View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10939_low_7 (Length: 382)

Name: NF10939_low_7
Description: NF10939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10939_low_7
NF10939_low_7
[»] scaffold0005 (1 HSPs)
scaffold0005 (133-363)||(226352-226583)
[»] chr4 (58 HSPs)
chr4 (133-363)||(14590795-14591026)
chr4 (132-258)||(6430679-6430803)
chr4 (130-211)||(16911517-16911598)
chr4 (132-258)||(48598878-48599001)
chr4 (132-258)||(5648216-5648340)
chr4 (132-211)||(5306762-5306841)
chr4 (132-194)||(23501750-23501812)
chr4 (132-258)||(20224941-20225064)
chr4 (132-258)||(47528583-47528706)
chr4 (136-211)||(16408702-16408777)
chr4 (132-194)||(11054262-11054324)
chr4 (130-211)||(14983789-14983870)
chr4 (135-211)||(21646924-21647000)
chr4 (132-191)||(17315417-17315476)
chr4 (132-211)||(30639337-30639416)
chr4 (132-180)||(10660361-10660409)
chr4 (132-180)||(10874506-10874554)
chr4 (132-191)||(5313113-5313172)
chr4 (132-211)||(54730206-54730285)
chr4 (138-211)||(487234-487306)
chr4 (132-185)||(20405050-20405103)
chr4 (134-211)||(30352690-30352767)
chr4 (132-211)||(37494808-37494887)
chr4 (140-211)||(42164247-42164317)
chr4 (132-182)||(13256525-13256575)
chr4 (130-172)||(18969696-18969738)
chr4 (140-258)||(8473675-8473790)
chr4 (138-211)||(54640438-54640510)
chr4 (132-185)||(55766591-55766644)
chr4 (139-211)||(30496419-30496491)
chr4 (132-211)||(55830819-55830899)
chr4 (148-211)||(40915802-40915865)
chr4 (136-183)||(54966983-54967029)
chr4 (148-194)||(44363248-44363294)
chr4 (138-196)||(49938552-49938610)
chr4 (151-211)||(35567146-35567206)
chr4 (158-258)||(41018847-41018945)
chr4 (156-211)||(39077893-39077948)
chr4 (151-194)||(43035224-43035267)
chr4 (155-194)||(54175043-54175082)
chr4 (155-258)||(17043447-17043549)
chr4 (153-211)||(23580307-23580365)
chr4 (140-194)||(47441646-47441699)
chr4 (141-211)||(49938689-49938759)
chr4 (138-211)||(12257692-12257764)
chr4 (222-258)||(9987887-9987923)
chr4 (150-194)||(19027823-19027867)
chr4 (138-194)||(50856352-50856407)
chr4 (152-195)||(3580951-3580994)
chr4 (132-183)||(20373921-20373972)
chr4 (132-183)||(29879624-29879675)
chr4 (160-211)||(32629367-32629418)
chr4 (158-192)||(7385594-7385628)
chr4 (139-193)||(25343152-25343205)
chr4 (161-211)||(25463108-25463158)
chr4 (153-211)||(30690282-30690340)
chr4 (151-211)||(39029160-39029220)
chr4 (138-182)||(51420537-51420580)
[»] chr6 (28 HSPs)
chr6 (18-194)||(3815193-3815369)
chr6 (132-258)||(1346921-1347044)
chr6 (132-258)||(1354810-1354933)
chr6 (139-211)||(12222016-12222088)
chr6 (132-211)||(8409200-8409279)
chr6 (135-211)||(14975179-14975255)
chr6 (130-211)||(12063422-12063503)
chr6 (132-211)||(29355956-29356036)
chr6 (132-211)||(9161080-9161159)
chr6 (133-182)||(24734591-24734640)
chr6 (133-193)||(20400625-20400685)
chr6 (130-210)||(32728256-32728336)
chr6 (132-212)||(33922926-33923006)
chr6 (144-211)||(6024202-6024269)
chr6 (132-194)||(1941812-1941874)
chr6 (136-194)||(13905095-13905152)
chr6 (132-210)||(15866137-15866215)
chr6 (134-211)||(2166511-2166587)
chr6 (134-211)||(2178144-2178220)
chr6 (139-188)||(19649289-19649338)
chr6 (145-184)||(8417442-8417481)
chr6 (140-194)||(14553477-14553530)
chr6 (138-211)||(12889390-12889462)
chr6 (132-183)||(22967128-22967179)
chr6 (132-183)||(23821214-23821265)
chr6 (133-184)||(23930252-23930303)
chr6 (151-181)||(2755553-2755583)
chr6 (139-184)||(24097545-24097590)
[»] chr2 (45 HSPs)
chr2 (132-258)||(12023972-12024096)
chr2 (132-258)||(17896216-17896342)
chr2 (132-211)||(14530275-14530354)
chr2 (132-211)||(25079817-25079896)
chr2 (132-258)||(8455369-8455494)
chr2 (132-258)||(23397723-23397846)
chr2 (132-260)||(25249789-25249915)
chr2 (132-211)||(10543655-10543734)
chr2 (132-211)||(11514393-11514472)
chr2 (132-211)||(21779358-21779437)
chr2 (132-211)||(7214491-7214570)
chr2 (132-211)||(24200724-24200803)
chr2 (132-208)||(22371014-22371090)
chr2 (135-211)||(27573581-27573657)
chr2 (132-207)||(5840985-5841060)
chr2 (132-211)||(17705452-17705531)
chr2 (132-258)||(9671137-9671261)
chr2 (132-210)||(19977814-19977892)
chr2 (138-211)||(99362-99434)
chr2 (132-180)||(14544020-14544068)
chr2 (132-175)||(39189556-39189599)
chr2 (138-211)||(4516450-4516522)
chr2 (146-194)||(17667973-17668021)
chr2 (134-178)||(27466262-27466306)
chr2 (132-182)||(26684750-26684800)
chr2 (138-211)||(17380335-17380407)
chr2 (146-211)||(17623535-17623600)
chr2 (150-211)||(40416970-40417031)
chr2 (151-211)||(21377172-21377232)
chr2 (141-185)||(39914431-39914475)
chr2 (132-207)||(17472928-17473003)
chr2 (153-212)||(31158539-31158598)
chr2 (153-191)||(5450263-5450301)
chr2 (139-185)||(24860111-24860157)
chr2 (138-194)||(35017781-35017837)
chr2 (147-211)||(44604826-44604890)
chr2 (138-210)||(44643486-44643557)
chr2 (151-194)||(33795261-33795304)
chr2 (160-194)||(25641487-25641521)
chr2 (152-210)||(45235918-45235976)
chr2 (151-196)||(23145812-23145857)
chr2 (151-196)||(23557602-23557647)
chr2 (152-193)||(34752779-34752820)
chr2 (134-171)||(39499353-39499390)
chr2 (151-211)||(29419988-29420048)
[»] chr8 (38 HSPs)
chr8 (132-258)||(12670303-12670426)
chr8 (132-211)||(30454194-30454273)
chr8 (132-258)||(13160659-13160783)
chr8 (135-211)||(20869595-20869671)
chr8 (132-211)||(39461095-39461174)
chr8 (132-258)||(36720753-36720878)
chr8 (132-211)||(2626476-2626555)
chr8 (132-211)||(17823533-17823612)
chr8 (132-211)||(28817725-28817804)
chr8 (133-211)||(20284172-20284250)
chr8 (133-211)||(21070801-21070879)
chr8 (132-194)||(24245408-24245470)
chr8 (138-211)||(28407379-28407452)
chr8 (132-258)||(29521738-29521863)
chr8 (132-258)||(44530106-44530231)
chr8 (132-192)||(35261636-35261696)
chr8 (132-211)||(7136628-7136707)
chr8 (132-211)||(18164858-18164937)
chr8 (132-210)||(11748256-11748334)
chr8 (132-258)||(45071222-45071346)
chr8 (139-211)||(6760786-6760858)
chr8 (133-183)||(25250480-25250530)
chr8 (132-249)||(26954089-26954206)
chr8 (152-258)||(24365112-24365218)
chr8 (138-211)||(30962872-30962944)
chr8 (138-207)||(42083802-42083870)
chr8 (138-211)||(44781605-44781677)
chr8 (134-194)||(8897880-8897940)
chr8 (132-172)||(23286431-23286471)
chr8 (132-171)||(40605044-40605083)
chr8 (132-183)||(31454145-31454196)
chr8 (132-166)||(42840866-42840900)
chr8 (157-194)||(31457155-31457192)
chr8 (154-211)||(35105902-35105959)
chr8 (139-167)||(5688801-5688829)
chr8 (151-191)||(11001069-11001109)
chr8 (151-191)||(22598133-22598173)
chr8 (271-314)||(33867039-33867083)
[»] chr5 (33 HSPs)
chr5 (132-211)||(38879538-38879617)
chr5 (130-250)||(43334157-43334277)
chr5 (132-258)||(41014276-41014400)
chr5 (132-258)||(24448847-24448972)
chr5 (132-258)||(35710270-35710393)
chr5 (132-211)||(37024653-37024732)
chr5 (131-211)||(4619205-4619285)
chr5 (131-211)||(22861765-22861845)
chr5 (132-211)||(1565388-1565467)
chr5 (135-258)||(8170037-8170157)
chr5 (132-260)||(2838735-2838862)
chr5 (138-211)||(39301087-39301159)
chr5 (131-211)||(27328708-27328788)
chr5 (132-211)||(23974738-23974816)
chr5 (134-211)||(31299591-31299668)
chr5 (132-211)||(22187242-22187321)
chr5 (132-186)||(19438706-19438760)
chr5 (138-196)||(39079880-39079937)
chr5 (130-194)||(30006280-30006344)
chr5 (131-185)||(12006455-12006509)
chr5 (132-194)||(22600411-22600473)
chr5 (151-211)||(28516533-28516593)
