||    
T  26337341 acccatacccgtgcccatacccatataaatttgcgggtaattacccatacccaagcccggacccatgaaagcagggttttaccctacccatagcgggtat 26337242  T
Q  138 tttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||| ||||| || ||||| |||||||||||||||||    
T  26337241 tttttgcgggtgcccatagggtctgggtccaattgccatcccta 26337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 12518511 - 12518361
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||  |||||||||  ||||||||||| ||| |||| ||  |||||||| || |    ||| ||||||||||||||| |||||| ||| ||||||    
T  12518511 agtatagtggccttacccgcacccatacccatctaaatttgcggtaattacccggactcaagcccatacccataaaagtggggttttaccctacccattg 12518412  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |  |||||||||  |||||||||| ||| || |||||||||||||||||||    
T  12518411 taagtattttttatgggtacccatcggacctagatccaattgccatcccta 12518361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 46081103 - 46081255
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    |||||| |||||||||||||| ||||| ||||| || |||| | || ||||||| |||||||  ||| |||||| |||| ||| |||||| ||| |||||    
T  46081103 agtataatacccttacccgtgtccatatccattaaaatttgcgcgtaattaccc-tacccgtgcccatacccatgaaagcggggttttaccctacccatt 46081201  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    |||| |||||||||||| | | ||| | |||||| |||||||| ||||||||||    
T  46081202 gtggatattttttgcggatgctcatcgaatctgggtccaattgtcatccctacc 46081255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 29405610 - 29405455
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||||||||| |||||||||| ||||| ||||| || |||| ||||| |||||| |||||||  ||| |||||| |||| ||  |||||  |||    
T  29405610 ctgggtagtatagtactcttacccgtgtccatatccattaaaatttgcgggtaattaccc-tacccgtgcccatacccatgaaagcggagttttatccta 29405512  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
     | ||| |||||||||||||||||| |||||  | ||||| ||||||||||||||||    
T  29405511 ccaattatgggtattttttgcgggtgcccatcaggtctgggtccaattgccatccct 29405455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 33733750 - 33733910
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||||||||||||||||||  |||||||||| || |||| |||| ||||| | ||||||| ||||   ||||||||| ||| |||||    
T  33733750 cggggctgggtagtatagtacccttacccgtgttcatacccattaaaatttgcgggtaattactc-tacccgtgtccatgtccataaaagcggg-tttta 33733847  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| ||||||||  ||||||||||||||| |||| |  ||| | |||||||||||| ||||    
T  33733848 ccctacccattgtgaatattttttgcgggtatccatcgagtctaggtccaattgccattccta 33733910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 39804698 - 39804832
Alignment:
Q  49 gtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcggg 147  Q
    |||||||||||||| ||| |||| ||||| |||||| |||||    ||||||||||||||| | | |||||  ||| |||| | ||||||||||||||||    
T  39804698 gtgcccatacccatataaatttgcgggtaattacccatacccaagcccagacccataaaagcgaggttttatcctacccatagcgggtattttttgcggg 39804797  T
Q  148 tacccattggatctggatccaattgccatccctac 182  Q
    | ||||| || ||||| |||||||| |||||||||    
T  39804798 tgcccatagggtctgggtccaattgtcatccctac 39804832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 1730799 - 1730680
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||| |||||| || |||||  ||| |||| || |||||||||||||| |||||| | |||| |||| | || ||| ||||||    
T  1730799 cggggctgggcagtatagtactcttacctgtacccatctccaattaaattcgtgggtattacccgaacccgtct-cagatccatgatagcggggttttac 1730701  T
Q  120 tctatccattgtgggtatttt 140  Q
     ||| ||||||||||||||||    
T  1730700 cctacccattgtgggtatttt 1730680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 46257886 - 46257733
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatc 125  Q
    |||| ||||||||||||||||||||| | | ||||||   | ||||||||||||||  | ||||||  ||| |||||| ||||  |  |||||| |||||    
T  46257886 tgggtagtatagtacccttacccgtgtctagacccataacaatttgtgggtattac--ggacccgtgcccatacccatgaaagcagagttttacactatc 46257789  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| | | ||||| || |||| |||||| |||||| |||||||||||||||||    
T  46257788 cattgtagatttttttagcaggtatccattgaatctgggtccaattgccatcccta 46257733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 22313092 - 22313041
Alignment:
Q  32 gtatagtacccttacccgtgcccatacccatttaattttgtgggtattaccc 83  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  22313092 gtatagtacccttacccgtgtccatacccatttaaattcgtgggtattaccc 22313041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 22830218 - 22830374
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||| |||||||| ||| |||||||| || ||||| ||||| |||| ||||| ||||||| |||| |  ||| |||||| | || |||  ||||| |||     
T  22830218 tgggtagtatagtgcccatacccgtgtccgtacccttttaagtttgcgggtaattacccggacccatgcccatacccatgatagcggggatttaccctac 22830317  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| ||||| ||||| ||| ||||||| ||| |||| || ||||||||||||||    
T  22830318 ccattgcgggtaatttttacggatacccatcggacctgggtctaattgccatcccta 22830374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 28233873 - 28233713
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| ||| ||||||||||||||| ||| |||| ||||| ||| || |||||    || ||||||| |||| ||| |||||    
T  28233873 cggggctgggtagtacagtgcccatactcgtgcccatacccatataaatttgcgggtaattatccatacccaagcccggacccatgaaagcggggtttta 28233774  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| |||| | |||||||||||||||||   ||  |||||||| |||||||||||||||||    
T  28233773 ccctacccatagcgggtattttttgcgggtgtaca--ggatctgggtccaattgccatcccta 28233713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 7117703 - 7117654
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttg 71  Q
    |||||||||||||||||||||||||||   ||||||||||||||| ||||    
T  7117703 ggtctgggcagtatagtacccttacccacacccatacccatttaaatttg 7117654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 45097937 - 45098098
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| | ||||||||||||| || ||||||||| || |||| ||||| |||||| |||||||  ||| ||| ||||||| ||  |||||    
T  45097937 cggggctgggtagtacaatacccttacccgttcc-atacccattaaaatttgcgggtaattaccc-tacccgtc-ccatacctataaaagcggagtttta 45098033  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| | |||||||||||||||||| |||  ||||  | ||||| |||||||| ||||||||||    
T  45098034 ccctacctattgtgggtattttttgcaggtgtccatcaggtctgggtccaattgtcatccctacc 45098098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 13082593 - 13082680
Alignment:
Q  94 ccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||| ||| |||||| ||| ||||||  ||| ||||||||||||| |||| ||  |||| | |||||| ||||||||    
T  13082593 ccagacccataaaagcggggttttaccctacccattgcaggttttttttgcgggtatccatcgggcctgggttcaattgtcatcccta 13082680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 51806517 - 51806435
Alignment:
Q  98 acccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    ||||||||||||||| |||||| |||  ||||  ||||||||||||| ||| ||||| ||  |||| | ||||||||||||||    
T  51806517 acccataaaagtggggttttaccctactcattacgggtattttttgcaggtgcccatcgggcctgggttcaattgccatccct 51806435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 52802001 - 52801944
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta 77  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||| || |||| |||||    
T  52802001 cggggctgggtagtatagtacccttacctgtgtccatacccattaaaatttgcgggta 52801944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 6e-65; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 19619034 - 19619195
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  19619034 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 19619133  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  19619134 cctacccattgtgggtattttttgtgggtacccattgggtctgggtccaattgccatcccta 19619195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 24987166 - 24987005
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  24987166 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgtccagacccataaaagcggggttttac 24987067  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| | ||| |||||||||||| ||||    
T  24987066 cctacccattgtgggtattttttgcgggtatccattgggtttgggtccaattgccattccta 24987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 41924319 - 41924479
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||     
T  41924319 gggtctgggcagtatagtacccttacccgtgcccatattcatttaattttgtgggtattacccgtacccgtacccagatccataaaagcggggttttacc 41924418  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  41924419 ctacccattgtgggtattttttgcgggtatccattgaatctggatccaattgccatcccta 41924479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 44792397 - 44792236
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||| ||| ||||||    
T  44792397 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacctagaaaagcggggttttac 44792298  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  44792297 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 44792236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 49360300 - 49360461
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  49360300 cgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 49360399  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  49360400 cctacccattgtggatattttttgcgggtacccattggatctgggtccaattgccatcccta 49360461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 39352808 - 39352942
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || ||||||    
T  39352808 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtacccagacccataaaagcagggttttac 39352907  T
Q  120 tctatccattgtgggtattttttgcgggtacccat 154  Q
     ||| ||||||||||||||||||||||||||||||    
T  39352908 cctacccattgtgggtattttttgcgggtacccat 39352942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 50480828 - 50480671
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||    
T  50480828 cgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccgtgtccagatccataaaagcggggttttac 50480729  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
     ||| ||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||    
T  50480728 cctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatc 50480671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 50809153 - 50809314
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||| ||| ||||||    
T  50809153 cgggtctgggcagtatagtactcttacccgtgcccatacccatttaattttgcgggtattatccgtactcgtacccagacccataaaagcggggttttac 50809252  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
      || |||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  50809253 cttacccattgtgagtattttttgcaggtacccattgaatctgggtccaattgccatcccta 50809314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 50866709 - 50866548
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||| ||| ||||||    
T  50866709 cgggtctgggcagtatagtactcttacccgtgcccatacccatttaattttgcgggtattatccgtactcgtacccagacccataaaagcggggttttac 50866610  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
      || |||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  50866609 cttacccattgtgagtattttttgcaggtacccattgaatctgggtccaattgccatcccta 50866548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 13735403 - 13735246
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| ||||||||| | ||| |||||||| ||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||    
T  13735403 cgggtctgggtagtatagtatcattatccgtgcccgtacccatttaattttgtgggtattacctgtacccgtgcccagatccataaaagtggggttttac 13735304  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
     ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13735303 cctacccattgtggatattttttgcgggtacccattggatctgggtccaattgccatc 13735246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 11672078 - 11672239
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||| ||||||  |||||||||| | || ||| ||||||    
T  11672078 cgggtctgggcagtatagtacccttacccgtgcccatacccattaaaattcgtggatattacccggacccgtccccagacccatgatagcggggttttac 11672177  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| || ||||| |||||||  |||| |||||||||||||||||    
T  11672178 cctacccattgtgggtattttatgtgggtatccattgggcctgggtccaattgccatcccta 11672239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 25467838 - 25467999
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||| ||||||  |||||||||| | || ||| ||||||    
T  25467838 cggggctgggcagtatagtacccttactcgtgcccatacccatttaaattcgtggatattacccggacccgtccccagacccatgatagcgggattttac 25467937  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| |||||||| |||||||  |||| |||||||| ||||||||    
T  25467938 cctacccattgtgggtattttatgcgggtatccattgggcctgggtccaattgtcatcccta 25467999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 23298087 - 23297926
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| || |||  |||||||||| | |||||| ||||||    
T  23298087 cggggctgggcagtatagtacccttacccgtgctcatacccattaaaatttgtgggtattacccggactcgtccccagacccatgatagtggggttttac 23297988  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| ||| |||| |||||| | |||| || ||||| ||||||||    
T  23297987 cctacccattgtgggtattttatgctggtatccattgaacctgggtctaattgtcatcccta 23297926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 5040814 - 5040653
