View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10938_low_8 (Length: 315)

Name: NF10938_low_8
Description: NF10938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10938_low_8
NF10938_low_8
[»] chr7 (8 HSPs)
chr7 (59-282)||(42513062-42513285)
chr7 (59-209)||(30456307-30456456)
chr7 (135-282)||(38572287-38572434)
chr7 (59-209)||(30452702-30452847)
chr7 (69-181)||(11206499-11206611)
chr7 (58-238)||(41712265-41712443)
chr7 (70-234)||(49017102-49017266)
chr7 (69-183)||(6102928-6103043)
[»] chr3 (8 HSPs)
chr3 (59-259)||(36326442-36326640)
chr3 (120-282)||(30911982-30912144)
chr3 (108-280)||(55211737-55211905)
chr3 (69-155)||(14029381-14029467)
chr3 (128-282)||(32414663-32414821)
chr3 (106-195)||(33328218-33328306)
chr3 (59-98)||(30912146-30912185)
chr3 (73-115)||(32414847-32414889)
[»] chr6 (7 HSPs)
chr6 (57-282)||(4834644-4834871)
chr6 (59-282)||(7415566-7415789)
chr6 (59-266)||(7422590-7422797)
chr6 (59-279)||(7426516-7426736)
chr6 (59-282)||(33242776-33242998)
chr6 (59-161)||(13886589-13886691)
chr6 (212-282)||(13886515-13886585)
[»] chr5 (5 HSPs)
chr5 (58-282)||(8123455-8123679)
chr5 (69-282)||(671389-671602)
chr5 (58-186)||(41709523-41709651)
chr5 (59-209)||(24108697-24108848)
chr5 (59-139)||(10321869-10321949)
[»] chr1 (6 HSPs)
chr1 (59-282)||(18583886-18584109)
chr1 (59-209)||(23405475-23405625)
chr1 (59-149)||(21075941-21076031)
chr1 (219-282)||(13087634-13087696)
chr1 (69-149)||(9893803-9893883)
chr1 (69-186)||(13087701-13087817)
[»] chr8 (2 HSPs)
chr8 (59-200)||(44761976-44762117)
chr8 (59-200)||(44765283-44765424)
[»] chr4 (6 HSPs)
chr4 (59-209)||(27387620-27387770)
chr4 (59-191)||(55322334-55322467)
chr4 (169-282)||(20441029-20441141)
chr4 (59-200)||(36050673-36050813)
chr4 (59-200)||(36053932-36054072)
chr4 (69-183)||(24733642-24733756)
[»] chr2 (5 HSPs)
chr2 (167-282)||(31211616-31211731)
chr2 (59-163)||(31211859-31211963)
chr2 (75-209)||(45327420-45327554)
chr2 (69-142)||(31193244-31193317)
chr2 (59-96)||(40400909-40400946)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 5e-90; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 282
Target Start/End: Original strand, 42513062 - 42513285
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  42513062 tgatacgacccaattcgagtagggatcacactccagaaattagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 42513161  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||| | ||||||||||    
T  42513162 aataaagcatacaatgcttatatagacttgtgcatactcataataagataagtgtaccctaacatactcaatattatcccctaacaatagaccttctaga 42513261  T
Q  259 tccttctagactaaggtgagtcat 282  Q
    |||||||||| |||||||||||||    
T  42513262 tccttctagattaaggtgagtcat 42513285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 30456456 - 30456307
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||    
T  30456456 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattcgttctaat 30456357  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataa 209  Q
     ||||  |||| ||||||||||||||||| |||||||||||||||| ||||    
T  30456356 cataaggcatataatgcttatatagactt-tgcatactcataataagataa 30456307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 282
Target Start/End: Original strand, 38572287 - 38572434
Alignment:
Q  135 attatattattcattcattctcataataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatca 234  Q
    |||||||| || ||| |||||||||||||  ||||||||| ||||||||||||| ||||| ||||||||| ||||||| |||| ||| |||||||||| |    
T  38572287 attatattttttattaattctcataataaggcatacaatgtttatatagacttgggcatattcataataagataagtgtaccctaacttactcaatatta 38572386  T
Q  235 tcccctaacaagataccttctagatccttctagactaaggtgagtcat 282  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  38572387 tcccctaacaagataccttctagatccttttagattaaggtgagtcat 38572434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 30452847 - 30452702
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||    