chr5 (162-258)||(32703411-32703504)
chr5 (138-208)||(10634248-10634317)
chr5 (223-260)||(9794429-9794466)
chr5 (159-194)||(1850624-1850659)
chr5 (131-194)||(17419870-17419933)
chr5 (132-167)||(41956889-41956924)
chr5 (132-183)||(43574555-43574605)
chr5 (138-183)||(209054-209098)
chr5 (153-182)||(28208235-28208264)
chr5 (150-191)||(31362454-31362495)
chr5 (155-211)||(34074661-34074717)
[»] chr3 (43 HSPs)
chr3 (132-211)||(8247788-8247867)
chr3 (132-211)||(10870050-10870129)
chr3 (132-211)||(13730703-13730782)
chr3 (132-211)||(46421136-46421215)
chr3 (132-211)||(52926309-52926388)
chr3 (132-258)||(16735420-16735544)
chr3 (132-211)||(1217069-1217148)
chr3 (132-211)||(7696984-7697063)
chr3 (132-211)||(29366821-29366900)
chr3 (132-258)||(22609746-22609869)
chr3 (132-258)||(40272865-40272990)
chr3 (132-212)||(9607182-9607262)
chr3 (132-211)||(13628891-13628971)
chr3 (132-211)||(39203495-39203574)
chr3 (132-194)||(4495780-4495842)
chr3 (132-211)||(5173819-5173899)
chr3 (133-258)||(22122970-22123092)
chr3 (142-258)||(26869696-26869810)
chr3 (132-211)||(6411920-6411999)
chr3 (132-211)||(12914134-12914213)
chr3 (135-183)||(25517300-25517348)
chr3 (130-194)||(26782343-26782407)
chr3 (138-258)||(45620881-45621000)
chr3 (138-208)||(26573113-26573182)
chr3 (138-211)||(34420743-34420815)
chr3 (132-175)||(21874999-21875042)
chr3 (132-211)||(12525389-12525465)
chr3 (151-208)||(53062036-53062093)
chr3 (129-169)||(23871415-23871455)
chr3 (155-211)||(30928246-30928302)
chr3 (156-211)||(7942993-7943048)
chr3 (161-211)||(516417-516467)
chr3 (138-211)||(35417902-35417974)
chr3 (132-168)||(9276253-9276289)
chr3 (138-194)||(25944455-25944510)
chr3 (222-251)||(31831265-31831294)
chr3 (223-256)||(52428532-52428565)
chr3 (138-211)||(53996665-53996737)
chr3 (151-211)||(19731000-19731060)
chr3 (151-191)||(31542411-31542451)
chr3 (136-183)||(33235513-33235561)
chr3 (263-314)||(45288059-45288111)
chr3 (222-258)||(45948891-45948927)
[»] chr1 (57 HSPs)
chr1 (132-211)||(34725195-34725274)
chr1 (132-258)||(32632610-32632734)
chr1 (132-211)||(38478379-38478458)
chr1 (132-211)||(46248052-46248131)
chr1 (132-211)||(14617018-14617097)
chr1 (132-211)||(18944623-18944702)
chr1 (132-207)||(22930170-22930245)
chr1 (132-211)||(47214491-47214570)
chr1 (132-194)||(34714603-34714665)
chr1 (132-194)||(40424722-40424784)
chr1 (132-209)||(20004193-20004270)
chr1 (131-196)||(25290142-25290207)
chr1 (132-258)||(45812590-45812713)
chr1 (135-211)||(30395827-30395903)
chr1 (139-211)||(33222971-33223043)
chr1 (134-201)||(18742070-18742137)
chr1 (130-258)||(23768373-23768500)
chr1 (132-211)||(27474261-27474340)
chr1 (132-211)||(46991784-46991863)
chr1 (132-194)||(8197023-8197085)
chr1 (133-210)||(19414420-19414497)
chr1 (132-193)||(19932869-19932930)
chr1 (132-211)||(10668200-10668284)
chr1 (139-211)||(18724644-18724715)
chr1 (132-211)||(27201627-27201706)
chr1 (134-211)||(45402077-45402153)
chr1 (139-194)||(20036208-20036262)
chr1 (132-183)||(41319933-41319984)
chr1 (138-208)||(2435889-2435958)
chr1 (139-196)||(4430140-4430197)
chr1 (135-211)||(9939443-9939520)
chr1 (138-210)||(52910204-52910275)
chr1 (148-211)||(6925096-6925159)
chr1 (132-211)||(24564324-24564403)
chr1 (138-208)||(6983911-6983980)
chr1 (135-185)||(12126960-12127010)
chr1 (138-211)||(17470445-17470517)
chr1 (138-211)||(22327086-22327158)
chr1 (138-211)||(50811926-50811998)
chr1 (138-194)||(2436009-2436064)
chr1 (139-211)||(11596501-11596572)
chr1 (138-194)||(35019217-35019272)
chr1 (151-211)||(35117867-35117927)
chr1 (133-183)||(18335415-18335465)
chr1 (132-174)||(21723644-21723686)
chr1 (133-182)||(21006125-21006174)
chr1 (138-211)||(50760325-50760397)
chr1 (138-194)||(10378841-10378896)
chr1 (132-183)||(18335973-18336024)
chr1 (152-211)||(25468362-25468421)
chr1 (136-183)||(28894658-28894704)
chr1 (138-185)||(44485234-44485280)
chr1 (132-170)||(10163739-10163777)
chr1 (138-183)||(15511278-15511322)
chr1 (138-211)||(19701557-19701629)
chr1 (138-211)||(23371111-23371183)
chr1 (133-193)||(4212208-4212268)
[»] scaffold0187 (4 HSPs)
scaffold0187 (130-211)||(10147-10228)
scaffold0187 (130-211)||(20475-20556)
scaffold0187 (132-194)||(8902-8964)
scaffold0187 (132-194)||(19230-19292)
[»] chr7 (55 HSPs)
chr7 (132-258)||(21172062-21172185)
chr7 (132-211)||(32758218-32758297)
chr7 (132-211)||(42495934-42496013)
chr7 (132-211)||(42798626-42798705)
chr7 (132-211)||(47077952-47078031)
chr7 (132-194)||(48735237-48735299)
chr7 (136-258)||(10693126-10693245)
chr7 (132-211)||(2541118-2541198)
chr7 (132-211)||(42805481-42805560)
chr7 (132-211)||(43557429-43557508)
chr7 (140-258)||(19426942-19427059)
chr7 (135-211)||(40463837-40463913)
chr7 (132-211)||(7193042-7193121)
chr7 (133-208)||(14732924-14732999)
chr7 (132-211)||(18326991-18327070)
chr7 (132-211)||(46354151-46354230)
chr7 (137-211)||(27629596-27629670)
chr7 (128-193)||(29140477-29140542)
chr7 (132-193)||(42476830-42476891)
chr7 (134-210)||(7794606-7794682)
chr7 (132-208)||(34626309-34626385)
chr7 (132-191)||(5180276-5180335)
chr7 (136-211)||(11617687-11617762)
chr7 (132-211)||(21447547-21447626)
chr7 (135-194)||(35334930-35334989)
chr7 (132-211)||(47716416-47716495)
chr7 (132-194)||(22699086-22699148)
chr7 (135-191)||(1424029-1424085)
chr7 (132-204)||(28078237-28078309)
chr7 (140-258)||(19265781-19265896)
chr7 (138-203)||(3469286-3469350)
chr7 (138-211)||(28362244-28362316)
chr7 (138-194)||(13805066-13805121)
chr7 (151-211)||(29907393-29907455)
chr7 (132-194)||(8149062-8149124)
chr7 (132-194)||(12473261-12473323)
chr7 (132-178)||(25198679-25198725)
chr7 (149-211)||(33872008-33872070)
chr7 (132-258)||(2662988-2663109)
chr7 (138-211)||(48123583-48123655)
chr7 (157-258)||(42391153-42391251)
chr7 (152-194)||(6736867-6736909)
chr7 (145-187)||(28685257-28685299)
chr7 (141-211)||(39123857-39123926)
chr7 (150-211)||(7644931-7644992)
chr7 (138-260)||(19266414-19266534)
chr7 (138-211)||(23419773-23419845)
chr7 (154-260)||(11741774-11741877)
chr7 (151-182)||(14099134-14099165)
chr7 (151-182)||(14409151-14409182)
chr7 (132-179)||(45019007-45019054)
chr7 (138-211)||(44123720-44123792)
chr7 (151-211)||(1524285-1524345)
chr7 (137-193)||(5814433-5814489)
chr7 (151-211)||(16341254-16341314)
[»] scaffold0168 (1 HSPs)
scaffold0168 (132-211)||(30536-30615)
[»] scaffold0258 (2 HSPs)
scaffold0258 (132-212)||(13121-13201)
scaffold0258 (132-172)||(17507-17547)
[»] scaffold0024 (1 HSPs)
scaffold0024 (132-196)||(83832-83896)
[»] scaffold0057 (3 HSPs)
scaffold0057 (132-194)||(24883-24945)
scaffold0057 (138-193)||(46794-46849)
scaffold0057 (138-194)||(46999-47054)
[»] scaffold0049 (1 HSPs)
scaffold0049 (134-211)||(58936-59013)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-211)||(11093-11167)
[»] scaffold0311 (1 HSPs)
scaffold0311 (138-192)||(10773-10827)
[»] scaffold1176 (1 HSPs)
scaffold1176 (137-194)||(1701-1758)
[»] scaffold0254 (1 HSPs)
scaffold0254 (134-211)||(4117-4193)
[»] scaffold0031 (1 HSPs)
scaffold0031 (133-211)||(43085-43165)
[»] scaffold0194 (1 HSPs)
scaffold0194 (132-194)||(24621-24683)
[»] scaffold0036 (1 HSPs)
scaffold0036 (135-258)||(35070-35194)
[»] scaffold0018 (1 HSPs)
scaffold0018 (137-170)||(73001-73034)
[»] scaffold0116 (1 HSPs)
scaffold0116 (149-183)||(8865-8899)