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| | ||||  ||||| |||| | || ||| ||||||    
T  5040814 cggggctgggcagtatagtatccttacccgtgcccatacccattaaaattcgtgggtattacccggatccgtccccagatccatgatagcggggttttac 5040715  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| |||||| |||||||| |||||||  |||| |||||||||||||||||    
T  5040714 cctacccattgtggatattttatgcgggtatccattgggcctgggtccaattgccatcccta 5040653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 45078953 - 45078793
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| |||||||||||||||| |||| ||||||||||| || |||| |||||||| || |||||||  ||| |||||| |||| ||| ||||||    
T  45078953 cggggctgggtagtatagtacccttacacgtgtccatacccattaaaatttgcgggtattatcc-tacccgtgcccatacccatgaaagcggggttttac 45078855  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| || ||||||||||||||||||||||||||| |  ||||| |||||||||||||||||    
T  45078854 cctacccgttgtgggtattttttgcgggtacccatcgagtctgggtccaattgccatcccta 45078793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 6408923 - 6409011
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaag 108  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| || ||||||||||||||||    
T  6408923 cgggtctcggcagtatagtacccttacccgtgcccatattcatttaattttgtgggtattactcgtacctgtgtccagacccataaaag 6409011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 30247802 - 30247644
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| |||||||||| |||||| ||| ||||||||||| || |||||||  ||||||| |||||||  ||| ||||||||||| ||  ||||||    
T  30247802 cggggctgggtagtatagtactcttacctgtgtccatacccattaaaatttgtggtaattaccc-tacccgtgcccatacccataaaagcggagttttac 30247704  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
     ||| ||||||||||||||||||||||||  |||| || ||||| ||||| |||||||||    
T  30247703 cctacccattgtgggtattttttgcgggtgtccatcgggtctgggtccaactgccatccc 30247644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 48080391 - 48080553
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||  || |  || | | || ||| ||||||    
T  48080391 cggggctgggcattatagtacccttacccgtgcccatacccatttaaattcgtgggtattacccggacccgtccccggttccttgatagcggggttttac 48080490  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| | |||||||||||||| ||| |||| |||||||  || | |||||||| |||||||||    
T  48080491 cctaccaattgtgggtattttatgctggtatccattggtcctaggtccaattgacatccctac 48080553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 42096479 - 42096330
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||| ||||| ||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| ||| || |||||||||    
T  42096479 agtatagtacccttacccgtgtccatatccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggttt-accctatccatt 42096382  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||||||| ||||| || ||||| || ||||||||||||||    
T  42096381 gtgggtattttttgcgggtgcccatcgggtctgggtcaaattgccatcccta 42096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 40564286 - 40564345
Alignment:
Q  24 tctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattaccc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  40564286 tctgggcagtatagtacccttacccgtgcccatacccatttaaattagtgggtattaccc 40564345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 14418569 - 14418723
Alignment:
Q  28 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatcca 127  Q
    ||||||||||||||||||||| | ||||||||||||||| ||| ||| || |||||| | ||  | |  || |||| |||| ||| |||||| ||| |||    
T  14418569 ggcagtatagtacccttacccatacccatacccatttaaatttatggataatacccggatccaaacctggatccatgaaagcggggttttaccctaccca 14418668  T
Q  128 ttgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    || ||||||||||||||||||||| || ||| |||  ||||||||  ||||||||    
T  14418669 ttatgggtattttttgcgggtaccgatcggacctgagtccaattgttatccctac 14418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 46819469 - 46819620
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    |||||||||||||||||||| |||||| ||||   | ||| ||||||||||||| |||| | | || | |||  |||| ||  |||||| ||| ||||||    
T  46819469 agtatagtacccttacccgtacccatatccataacaatttatgggtattacccggacccatgttcatatccaagaaagcggagttttaccctacccattg 46819568  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    ||| ||||||||||||  | |||||  ||||||||||||||| |||||||||    
T  46819569 tggatattttttgcggacatccattaaatctggatccaattgtcatccctac 46819620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 41410006 - 41409846
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||| || |||| | ||| |||| | |||||||  ||| |||||| |||||||| |||||    
T  41410006 cggggctgggtagtatagtacctttacccgtgtccatacccattaaaatttgcgagtaattacgc-tacccgtgcccatacccatgaaagtggggtttta 41409908  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
      ||| | ||||||| |||||||||||||| |||||  | ||||  |||||||| |||||||    
T  41409907 tcctacctattgtggatattttttgcgggtgcccatcaggtctgagtccaattgtcatccct 41409846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 26787209 - 26787125
Alignment:
Q  98 acccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    ||||||||||| ||  |||||  ||| |||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  26787209 acccataaaagcggagttttatcctacccattgcgggtattttttgcgggtgcccatcggatccgggtccaattgccatccctac 26787125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 32995632 - 32995795
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| ||||||||| |||||||||  || |||| ||||| |||||| |||||    || ||||||| |||| ||| |||||    
T  32995632 cggggctgggtagtacagtgcccatacccgtgctcatacccatacaaatttgcgggtaattacccatacccaagccctgacccatgaaagcggggtttta 32995731  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    | ||| |||| | |||||||||||| ||||  |||| || ||||| ||||||||||||||||||    
T  32995732 ccctacccatagcgggtattttttgtgggtgtccatagggtctgggtccaattgccatccctac 32995795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 10191889 - 10191728
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| ||| ||||||||||||||| ||| |||| ||||| |||||| |||||     | ||||||| |||| ||| |||||    
T  10191889 cggggctgggtagtacagtgcccatactcgtgcccatacccatataaatttgcgggtaattacccatacccaagctcggacccatgaaagcggggtttta 10191790  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    | ||| |||| | |||||||||||||| || ||||| | |||||| || |||||||||||||    
T  10191789 ccctacccatagcgggtattttttgcgagtgcccatagaatctgggtctaattgccatccct 10191728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 36678811 - 36678654
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||||||| ||| |||||||||||||| |||| ||| |||| || || |||| | |||||    || |||| || |||| ||| |||||| |||    
T  36678811 ctgggtagtatagtgcccatacccgtgcccatatccatataaatttgcggataattactcatacccaagcccggacctatgaaagcggggttttacccta 36678712  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||| | ||||||||||| ||||| ||||| |||||||| |||||||| ||||||||    
T  36678711 cccatagcgggtatttttttcgggtgcccataggatctgggtccaattgtcatcccta 36678654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22844886 - 22844798
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    ||||||| ||||||||| ||||| |||| |||||||| ||| ||||||||||| | |||||| |||| |||||| |||| ||| |||||    
T  22844886 cagtataatacccttacgcgtgctcatatccatttaaatttatgggtattacctggacccgtgtccaaacccatgaaagcggggtttta 22844798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39952869 - 39952924
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgt 85  Q
    ||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||    
T  39952869 cagtatagtacccttactcgtgcccatatccatttaaattcgtggatattacccgt 39952924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 43657726 - 43657812
Alignment:
Q  97 gacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    ||||||| ||| |||| |||||| ||| |||| | ||||||||||||| |||  |||| || ||| |||||||||||||||||||||    
T  43657726 gacccatgaaattgggattttaccctacccatagcgggtattttttgcaggtgtccatagggtctagatccaattgccatccctacc 43657812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 50508543 - 50508489
Alignment:
Q  127 attgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||| | |||||| ||||||| ||||| |||||||||||||||||    
T  50508543 attgtgggtattttatacgggtatccattgggtctgggtccaattgccatcccta 50508489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 5908710 - 5908791
Alignment:
Q  100 ccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||| |||||||| |||||| ||| |||| | ||||||||||||||||| |||||  | ||||| |||||||| ||||||||    
T  5908710 ccatgaaagtggggttttaccctacccatagcgggtattttttgcgggtgcccatatggtctgggtccaattgtcatcccta 5908791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 50508622 - 50508574
Alignment:
Q  35 tagtacccttacccgtgcccatacccatttaattttgtgggtattaccc 83  Q
    |||||||||||||| ||||||||| ||||||| || |||||||||||||    
T  50508622 tagtacccttacccatgcccatacacatttaaattcgtgggtattaccc 50508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 28956586 - 28956439
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||| |||||||| ||||||||    ||||||||||| ||| |||| ||||| ||||||| ||||    ||| ||||||||| ||| | |||||| |||     
T  28956586 tgggtagtatagtgcccttacctacacccatacccatctaaatttgcgggtaattacccggacccaagcccatacccataaatgtgaggttttaccctac 28956487  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattg 172  Q
    |||||| ||||||||||| |||||  |||| ||  |||||||||||||    
T  28956486 ccattgcgggtattttttacgggtgtccatcgggcctggatccaattg 28956439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 27346991 - 27347103
Alignment:
Q  52 cccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtac 150  Q
    ||||||||||||||| ||||||||| ||||||| ||||   | || ||||||| |||| ||| |||||| ||| |||| | || |||||||||||| |      
T  27346991 cccatacccatttaaatttgtgggtaattacccataccaaaacccggacccatgaaagcgggattttaccctacccatagcggatattttttgcggatgt 27347090  T
Q  151 ccattggatctgg 163  Q
    |||| ||||||||    
T  27347091 ccataggatctgg 27347103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 6e-65; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 33867300 - 33867139
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  33867300 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 33867201  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  33867200 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 33867139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 25425106 - 25425267
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  25425106 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 25425205  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  25425206 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 25425267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 4481407 - 4481567
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||     
T  4481407 gggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttacc 4481506  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  4481507 ctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 4481567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 3329513 - 3329675
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||| ||||||    
T  3329513 cgggtctgagcagtataatacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaaacgggattttac 3329612  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||| ||||||||||||||||||||| | ||||| | ||||||||||||||||    
T  3329613 cctacccattgtggatattttttgcgggtacccattaggtctgggttcaattgccatccctac 3329675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 31440399 - 31440239
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||  ||||||    
T  31440399 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccatgtccagacccataaaagcggagttttac 31440300  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
     ||| |||||||||||||||||||| ||||  |||| | ||| | ||||||||||||||||    
T  31440299 cctacccattgtgggtattttttgcaggtattcatttggtctaggtccaattgccatccct 31440239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 38620746 - 38620902
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||  |||||| |||     
T  38620746 ctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattatccgtacccgtgtccagacccataaaagcggtgttttaccctac 38620845  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||| ||| |||||||||||| || ||||||||||||| |||||||||||||||||    
T  38620846 ccattatggatattttttgcggatatccattggatctgggtccaattgccatcccta 38620902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 23232085 - 23232248
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | |||| | ||||||||| ||| ||||||    
T  23232085 cgggtctgggcagtatagtacccttacccgtgctcatatccatttaattttgtgggtattacccgtacccatgtccaaaaccataaaagcggggttttac 23232184  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
     ||| ||||||||| ||||| ||||||||| ||||||| ||||| |||||||||||||||||||    
T  23232185 cctacccattgtggatatttgttgcgggtatccattgggtctgggtccaattgccatccctacc 23232248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 13142334 - 13142173
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||| |||||     
T  13142334 cgggtctgggcagtatagtacccttacccgtgcccttgcccatttaattttgtgggtattacctgtacccgtgcccagacccataaaagcggggttttat 13142235  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||| ||||| | ||||  ||||| |||||||||||||||||    