T  30452847 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattcgttctaat 30452748  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataa 209  Q
     ||||  |||||||    ||||||||||| |||||||||||||||| ||||    
T  30452747 cataaggcatacaa----tatatagactt-tgcatactcataataagataa 30452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 11206611 - 11206499
Alignment:
Q  69 caattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcataataaaacat 168  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||    
T  11206611 caattcgagtagagatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcataataaggcat 11206512  T
Q  169 acaatgcttatat 181  Q
    |||||| ||||||    
T  11206511 acaatgtttatat 11206499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 41712443 - 41712265
Alignment:
Q  58 ttgatacgattcaattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctc 156  Q
    |||||||||  ||||||||||| ||||||||||||| || || |||| || |||||||||| || |||||| |||||  |||| ||  ||||||||||||    
T  41712443 ttgatacgacccaattcgagtaaggatcacactccaaaaattaagagaga-aaactagagacaaaagaaaggaaatttgttatttt--tcattcattctc 41712347  T
Q  157 ataataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatccc 238  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||| |||||    
T  41712346 ataataagacatacaatacttatatagacttgtgcctactcataataaaataagtgcaccctaacatacttaatattatccc 41712265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 49017266 - 49017102
Alignment:
Q  70 aattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcataataaaacata 169  Q
    ||||||| |||||||||||||||| || | |||| ||||||||||||| || |||||||||||  |||||||| |||||| | |||||||||||  ||||    
T  49017266 aattcgaatagggatcacactccataaattagagagagaaactagagataaaagaaagaaaatatattatatttttcattaagtctcataataaggcata 49017167  T
Q  170 caatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatca 234  Q
    ||||||||||| | ||||||| ||| ||||||||| ||||||||| |  ||||||||||||||||    
T  49017166 caatgcttatacaaacttgtggatagtcataataagataagtgcatcataacatactcaatatca 49017102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 6103043 - 6102928
Alignment:
Q  69 caattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagag-aaagaaaattcattatattattcattcattctcataataaaac 166  Q
    ||||||||||||| ||||||||||| || || |||| || |||||||||| || || ||| ||||||||||||||| |||||| ||||| || || |||     
T  6103043 caattcgagtaggaatcacactccataaattaagagaga-aaactagagataaaagcaaaaaaaattcattatatttttcattgattctaatcatgaaag 6102945  T
Q  167 atacaatgcttatatag 183  Q
    |||||||||||||||||    
T  6102944 atacaatgcttatatag 6102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 59 - 259
Target Start/End: Complemental strand, 36326640 - 36326442
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36326640 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 36326541  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36326540 aataaagcatacaatgcttatatagact--tgcatactcataataacctaagtgcaccctaacatactcaatatcatcccctaacaagataccttctaga 36326443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 120 - 282
Target Start/End: Complemental strand, 30912144 - 30911982
Alignment:
Q  120 agagaaagaaaattcattatattattcattcattctcataataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcacccca 219  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||| |||||||||||||||||||||||| ||||| |||||||||||| |    
T  30912144 agagaaagaaaattcattatatttttcattgattctcataataaggcatacaatacttatatagacttgtgcatactcacaataaaataagtgcacccta 30912045  T
Q  220 acatactcaatatcatcccctaacaagataccttctagatccttctagactaaggtgagtcat 282  Q
    ||||||||||||| ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  30912044 acatactcaatattatcccctaacaagatatattttagatccttctagattaaggtgagtcat 30911982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 55211737 - 55211905
Alignment:
Q  108 aaactagagaaaagagaaaga-aaattcattatattattcattcattctcataataaaacatacaatgcttatatagacttgtgcatactcataataaca 206  Q