Alignment Details
Target: scaffold0005 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 133 - 363
Target Start/End: Complemental strand, 226583 - 226352
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggc 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||        ||||||||||    
T  226583 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggc 226484  T
Q  233 tgcatacaatacaccaaatagtgggatcttgggaccttttcccgaaccctgcgtatgcaaaagctttag-gcaccaggttgccttgacctttttatttta 331  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| || |||||||||||||    
T  226483 tgcatacaatacatcaaatggtgggaccttgggaccttttcccgaaccctacgtatgcaaaaactttagtgcaccaggttgccctggcctttttatttta 226384  T
Q  332 ttttctaaggttatggtaaatttatacagtgg 363  Q
    ||||||||||||||||||||||||||||||||    
T  226383 ttttctaaggttatggtaaatttatacagtgg 226352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 133 - 363
Target Start/End: Original strand, 14590795 - 14591026
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggc 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||        ||||||||||    
T  14590795 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggc 14590894  T
Q  233 tgcatacaatacaccaaatagtgggatcttgggaccttttcccgaaccctgcgtatgcaaaagctttag-gcaccaggttgccttgacctttttatttta 331  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| || |||||||||||||    
T  14590895 tgcatacaatacatcaaatggtgggaccttgggaccttttcccgaaccctacgtatgcaaaaactttagtgcaccaggttgccctggcctttttatttta 14590994  T
Q  332 ttttctaaggttatggtaaatttatacagtgg 363  Q
    ||||||||||||||||||||||||||||||||    
T  14590995 ttttctaaggttatggtaaatttatacagtgg 14591026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 6430803 - 6430679
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  6430803 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttg--tgtaaaaacagggtaagg 6430706  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  6430705 ctgcgtacaatacaccaaatggtggga 6430679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 16911517 - 16911598
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||    
T  16911517 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttg 16911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 48599001 - 48598878
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  48599001 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaagg 48598905  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  48598904 ctgcgtacaatacaccaaatggtggga 48598878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 5648216 - 5648340
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  5648216 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttg--tgtaaaaacagggtaagg 5648313  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  5648314 ctgcgtacaatacaccaaatggtggga 5648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 5306841 - 5306762
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  5306841 gggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 5306762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 23501750 - 23501812
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23501750 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 20224941 - 20225064
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | | |||| |||||||  |        |||||||||    
T  20224941 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaac---agggtaagg 20225037  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  20225038 ctgcgtacaatacaccaaatggtggga 20225064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 47528706 - 47528583
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||  |        |||||||||    
T  47528706 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaagg 47528610  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  47528609 ctgcgtacaatacaccaaatggtggga 47528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 16408777 - 16408702
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 16408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 11054324 - 11054262
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11054324 gggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 11054262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 14983789 - 14983870
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||  ||||||||||||||||||||| ||| || ||||||||||||||||||||| | ||||||||||||    
T  14983789 gagggtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttg 14983870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 21646924 - 21647000
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| | | ||||||||||||    
T  21646924 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttg 21647000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 17315476 - 17315417
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaa 17315417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 30639337 - 30639416
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| | | ||||| ||||||    
T  30639337 gggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttg 30639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 10660361 - 10660409
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660361 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggt 10660409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 10874506 - 10874554
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10874506 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggt 10874554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 5313172 - 5313113
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaa 5313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 54730206 - 54730285
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| |||||||||  ||||||||||||||||||||||  ||||||||||| |||||||| ||| ||||||||||||    
T  54730206 gggtaactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttg 54730285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 487306 - 487234
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||    
T  487306 ccttggcgtaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttg 487234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 20405050 - 20405103
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  20405050 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacgg 20405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 30352767 - 30352690
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||  |||| | | ||||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttg 30352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 37494808 - 37494887
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||| | |||||||| | | |||| |||||||    
T  37494808 gggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttg 37494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 42164317 - 42164247
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| | |||| |||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttg 42164247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 13256575 - 13256525
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13256575 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtca 13256525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 18969696 - 18969738
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18969696 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 8473790 - 8473675
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatac 239  Q
    |||||||||||||||||||||||||||| |||| | |||||  ||| |||||||| | | ||||||||||||  |        |||||||||||||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgtttaac---agggtaaggctgcatac 8473694  T
Q  240 aatacaccaaatagtggga 258  Q
    |||||||||||| ||||||    
T  8473693 aatacaccaaatggtggga 8473675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 54640510 - 54640438
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||| ||||||||| ||| |||||||||||||| |||||||||| | ||||||||||||    
T  54640510 ccttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttg 54640438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 55766644 - 55766591
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  55766644 gggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacgg 55766591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 30496491 - 30496419
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||  |||||||| | | ||||||||||||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttg 30496419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 55830899 - 55830819
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgga-ttcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| ||||||||||||||||||||||||||||  | ||||||||||| ||||||| || | ||||| ||||||    
T  55830899 gggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttg 55830819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 40915802 - 40915865
Alignment:
Q  148 actggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||| | | ||||||||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttg 40915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 54966983 - 54967029
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  54966983 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcac 54967029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 44363294 - 44363248
Alignment:
Q  148 actggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtc 44363248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 49938610 - 49938552
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    |||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||    
T  49938610 ccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtctt 49938552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 35567146 - 35567206
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||| |||||||||||| || |||||||||| | ||||||| ||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttg 35567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 41018945 - 41018847
Alignment:
Q  158 ttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaatagtggg 257  Q
    ||||||||| |||||||||||||||||| |||||||| | | |||| |||||||  |       |||||||||||| | |||||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg--tgtaaaattagggtaaggctacgtacaatacaccaaatagtggg 41018848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 39077948 - 39077893
Alignment:
Q  156 agttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||| ||||||||||||| |||||||| | | ||||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttg 39077893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 43035224 - 43035267
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 43035267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 54175043 - 54175082
Alignment:
Q  155 aagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtc 54175082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 17043549 - 17043447
Alignment:
Q  155 aagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaatagt 254  Q
    |||||||||||| |||||||||||||||| | |||||||| | | ||||||||||||  |        ||||||||||||| ||||||||||||||| ||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatac-agggtaaggctgcgtacaatacaccaaatggt 17043451  T
Q  255 ggga 258  Q
    ||||    
T  17043450 ggga 17043447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 23580365 - 23580307
Alignment:
Q  153 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| |||||||||||||||||| |||||||  ||| || |||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttg 23580307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 47441699 - 47441646
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | ||||||||    
T  47441699 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtc 47441646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 49938759 - 49938689
Alignment:
Q  141 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||| |  ||||||||||||| |||||||||||||||| | |||||||| | | ||||||||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 49938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 12257764 - 12257692
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||| |||||| |||||||||||||||| |||| ||||||||||||| ||||| || ||| |||||| |||||    
T  12257764 ccttgacgcaac-ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttg 12257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 9987923 - 9987887
Alignment:
Q  222 tagggtaaggctgcatacaatacaccaaatagtggga 258  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9987923 tagggtaaggctgcatacaatacaccaaatggtggga 9987887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 19027823 - 19027867
Alignment:
Q  150 tggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtc 19027867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 50856407 - 50856352
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| ||||||||||||||||  ||| ||||||||||||| ||||||||    
T  50856407 ccttggcgcaac-ggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtc 50856352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 3580994 - 3580951
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtct 195  Q
    |||||||||||||||||||||||||| ||||||  |||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtct 3580951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 20373972 - 20373921
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    ||||||| |||||||||||||| |||||||| |||| ||||||||| |||||    
T  20373972 gggtaactttggcgcaactggtcaagttgttctcatatgactgaaatgtcac 20373921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 29879675 - 29879624
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    ||||||| |||| ||||||| |||||||||||||||||||||  ||||||||    
T  29879675 gggtaacattggtgcaactgataaagttgttgtcatgtgactagaaggtcac 29879624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 32629418 - 32629367
Alignment:
Q  160 gttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||| ||||| || | | ||||||||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttg 32629367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 7385628 - 7385594
Alignment:
Q  158 ttgttgtcatgtgactgaaaggtcacggattcaag 192  Q
    |||||||||||||||||||||||||||| ||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaag 7385594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 25343152 - 25343205
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||| | |||||||    
T  25343152 cttggcgcaa-tggtaaagttgttgtcacgtgactgataggtcacaggttcaagt 25343205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 25463108 - 25463158
Alignment:
Q  161 ttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||| |||||||| | | |||| |||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg 25463158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 30690340 - 30690282
Alignment:
Q  153 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| ||||||| |||||||||||||||||| |||||||| | | || |||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttg 30690282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 39029220 - 39029160
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||| ||||||| ||||||||  | |||||| ||| | ||||||||||||    
T  39029220 ggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttg 39029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 51420537 - 51420580
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||    
T  51420537 ccttggcgcaac-ggtgaagttgttgtcacgtgactgaaaggtca 51420580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 3815369 - 3815193
Alignment:
Q  18 aattgaattgccaaaactatcaagtcgttgtaaagggtagttcaaggttcaacttggttgaactgtctggttcacttcggtttgtaaaacattgttccat 117  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3815369 aattgaattgccaaaactatcaagtcattgtaaagggtggttcaaggttcaacttggttgaactgtctggttcacttcggtttttaaaacattgttccat 3815270  T