T  13142234 cctacccattgtgggtattttttgtgggtatctattgagtctgggtccaattgccatcccta 13142173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 30241778 - 30241930
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||      ||| ||||||||||| ||| ||||||    
T  30241778 cgggtctgggcaatatagtacccttacccgtgctcatacccatttaattttgtgggtactacccgtac------ccaaacccataaaagcggggttttac 30241871  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
     ||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||    
T  30241872 cctatccattgtggctattttttgcgggtacccattgagtctgggtccaattgccatcc 30241930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 17961217 - 17961056
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||   |||||||||||||| ||| ||||||    
T  17961217 cgggtctgggcagtatagtacccttacccgtgcccgtacccatttaattttatgggtattacgcgtatccgtgctcagacccataaaagcggggttttac 17961118  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| | ||| |||||||||||||||| || ||||||  ||||| ||||||||| |||||||    
T  17961117 cctacctattatgggtattttttgcggatatccattgagtctgggtccaattgcaatcccta 17961056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 29155670 - 29155830
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||| |||||| |||| ||| ||||||    
T  29155670 cggggctgagcagtatagtacccttacccgtgcccatacccatttaaatttgtgggtattacccggacccgtgcccaaacccatgaaagcggggttttac 29155769  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
     ||| | ||  ||||||||||||||||| |||||| || ||||| || |||||||||||||    
T  29155770 cctacctatcatgggtattttttgcgggcacccatcgggtctgggtctaattgccatccct 29155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 32422497 - 32422409
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  32422497 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaag 32422409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 667731 - 667576
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatc 125  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||  |||||||||| | || ||| |||||| ||| |    
T  667731 tgggcagtatagtacccttacccgtgcccatacccatttaaattcgtggatattacccggacccgtccccagacccatgatagcggggttttaccctacc 667632  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||| |||| ||| |||||||  |||  |||||||||||||||||    
T  667631 cattgtgggtattttatgcgagtatccattgggcctgagtccaattgccatcccta 667576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 20937420 - 20937569
Alignment:
Q  32 gtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattgt 131  Q
    |||||||||||||||| |||  |||||||||| || |||||||||||||| || |||||| ||||||||||| |||| ||| ||||||  || |||||||    
T  20937420 gtatagtacccttacctgtgttcatacccattaaaatttgtgggtattactcggacccgtgtccagacccatgaaagcggggttttaccttacccattgt 20937519  T
Q  132 gggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    || |||||||||||| ||||||||| |  ||| |||||||||||||||||    
T  20937520 ggatattttttgcggatacccattgaacgtgggtccaattgccatcccta 20937569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 4290001 - 4290162
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||| || |||| ||||| |||||  |||||||  ||| | |||| |||| ||| |||||    
T  4290001 cggggctgggtagtatagtacc-ttacccgtgtccatacccattaaaatttgcgggtaattacc--tacccgtgcccatatccatgaaagcggggtttta 4290097  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  4290098 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 4290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 178
Target Start/End: Original strand, 2657222 - 2657357
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    |||||||| ||||||||||| |||||||  |||| ||| || | |||   ||| ||||||| |||||||| |||||| |||||||| |||| ||||||||    
T  2657222 tacccgtgtccatacccattcaattttgcaggtaattatccatgcccaagtccggacccatgaaagtggggttttaccctatccatagtggatatttttt 2657321  T
Q  143 gcgggtacccattggatctggatccaattgccatcc 178  Q
    |||||| ||||| |||||||| ||||||||||||||    
T  2657322 gcgggtgcccataggatctgggtccaattgccatcc 2657357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 4591950 - 4591796
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatc 125  Q
    ||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||  |||| |||  |||||||||||||||  |  ||||||  || |    
T  4591950 tgggcagtatagtacccttactcgtgctcattcccattaaaatttgtgggtattacatgtactcgtgcccagacccataaaagcagagttttac-gtacc 4591852  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||||||||||||||| | ||||||||| ||   ||| |||||||| ||||||||    
T  4591851 tattgtgggtattttttacaggtacccatcgggcttgggtccaattgtcatcccta 4591796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 15149982 - 15149826
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||| ||||||||| || ||| |||| |||||||||||||| || |  ||||||||||| ||||||  ||||| |||| | || ||| ||| || |||     
T  15149982 ctgggtagtatagtatccatactcgtgtccatacccatttaaattcgctggtattacccggacccgtccccagatccatgatagcggggtttcaccctac 15149883  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||| ||| |||||| |||||||| ||||||| ||||  |||||||| ||||||||    
T  15149882 ccattatggatattttatgcgggtatccattgggtctgagtccaattgtcatcccta 15149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 8027213 - 8027051
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| ||||||||| |||||||||  || |||||||||| ||| || |||||  || | ||||||| |||| ||  |||||    
T  8027213 cggggctgggtagtacagtgcccatacccgtgctcatacccatacaaatttgtgggtaattatccatacccaaattcggacccatgaaagcggagtttta 8027114  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| |||| | |||||||||||| ||||  |||| |||||||| |||||||||||||||||    
T  8027113 ccctacccatagcgggtattttttgtgggtgtccataggatctgggtccaattgccatcccta 8027051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 9205542 - 9205644
Alignment:
Q  79 tacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||||||| |||  ||| ||| ||||||| ||| |||||| ||| | |||||||||||||||||| | |||||||||||||||   |||||||||||||    
T  9205542 tacccgtactcgtgcccaaacctataaaagcggggttttaccctacctattgtgggtattttttgcagatacccattggatctgagcccaattgccatcc 9205641  T
Q  179 cta 181  Q
    |||    
T  9205642 cta 9205644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 15162370 - 15162504
Alignment:
Q  49 gtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcggg 147  Q
    |||||||||||||| ||| |||| ||||| |||||| |||||    || || |||| |||||||| |||||| ||| |||| | ||||||||||||||||    
T  15162370 gtgcccatacccatataaatttgcgggtaattacccatacccaagcccggatccatgaaagtgggattttaccctacccatagcgggtattttttgcggg 15162469  T
Q  148 tacccattggatctggatccaattgccatccctac 182  Q
    |  |||| |||||||| |||||||| |||||||||    
T  15162470 tgtccataggatctgggtccaattgtcatccctac 15162504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 29545731 - 29545575
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||| |||||||| ||| |||||||| || ||||| ||||| |||| ||||| ||||||  || | || ||| |||||| ||||||||  ||||| |||     
T  29545731 tgggtagtatagtgcccatacccgtgtccgtacccttttaagtttgcgggtaattacccagactcatacccatacccatgaaagtggggatttaccctac 29545632  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| ||||| ||||||||| ||||||| ||  |||| || ||||||||||||||    
T  29545631 ccattgcgggtaatttttgcggatacccatcgggcctgggtctaattgccatcccta 29545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 44070149 - 44070050
Alignment:
Q  79 tacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||| |||||||  ||| || |||||||| ||| |||||| ||| ||||| ||  ||||||||||||||||||||||  ||||| ||||||||||||||    
T  44070149 tacccttacccgtgcccatactcataaaagcgggattttaccctacccattatgaatattttttgcgggtacccattgtgtctgggtccaattgccatcc 44070050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 44070167 - 44070129
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatac 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44070167 cgggtctgggcagtatagtacccttacccgtgcccatac 44070129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 17249292 - 17249347
Alignment:
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    ||||||||||||||||||||||||||||||||||  ||| | |||||| |||||||    
T  17249292 ccattgtgggtattttttgcgggtacccattggacttgggttcaattgtcatccct 17249347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 15234477 - 15234531
Alignment:
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    ||||||||||||||||||||||||| ||||| |||  ||| ||||||||||||||    
T  15234477 tccattgtgggtattttttgcgggtgcccatcggacatgggtccaattgccatcc 15234531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 12345179 - 12345095
Alignment:
Q  97 gacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||| |||| ||| |||||| ||| |||| | ||||||||||||||||| ||||| |  | ||| |||||||||||||||||    
T  12345179 gacccatgaaagcggggttttaccctacccatagcgggtattttttgcgggtgcccatagagtttgggtccaattgccatcccta 12345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 10391377 - 10391228
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||| ||||||| ||| | ||||| ||| || |||| ||||| |||||| |||||||  ||| |||||| |||| ||  ||||||  || | |||    
T  10391377 agtatagtaaccttacc-gtgtctataccaattaaaatttgcgggtaattaccc-tacccgtgcccatacccatgaaagcggagttttacgttacctatt 10391280  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||||| ||  |||| |||||||| |||||||||||| ||||    
T  10391279 gtgggtattttttgcgagtgtccataggatctgggtccaattgccatgccta 10391228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 40474862 - 40474795
Alignment:
Q  115 tttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    ||||| |||||||||  |||||||||||||||||  |||| | |||||| |||||||| |||||||||    
T  40474862 tttaccctatccattacgggtattttttgcgggtgtccatcgaatctgggtccaattgtcatccctac 40474795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 7819819 - 7819869
Alignment:
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||||||| |||||||||  ||| |||||||| ||||||||    
T  7819819 tgggtattttttgcgggtgcccattggacttgggtccaattgtcatcccta 7819869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 16711098 - 16711057
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttg 71  Q
    |||||||||||||||||| ||| |||||||||||||| ||||    
T  16711098 cagtatagtacccttacctgtgtccatacccatttaaatttg 16711057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 35049126 - 35049175
Alignment:
Q  132 gggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||||| ||||| || | ||| |||||||||||||||||    
T  35049126 gggtattttttgcgggtgcccatagggtttgggtccaattgccatcccta 35049175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 38956705 - 38956629
Alignment:
Q  53 ccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||| ||||||||  |||||||||||||| | || |||||||| |||||| |||| ||| |||||| ||| |||||    
T  38956705 ccatatccatttaaacttgtgggtattacctggactcgtatccatacccatgaaagcgggattttaccctacccatt 38956629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 42970712 - 42970792
Alignment:
Q  97 gacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
    ||||||| ||||  || |||||| ||| |||| | |||||||||||||| || ||||| |||||||| |||||||| ||||    
T  42970712 gacccatgaaagcagggttttaccctacccatagcgggtattttttgcgagtgcccataggatctgggtccaattgtcatc 42970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 6867 - 6704
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||  ||||||    
T  6867 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgtccagacccataaaaacggagttttac 6768  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
     ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  6767 cctacccattgtggatattttttgcgggtacccattggagctgggtccaattgccatccctacc 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 14748 - 14585
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||  ||||||    
T  14748 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgtccagacccataaaaacggagttttac 14649  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
     ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  14648 cctacccattgtggatattttttgcgggtacccattggagctgggtccaattgccatccctacc 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 9e-64; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 46181572 - 46181731
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  46181572 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 46181671  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  46181672 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatccc 46181731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 16567926 - 16568087
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  16567926 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 16568025  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  16568026 cctacccattgtgggtattttttgcaggtatccattgggtctgggtccaattgccatcccta 16568087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 16597736 - 16597575
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  16597736 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 16597637  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  16597636 cctacccattgtgggtattttttgcaggtatccattgggtctgggtccaattgccatcccta 16597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 12920753 - 12920592
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  12920753 cgggtctgggcagtataatacccttacccgtgcccatactcatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 12920654  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  12920653 cctacccattgtgggtattttttgcgggtatccattggatctgggtctaattgccatcccta 12920592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 35092494 - 35092333