    |||||||||| |||||| | | |||||||||||||| |||||| |||||||||||||  |||||||     ||||||||||||||||| ||||||||| |    
T  55211737 aaactagagataagagagaaataaattcattatatttttcattgattctcataataaggcatacaa-----atatagacttgtgcatattcataataaga 55211831  T
Q  207 taagtgcaccccaacatactcaatatcatcccctaacaagataccttctagatccttctagactaaggtgagtc 280  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||||||| | ||||||| |||| |||| ||||||    
T  55211832 taagtgcaccctaacatactcaatattatcccctaccaatataccttatggatccttttagattaagatgagtc 55211905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 14029467 - 14029381
Alignment:
Q  69 caattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattct 155  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||| |||||||||||||| |||||| |||||    
T  14029467 caattcgagtagggatcacactccagaatttagagtgagaaactagagataaaagaaaggaaattcattatatttttcattgattct 14029381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 282
Target Start/End: Complemental strand, 32414821 - 32414663
Alignment:
Q  128 aaaattcattatattattcattcattctcataataaaacatacaatgcttatatagacttgt----gcatactcataataacataagtgcaccccaacat 223  Q
    |||| |||||||||| || ||| |||||| ||||||  ||||||||| ||||||||||||||    ||| ||||| ||||| |||||||||||  |||||    
T  32414821 aaaaatcattatattttttattgattctcgtaataaggcatacaatgtttatatagacttgtttgtgcaaactcaaaataagataagtgcaccataacat 32414722  T
Q  224 actcaatatcatcccctaacaagataccttctagatccttctagactaaggtgagtcat 282  Q
    ||| ||||| ||||||  |||| ||||||||||||||||| |||  |||||||||||||    
T  32414721 acttaatattatccccagacaatataccttctagatccttataggttaaggtgagtcat 32414663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 33328306 - 33328218
Alignment:
Q  106 agaaactagagaaaagagaaagaaaattcattatattattcattcattctcataataaaacatacaatgcttatatagacttgtgcatac 195  Q
    |||||||| |||||| |||||| ||||| |||||||  ||||||  |||| || ||||| ||||||||||||||| |||||| |||||||    
T  33328306 agaaacta-agaaaaaagaaaggaaattgattatatctttcattggttctaattataaagcatacaatgcttatacagacttatgcatac 33328218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 30912185 - 30912146
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaatt 98  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  30912185 tgatacgactcaattcgagtacggatcacactccagaatt 30912146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 32414889 - 32414847
Alignment:
Q  73 tcgagtagggatcacactccagaattcagagggagaaactaga 115  Q
    ||||||||||||||||||||| |||| |||| |||||||||||    
T  32414889 tcgagtagggatcacactccaaaatttagagagagaaactaga 32414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 57 - 282
Target Start/End: Complemental strand, 4834871 - 4834644
Alignment:
Q  57 gttgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctc 156  Q
    ||||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||     
T  4834871 gttgatacgacccaatttgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattcta 4834772  T
Q  157 ataataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagata--ccttc 254  Q
    ||||| |  |||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||| ||||||  ||||     
T  4834771 ataatgaggcatacaatgcttatatagacttatgcatactcataataagataagtgcaccctaacatactcaatattatcccctaataagatactccttt 4834672  T
Q  255 tagatccttctagactaaggtgagtcat 282  Q
    |||||||||||||| |||||||||||||    
T  4834671 tagatccttctagattaaggtgagtcat 4834644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 59 - 282
Target Start/End: Complemental strand, 7415789 - 7415566
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||| ||| | |||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  7415789 tgatacgatccaacttgagtagggatcacactccagaaattagagagagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 7415690  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||  |||||||||||||||||||||| ||  |||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||  |||||||    