Q  118 aactaacaagaggagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3815269 aactaacaagaggggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtc 3815193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 1346921 - 1347044
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||  |        |||||||||    
T  1346921 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaac---agggtaagg 1347017  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  1347018 ctgcgtacaatacaccaaatggtggga 1347044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 1354933 - 1354810
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||  |        |||||||||    
T  1354933 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaagg 1354837  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  1354836 ctgcgtacaatacaccaaatggtggga 1354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 12222088 - 12222016
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttg 12222016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 8409200 - 8409279
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | ||| ||||||||    
T  8409200 gggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttg 8409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 14975255 - 14975179
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||    
T  14975255 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttg 14975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 12063422 - 12063503
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||| ||| || |||||||||    
T  12063422 gagggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttg 12063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 29356036 - 29355956
Alignment:
Q  132 gggtaaccttggcgcaactggtaaag-ttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  29356036 gggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 29355956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 9161080 - 9161159
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||    
T  9161080 gggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 9161159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 24734591 - 24734640
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 24734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 20400625 - 20400685
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagt 20400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 32728336 - 32728256
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    |||||||||||||| | |||  |||||||||||||||||||||||||||||||| ||||||||| || | |||| ||||||    
T  32728336 gagggtaaccttggtggaacgagtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctctt 32728256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 33923006 - 33922926
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgc 212  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| | |||||||| ||| |||  ||||||||    
T  33923006 gggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacgtcctcttgc 33922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 6024202 - 6024269
Alignment:
Q  144 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||| || ||| ||||||||||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttg 6024269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 1941812 - 1941874
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||| |||||    
T  1941812 gggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtc 1941874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 13905152 - 13905095
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||    
T  13905152 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtc 13905095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 15866215 - 15866137
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||||| || ||||| || | | |||||||||||    
T  15866215 gggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctctt 15866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 2166587 - 2166511
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||| | | |||| |||||||    
T  2166587 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg 2166511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 2178220 - 2178144
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||| | | |||| |||||||    
T  2178220 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg 2178144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 19649338 - 19649289
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggatt 188  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  19649338 cttggcgcaactgataaagttgttgtcatgtgactgaaagatcacggatt 19649289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 8417442 - 8417481
Alignment:
Q  145 gcaactggtaaagttgttgtcatgtgactgaaaggtcacg 184  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacg 8417481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 14553477 - 14553530
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtc 14553530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 12889390 - 12889462
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| |||| |||||||||||||||| |||| ||||||||||| | ||||||||||   ||||||||||||    
T  12889390 ccttggcacaac-ggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttg 12889462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 22967128 - 22967179
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||    
T  22967128 gggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcac 22967179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 23821265 - 23821214
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||    
T  23821265 gggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcac 23821214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 23930303 - 23930252
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacg 184  Q
    ||||||||||||||||||  ||||| |||||||||||| || ||||||||||    
T  23930303 ggtaaccttggcgcaactcataaagatgttgtcatgtgtctcaaaggtcacg 23930252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 2755583 - 2755553
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtc 181  Q
    |||||||||||||||||||||||||||||||    
T  2755583 ggtaaagttgttgtcatgtgactgaaaggtc 2755553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 24097545 - 24097590
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacg 184  Q
    |||||| ||||||||||| ||| |||||||| ||||||||||||||    
T  24097545 cttggcacaactggtaaaattgatgtcatgttactgaaaggtcacg 24097590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 12024096 - 12023972
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  12024096 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg--tgtaaaaacagggtaagg 12023999  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  12023998 ctgcgtacaatacaccaaatggtggga 12023972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 17896216 - 17896342
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||  |       ||||||||||    
T  17896216 gggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaagg 17896315  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||| ||||||| ||||||    
T  17896316 ctgcgtacaatataccaaatggtggga 17896342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 14530275 - 14530354
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  14530275 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 14530354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 25079896 - 25079817
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||    
T  25079896 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttg 25079817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 8455494 - 8455369
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  8455494 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacac-agggtaagg 8455396  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  8455395 ctgcgtacaatacaccaaatggtggga 8455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 23397723 - 23397846
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| | | ||||||||||||  |       ||||||||||    
T  23397723 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt---aaaatagggtaagg 23397819  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    || | ||||||||||||||| ||||||    
T  23397820 ctacgtacaatacaccaaatggtggga 23397846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 25249915 - 25249789
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| | | ||||| ||||||  |        |||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttg--tgtacaaacagggtaagg 25249818  T
Q  232 ctgcatacaatacaccaaatagtgggatc 260  Q
    |||| ||||||||||||||| ||||||||    
T  25249817 ctgcgtacaatacaccaaatggtgggatc 25249789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 10543655 - 10543734
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | | ||| ||||||||    
T  10543655 gggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttg 10543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 11514393 - 11514472
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || | | ||||||||||||    
T  11514393 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttg 11514472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 21779437 - 21779358
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |  |||||||||||    
T  21779437 gggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttg 21779358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7214491 - 7214570
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| ||||||    
T  7214491 gggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttg 7214570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 24200803 - 24200724
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||| | | ||||||||||||    
T  24200803 gggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttg 24200724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 22371014 - 22371090
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||| | | |||||||||    
T  22371014 gggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc 22371090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 27573581 - 27573657
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||   | ||||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttg 27573657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 5840985 - 5841060
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcct 207  Q
    |||||||||||| |||| || |||||||||||||||||||||| |||||||||| |||||||| ||| ||||||||    
T  5840985 gggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagcct 5841060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 17705452 - 17705531
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||| | | ||| ||||||||    
T  17705452 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttg 17705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 9671137 - 9671261
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgact-gaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaag 230  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||| || | | ||||||||||||  |        ||||||||    
T  9671137 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaac---agggtaag 9671233  T
Q  231 gctgcatacaatacaccaaatagtggga 258  Q
    ||||| ||||||||||||||| ||||||    
T  9671234 gctgcgtacaatacaccaaatggtggga 9671261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 19977892 - 19977814
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||  | | |||||||||||    
T  19977892 gggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctctt 19977814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 99434 - 99362
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||    
T  99434 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttg 99362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 14544020 - 14544068
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggt 180  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14544020 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggt 14544068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 39189599 - 39189556
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactga 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39189599 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 4516522 - 4516450
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||  ||| ||||||||||||    
T  4516522 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttg 4516450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 17667973 - 17668021
Alignment:
Q  146 caactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 17668021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 27466306 - 27466262
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  27466306 gtaacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 26684800 - 26684750
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  26684800 gggtaactttagcgcaactggtaaagttgttgtcatgtgattgaaaggtca 26684750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 17380407 - 17380335
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||||| |||||||||| | |||| |||||||    
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttg 17380335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 17623535 - 17623600
Alignment:
Q  146 caactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||| | | |||| |||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttg 17623600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 40417031 - 40416970
Alignment:
Q  150 tggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| | | |||| |||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttg 40416970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 21377232 - 21377172
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||| |||  |||||||| ||| |||| |||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttg 21377172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 39914475 - 39914431
Alignment:
Q  141 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgg 39914431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 17472928 - 17473003
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcct 207  Q
    ||||||||||| |||||||  ||||||||||||||  ||| ||||||||||||| |||| ||||||| || |||||    
T  17472928 gggtaaccttgacgcaactaataaagttgttgtcaaatgattgaaaggtcacgggttcaggtcttagaaatagcct 17473003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 31158598 - 31158539
Alignment:
Q  153 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgc 212  Q
    |||||||||||||||||||||||||||||| || || |||||||   |||||||||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgc 31158539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 5450263 - 5450301
Alignment:
Q  153 taaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaa 5450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 24860157 - 24860111
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgg 24860111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 35017781 - 35017837
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgac-tgaaaggtcacggattcaagtc 194  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  35017781 ccttggcgcaac-ggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtc 35017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 44604826 - 44604890
Alignment:
Q  147 aactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||| |||||||||||||||||||||| |||||||| | |||||||| | | |||| |||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttg 44604890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 44643486 - 44643557