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||||||    
T  35092494 cgggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtaccctttcccagacccataaaagcggggttttac 35092395  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  35092394 cctacccattgtggatattttttgcaggtatccattggatctggattcaattgccatcccta 35092333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 39414924 - 39415085
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||||||| ||| ||||||    
T  39414924 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtggatattacccgtacccgtgctcagacccataaaagcggggttttac 39415023  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||    
T  39415024 gctacccattgtgggtattttttgcgggtatccattgggtctgggtctaattgccatcccta 39415085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 5022944 - 5022786
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  5022944 cgggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 5022845  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
     ||| ||||||||||||||||||  |||||||||||| |||||| || |||||||||||    
T  5022844 cctacccattgtgggtatttttttagggtacccattgaatctgggtctaattgccatcc 5022786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 31455251 - 31455412
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| | | ||||||    
T  31455251 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcgaggttttac 31455350  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||  |||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||    
T  31455351 cctactcattgtgggtattttttgcgggtatccattgggtctgggtccaattgtcatcccta 31455412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 19805385 - 19805543
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  19805385 cgggtctgggtagtatagtatccttacccgtgcccgtacccatttaattttgtggatattacccgtacccgtgcccagatccataaaagcgggattttac 19805484  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
     ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  19805485 cctatccattgtggatattttttgcgggtacccattggatttgggtccaattgccatcc 19805543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 27398947 - 27399109
Alignment:
Q  19 acgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||  ||||||||||||||| ||| |||||    
T  27398947 acgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttatgggtattatccgtatccgtgcccagacccataaaagcggggtttta 27399046  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| ||| |||||||||||||||||| || ||||||||| ||| |||||||||| ||||||    
T  27399047 ccctacccactgtgggtattttttgcggatatccattggatatgggtccaattgccgtcccta 27399109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 46783427 - 46783588
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||  ||||||||||||||| ||| |||||     
T  46783427 cgggtctggacagtatagtacccttacccgtgcccatatccatttaattttatgggtattacctgtacctgtgcccagacccataaaagcgggattttat 46783526  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||||||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  46783527 cctatccattgtgagtattttttgcggatacccattggatctgggtccaattgtcatcccta 46783588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 10066012 - 10065851
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||| |||| ||| ||||||    
T  10066012 cgggtctgggcagtatagtatccttatccgtgcccatacccattttattttgtgggtattacccgcacccgtgcccagacccatgaaagcggggttttac 10065913  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||||||||||| || |||| |||||  |||||||||||||||||    
T  10065912 cctacccattgtgggtattttttgcgggtgcctattgaatctgagtccaattgccatcccta 10065851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 43224677 - 43224838
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||| | |||| ||||||||||| | |||||  ||||||    
T  43224677 cggggctgggcagtatagtacccttatccgtgcccatatccatttaaattcgtgggtattacccgaatccgtctccagacccatgatagtggagttttac 43224776  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| ||| |||| ||||||||||||| |||||||| ||||||||    
T  43224777 cctacccattgtgggtattttatgcaggtatccattggatctgggtccaattgtcatcccta 43224838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 3551296 - 3551135
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||  ||| |||||| |||| ||| ||||||    
T  3551296 cggggctgggtagtatagtacccttacccgtgcccatacccatttaaatttgcgggtattacccagacccgtgcccaaacccatgaaagcggggttttac 3551197  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||||||| ||||||||| ||  |||| |||||||| ||||||||    
T  3551196 cctacccattgtgggtattttttgcaggtacccatcgggcctgggtccaattgtcatcccta 3551135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 3363320 - 3363455
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||  |||||| |||||||| ||  ||||||    
T  3363320 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttttgggtgttactcgtactcgtgcccagactcataaaagcggagttttac 3363419  T
Q  120 tctatccattgtgggtattttttgcgggtacccatt 155  Q
     ||||||||||||  |||||||||||||||| ||||    
T  3363420 cctatccattgtgaatattttttgcgggtactcatt 3363455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 33067237 - 33067074
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||   ||||||||| | || ||| ||||||    
T  33067237 cggggctgggcagtatagtacccttatccgtgcccatatccatttaaatttgtgggtattacccggacccgtcctcagacccatgatagaggggttttac 33067138  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
     ||| ||||| |||||||||| ||||||||  ||||||| |||| |||||||| ||||||||||    
T  33067137 cctacccattatgggtattttatgcgggtattcattggacctgggtccaattgtcatccctacc 33067074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 17171962 - 17171799
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  17171962 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 17171864  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  17171863 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 17171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 44301095 - 44301245
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| ||||| |  ||| |||||| |||||||| |||||| ||| |||||    
T  44301095 agtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccatt 44301193  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||| ||| ||||| || ||||| |||||||||||||||||    
T  44301194 gtgggtattttttgcaggtgcccatcgggtctgggtccaattgccatcccta 44301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 40788053 - 40787892
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || ||||  |||| |||||| ||||||| |||| |||||| |||| ||| |||||    
T  40788053 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgctggtaattaccc-tacccgtgtccatacccatgaaagcggggtttta 40787955  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| |||||||||||||||||||||||| ||||| || ||||  |||||||| ||||||||    
T  40787954 ccctacccattgtgggtattttttgcgggtgcccatcgggtctgagtccaattgtcatcccta 40787892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 43702154 - 43702004
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    |||||| |||| ||||||||||||||| |||||||| || |||||||||||||| ||||||  ||| |||||| | ||  || |||||| ||| ||||||    
T  43702154 agtataatacctttacccgtgcccatatccatttaaattcgtgggtattacccggacccgtccccaaacccatgatagcagggttttaccctacccattg 43702055  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||| |||||||| |||||| |  ||| || ||||||||||||||    
T  43702054 tgggtattttatgcgggtatccattgaacttgggtctaattgccatcccta 43702004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 42284864 - 42285025
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||| | || |  |||||||||| | || ||| ||||||    
T  42284864 cgggtctgggcagtatagtacccttatccgtgcccatgcccattaaaatttgtgggtattacccggatccatccccagacccatgatagcggggttttac 42284963  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||  ||||||| | |||||| || |||||  ||||||  |||| ||||| || ||||||||    
T  42284964 tctccccattgtagctattttatgtgggtattcattgggcctgggtccaaatgtcatcccta 42285025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 25309267 - 25309112
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||||||||||||||||||||   || ||||||||||||||| |||| ||||| |||||  ||||  | ||| |||||| |||| ||| ||||||||||     
T  25309267 ctgggcagtatagtacccttatatgtacccatacccatttaaatttgcgggtaatacccagacccaaacccatacccatgaaagcggggttttactctac 25309168  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    |||||||||||||||||| ||| ||||||| |    ||| ||||||||||||||||    
T  25309167 ccattgtgggtattttttacggatacccatcgagcttgggtccaattgccatccct 25309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 26299796 - 26299953
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||| ||| ||| |||||||||||||||||||  || |||| ||||| |||||| |||||    ||  |||||| |||||||| |||||  |||    
T  26299796 ctgggtagtacagtgcccatacccgtgcccatacccatacaaatttgcgggtaattacccatacccaagcccgaacccatgaaagtggggttttatccta 26299895  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||| | ||||||||||||| |||| |||| |||||||| |||||||||||||||||    
T  26299896 cccatagcgggtattttttgcaggtatccataggatctgggtccaattgccatcccta 26299953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 48558361 - 48558226
Alignment:
Q  46 cccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgc 144  Q
    |||||||| |||||||||||| |||| ||||| |||||| ||||| |  ||  |||||  |||| ||| |||||| |||||||| | || ||||||||||    
T  48558361 cccgtgcctatacccatttaaatttgcgggtaattacccatacccatgcccgtacccaagaaagcggggttttac-ctatccatagcggatattttttgc 48558263  T
Q  145 gggtacccattggatctggatccaattgccatcccta 181  Q
    |||| |||||||  ||||| |||||||||||||||||    
T  48558262 gggtgcccattgagtctgggtccaattgccatcccta 48558226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 5923507 - 5923349
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||||||||| |||||||| ||| ||||||||||| ||||| | ||| |||| |||| |||||||  |||| | ||||||||||||||||  |  |||||    
T  5923507 cgggtctgggtagtatagtgcccgtacccgtgcccgtacccgtgtaagtttgcgggtaattacccagacccatgtccagacccataaaagcagagtttta 5923408  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    |     |||||| || | |||||||| |||| |||| || ||||| ||||||||||||||||||    
T  5923407 c-----ccattgcggattttttttgcaggtatccatcgggtctgggtccaattgccatccctac 5923349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 12499310 - 12499151
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||  || |||||||||||||||||||  || |||| ||||| |||||| |||||    |||||||||| |||| ||| |||||    
T  12499310 cggggctgggtagtatagtgtccatacccgtgcccatacccatacaaatttgcgggtaattacccatacccaagcccagacccatgaaagcgggatttta 12499211  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    |  || |||| | ||||||||||||| |||  |||| || ||||| ||||||||||||||    
T  12499210 ccatacccatagcgggtattttttgcaggtgtccatagggtctgggtccaattgccatcc 12499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 24430069 - 24429916
Alignment:
Q  28 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatcca 127  Q
    ||||||| |||||  |||||||| ||||||||||||||| ||||  |||| ||| |  ||||  | | | ||||||||||| ||| |||||| |||| ||    
T  24430069 ggcagtacagtacttttacccgtacccatacccatttaaatttgcaggtaatactcagacccaaacctaaacccataaaagcggggttttaccctattca 24429970  T
Q  128 ttgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||  |||||||||||| | ||||||| |  ||| | |||||||||||||||||    
T  24429969 ttgcaggtattttttgcagatacccatcgagtctaggtccaattgccatcccta 24429916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 9477920 - 9478082
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtatta------cccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| |||| ||||||||||||||||||||||| | |||||| || |||| |||||      ||||| |||||  |||||||||| | || ||| ||||     
T  9477920 ctggacagtgtagtacccttacccgtgcccatatcaatttaaattcgtggctattacccgtccccgtccccgtccccagacccatgatagcggggttttt 9478019  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| ||||||||| |||||| || ||||| ||| |||  |||| |||||||| ||||||||    
T  9478020 ccctacccattgtggatattttatgtgggtatccactgggcctgggtccaattgtcatcccta 9478082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 28066946 - 28066811
Alignment:
Q  49 gtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcggg 147  Q
    ||||||||| |||||||| |||| || || |||||| |||||  | || |||| || |||| ||| |||||| ||| |||| | ||||||||||||||||    
T  28066946 gtgcccatatccatttaaatttgcggataattacccatacccaaacccggacctatgaaagcggggttttaccctacccatagcgggtattttttgcggg 28066847  T
Q  148 tacccattggatctggatccaattgccatccctacc 183  Q
    | ||||| || ||||| ||| |||| ||||||||||    
T  28066846 tgcccatagggtctgggtcctattgtcatccctacc 28066811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 36073088 - 36073240
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    |||||||| ||| ||||||||||  ||||| ||||| |||| ||||| ||||||| | || |  ||| | |||| |||| ||| |||||| ||| |||||    
T  36073088 agtatagtgcccatacccgtgccggtacccttttaaatttgcgggtaattacccgaatccatgcccatatccatgaaagcggggttttaccctacccatt 36073187  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
      ||||||||||||||| | |||||  || |||| || |||||||||||||||    
T  36073188 acgggtattttttgcggatgcccatcagacctgggtctaattgccatccctac 36073240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 9224041 - 9224200
