View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1093_high_14 (Length: 286)
Name: NF1093_high_14
Description: NF1093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1093_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 4858675 - 4858504
Alignment:
| Q |
52 |
aaattgacctttacaatgtattttctttttccttcnnnnnnnnnn-gtattttctttgatatttgataacaatacatcttttatttattctgaattcaat |
150 |
Q |
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| T |
4858675 |
aaattgacctttacaatgtattttctttttccttcaaaaaaaatatgtattttctttgatatttgataacaatacatcttttatttattcagaattcaat |
4858576 |
T |
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| Q |
151 |
gtacaatttattgtatgtaaaagcttgttacgtgaacataacatagctcaatagtcacaatcacacttgtttg |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
4858575 |
gtacaatttattgtatgtaaaagcttgttacgtgaacataacata-ctcaatagtcacaatcacacttgtttg |
4858504 |
T |
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