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||  |||||||  ||| || ||||||||    
T  44643486 ccttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctctt 44643557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 33795261 - 33795304
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtc 33795304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 25641487 - 25641521
Alignment:
Q  160 gttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||| ||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtc 25641521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 45235976 - 45235918
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    ||||||||||| ||||||||||||||| |||||  |||||||| ||| ||||| |||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctctt 45235918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 23145857 - 23145812
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    ||||||||||||||   |||||||||||||||||| ||||||||||    
T  23145857 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtctt 23145812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 23557647 - 23557602
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    ||||||||||||||   |||||||||||||||||| ||||||||||    
T  23557647 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtctt 23557602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 34752820 - 34752779
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagt 34752779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 39499390 - 39499353
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtga 171  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  39499390 gtaatcttggcgcaactggtaaagttgttatcatgtga 39499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 29420048 - 29419988
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||  ||||||||||||||||  |||||||| | | |||| |||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttg 29419988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 12670426 - 12670303
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  12670426 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaagg 12670330  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  12670329 ctgcgtacaatacaccaaatggtggga 12670303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 30454273 - 30454194
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  30454273 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 30454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 13160659 - 13160783
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||  |        |||||||||    
T  13160659 gggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttg--tgtaaaaacagggtaagg 13160756  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  13160757 ctgcgtacaatacaccaaatggtggga 13160783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 20869671 - 20869595
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  20869671 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 39461174 - 39461095
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | | ||||||||||||    
T  39461174 gggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttg 39461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 36720753 - 36720878
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  36720753 gggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaac-agggtaagg 36720851  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  36720852 ctgcgtacaatacaccaaatggtggga 36720878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 2626476 - 2626555
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||    
T  2626476 gggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 2626555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 17823533 - 17823612
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||    
T  17823533 gggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 17823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 28817804 - 28817725
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  28817804 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 28817725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 20284250 - 20284172
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20284172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 21070879 - 21070801
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 21070801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 24245408 - 24245470
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24245408 gggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 24245470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 28407379 - 28407452
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 28407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 29521863 - 29521738
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  29521863 gggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg-tttaaaaaacagggtaagg 29521765  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  29521764 ctgcgtacaatacaccaaatggtggga 29521738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 44530106 - 44530231
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||||| | |||| |||||||  |        |||||||||    
T  44530106 gggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaac-agggtaagg 44530204  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  44530205 ctgcgtacaatacaccaaatggtggga 44530231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 35261636 - 35261696
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaag 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  35261636 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 35261696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7136707 - 7136628
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| | | |||| |||||||    
T  7136707 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttg 7136628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 18164937 - 18164858
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  18164937 gggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 18164858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 11748256 - 11748334
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    ||||||| |||| ||||||||| || |||||||||||||||||||| ||||||| |||||||||| | |||||||||||    
T  11748256 gggtaactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctctt 11748334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 45071222 - 45071346
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||  |||||||||||||||||||||||| || |||||||||| |||||||  | | ||||||||||||  |        |||||||||    
T  45071222 gggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttg--tgtaaaaacagggtaagg 45071319  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  45071320 ctgcgtacaatacaccaaatggtggga 45071346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 6760786 - 6760858
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||| |||||||| | | ||||||||||||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttg 6760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 25250480 - 25250530
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  25250480 ggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcac 25250530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 26954089 - 26954206
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||| |||||| || |||||||||||||||||||||| |  |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  26954089 gggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagg 26954188  T
Q  232 ctgcatacaatacaccaa 249  Q
    |||| |||||||||||||    
T  26954189 ctgcgtacaatacaccaa 26954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 24365218 - 24365112
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaat 251  Q
    |||||||||||||||||||||| ||| ||||||| |||||| | ||| ||||||||||||  |        |||||||||||||  ||||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaat 24365119  T
Q  252 agtggga 258  Q
     ||||||    
T  24365118 ggtggga 24365112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 30962944 - 30962872
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||  |||||||| | | ||||||||||||    
T  30962944 ccttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttg 30962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 42083870 - 42083802
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcct 207  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||| | | ||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcct 42083802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 44781677 - 44781605
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||| | | |||| |||||||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttg 44781605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 8897940 - 8897880
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||| |||| ||||||||||||||||||||||||||| | |||||||||| || |||||    
T  8897940 gtaaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtc 8897880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 23286471 - 23286431
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 172  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  23286471 gggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 23286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 40605083 - 40605044
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtga 171  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  40605083 gggtaactttggcgcaactggtaaagttgttgtcatgtga 40605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 31454145 - 31454196
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||| ||||||||||| |||| |||||||||||||||  |||||||||||    
T  31454145 gggtaatcttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcac 31454196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 42840866 - 42840900
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtca 166  Q
    ||||||||||||||||||| |||||||||||||||    
T  42840866 gggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 31457155 - 31457192
Alignment:
Q  157 gttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtc 31457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 35105902 - 35105959
Alignment:
Q  154 aaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| ||| |||||||||||||| |||||||| | | |||| |||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttg 35105959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 5688801 - 5688829
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcat 167  Q
    |||||||||||||||||||||||||||||    
T  5688801 cttggcgcaactggtaaagttgttgtcat 5688829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 11001109 - 11001069
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    ||||||||||||||||||||| ||||||||| ||| |||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaa 11001069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 22598133 - 22598173
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaa 22598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 33867039 - 33867083
Alignment:
Q  271 ttcccgaaccctgcgtatgcaaaagctttag-gcaccaggttgcc 314  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||    
T  33867039 ttcccgaaccctgcgtatgcagaagctttagtgcaccgggttgcc 33867083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 38879538 - 38879617
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  38879538 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 38879617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 43334157 - 43334277
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||| ||  |        |||||||    
T  43334157 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaa 43334256  T
Q  230 ggctgcatacaatacaccaaa 250  Q
    |||||| ||||||||||||||    
T  43334257 ggctgcgtacaatacaccaaa 43334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 41014276 - 41014400
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  41014276 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg--tgtaaaaacagggtaagg 41014373  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  41014374 ctgcgtacaatacaccaaatggtggga 41014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 24448847 - 24448972
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | |||||||| |||  |       ||||||||||    
T  24448847 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgt-aaaaaatagggtaagg 24448945  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  24448946 ctgcgtacaatacaccaaatggtggga 24448972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 35710270 - 35710393
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | | ||||||||||||  |       ||||||||||    
T  35710270 gggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt---aaaatagggtaagg 35710366  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| | ||||||||||||| ||||||    
T  35710367 ctgcgttcaatacaccaaatggtggga 35710393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 37024732 - 37024653
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  37024732 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 37024653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 4619285 - 4619205
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | || |||||||||    
T  4619285 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttg 4619205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 22861845 - 22861765
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  22861845 agggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttg 22861765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 1565388 - 1565467
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | | |||| |||||||    
T  1565388 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttg 1565467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 8170157 - 8170037
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctg 234  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | | |||||||| |||  |        ||||||||||||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaac---agggtaaggctg 8170061  T
Q  235 catacaatacaccaaatagtggga 258  Q
    | ||||||||||||||| ||||||    
T  8170060 cgtacaatacaccaaatggtggga 8170037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 2838735 - 2838862
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactg-aaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaag 230  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||   |||||||| || |||||| |||||  |        ||||||||    
T  2838735 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttg--tgtaaaaacagggtaag 2838832  T
Q  231 gctgcatacaatacaccaaatagtgggatc 260  Q
    ||||| ||||||||||||||| ||||||||    
T  2838833 gctgcgtacaatacaccaaatggtgggatc 2838862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 39301087 - 39301159
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttg 39301159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 27328708 - 27328788
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||| | | ||||| ||||||    
T  27328708 agggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttg 27328788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 23974738 - 23974816
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| | | |||| |||||||    
T  23974738 gggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttg 23974816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 31299591 - 31299668
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||   |||||||| ||| ||||||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttg 31299668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 22187242 - 22187321