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| || |||||||||||||||| ||| |||| ||||| ||| || |||||    ||  ||||||||||| ||| |||||    
T  9224041 cggggctgggtagtacagtgcccatatccgtgcccatacccatataaatttgcgggtaattatccatacccaagcccgaacccataaaagcggggtttta 9224140  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    | ||| |||| | || |||||||||| ||| ||| | || ||||| ||||||||||||||    
T  9224141 ccctacccatagcggatattttttgcaggtgcccttagggtctgggtccaattgccatcc 9224200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 36073700 - 36073633
Alignment:
Q  114 ttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| ||| ||||||||||||||||||||||||  |||| ||| |||| |  ||||||||||||||    
T  36073700 ttttaccctacccattgtgggtattttttgcgggtgtccatcggacctgggtataattgccatcccta 36073633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 33979257 - 33979395
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    ||||||||| ||||||||| ||| |||| ||||| |||||| |||||    || || |||| |||| | | |||||| ||| |||  | |||||||||||    
T  33979257 tacccgtgcacatacccatataaatttgcgggtaattacccatacccaagcccggatccatgaaagcgtggttttaccctacccaaagcgggtatttttt 33979356  T
Q  143 gcgggtacccattggatctggatccaattgccatcccta 181  Q
    || ||| ||||| || ||||| |||||||||||||||||    
T  33979357 gcaggtgcccatagggtctgggtccaattgccatcccta 33979395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 21154935 - 21154996
Alignment:
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    |||||||| | ||||||||||||||||| || |||| || ||  ||||||||||||||||||    
T  21154935 ctatccatagcgggtattttttgcgggtgcctattgaatttgagtccaattgccatccctac 21154996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 45116281 - 45116358
Alignment:
Q  77 attacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccat 154  Q
    |||||||| |||| || ||| | |||| |||| ||| |||||| |||||||||| ||||||||||| ||||| |||||    
T  45116281 attacccggacccatacccatatccatgaaagcggggttttaccctatccattgcgggtattttttacgggtgcccat 45116358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 25047405 - 25047473
Alignment:
Q  114 ttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    |||||| ||| ||||||  |||||||||||||||| ||||||||  ||||||| ||| | |||||||||    
T  25047405 ttttaccctacccattgcaggtattttttgcgggtgcccattgggcctggatctaatcgtcatccctac 25047473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 9222595 - 9222757
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||    
T  9222595 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttac 9222694  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  9222695 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatccctac 9222757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 13313087 - 13313248
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||| ||||||    
T  13313087 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccagaaaagcggggttttac 13313186  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  13313187 cctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 13313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 25815088 - 25814927
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  25815088 cgggtctgggcagtatagtacccttacccgtgtccatacccatttaattttgtgggtattacccgtacccgtacccagacccataaaagcggggttttac 25814989  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  25814988 cctacccattgtggatattttttgcgggtatccattggatctgggtctaattgccatcccta 25814927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 35978264 - 35978103
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  35978264 cgggtctgggcagtatagtaccattacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcgggattttac 35978165  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||  ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  35978164 cctacccattgtgaatattttttgcgggtacccattgggtctgggtccaattgccatcccta 35978103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 29054360 - 29054199
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||    
T  29054360 cgggtttgggcagtatagtacccttacccgtgcccatgcccatttaattttgtgggtattatccgtacccgtacccagacccataaaagcggggttttac 29054261  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||| |||||||||||||||||| |||||||| ||| |||||||| ||||||||    
T  29054260 cctacccattgtaggtattttttgcgggtactcattggatatgggtccaattgtcatcccta 29054199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 27783852 - 27784014
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| | ||||||||| ||| ||||||    
T  27783852 cgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccatgtccaaatccataaaagcggggttttac 27783951  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  27783952 cctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatccctac 27784014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 424924 - 425081
Alignment:
Q  24 tctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||    
T  424924 tctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccggacccgtacccagacccataaaagtgggattttacccta 425023  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
      |||||||| |||||||| |||||||||||| ||||||| |||| ||| ||||||||    
T  425024 ctcattgtggatattttttacgggtacccattagatctgggtccagttgtcatcccta 425081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 42068882 - 42068720
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| |||  |||   ||||||||| ||| ||||||    
T  42068882 cgggtctgggcagtatagtacccttacccgtgtacatatccatttaattttgtgggtattacccgtactcgtgcccaagtccataaaagcggggttttac 42068783  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  42068782 cctacccattgtgggtattttttgcgggtacccattggatttgggtccaattgccatccctac 42068720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 44327687 - 44327527
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||  ||||||    
T  44327687 cgggtctgggcaatatagtaccattacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggagttttac 44327588  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||||||| |||| ||||||| |||||  ||||||||||||||||    
T  44327587 cctacccattgtgggtattttttgc-ggtatccattgggtctgggcccaattgccatcccta 44327527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 43634292 - 43634132
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||  ||||||    
T  43634292 cgggtctaggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgtccagacctataaaagcggagttttac 43634193  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||  | | |||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  43634192 cctgcctaatgtgggtattttttgc-ggtatccattggatctgggtccaattgccatcccta 43634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 28221319 - 28221481
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||| | || ||| ||||||    
T  28221319 cggggctgggcagtatagtacccttactcgtgcccatacccatttaaatttgtgggtattacccggacccgtccccagacccatgatagcggggttttac 28221418  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| ||||||||| |||||| |||||||| |||||||  |||| ||||||||||||||||||    
T  28221419 cctacccattgtggctattttatgcgggtatccattgggcctgggtccaattgccatccctac 28221481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 48964123 - 48963968
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |      ||||||||||||||| ||| ||||||    
T  48964123 cgggtctgggcagtatagtacccttacctgtgcccatacccatttaattttgtgggtattacccgtgc------ccagacccataaaagcggggttttac 48964030  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| || |||||| ||||||||||||||||||||| |||||   |||||||||||||||||    
T  48964029 cctaccctttgtggatattttttgcgggtacccattcgatctaagtccaattgccatcccta 48963968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 19506735 - 19506896
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||| || || |||||||||||||| ||||||  |||||||||| | || ||| ||||||    
T  19506735 cggggctgggcagtatagtatccttatccgtgcccatacccattaaaattcgtgggtattacccggacccgtccccagacccatgatagcggggttttac 19506834  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||||||||||||||||||| |||||||| |||||||  |||| |||||||||||||||||    
T  19506835 cctatccattgtgggtattttatgcgggtatccattgggcctgggtccaattgccatcccta 19506896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 236867 - 237027
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||| |||||| |||| ||| ||||||    
T  236867 cggggctgggtagtatagtaaccttacccgtgcccatacccatttaaatttgtgggtattacccggacccgtgcccaaacccatgaaagcggggttttac 236966  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
     ||| ||||||||||||||||||||||||| |||| ||   ||| ||||||||||||||||    
T  236967 cctacccattgtgggtattttttgcgggtaaccatcgggcttgggtccaattgccatccct 237027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 2978769 - 2978930
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| || || |||||||||| ||| ||||||  |||||||||| | || ||| ||||||    
T  2978769 cggggctgggcagtatagtacctttacccgtgcccatacccattaaaattcgtgggtattatccggacccgtccccagacccatgatagcggggttttac 2978868  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||||||||| |||||||||| ||||| || |||||||| |||| |||||||||||||||||    
T  2978869 cctatccattatgggtattttatgcggttatccattggacctgggtccaattgccatcccta 2978930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 20415331 - 20415493
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| |||| ||||||| |||||||  ||| |||||| |||| ||| |||||    
T  20415331 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatacccatgaaagcggggtttta 20415429  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    | ||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  20415430 ccctacccattgtgggtattttttgcgggtgcccatcggatctgggtccaattgccatccctac 20415493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 33794162 - 33794012
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |      ||| ||||||||||| ||  ||||||    
T  33794162 cgggtttgggcagtatagtactcttacccgtgccc-tacccatttaattttgtgggtattacccgtgc------ccatacccataaaagcggagttttac 33794070  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
     ||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  33794069 cctatccattgtgggtatttttggcgggtacccattgggtctgggtccaattgtcatc 33794012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 38491778 - 38491930
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||| |  ||| |||||| | ||| || |||||| |||     
T  38491778 ctgggcagtatagtacccttacccgtgcccatatccatttaaattcgtgggtattacccggacccttccccatacccatgatagtagggttttaccctac 38491877  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatc 177  Q
    |||||||||||||||| |||||||| ||||||| | ||| |||||||||||||    
T  38491878 ccattgtgggtattttatgcgggtatccattgggtatgggtccaattgccatc 38491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 945832 - 945993
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||| |||||||||  ||||||||||||||||||||||||| || || |||||||||||||| ||||||  |||||||||| | || ||| ||||||    
T  945832 cgggtctaggcagtataagacccttacccgtgcccatacccattaaaattcgtgggtattacccggacccgtccccagacccatgatagcggggttttac 945931  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||| ||||||||| |||||| || ||||| |||||||  |||| | |||||| ||||||||    
T  945932 tctacccattgtggatattttatgtgggtatccattgggcctgggttcaattgtcatcccta 945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 2433563 - 2433724
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| |||||| |||||||||||||||||||||||||   | ||||||||||||| ||| |||| | |||| || ||| |||  ||| |||||     
T  2433563 cgggcctgggtagtataatacccttacccgtgcccatacccataacaatttgtgggtattatccggacccatgtccatactcatgaaaacgggattttat 2433662  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  2433663 cctacccattgtgggtattttttgcgggtatccattgggtctggatccaattgtcatcccta 2433724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 4893036 - 4892873
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  4893036 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 4892938  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  4892937 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 4892873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 29185451 - 29185614
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| |||| ||||||| |||||||  ||| | |||| |||| ||| |||||    
T  29185451 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 29185549  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  29185550 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 29185614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 33362639 - 33362476
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  33362639 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 33362541  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
      ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  33362540 tcctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 33362476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 32835267 - 32835105
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| | ||||||  |||||||||| | || ||  ||||||    
T  32835267 cggggctgggcagtatagtacccttacccgtgcctatatccatttaaattcgtgggtattacctggacccgtccccagacccatgatagcggagttttac 32835168  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||| |||||||||||||||| ||| ||||  ||||||  || | | |||||| |||||||||    