T  7415689 aataaggcatacaatgcttatatagacttatgtgtactcataataagataagtgcaccataacatactcaatattatcccctaacaagataatttctaga 7415590  T
Q  259 tccttctagactaaggtgagtcat 282  Q
    |||||||| | |||| ||||||||    
T  7415589 tccttctaaattaagatgagtcat 7415566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 59 - 266
Target Start/End: Complemental strand, 7422797 - 7422590
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  ||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  7422797 tgatacgacccaattcgagtagggatcacactcaagaaattagagagagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 7422698  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||  |||||||||||||||||||||| ||  ||||| |||||| |||||||||||  |||||||||||| | |||||||||||||||| ||||||||    
T  7422697 aataaggcatacaatgcttatatagacttatgtgtactcttaataagataagtgcaccataacatactcaatgttatcccctaacaagataacttctaga 7422598  T
Q  259 tccttcta 266  Q
    ||||||||    
T  7422597 tccttcta 7422590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 279
Target Start/End: Complemental strand, 7426736 - 7426516
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||| | |||  |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  7426736 tgatacgacccaattcgagtagggatcacactccagaaattagaaagagaaattagagaaaagagaaagaaaattcattatatttttcattgattctcat 7426637  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||  ||||||||| |||||||||||| ||  ||||| |||||| |||||||||||  |||||||||||||| |||||||||||||||| ||||||||    
T  7426636 aataaggcatacaatgtttatatagacttatgtgtactcttaataagataagtgcaccataacatactcaatattatcccctaacaagataacttctaga 7426537  T
Q  259 tccttctagactaaggtgagt 279  Q
    |||| ||||| |||| |||||    
T  7426536 tcctactagattaagatgagt 7426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 59 - 282
Target Start/End: Complemental strand, 33242998 - 33242776
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||| ||||||||||||||| | |||| ||||||||||| | || |||||  |||||||||||||| |||||| ||||||||    
T  33242998 tgatacgacccaattcgagtagagatcacactccagaaattagagagagaaactagaaataaaagaaaagaaattcattatatttttcattgattctcat 33242899  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctaga 258  Q
    |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||| ||  |||||| |    
T  33242898 aataaggcatacaatgcttatatagacttgtgcatactcataataagataagtgca-cctaacatactcaatattatcccctaacaatatgtcttctaaa 33242800  T
Q  259 tccttctagactaaggtgagtcat 282  Q
    ||||| ||||||||| ||| ||||    
T  33242799 tccttatagactaagatgactcat 33242776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 13886691 - 13886589
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||    
T  13886691 tgatacgacccaatttgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctaat 13886592  T
Q  159 aat 161  Q
    |||    
T  13886591 aat 13886589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 13886585 - 13886515
Alignment:
Q  212 gcaccccaacatactcaatatcatcccctaacaagataccttctagatccttctagactaaggtgagtcat 282  Q
    |||||| |||||||| ||||| | ||| |||||| ||||||| |||||| ||||||| |||||||||||||    
T  13886585 gcaccctaacatacttaatattaccccttaacaatataccttttagatctttctagattaaggtgagtcat 13886515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 58 - 282
Target Start/End: Complemental strand, 8123679 - 8123455
Alignment:
Q  58 ttgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    |||||||||  ||||||||||| |||||||||| ||||| | ||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||    
T  8123679 ttgatacgacccaattcgagtatggatcacacttcagaaattagagggagaaattaaagaaaagagaaagaaaattcattatatttttcattgattctca 8123580  T
Q  158 taataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctag 257  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||| | | |||||||    
T  8123579 taataaagcatacaatgcttatatagacttgtgcatactcataataagataagtgtaccctaacatactcaatattatcccctaacaatagatcttctag 8123480  T
Q  258 atccttctagactaaggtgagtcat 282  Q
    ||||||||||| |||||| ||||||    