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| | || ||||| | | ||||||||||||    
T  22187242 gggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttg 22187321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 19438706 - 19438760
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgga 186  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  19438706 gggtaaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcacgga 19438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 39079937 - 39079880
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtctt 39079880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 30006280 - 30006344
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||| |||| |||||||||||| |||| |||||||||||||||||||||||||  ||||||||||    
T  30006280 gaggttaacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtc 30006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 12006509 - 12006455
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    |||||| | |||||||||||| | |||||||||||||||||||||||||||||||    
T  12006509 agggtagctttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacgg 12006455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 22600411 - 22600473
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||| || |||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  22600411 gggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtc 22600473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 28516593 - 28516533
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||| | |||| |||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttg 28516533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 32703411 - 32703504
Alignment:
Q  162 tgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaatagtggga 258  Q
    |||||||||||||||||||||||| |||||||| | | ||||||||||||  |        ||||||||||||| ||||||||||||||| ||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaaggctgcgtacaatacaccaaatggtggga 32703504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 10634317 - 10634248
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||| || |||||||| ||| |||| ||||    
T  10634317 ccttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctc 10634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 9794466 - 9794429
Alignment:
Q  223 agggtaaggctgcatacaatacaccaaatagtgggatc 260  Q
    |||||||| |||||||||||||||||||||||||||||    
T  9794466 agggtaagactgcatacaatacaccaaatagtgggatc 9794429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 1850624 - 1850659
Alignment:
Q  159 tgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||||||||||||||||| ||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtc 1850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 17419870 - 17419933
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||  |||||| |||||||||| ||||||| ||||||||||||||| |||  ||||||||    
T  17419870 agggtaattttggcgtaactggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtc 17419933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 41956889 - 41956924
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcat 167  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41956889 gggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 43574555 - 43574605
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    ||||| ||||||||||| || |||||||||||||| ||||||||||||||||    
T  43574555 gggtagccttggcgcaa-tgataaagttgttgtcacgtgactgaaaggtcac 43574605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 209098 - 209054
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||    
T  209098 ccttggcgcagc-ggtaaagttgttgtcatgtgactaaaaggtcac 209054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 182
Target Start/End: Complemental strand, 28208264 - 28208235
Alignment:
Q  153 taaagttgttgtcatgtgactgaaaggtca 182  Q
    ||||||||||||||||||||||||||||||    
T  28208264 taaagttgttgtcatgtgactgaaaggtca 28208235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 31362495 - 31362454
Alignment:
Q  150 tggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    |||||||||||||||||||||| || |||||||||| |||||    
T  31362495 tggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 34074717 - 34074661
Alignment:
Q  155 aagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||  |||||||||||||||   |||||||| ||| ||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttg 34074661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 8247867 - 8247788
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  8247867 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 8247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 10870129 - 10870050
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  10870129 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10870050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 13730782 - 13730703
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  13730782 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 13730703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 46421215 - 46421136
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | | ||||||||||||    
T  46421215 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttg 46421136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 52926388 - 52926309
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  52926388 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 52926309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 16735420 - 16735544
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  16735420 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttg--tagaaaaacagggtaagg 16735517  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  16735518 ctgcgtacaatacaccaaatggtggga 16735544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 1217069 - 1217148
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| | | ||||||||||||    
T  1217069 gggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttg 1217148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7697063 - 7696984
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | | ||||| ||||||    
T  7697063 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttg 7696984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 29366900 - 29366821
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| | | ||||||||||||    
T  29366900 gggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttg 29366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 22609746 - 22609869
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||||||| | ||||||||||||  |        |||||||||    
T  22609746 gggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttg--tgtaaaaacagggtaagg 22609842  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  22609843 ctgcgtacaatacaccaaatggtggga 22609869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 40272990 - 40272865
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| | | |||| |||||||  |        |||||||||    
T  40272990 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaac-agggtaagg 40272892  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  40272891 ctgcgtacaatacaccaaatggtggga 40272865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 9607182 - 9607262
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgc 212  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||  | |||||||| | | |||||||||||||    
T  9607182 gggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgc 9607262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 13628971 - 13628891
Alignment:
Q  132 gggtaaccttggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  13628971 gggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 13628891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 39203495 - 39203574
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||    
T  39203495 gggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttg 39203574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 4495842 - 4495780
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  4495842 gggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 4495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 5173899 - 5173819
Alignment:
Q  132 gggtaaccttggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | | |||| |||||||    
T  5173899 gggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg 5173819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 22123092 - 22122970
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggc 232  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||| | | ||||| ||||||  |        ||||||||||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaac---agggtaaggc 22122996  T
Q  233 tgcatacaatacaccaaatagtggga 258  Q
    ||| ||||||||||||||| ||||||    
T  22122995 tgcgtacaatacaccaaatggtggga 22122970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 26869696 - 26869810
Alignment:
Q  142 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaa 241  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| | | |||||||||| |  |        ||||||||||||| |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctgg--tgtaaaaacagggtaaggctgcgtacaa 26869793  T
Q  242 tacaccaaatagtggga 258  Q
    |||||||||| ||||||    
T  26869794 tacaccaaatggtggga 26869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 6411999 - 6411920
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| || ||||||||||   ||||||||||||    
T  6411999 gggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttg 6411920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 12914213 - 12914134
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||   |||||||| | | ||||||||||||    
T  12914213 gggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttg 12914134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 25517348 - 25517300
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25517348 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 26782343 - 26782407
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||| ||||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  26782343 gagggtaaccttgacgcaattggtaaagttattgtcatgcgattgaaaggtcacggattcaagtc 26782407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 45621000 - 45620881
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcat 237  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||  | | ||||||||||||  |        ||||||||||||| |    
T  45621000 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgt 45620902  T
Q  238 acaatacaccaaatagtggga 258  Q
    |||||||||||| | ||||||    
T  45620901 acaatacaccaattggtggga 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 26573113 - 26573182
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| | | |||||||||    
T  26573113 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 26573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 34420815 - 34420743
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||| | | ||||||||||||    
T  34420815 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 34420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 21874999 - 21875042
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactga 175  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactga 21875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 12525389 - 12525465
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||   |||||||| ||||||||||||||| | ||| |||| | | ||||||||||||    
T  12525389 gggtaaccttggcgcaactggtaaa---gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttg 12525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 53062036 - 53062093
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    ||||||||||||||||||||||||||||||||||  |||||||| | | |||||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 23871415 - 23871455
Alignment:
Q  129 ggagggtaaccttggcgcaactggtaaagttgttgtcatgt 169  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  23871415 ggagggtaaccttggcgcaactagtaaagttgttgtcatgt 23871455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 30928302 - 30928246
Alignment:
Q  155 aagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||| ||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 30928246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 7942993 - 7943048
Alignment:
Q  156 agttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||| ||||||||||||||||||| | | |||||| |||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttg 7943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 516417 - 516467
Alignment:
Q  161 ttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 35417902 - 35417974
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||||  ||||| || | | ||||||||||||    
T  35417902 ccttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttg 35417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 9276253 - 9276289
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatg 168  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9276253 gggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 25944455 - 25944510
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| | |||||||||||||| ||||||||||||||| || ||||||||    
T  25944455 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcatgggttcaagtc 25944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 31831265 - 31831294
Alignment:
Q  222 tagggtaaggctgcatacaatacaccaaat 251  Q
    ||||||||||||||||||||||||||||||    
T  31831265 tagggtaaggctgcatacaatacaccaaat 31831294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 52428565 - 52428532
Alignment:
Q  223 agggtaaggctgcatacaatacaccaaatagtgg 256  Q
    ||||||||||||| ||||||||||||||||||||    
T  52428565 agggtaaggctgcgtacaatacaccaaatagtgg 52428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 53996737 - 53996665
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||| || |||||| |||||||||| ||||||||||||||||  |||||||| | | |||| |||||||    
T  53996737 ccttggcgctac-ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttg 53996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 19731000 - 19731060
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| ||||||||| |||| ||||||||||||||| |||||| | | || |||||||||    
T  19731000 ggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttg 19731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 31542411 - 31542451
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    ||||||||||||||||| ||| |||||||||||| ||||||    
T  31542411 ggtaaagttgttgtcatatgattgaaaggtcacgaattcaa 31542451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 33235513 - 33235561
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgac-tgaaaggtcac 183  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||    
T  33235513 aaccttgatgcagctggtaaagttgttgtcatgtgacatgaaaggtcac 33235561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 45288111 - 45288059
Alignment:
Q  263 gggaccttttcccgaaccctgcgtatgcaaaagctttag-gcaccaggttgcc 314  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||||||| ||||    
T  45288111 gggacctcttcccggaccctgcgtatgcaagagctttagtgcaccaggctgcc 45288059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 45948927 - 45948891
Alignment:
Q  222 tagggtaaggctgcatacaatacaccaaatagtggga 258  Q
    |||||||||||||||||||||||||||| | ||||||    
T  45948927 tagggtaaggctgcatacaatacaccaattggtggga 45948891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 34725274 - 34725195
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  34725274 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 34725195  T