T  32835167 cctacccattgtgggtattttatgcaggtattcattgggcctaggttcaattgtcatccctac 32835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 25059455 - 25059615
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactc 121  Q
    |||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||| | |||| |  ||  |||||| | || ||| |||||| |    
T  25059455 ggtctgggcagtatagtacccttacccgtgcccatatccattaaaattcgtgggtattacctggacccatccccgaacccatgatagcggggttttaccc 25059554  T
Q  122 tatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    || ||||||| |||||||| || | ||| ||||||   |||| ||||||||||||||||||    
T  25059555 tacccattgtaggtattttatgtgagtatccattgagcctgggtccaattgccatccctac 25059615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 21260494 - 21260345
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||||| |||||||||||||||||||||||| || |||||||||| ||| ||||||  ||||| |||| | |  ||| |||||| ||| |||| |    
T  21260494 agtatagtacctttacccgtgcccatacccatttaaattcgtgggtattatccggacccgtccccagatccatgataacggggttttaccctacccatcg 21260395  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    | |||||||| ||||||||  ||||||  |||| ||||||| ||||||||    
T  21260394 taggtattttatgcgggtattcattgggcctgggtccaattcccatccct 21260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 2975003 - 2974841
Alignment:
Q  19 acgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    ||||| |||| |||||||||||  ||||||||||||||||||||| || || ||| |||||||||| ||||||  ||| ||| || | |  ||| |||||    
T  2975003 acggggctggacagtatagtacatttacccgtgcccatacccattaaaattcgtgtgtattacccggacccgtccccaaacctatgataacgggatttta 2974904  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| ||||| ||  |||||| |||||||| |||||||| |||  |||||||||||||||||    
T  2974903 cgctacccattatgaatattttatgcgggtatccattggacctgagtccaattgccatcccta 2974841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 32133875 - 32134033
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||| ||| ||| ||||||||||||||||||  ||| |||| ||||| |||||| |||||   ||| ||||||| |||| ||| |||||| |||    
T  32133875 ctgggtagtacagtgcccatacccgtgcccatacccaaataaatttgcgggtaattacccatacccaagtccggacccatgaaagcggggttttacccta 32133974  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     |||||| || |||||||||||||| ||||| || ||||| |||||||| |||||||||    
T  32133975 cccattgcggatattttttgcgggtgcccatagggtctgggtccaattgtcatccctac 32134033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 7842907 - 7843068
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||| |||||||||||||||||| |||||||| | |||||||| || |||||||||| | | ||||||   ||||||||| | |||| | ||||||    
T  7842907 cggggctgagcagtatagtacccttactcgtgcccaaatccatttaaattcgtgggtattatctgaacccgtcctcagacccatgatagtgaggttttac 7843006  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||| || ||||||| |||||||| |||||| |  ||  |||||||||||||||||    
T  7843007 cctacccattatgagtattttgtgcgggtatccattgaacatgagtccaattgccatcccta 7843068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 19494749 - 19494908
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||||| ||| ||||||||||  ||||| ||||| |||| ||||| ||||||| |||| | ||||||||||| |||| ||| |||||    
T  19494749 cggggctgggtagtatagtgcccatacccgtgcctgtacccttttaagtttgcgggtaattacccggacccatgtccagacccatgaaagcgggatttta 19494848  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
    | ||| |||||| || | ||||||| ||||| |||| ||| |||| |||||||||||||||    
T  19494849 ccctacccattgcggtt-ttttttgtgggtatccatcggacctgggtccaattgccatccc 19494908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 35659894 - 35660018
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    |||||||  ||||||| ||||||||||| | |||||| ||||||||||||| ||| |||||| | ||||||||| |||| ||  |||||||||||| |||    
T  35659894 cagtataacacccttatccgtgcccatatctatttaaatttgtgggtattatccgcacccgtgttcagacccatgaaagcggagttttactctatctatt 35659993  T
Q  130 gtgggtattttttgcgggtacccat 154  Q
    |||  |||||||||| || ||||||    
T  35659994 gtgaatattttttgcaggcacccat 35660018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 19996427 - 19996353
Alignment:
Q  29 gcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccat 103  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||||||  ||||||||||    
T  19996427 gcagtatagtactcttacccgtgtccatacccatttaaatttgtgggtaatacccgaacccgtccccagacccat 19996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 39027147 - 39027285
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    ||||||||||||||||||| ||| |||| | ||| |||||| |||||   ||| ||||||| |||| ||| |||||| ||| |||| | |||||||||||    
T  39027147 tacccgtgcccatacccatataaatttgcgagtaattacccatacccaagtccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 39027246  T
Q  143 gcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| ||||| |  ||||| |||||||||||||||||    
T  39027247 gcgggtgcccatagagtctgggtccaattgccatcccta 39027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 35738690 - 35738552
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    ||||||||||||||||||| ||| |||| ||||| |||||| |||||    || | ||||| |||| ||| |||||| ||| |||| | |||||||||||    
T  35738690 tacccgtgcccatacccatataaatttgcgggtaattacccatacccaagcccggccccatgaaagcggggttttaccctacccatagcgggtatttttt 35738591  T
Q  143 gcgggtacccattggatctggatccaattgccatcccta 181  Q
    || ||| ||||| || ||||| |||||||||||||||||    
T  35738590 gcaggtgcccatagggtctgggtccaattgccatcccta 35738552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 28192193 - 28192036
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||| ||| ||| |||| || ||||||||||| ||| |||  ||||| ||| || |||||   ||| ||||||| |||| ||| |||||| |||    
T  28192193 ctgggtagtacagtgcccatacctgtacccatacccatataaatttacgggtaattatccatacccaagtccggacccatgaaagcggggttttacccta 28192094  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     |||| |||||||||||||||||||  |||| || ||||| |||||||||||||||||    
T  28192093 cccatagtgggtattttttgcgggtgtccatagggtctgggtccaattgccatcccta 28192036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 30490025 - 30490173
Alignment:
Q  33 tatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgt 131  Q
    ||||||| |||||||||   |||||||||| ||| |||| ||||| ||||||| ||||    ||| ||||||||||| ||| ||| || ||| | |||||    
T  30490025 tatagtatccttacccgcatccatacccatctaaatttgcgggtaattacccggacccaagcccatacccataaaagcggggttt-accctacctattgt 30490123  T
Q  132 gggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||||||||| ||||| | | |||| |||||||||||||||||    
T  30490124 gggtattttttgcgggtgcccatcgaacctgggtccaattgccatcccta 30490173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 14106675 - 14106826
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||| |||  |||||||||||| || |||| ||||| ||||||| ||||    ||| || ||| |||| ||| |||||| ||| |||||    
T  14106675 agtatagtacccttatccgcacccatacccattaaaatttgcgggtaattacccggacccaagcccatactcatgaaagcggggttttaccctacccatt 14106774  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | |||  ||||||||||||  |||| ||| |||| |||||||||||||||||    
T  14106775 gcggggtttttttgcgggtgtccataggacctgggtccaattgccatcccta 14106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 7815253 - 7815413
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| ||||||||| |||||||||  |||||||||||| || |||| ||  |||||||| ||||  |  || | ||||||||| ||  ||||||    
T  7815253 cggggctgggaagtatagtatccttacccgcacccatacccatt-aagtttgcggtaattacccggacccaaactcatatccataaaagcggagttttac 7815351  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||  ||||||||||||| ||  ||||||| ||||| |||||||| ||||||||    
T  7815352 cctacccattgcaggtattttttgcgagtgtccattgggtctgggtccaattgtcatcccta 7815413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 181
Target Start/End: Original strand, 10786562 - 10786713
Alignment:
Q  30 cagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||| ||| |||  ||| || |||   |||| |||||  |||| || |||||| ||| ||||  |   ||||| ||| |||||    
T  10786562 cagtatagtacccttacccgtacccttacttattcaaatttacaggtaatacccagacccatacccagactcatgaaagcagagctttaccctacccatt 10786661  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |  ||||||| |||||||||||||| ||| |||| |||||||||||||||||    
T  10786662 gcaggtatttgttgcgggtacccatcggacctgggtccaattgccatcccta 10786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 12560332 - 12560251
Alignment:
Q  100 ccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||  ||| |||||| ||| | ||| ||| |||||||| |||||||||||||| ||| | |||||||||||||||||    
T  12560332 ccataaaaacgggattttaccctacctattatggatattttttacgggtacccattgggtctaggtccaattgccatcccta 12560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 13796817 - 13796753
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatcca 96  Q
    ||||||||||| ||||||||||||||||||||   | ||||||||||||||||| |||||| ||||    
T  13796817 agtatagtacc-ttacccgtgcccatacccataacagtttgtgggtattacccggacccgtgtcca 13796753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 29511909 - 29511828
Alignment:
Q  100 ccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||| || |||||| ||| ||||||||||||||||||||||||  | || | | ||||||| ||||| ||||||||    
T  29511909 ccataaaagtaggattttaccctaaccattgtgggtattttttgcgggtctctatcgaacctggatctaattgacatcccta 29511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 47665775 - 47665907
Alignment:
Q  50 tgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggt 148  Q
    ||||||||||||| |||||||| ||||| |||||| |||||    || ||||||| |||| ||  |||||| ||| |||| | |||||||||||| ||||    
T  47665775 tgcccatacccatataattttgcgggtaattacccatacccaagcccggacccatgaaagcggtattttaccctacccatagcgggtattttttgtgggt 47665874  T
Q  149 acccattggatctggatccaattgccatcccta 181  Q
     |||||  | | ||| |||||||||||||||||    
T  47665875 gcccataaggtttgggtccaattgccatcccta 47665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 3191839 - 3191784
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta 77  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  3191839 ggtctgggtagtatagtacccttacccgcgcccatatccattaaaatttgcgggta 3191784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 3200657 - 3200602
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta 77  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  3200657 ggtctgggtagtatagtacccttacccgcgcccatatccattaaaatttgcgggta 3200602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 3209494 - 3209439
Alignment:
Q  22 ggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta 77  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  3209494 ggtctgggtagtatagtacccttacccgcgcccatatccattaaaatttgcgggta 3209439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 16176670 - 16176603
Alignment:
Q  114 ttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||| |||||  || ||||||||||||||  ||||||| | |||||||||||| ||||||||    
T  16176670 ttttactctacccattacggatattttttgcgggtgtccattgggtttggatccaattgtcatcccta 16176603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 48514915 - 48514994
Alignment:
Q  100 ccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
    |||| |||| ||| |||||| |||||||| | || ||||||||||||||  | || ||||||||||||||||| ||||||    
T  48514915 ccatgaaagcggggttttaccctatccatagcggatattttttgcgggtgtctataggatctggatccaattgtcatccc 48514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 31071141 - 31071302
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||| ||||||    
T  31071141 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccacaaaagcggggttttac 31071240  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  31071241 cctacccattgtgggtattttttgcgggtacccattgggtttgggtccaattgccatcccta 31071302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 1329319 - 1329158
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1329319 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttatgggtattacccgtacccgtgtccagacccataaaagtggggttttac 1329220  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||  | ||| | |||||||||||||||    
T  1329219 cctacccattgtgggtattttttgcgggtatccattgagtatgggttcaattgccatcccta 1329158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 33328949 - 33329110
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||| ||||||     
T  33328949 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttttgggtattacccgtacccgtgcccagacccataaaagcggggttttacc 33329048  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    ||| ||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  33329049 ctacccattatgggtattttttgcgggtatccattgggtctgggtccaattgccatccctac 33329110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 33331960 - 33332121
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  33331960 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttttgggtattacccgtacccgtgcccagacccataaaagcggggttttac 33332059  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  33332060 cctacccattatgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 33332121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 31783752 - 31783600
Alignment:
Q  28 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatcca 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| |||||| |||   |    
T  31783752 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccatgcccagacccataaaagcggggttttaccctactaa 31783653  T