T  8123479 atccttctagattaaggtcagtcat 8123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 282
Target Start/End: Complemental strand, 671602 - 671389
Alignment:
Q  69 caattcgagtagggatcacactccagaattcagagggagaaa-ctagagaaaagagaaagaaaattcattatattattcattcattctcataataaaaca 167  Q
    |||||||||| ||||||||||| ||||| | | || |||||| ||||||| || ||||||||||||||||||||| |||||| |||||||||||||  ||    
T  671602 caattcgagttgggatcacacttcagaaatta-agagagaaagctagagataaaagaaagaaaattcattatatttttcattaattctcataataaggca 671504  T
Q  168 tacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctagatccttctag 267  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||||||| |||||||||||| ||| ||| | |||||||||||    
T  671503 tacaatgattatataaacttgtgcatactcataataagataagtgtaccctaacctactcaatattatcccctaacaatatatcttatggatccttctag 671404  T
Q  268 actaaggtgagtcat 282  Q
    | |||||||||||||    
T  671403 attaaggtgagtcat 671389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 41709651 - 41709523
Alignment:
Q  58 ttgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    |||||||||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  41709651 ttgatacgacccaattcgagtagagatcacactccagaatttagagggagaaactatagaaaagagaaagaaaattcattatatttttcattgattctca 41709552  T
Q  158 taataaaacatacaatgcttatatagact 186  Q
    ||||||  ||||||||| |||||||||||    
T  41709551 taataaggcatacaatgtttatatagact 41709523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 24108848 - 24108697
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaa-ctagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    ||||||||  |||||||||||||||||||||||||||| | | ||| ||||| ||||||| ||   |||| |||||||||||||| ||||||  |||| |    
T  24108848 tgatacgacccaattcgagtagggatcacactccagaaatta-aggaagaaaactagagacaaacaaaaggaaattcattatatttttcattggttctaa 24108750  T
Q  158 taataaaacatacaatgcttatatagacttg-tgcatactcataataacataa 209  Q
    | |||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  24108749 tcataagacatacaatgcttatatagacttgttgcatactcataataaaataa 24108697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 10321869 - 10321949
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattat 139  Q
    ||||||||  ||||| ||||||||||||||||||| |||| |||| || || ||||||| ||||||||| |||||||||||    
T  10321869 tgatacgacccaatttgagtagggatcacactccataatttagagagataagctagagataagagaaaggaaattcattat 10321949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 59 - 282
Target Start/End: Original strand, 18583886 - 18584109
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    ||||||||  |||||||||||| ||| ||||||||||| || |||| || |||||||||| || |||||| ||||||| |||||| |||||| |||||||    
T  18583886 tgatacgacccaattcgagtagagattacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcagtatatttttcattgattctca 18583984  T
Q  158 taataaaacatacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctag 257  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||  |||| ||||||| |||||||||||||| ||||||||| || ||||||| |||    
T  18583985 taataaagcatacaatgcttatatagacttgtgcatacttataatacgataactgcaccctaacatactcaatattatcccctaataatataccttttag 18584084  T
Q  258 atccttctagactaaggtgagtcat 282  Q
    ||||||||||| |||||||||||||    
T  18584085 atccttctagattaaggtgagtcat 18584109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 23405475 - 23405625
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23405475 tgatacgacccaattcaagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 23405574  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataa 209  Q
    |||||  ||||||||| ||| |||||||||||||||| |||| ||| ||||    
T  23405575 aataaggcatacaatgtttagatagacttgtgcatacacatagtaagataa 23405625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 21075941 - 21076031
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcatt 149  Q
    |||||||||  ||||||||||||||| ||||||||||||| || | ||||||||| ||| || |||||| ||||||| |||||| ||||||    