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Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 32632734 - 32632610
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  32632734 gggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttg--tgtaaaaacagggtaagg 32632637  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  32632636 ctgcgtacaatacaccaaatggtggga 32632610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 38478458 - 38478379
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  38478458 gggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttg 38478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 46248131 - 46248052
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||||    
T  46248131 gggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttg 46248052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 14617018 - 14617097
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| | | ||||||||||||    
T  14617018 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttg 14617097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 18944623 - 18944702
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | | | ||||||||||||    
T  18944623 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttg 18944702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 22930245 - 22930170
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | | ||||||||    
T  22930245 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcct 22930170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 47214491 - 47214570
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| ||||||    
T  47214491 gggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttg 47214570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 34714603 - 34714665
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  34714603 gggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtc 34714665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 40424722 - 40424784
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  40424722 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtc 40424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20004270 - 20004193
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctct 209  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||    
T  20004270 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctct 20004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 25290142 - 25290207
Alignment:
Q  131 agggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  25290142 agggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtctt 25290207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 45812713 - 45812590
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |   ||||| ||||||  |        |||||||||    
T  45812713 gggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag---agggtaagg 45812617  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||||||||||||||||||| ||||||    
T  45812616 ctgcatacaatacaccaaatggtggga 45812590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 30395903 - 30395827
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| | | ||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttg 30395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 33222971 - 33223043
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttg 33223043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 18742137 - 18742070
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaa 18742070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 23768500 - 23768373
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaa 229  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||| | |||||||| | | ||||||||||||  |        |||||||    
T  23768500 gagggtaacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaac-agggtaa 23768402  T
Q  230 ggctgcatacaatacaccaaatagtggga 258  Q
    |||||| ||||||||||||||| ||||||    
T  23768401 ggctgcgtacaatacaccaaatggtggga 23768373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 27474261 - 27474340
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||| ||||||    
T  27474261 gggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttg 27474340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 46991784 - 46991863
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| | | |||| |||||||    
T  46991784 gggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttg 46991863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 8197023 - 8197085
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8197023 gggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 8197085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 19414420 - 19414497
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    ||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||| ||| || ||||||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctctt 19414497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 19932930 - 19932869
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  19932930 gggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 10668200 - 10668284
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtc-----atgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||     |||||||||||||||||||| |||||||| | | ||||||||||||    
T  10668200 gggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10668284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 18724715 - 18724644
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 18724644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 27201627 - 27201706
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||| || |||||||| | | ||||||||||||    
T  27201627 gggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttg 27201706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 45402077 - 45402153
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||| | | ||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttg 45402153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 20036208 - 20036262
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 20036262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 41319984 - 41319933
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  41319984 gggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcac 41319933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 2435958 - 2435889
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| | | |||||||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 2435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 4430197 - 4430140
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| || |||||||    
T  4430197 cttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtctt 4430140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 9939443 - 9939520
Alignment:
Q  135 taaccttggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||| | | |||| |||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttg 9939520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 52910204 - 52910275
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| | ||||| |||| | |||||||||||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 6925096 - 6925159
Alignment:
Q  148 actggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| | | || |||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttg 6925159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 24564324 - 24564403
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||  ||||||||| |||| ||||| ||||||||| | |||||||||||| | |||| |||||||    
T  24564324 gggtaaccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttg 24564403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 6983980 - 6983911
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| | |||||||| | | |||||||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc 6983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 12127010 - 12126960
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgg 12126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 17470517 - 17470445
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| ||||| |||||||||||||||| ||||||||| ||||| || |||||||| ||| ||||||||||||    
T  17470517 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttg 17470445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 22327086 - 22327158
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||| |||||||| | | |||| |||||||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttg 22327158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 50811926 - 50811998
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| ||| ||| | | |||||| |||||    
T  50811926 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttg 50811998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 2436064 - 2436009
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  2436064 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 2436009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 11596501 - 11596572
Alignment:
Q  139 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| |||||||| | |||||||||||||||| ||||||| |||||||| ||| |||| |||||||    
T  11596501 cttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttg 11596572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 35019217 - 35019272
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||    
T  35019217 ccttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtc 35019272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 35117927 - 35117867
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||| |||||||||||||||||| |||||||| | | || |||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttg 35117867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 18335465 - 18335415
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||||||| || ||||||| |||||||||| ||||||||||||    
T  18335465 ggtaaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcac 18335415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 21723644 - 21723686
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 174  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  21723644 gggtaaccttcgcacaactggtaaagttgttgtcatgtgactg 21723686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 21006125 - 21006174
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    |||||||||| |||||| |||||| ||||||||||| |||||||||||||    
T  21006125 ggtaaccttgacgcaaccggtaaaattgttgtcatgcgactgaaaggtca 21006174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 50760397 - 50760325
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||  |||||||| |||||||||||||||| ||||||||| |||||||| |   ||||||||||||    
T  50760397 ccttggcgcaaa-ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttg 50760325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 10378896 - 10378841
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||| ||||||||    
T  10378896 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtc 10378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 18336024 - 18335973
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||| |||||||||| || ||||||||||| |||||| ||||||||||||    
T  18336024 gggtaatcttggcgcaagtgataaagttgttgccatgtgtctgaaaggtcac 18335973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 25468421 - 25468362
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||| |||||||||| || |||||||| | | |||| |||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttg 25468362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 28894704 - 28894658
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||||    
T  28894704 aaccttggcgcaacag-taaagttgttgtcatgtgactgaaaagtcac 28894658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 44485280 - 44485234
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgg 185  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||    
T  44485280 ccttggcgcaacag-taaagttgttgtcatgtgattgaaaggtcacgg 44485234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 10163739 - 10163777
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtg 170  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  10163739 gggtaacattggcgcaactgataaagttgttgtcatgtg 10163777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 15511322 - 15511278
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  15511322 ccttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcac 15511278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 19701557 - 19701629
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| | ||||||||||||| ||||||||||| ||||||| || ||||| |   ||||||||||||    
T  19701557 ccttggcgcaacag-taaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttg 19701629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 23371111 - 23371183
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| | |||||||||| ||   ||||||||||||||||| |||||||| ||| ||||||| ||||    
T  23371111 ccttggcgcaacag-taaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaacagccacttg 23371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 4212268 - 4212208
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    |||||||||| ||| ||  ||||||||||| |||| |||||||||||||||  ||||||||    
T  4212268 ggtaaccttgacgcgacgagtaaagttgttatcatatgactgaaaggtcacatattcaagt 4212208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 10228 - 10147
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  10228 gagggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 20556 - 20475
Alignment:
Q  130 gagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  20556 gagggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 8902 - 8964
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| ||||| | ||||||||    
T  8902 gggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 19230 - 19292
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| ||||| | ||||||||    
T  19230 gggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 21172185 - 21172062
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||    
T  21172185 gggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaac---agggtaagg 21172089  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  21172088 ctgcgtacaatacaccaaatggtggga 21172062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 32758218 - 32758297
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||    
T  32758218 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 32758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 42496013 - 42495934
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | | ||||||||||||    
T  42496013 gggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 42495934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 42798626 - 42798705
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||| ||||||    
T  42798626 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttg 42798705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 47078031 - 47077952
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| ||||||    
T  47078031 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttg 47077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 48735299 - 48735237
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48735299 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 48735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 10693245 - 10693126
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgc 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||  |        |||||||||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag---agggtaaggctgc 10693149  T
Q  236 atacaatacaccaaatagtggga 258  Q
     ||||||||||||||| ||||||    
T  10693148 gtacaatacaccaaatggtggga 10693126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 2541198 - 2541118
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgact-gaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||    
T  2541198 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttg 2541118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 42805481 - 42805560
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||    
T  42805481 gggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 42805560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 43557429 - 43557508
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| | | ||||||||||||    
T  43557429 gggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttg 43557508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 19427059 - 19426942
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatac 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||  |       ||||||||| |||| |||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaaatagggtaagactgcgtac 19426961  T
Q  240 aatacaccaaatagtggga 258  Q
    |||||||||||| ||||||    
T  19426960 aatacaccaaatggtggga 19426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 40463837 - 40463913
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| ||| ||||| ||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttg 40463913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7193042 - 7193121
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | | |||| |||||||    
T  7193042 gggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttg 7193121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 14732999 - 14732924
Alignment:
Q  133 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| | | |||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctc 14732924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 18326991 - 18327070
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||   | ||||||||||||    
T  18326991 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttg 18327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 46354151 - 46354230
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| | | |||| |||||||    
T  46354151 gggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttg 46354230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 27629596 - 27629670
Alignment:
Q  137 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| | | ||||||||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 27629670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 29140542 - 29140477
Alignment:
Q  128 aggagggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  29140542 aggagggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagt 29140477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 42476830 - 42476891
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42476830 gggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagt 42476891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 7794682 - 7794606
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctctt 210  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 34626385 - 34626309
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctc 208  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||| | | |||||||||    
T  34626385 gggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctc 34626309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 5180335 - 5180276
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  5180335 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 5180276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 11617762 - 11617687
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| | | |||| |||||||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttg 11617687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21447547 - 21447626
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||| |||| |||||||||||| | || |||||||||||||||||||||   ||||||||||||    
T  21447547 gggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttg 21447626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 35334989 - 35334930
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  35334989 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtc 35334930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 47716416 - 47716495
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||| ||||||| |||||||||| |||||||||| |||||||||| |||||||| | | ||||||||||||    
T  47716416 gggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 47716495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 22699148 - 22699086
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  22699148 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtc 22699086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 1424085 - 1424029
Alignment:
Q  135 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaa 191  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaa 1424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 28078309 - 28078237
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacag 204  Q
    |||||||| |||||||||| || |||||||||||||||||||| |||||||||| |||||||| ||| |||||    
T  28078309 gggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 28078237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 19265781 - 19265896
Alignment:
Q  140 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatac 239  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| |  |||||| ||||  |        ||||||||||||| |||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttg--tgtaaaaagagggtaaggctgcgtac 19265877  T
Q  240 aatacaccaaatagtggga 258  Q
    |||||||||||| ||||||    
T  19265878 aatacaccaaatggtggga 19265896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 3469350 - 3469286
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaaca 203  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||| ||||    
T  3469350 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaaca 3469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 28362316 - 28362244
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| ||| ||||||||    
T  28362316 ccttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttg 28362244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 13805066 - 13805121
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  13805066 ccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtc 13805121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 29907393 - 29907455
Alignment:
Q  151 ggtaaagttgttgt--catgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttg 29907455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 8149124 - 8149062
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||| |||||||||| |||||||||||||||||| || ||||||  ||||||||    
T  8149124 gggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtc 8149062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 12473261 - 12473323
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||| |||||||||||| |||||||||||||||||||  ||||||||||| || ||||||||    
T  12473261 gggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtc 12473323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 25198679 - 25198725
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 178  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcatatgactgaaag 25198725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 33872070 - 33872008
Alignment:
Q  149 ctggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||| | | |||| |||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttg 33872008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 2663109 - 2662988
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaagg 231  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |  ||||  | |||||||| | | ||||||||||||  |       ||||||||||    
T  2663109 gggtaaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgt---aaaatagggtaagg 2663015  T
Q  232 ctgcatacaatacaccaaatagtggga 258  Q
    |||| ||||||||||||||| ||||||    
T  2663014 ctgcgtacaatacaccaaatggtggga 2662988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 48123655 - 48123583
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||| || |||||||| | | ||||||||||||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttg 48123583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 42391251 - 42391153
Alignment:
Q  157 gttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaatagtgg 256  Q
    ||||||||||||||||||||||||||||| |||||||| | | |||||| |||||  |        ||||||||||||| ||||||||||||||| ||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaac---agggtaaggctgcgtacaatacaccaaatggtgg 42391155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 6736867 - 6736909
Alignment:
Q  152 gtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtc 6736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 28685299 - 28685257
Alignment:
Q  145 gcaactggtaaagttgttgtcatgtgactgaaaggtcacggat 187  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  28685299 gcaactgttaaagttgttgtcatgtgactgaaagatcacggat 28685257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 39123857 - 39123926
Alignment:
Q  141 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||| |||||||||||||||||||||||||||| | ||||| |||||||| ||| ||| | ||||||    
T  39123857 tggcgcaa-tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttg 39123926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 7644931 - 7644992
Alignment:
Q  150 tggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||| ||||||| | |||||||||||||||||| |||||||| | | ||||||||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 7644992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 19266414 - 19266534
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcat 237  Q
    |||||| ||||| |||||||||||||||||||||||||||||||  || |||||||| |   || |||| ||||| |        ||||||||||||| |    
T  19266414 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaac-agggtaaggctgcgt 19266511  T
Q  238 acaatacaccaaatagtgggatc 260  Q
    |||||||||||||| ||||||||    
T  19266512 acaatacaccaaattgtgggatc 19266534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 23419845 - 23419773
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||| | |||||||  | | ||||||||||||    
T  23419845 ccttggcgcaac-ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttg 23419773  T