Q  128 ttgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  31783652 ttgtgggtat-ttttgcgagtacccattggatctggatccaattgtcatcccta 31783600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 20691338 - 20691177
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||  |||||||||||||||  || ||||||    
T  20691338 cgggtctgggcagtatagtacccttacccgtgcccatacccattttattttgtgtttattacccgcacccgtgcccagacccataaaagcagggttttac 20691239  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||| || | |||||||||||||  |||||||| ||||||||    
T  20691238 cctacccattgtgggtattttttgtggatgcccattggatctgagtccaattgtcatcccta 20691177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 34 - 178
Target Start/End: Complemental strand, 29640506 - 29640361
Alignment:
Q  34 atagtacccttacccgtgcccatacccatttaa-ttttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtg 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||   |||||| ||||||| ||| |||||| ||| ||||||||    
T  29640506 atagtacccttacccgtgcccatacccatttaaattttgtgggtattatccgtacccgtgctcagacctataaaagcggggttttaccctacccattgtg 29640407  T
Q  133 ggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||    
T  29640406 gatattttttgcgggtacccattgggtctggatccaattgccatcc 29640361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 13532685 - 13532529
Alignment:
Q  26 tgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatc 125  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||  ||||||| ||||||| ||| |||||| ||| |    
T  13532685 tgggcagtatagtacccttacccgtgcccatatccatttaattttgtggatattatccgtacccgtgcccagacctataaaagcggggttttaccctacc 13532586  T
Q  126 cattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
     ||||||||||||||||||||||| ||||||| ||||| || ||||| |||||||||    
T  13532585 aattgtgggtattttttgcgggtatccattgggtctgggtctaattgtcatccctac 13532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 7808120 - 7808278
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||||| ||||||||||| | || ||| |||||| |||     
T  7808120 ctgggcagtatagtacccttacccgtgcccatacccatttaaattcgtgggtattatccgaacccgtctccagacccatgatagcgggattttaccctac 7808219  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    ||||||||| |||||| ||||||||  ||||| |  ||| |||||||||||||||||||    
T  7808220 ccattgtggatattttatgcgggtattcattgaacatgggtccaattgccatccctacc 7808278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 178
Target Start/End: Complemental strand, 31510676 - 31510531
Alignment:
Q  34 atagtacccttacccgtgcccatacccatttaa-ttttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtg 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||   |||||| ||||||| ||| |||||| ||| ||||||||    
T  31510676 atagtacccttacccgtgcccatacccatttaaattttgtgggtattatctgtacccgtgctcagacctataaaagcggggttttaccctacccattgtg 31510577  T
Q  133 ggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    | ||||||||||||||||||||||  ||||| | ||||||||||||    
T  31510576 gatattttttgcgggtacccattgcgtctgggtacaattgccatcc 31510531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 6337550 - 6337706
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||| |||||| |||||||||||||||||||||||||   | ||||||||||||||||  |||| | |||| |||||| |||| ||| |||||| |||     
T  6337550 ctgggtagtataatacccttacccgtgcccatacccataacaatttgtgggtattacccagacccatgtccatacccatgaaagcggggttttaccctac 6337649  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||    
T  6337650 ccattgtgggttttttttgcgggtatccattgggtctggatccaattgtcatcccta 6337706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 1221456 - 1221293
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  1221456 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 1221358  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  1221357 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 1221293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 24446863 - 24446700
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  24446863 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 24446765  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  24446764 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 24446700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 28770143 - 28770303
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||  ||||| |||||||||||||| ||| || |||| ||| || |||| ||| ||||||    
T  28770143 cggggctgggtagtatagtacccttacccgtgtccatacccataaaattt-gtgggtattacccggacctgtgtccatacctatgaaagcgggattttac 28770241  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
      || ||||||||| |||||||||||||||  |||||| | ||| |||||||||||||||||    
T  28770242 catacccattgtggatattttttgcgggtattcattgggtttgggtccaattgccatcccta 28770303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 9061830 - 9061692
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    ||||||||||||||||||| ||| |||| ||||| |||||| |||||  | || ||||||| |||| ||| |||||| ||| |||| | |||||||||||    
T  9061830 tacccgtgcccatacccatataaatttgcgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 9061731  T
Q  143 gcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||| ||||| |||||||| |||||||||||||||||    
T  9061730 gcgggtgcccataggatctgggtccaattgccatcccta 9061692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 33959881 - 33959732
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccatt 129  Q
    ||||||||||||||||||||  ||||| ||||| || ||||  |||| ||| || |||||||| ||| |||||| |||||||  |||||| |||| ||||    
T  33959881 agtatagtacccttacccgtatccatatccattaaaatttgcaggtaattatcc-tacccgtacccatacccatgaaagtggagttttaccctattcatt 33959783  T
Q  130 gtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
    ||||| ||||||||| ||| || ||  | ||||| || |||||||||||||    
T  33959782 gtggggattttttgcaggtgcctatcaggtctgggtcgaattgccatccct 33959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 12429783 - 12429908
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||||||||| ||||||||||||| |||||| || || ||||||||||  | || | |||||||||||   ||   | ||||||||||  |||||    
T  12429783 agtatagtacccttatccgtgcccatacctatttaaattcgttggtattacccagatccatctccagacccatggtagcatgattttactctactcattg 12429882  T
Q  131 tgggtattttttgcgggtacccattg 156  Q
    ||| |||||| ||| |||| ||||||    
T  12429883 tggatattttatgcaggtatccattg 12429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 6799039 - 6798989
Alignment:
Q  132 gggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    ||||||||||||||| | ||||| | |||||||||||||| ||||||||||    
T  6799039 gggtattttttgcggatgcccatagaatctggatccaattaccatccctac 6798989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 19045619 - 19045665
Alignment:
Q  102 ataaaagtgggcttttactctatccattgtgggtattttttgcgggt 148  Q
    ||||||||||| |||||||||| ||||||| |||||||||| |||||    
T  19045619 ataaaagtggggttttactctacccattgtaggtattttttacgggt 19045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 14088621 - 14088782
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  14088621 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttac 14088720  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||| |||||||||||||||||||||| ||||| || |||||||| |||||    
T  14088721 cctacccattgtgggcattttttgcgggtacccattgggtctgggtcaaattgccaacccta 14088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 41616929 - 41617090
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||| ||| |||||     
T  41616929 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgcgagtattacccgtacccgtgaccagacccataaaagcggggttttat 41617028  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41617029 cctacccattgtgggtattttttgcgggtatccattgggtctggatccaattgccatcccta 41617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 14645670 - 14645830
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||| ||||||     
T  14645670 gggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttacc 14645769  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  14645770 ctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 14645830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 15718946 - 15718791
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||||||| ||||||    
T  15718946 cgggtctgggcagtatagtacccttacccgtgtccatacccatttaattttgtgggtattacccgtacccg------gacccataaaagtggggttttac 15718853  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||||||||||||||||||| |||||| |||| | |||||||||||||||||    
T  15718852 cctacccattgtgggtattttttgcgggtatccattgaatctaggtccaattgccatcccta 15718791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 1061314 - 1061476
Alignment:
Q  21 gggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttact 120  Q
    ||||||||||| |||||||| ||||  |||| |||||||||||||||||||| ||||||||||||||||||   ||||| |||||||||||| |||||      
T  1061314 gggtctgggcaatatagtactcttattcgtgtccatacccatttaattttgtaggtattacccgtacccgtgctcagactcataaaagtggggttttatc 1061413  T
Q  121 ctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    ||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  1061414 ctacccattgtgggtattttttgcgggtacctattgaatctgggtccaattgccatccctacc 1061476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 31149452 - 31149296
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || | |  |||||||||| | ||  || |||||| ||||    
T  31149452 ctgggcagtatagtacccttacccgtgcccatactcatttaaatttgtgggtattacccggactcattcccagacccatgatagcagggttttaccctat 31149353  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||||| | |||||| ||||||| ||||| |||||||| ||||||||    
T  31149352 ccattgtgggtattttatacgggtatccattgggtctgggtccaattgtcatcccta 31149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 7978384 - 7978545
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| || |||  |||||||||| | || ||| ||||||    
T  7978384 cggggctgggcagtatagtacccttatccgtgcccatatccatttaaatttgtgggtattacccggactcgtccccagacccatgatagcggggttttac 7978483  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| |||||||||||||||| |||||||| | |||||  |||| |||||||| ||||||||    
T  7978484 cctacccattgtgggtattttatgcgggtatcaattgggcctgggtccaattgtcatcccta 7978545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 18595718 - 18595874
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||| ||||| ||| ||||||  |||||||||| | || ||| |||||  |||     
T  18595718 ctgggcagtatagtacccttacccgtgctcatacccatttaaattcgtggatattatccggacccgtccccagacccatgatagcgggattttatcctac 18595817  T
Q  125 ccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||| ||||||| |||||||| |||||||  |||| |||||||||||||||||    
T  18595818 ccattgtgagtattttatgcgggtatccattgggcctgggtccaattgccatcccta 18595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 14088016 - 14088159
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| ||||||  ||| |||||| | || ||| ||||||    
T  14088016 cggggctgggcagtatagtacccttacccgtacccatacccatttaaattcgtgggtattacccggacccgtccccatacccatgatagcggggttttac 14088115  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctgg 163  Q
     |||||||| ||||||||||| |||||| | ||||||| |||||    
T  14088116 cctatccatcgtgggtattttatgcgggcatccattgggtctgg 14088159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 29456143 - 29456304
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||||| || || |||||||||||||| ||||||  ||||| |||| | || ||| ||||||    
T  29456143 cggggctgggcagtatagtatccttatccgtgcccatatccattaaaattcgtgggtattacccggacccgtccccagatccatgatagcgggattttac 29456242  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||| ||||||||| |||||| |||||||| |||||||  |||| |||||||||||||||||    
T  29456243 cctacccattgtggatattttatgcgggtatccattgggcctgggtccaattgccatcccta 29456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 19254190 - 19254027
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||| ||||| ||||||||||| || |||| ||||| |||||| |||||||| ||| |||||| |||| ||| |||||    
T  19254190 cggggctgggtagtatagtacccttatccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtacccatacccatgaaagcggggtttta 19254092  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| |||||||||||||||||||| ||| ||||| || ||||| |||||||| ||||||||||    
T  19254091 ccctacccattgtgggtattttttgctggtgcccatcgggtctgggtccaattgtcatccctacc 19254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 41692210 - 41692047
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  41692210 cggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 41692112  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  41692111 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 41692047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 6277544 - 6277394
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||||||||||||||| ||||||||||| || |||  ||||| || || |||||||  ||| |||||| |||| ||| |||||| ||| ||||||    
T  6277544 agtatagtacccttacccgtgtccatacccattaaaatttacgggtaataaccctacccgtgcccatacccatgaaagcggggttttaccctacccattg 6277445  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |||||||||||||||||| ||||| |||||||  || ||||||||||||||    
T  6277444 tgggtattttttgcgggtgcccatcggatctgagtcaaattgccatcccta 6277394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 34718526 - 34718363