T  21075941 tgatacgatcaaattcgagtagggatgacactccagaatttagcgagagaaactacagataaaagaaaggaaattcactatatttttcatt 21076031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 13087696 - 13087634
Alignment:
Q  219 aacatactcaatatcatcccctaacaagataccttctagatccttctagactaaggtgagtcat 282  Q
    ||||||||| |||| |||||||||||| ||||||||||||| | |||||| |||||||||||||    
T  13087696 aacatactcgatattatcccctaacaatataccttctagat-cgtctagattaaggtgagtcat 13087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 9893883 - 9893803
Alignment:
Q  69 caattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcatt 149  Q
    ||||| ||||||| |||||||| || |||| || |  ||||||||||||  | ||||||||||||||||||||| ||||||    
T  9893883 caatttgagtaggtatcacactgcataatttagtgaaagaaactagagatgaaagaaagaaaattcattatatttttcatt 9893803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 13087817 - 13087701
Alignment:
Q  69 caattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattatt-cattcattctcataataaaaca 167  Q
    |||||||| |||| ||||||||||||||||  ||| |||    || ||| || |||||  ||||||||| |||| || ||||||||||||||||||  ||    
T  13087817 caattcgaataggtatcacactccagaatttcgagagaggt--taaagataaaagaaaataaattcattgtattttttcattcattctcataataaggca 13087720  T
Q  168 tacaatgcttatatagact 186  Q
    |||||| ||||||||||||    
T  13087719 tacaatacttatatagact 13087701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 44762117 - 44761976
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| |||||| ||| ||||    
T  44762117 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactatagaaaagagaaaaaaaattcattatatttttcattgattttcat 44762018  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcata 200  Q
    |||||  ||||||||| |||||||||||||||||||| ||||    
T  44762017 aataaggcatacaatgtttatatagacttgtgcatacacata 44761976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 44765424 - 44765283
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||| ||||    
T  44765424 tgatacgacccaattcgagtagggattacactccagaatttagagggagaaactatagaaaagagaaagaaaattcattatatttttcattgattttcat 44765325  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcata 200  Q
    |||||   |||||||| |||||||||||||||||||| ||||    
T  44765324 aataaggaatacaatgtttatatagacttgtgcatacacata 44765283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 27387770 - 27387620
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcat 158  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||  |  ||||  |||||||||||||| ||||||| | || ||    
T  27387770 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagatgaaggaaaagaaattcattatatttttcattcctgctaat 27387671  T
Q  159 aataaaacatacaatgcttatatagacttgtgcatactcataataacataa 209  Q
    ||| |  |||||||||||||||||||||||||||| ||| |||||| ||||    
T  27387670 aatgaggcatacaatgcttatatagacttgtgcatcctcgtaataagataa 27387620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 55322334 - 55322467
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaattcagagggagaaactagagaaaagagaaagaaaattcatta-tattattcattcattctca 157  Q
    ||||||||  |||||||||||||||||||||||||||||| ||| | |||| ||||||| || |||||| |||||||||| |||| ||||||||| || |    
T  55322334 tgatacgacccaattcgagtagggatcacactccagaatttagaagtagaagctagagataaaagaaaggaaattcattattatttttcattcatcctaa 55322433  T
Q  158 taataaaacatacaatgcttatatagacttgtgc 191  Q
    |||| |  ||||||||||||||||||||||||||    
T  55322434 taatgaggcatacaatgcttatatagacttgtgc 55322467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 20441029 - 20441141
Alignment:
Q  169 acaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctagatccttctaga 268  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||| |||||| |||| || ||||| |||||| |    
T  20441029 acaatgcttgtacagacttgtgcatactcataataagataagtgcaccctgacatgctcaatattatcccttaacaatatactttttagat-cttctaaa 20441127  T
Q  269 ctaaggtgagtcat 282  Q
     |||||||||||||    
T  20441128 ttaaggtgagtcat 20441141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 36050813 - 36050673