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Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 11741774 - 11741877
Alignment:
Q  154 aaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggctgcatacaatacaccaaatag 253  Q
    ||||||||||||||||||||||||||||| || |||||||| |   |||||| ||| |  |       |||||||||||||| ||||||||||||||| |    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaa---tagggtaaggctgcgtacaatacaccaaatgg 11741870  T
Q  254 tgggatc 260  Q
    |||||||    
T  11741871 tgggatc 11741877  T

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Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 182
Target Start/End: Complemental strand, 14099165 - 14099134
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    ||||||||||||||||||||||||||||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtca 14099134  T

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Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 182
Target Start/End: Complemental strand, 14409182 - 14409151
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtca 182  Q
    ||||||||||||||||||||||||||||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtca 14409151  T

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Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 45019054 - 45019007
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaagg 179  Q
    |||||||||||||||||||||||||| |  ||||||||||||| ||||    
T  45019054 gggtaaccttggcgcaactggtaaaggtcctgtcatgtgactggaagg 45019007  T

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Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 44123792 - 44123720
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||| ||||| |||||||||| ||||||||||||||||| | |||| |||||||  | | ||||||||||||    
T  44123792 ccttggtgcaac-ggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttg 44123720  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 1524345 - 1524285
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||| ||||||| | ||||||||||||||   |||||||||||  ||||||||||||    
T  1524345 ggtaaagtggttgtcacgagactgaaaggtcacaagttcaagtcttataaacagcctcttg 1524285  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 5814433 - 5814489
Alignment:
Q  137 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    ||||||||||||  |||||||||||||| |||||| || || ||||||| |||||||    
T  5814433 accttggcgcaatcggtaaagttgttgttatgtgattggaaagtcacgggttcaagt 5814489  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 16341254 - 16341314
Alignment:
Q  151 ggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||| ||||||   ||||||||||||| |||||||  ||| ||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttg 16341314  T

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Target: scaffold0168 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 30536 - 30615
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||    
T  30536 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttg 30615  T

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Target: scaffold0258 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 13201 - 13121
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgc 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| | | |||||||||||||    
T  13201 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgc 13121  T

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Target: scaffold0258; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 17547 - 17507
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 172  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  17547 gggtaaccttaacgcaactgctaaagttgttgtcatgtgac 17507  T

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Target: scaffold0024 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 83832 - 83896
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtctt 196  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  83832 gggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtctt 83896  T

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Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 24945 - 24883
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  24945 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 24883  T

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Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 46794 - 46849
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagt 46849  T

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Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 47054 - 46999
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||  ||||||||    
T  47054 ccttggcgcaa-tagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtc 46999  T

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Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 58936 - 59013
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||| | | ||||||||||||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 59013  T

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Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 11093 - 11167
Alignment:
Q  136 aaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||| | | ||||||||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 11167  T

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Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 10773 - 10827
Alignment:
Q  138 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaag 192  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 10827  T

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Target: scaffold1176 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 1758 - 1701
Alignment:
Q  137 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 1701  T

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Target: scaffold0254 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 4117 - 4193
Alignment:
Q  134 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||| | | |||| |||||||    
T  4117 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttg 4193  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 43085 - 43165
Alignment:
Q  133 ggtaaccttggcgc--aactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttg 211  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||  |||| ||| ||| ||||||||||||    
T  43085 ggtaaccttggcgcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttg 43165  T

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Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 24621 - 24683
Alignment:
Q  132 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 194  Q
    ||||||||||||| ||| || |||||||||||||| ||||||| |||||||||| ||||||||    
T  24621 gggtaaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtc 24683  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 35194 - 35070
Alignment:
Q  135 taaccttggcgcaactggtaaagttg-ttgtcatgtgactgaaaggtcacggattcaagtcttaggaacagcctcttgcctnnnnnnntagggtaaggct 233  Q
    |||| |||| |||||||||||||||  |||||||||||||| |||||||||| |||||||| |   ||||| ||||||  |        |||||||||||    
T  35194 taactttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggct 35095  T
Q  234 gcatacaatacaccaaatagtggga 258  Q
    || ||||||||||||||| ||||||    
T  35094 gcgtacaatacaccaaatggtggga 35070  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  137 accttggcgcaactggtaaagttgttgtcatgtg 170  Q
    ||||||||||||||||||||||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 8865 - 8899
Alignment:
Q  149 ctggtaaagttgttgtcatgtgactgaaaggtcac 183  Q
    |||||||||||||||||||||||||| ||||||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcac 8899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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