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||| |||||||||||||| ||||||||||| || |||| ||||| |||||| |||||||  ||| | |||| |||| ||| |||||    
T  34718526 cggggctgggtagtataatacccttacccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 34718428  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  34718427 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 34718363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 22631996 - 22631874
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||  ||||||  |||||| ||| | || ||  |||||| |||     
T  22631996 ctgggcagtatagtacccttacctgtgcccatacccatttaaattcgtgggtattacccagacccgtccccagacacatgatagcggagttttaccctac 22631897  T
Q  125 ccattgtgggtattttttgcggg 147  Q
    ||||||||| |||||| ||||||    
T  22631896 ccattgtggatattttatgcggg 22631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 4572625 - 4572709
Alignment:
Q  24 tctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaag 108  Q
    |||| |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  4572625 tctgagcagtataatacttttacccgtgcccatatccatttaattttgtgggtattacccgtacccatgcccatacccataaaag 4572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 10937789 - 10937948
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||| |||||||| ||||||||||  ||||||||||| ||| |||| |   |||||||| ||||    ||| ||||||||||| ||| ||||||    
T  10937789 cggggctgggtagtatagtgcccttacccgcacccatacccatctaaatttgcgta-attacccggacccaagcccatacccataaaagcggggttttac 10937887  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccct 180  Q
     ||| | |||||||||||||||||||||||||||| ||  |||| | ||||||||||||||    
T  10937888 cctacctattgtgggtattttttgcgggtacccatcgggcctgggttcaattgccatccct 10937948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 6224600 - 6224501
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||| |||| |  |||||||||| | || ||| ||||||    
T  6224600 cggggctgggcagtatagtac--ttacccgtgcccatacccattaaaatttgtgggtattacccggacccttccccagacccatgatagcggggttttac 6224503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 15673631 - 15673469
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||||| ||| |||||||||||  |||| ||||| |||| ||||| ||||||| |||| |  ||| | |||| |||| ||| |||||    
T  15673631 cggggctgggtagtatagtgcccgtacccgtgcccgcacccttttaagtttgcgggtaattacccggacccatgcccatatccattaaagcggggtttta 15673532  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    | ||| |||||| |||||||||||| |||| ||||| ||  |||| || ||||||||||||||    
T  15673531 ccctacccattgcgggtattttttgtgggtgcccatcgggcctgggtctaattgccatcccta 15673469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 41983587 - 41983704
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||| |||| ||||| |||||||||||| ||| |||||||||||||| || |||| |||||||||| |||||  ||||||| || | || ||| ||||||    
T  41983587 cgggactggacagtaaagtacccttacctgtgtccatacccatttaaattcgtggatattacccgtccccgtccccagacctatgatagcggggttttac 41983686  T
Q  120 tctatccattgtgggtat 137  Q
     ||| ||||||| |||||    
T  41983687 cctacccattgtaggtat 41983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 4898441 - 4898353
Alignment:
Q  93 tccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    ||||||||||| |||| ||| |||||| ||| |||||| |||| ||||||| ||||| |||| || ||||| |||||||||||||||||    
T  4898441 tccagacccatgaaagcggggttttaccctacccattgcgggttttttttgtgggtatccatcgggtctgggtccaattgccatcccta 4898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 639042 - 638908
Alignment:
Q  49 gtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcggg 147  Q
    ||||||||| |||||||| |||| ||||| |||| | |||||  | || ||||||| |||| ||| |||||| ||| |||    || |||||||||||||    
T  639042 gtgcccatatccatttaaatttgcgggtaattacacatacccaaacccggacccatgaaagcggggttttaccctacccacatcggatattttttgcggg 638943  T
Q  148 tacccattggatctggatccaattgccatccctac 182  Q
    | ||||| |||||||||||| ||||||||||||||    
T  638942 tgcccataggatctggatcctattgccatccctac 638908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 35853920 - 35854083
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||| ||| ||| ||||||| ||||||||||| ||| |||| ||||| |||||| |||||    || || |||| |||  ||| |||||    
T  35853920 cggggctgggtagtacagtgcccatacccgttcccatacccatataaatttgcgggtaattacccatacccaagcccggatccatgaaaacggggtttta 35854019  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctac 182  Q
    | ||| ||||   ||||||||||| ||||| ||||| |||||||| || |||||||||||||||    
T  35854020 ccctacccataacgggtattttttacgggtgcccataggatctgggtctaattgccatccctac 35854083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 5657368 - 5657204
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| |||||||| ||||||||||  | ||||||||| ||| |||| ||||| |||| || | ||    ||| ||||||||||||||| |||||    
T  5657368 cggggctgggtagtatagtgcccttacccgcactcatacccatctaaatttgcgggtaattacacggatccaagcccatacccataaaagtgggatttta 5657269  T
Q  119 ctctatccattgtgggta--ttttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |  || ||||||  ||||  |||||||||||| || || |||||||| ||||||||| |||||||    
T  5657268 ccatacccattgcaggtaatttttttgcgggtgcctatcggatctgggtccaattgcaatcccta 5657204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 25694420 - 25694261
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||| ||| | || ||||||  | |||| ||||| |||||| |||| ||  ||| |||||| |||| ||| |||||    
T  25694420 cggggctgggtagtatagtacccttacctgtgtctatgcccattacaatttgcgggtaattaccc-tacctgtgcccatacccatgaaagcggggtttta 25694322  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccc 179  Q
      ||| ||||||||||||||||||||  || |||||  | ||| | |||||||||||||||    
T  25694321 tcctacccattgtgggtattttttgcaagtgcccatcaggtctaggtccaattgccatccc 25694261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 36470251 - 36470144
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctat 124  Q
    ||||| ||||||||||  |||||||||||||||   ||   | ||||||||||||||||| |||||| |||| |||||  |||| ||  |||||| ||||    
T  36470251 ctgggtagtatagtacttttacccgtgcccatattgataacaatttgtgggtattacccggacccgtgtccatacccaagaaagcggagttttaccctat 36470152  T
Q  125 ccattgtg 132  Q
    ||||||||    
T  36470151 ccattgtg 36470144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 33346708 - 33346550
Alignment:
Q  25 ctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    ||||| |||||||| ||| |||||||||||  | || ||||| |||| ||||| ||||||| |||| |  ||| | |||| |||| ||| |||||| |||    
T  33346708 ctgggtagtatagtgcccgtacccgtgcccgcatccttttaagtttgcgggtaattacccgaacccatgcccatatccatgaaagcgggattttacgcta 33346609  T
Q  124 tccattgtgggtatt-ttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    || |||| ||||||| ||||| ||||  |||| | | ||||||| ||||||||||||||    
T  33346608 tctattgcgggtatttttttgtgggtgtccatcgaacctggatctaattgccatcccta 33346550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 31214 - 31278
Alignment:
Q  114 ttttactctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcc 178  Q
    |||||| ||| |||||  ||||||||||| ||| ||||||| ||| |||| ||||||||||||||    
T  31214 ttttaccctacccattacgggtattttttacggatacccatcggacctggttccaattgccatcc 31278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 16187198 - 16187330
Alignment:
Q  50 tgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgggt 148  Q
    ||||||||||||||||| |||| ||||| |||||| |||||  | || || |||| |||| ||  |||||| ||| |||| |  | |||||||||| |||    
T  16187198 tgcccatacccatttaaatttgcgggtaattacccatacccaaaccctgatccatgaaagcggagttttaccctacccatagcagatattttttgcaggt 16187297  T
Q  149 acccattggatctggatccaattgccatcccta 181  Q
      |||| |||||||| ||| |||||||||||||    
T  16187298 gtccataggatctgggtcctattgccatcccta 16187330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 240225 - 240064
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttac 119  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||| ||||||    
T  240225 cgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtacccgtgtccagatccacaaaagcgggattttac 240126  T
Q  120 tctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
     ||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  240125 cctatccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 5626 - 5469
Alignment:
Q  24 tctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactcta 123  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||    
T  5626 tctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccggacccgtacccagacccataaaagtgggattttacccta 5527  T
Q  124 tccattgtgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
      |||||||| |||||||| |||||||||||| ||||||| |||| ||| ||||||||    
T  5526 ctcattgtggatattttttacgggtacccattagatctgggtccagttgtcatcccta 5469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 27000 - 27163
Alignment:
Q  20 cgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggctttta 118  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||| || |||| |||| ||||||| |||||||  ||| | |||| |||| ||| |||||    
T  27000 cggggctgggtagtatagtacccttacccgtatccatacccattaaaatttgcgggtaattaccc-tacccgtgcccatatccatgaaagcggggtttta 27098  T
Q  119 ctctatccattgtgggtattttttgcgggtacccattggatctggatccaattgccatccctacc 183  Q
    | ||| ||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||    
T  27099 ccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatccctacc 27163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 2400 - 2550
Alignment:
Q  31 agtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccgtatccagacccataaaagtgggcttttactctatccattg 130  Q
    ||||||||  |||||||||  ||||||||||| ||| |||| ||  |||||||| || |    ||| ||||||||||||||| |||||| ||| ||||||    
T  2400 agtatagtggccttacccgcacccatacccatctaaatttgcggtaattacccggactcaagcccatacccataaaagtggggttttaccctacccattg 2499  T
Q  131 tgggtattttttgcgggtacccattggatctggatccaattgccatcccta 181  Q
    |  |||||||||  |||||||||| ||| || |||||||||||||||||||    
T  2500 taagtattttttatgggtacccatcggacctagatccaattgccatcccta 2550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 12765 - 12630
Alignment:
Q  49 gtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgg- 146  Q
    |||||||||||||||||| ||||||||| ||||||| |||||  | || ||||||| |||| ||| |||||| ||| |||| | |||||||||||| ||     
T  12765 gtgcccatacccatttaaatttgtgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtattttttgtggc 12666  T
Q  147 gtacccattggatctggatccaattgccatccctac 182  Q
    || ||||| || ||| | ||| ||||||||||||||    
T  12665 gtgcccatagggtctaggtcctattgccatccctac 12630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 21600 - 21465
Alignment:
Q  49 gtgcccatacccatttaattttgtgggt-attacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcgg- 146  Q
    |||||||||||||||||| ||||||||| ||||||| |||||  | || ||||||| |||| ||| |||||| ||| |||| | |||||||||||| ||     
T  21600 gtgcccatacccatttaaatttgtgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtattttttgtggc 21501  T
Q  147 gtacccattggatctggatccaattgccatccctac 182  Q
    || ||||| || ||| | ||| ||||||||||||||    
T  21500 gtgcccatagggtctaggtcctattgccatccctac 21465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 905 - 1045
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    |||||||||||||| |||||||| |||| ||||| ||| || |||||   ||| ||||||  |||| ||| |||||| ||| |||| | |||||||||||    
T  905 tacccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcctgacccaggaaagcggggttttaccctacccatagcgggtatttttt 1004  T
Q  143 gcgggtacccattggatctggatccaattgccatccctacc 183  Q
    || ||| ||||| || ||||| ||| ||||||||| |||||    
T  1005 gcaggtgcccatggggtctgggtcctattgccatcgctacc 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 23547 - 23407
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    |||||||||||||| |||||||| |||| ||||| ||| || |||||   ||| ||||||  |||| ||| |||||| ||| |||| | |||||||||||    
T  23547 tacccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcctgacccaggaaagcggggttttaccctacccatagcgggtatttttt 23448  T
Q  143 gcgggtacccattggatctggatccaattgccatccctacc 183  Q
    || ||| ||||| || ||||| ||| ||||||||| |||||    
T  23447 gcaggtgcccatggggtctgggtcctattgccatcgctacc 23407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 33715 - 33575
Alignment:
Q  44 tacccgtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtatttttt 142  Q
    |||||||||||||| |||||||| |||| ||||| ||| || |||||   ||| ||||||  |||| ||| |||||| ||| |||| | |||||||||||    
T  33715 tacccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcctgacccaggaaagcggggttttaccctacccatagcgggtatttttt 33616  T
Q  143 gcgggtacccattggatctggatccaattgccatccctacc 183  Q
    || ||| ||||| || ||||| ||| ||||||||| |||||    
T  33615 gcaggtgcccatggggtctgggtcctattgccatcgctacc 33575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 109692 - 109559
Alignment:
Q  49 gtgcccatacccatttaattttgtgggta-ttacccgtacccgtatccagacccataaaagtgggcttttactctatccattgtgggtattttttgcggg 147  Q
    |||||||||||||| ||| |||| ||||| |||||| |||||    || ||||||| |||| ||| ||||||  || |||| | || |||||||| |||     
T  109692 gtgcccatacccatataaatttgcgggtaattacccatacccaagcccggacccatgaaagcggggttttaccatacccatagcggatattttttacgga 109593  T
Q  148 tacccattggatctggatccaattgccatcccta 181  Q
    | ||||| ||||| || |||||||||||||||||    
T  109592 tgcccataggatccgggtccaattgccatcccta 109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University