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    ||||||||  ||||||||||||||||||||||||| || || | || || |||||||||| || |||||  |||||||||||||| ||||||    ||||    
T  36050813 tgatacgacccaattcgagtagggatcacactccaaaaattaaaagaga-aaactagagataaaagaaaagaaattcattatatttttcatttcc-ctca 36050716  T
Q  158 taataaaacatacaatgcttatatagacttgtgcatactcata 200  Q
    ||||||  ||||||||| |||||||||||||||||||| ||||    
T  36050715 taataaggcatacaatgtttatatagacttgtgcatacacata 36050673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 36054072 - 36053932
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    ||||||||  ||||||||||||||||||||||||| || || | || || |||||||||| || |||||  |||||||||||||| ||||||    ||||    
T  36054072 tgatacgacccaattcgagtagggatcacactccaaaaattaaaagaga-aaactagagataaaagaaaagaaattcattatatttttcatttcc-ctca 36053975  T
Q  158 taataaaacatacaatgcttatatagacttgtgcatactcata 200  Q
    ||||||  ||||||||| |||||||||||||||||||| ||||    
T  36053974 taataaggcatacaatgtttatatagacttgtgcatacacata 36053932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 24733756 - 24733642
Alignment:
Q  69 caattcgagtagggatcacactccaga-attcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcataataaaaca 167  Q
    |||||| |||||||||||||||  ||| ||| |||| || |||||||| | || |||||| |||||||||||||| ||||||| |||| || || |||||    
T  24733756 caattcaagtagggatcacactttagatattaagagaga-aaactagatataaaagaaaggaaattcattatatttttcattccttctaatcatgaaaca 24733658  T
Q  168 tacaatgcttatatag 183  Q
    ||||||||||||||||    
T  24733657 tacaatgcttatatag 24733642  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 31211731 - 31211616
Alignment:
Q  167 atacaatgcttatatagacttgtgcatactcataataacataagtgcaccccaacatactcaatatcatcccctaacaagataccttctagatccttcta 266  Q
    ||||||| ||||||||||||| |||||||||||| ||| |||||||||| | |||||||||||||| |||||||||||| ||| |||||| |||||||||    
T  31211731 atacaatacttatatagacttatgcatactcatattaagataagtgcactctaacatactcaatattatcccctaacaatatatcttctaaatccttcta 31211632  T
Q  267 gactaaggtgagtcat 282  Q
    || ||| |||||||||    
T  31211631 gattaaagtgagtcat 31211616  T

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Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 31211963 - 31211859
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctca 157  Q
    ||||||||| |||||||||||||||||||||||||||| || |||| || |||||||||| || ||||||||||||||||||||| |||||| |||||||    
T  31211963 tgatacgatccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaagaaaattcattatatttttcattgattctca 31211865  T
Q  158 taataa 163  Q
    ||||||    
T  31211864 taataa 31211859  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 45327420 - 45327554
Alignment:
Q  75 gagtagggatcacactccagaa-ttcagagggagaaactagagaaaagagaaagaaaattcattatattattcattcattctcataataaaacatacaat 173  Q
    |||||||||||||||||||||| || |||| || ||| |||||| || |||||  ||||| |||||||| ||||||  |||||||||||| |||||||||    
T  45327420 gagtagggatcacactccagaaattaagagaga-aaattagagataaaagaaaagaaatttattatatttttcattttttctcataataagacatacaat 45327518  T
Q  174 gcttatatagacttgtgcatactcataataacataa 209  Q
    |||||||||||||||||||||| |||| ||| ||||    
T  45327519 gcttatatagacttgtgcatacacatagtaagataa 45327554  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 31193317 - 31193244
Alignment:
Q  69 caattcgagtagggatcacactccag-aattcagagggagaaactagagaaaagagaaagaaaattcattatatt 142  Q
    ||||||||||||||||||||||| || |||| |||| || ||||||||||  | |||||||||||| ||||||||    
T  31193317 caattcgagtagggatcacactctagaaattaagagaga-aaactagagatgaaagaaagaaaatttattatatt 31193244  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 40400909 - 40400946
Alignment:
Q  59 tgatacgattcaattcgagtagggatcacactccagaa 96  Q
    ||||| || |||||||||||||||||||||||||||||    
T  40400909 tgatatgactcaattcgagtagggatcacactccagaa 40400946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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