View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1093_low_22 (Length: 338)

Name: NF1093_low_22
Description: NF1093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1093_low_22
NF1093_low_22
[»] chr7 (83 HSPs)
chr7 (9-183)||(43277485-43277659)
chr7 (23-183)||(3287148-3287308)
chr7 (9-172)||(18875596-18875759)
chr7 (9-122)||(46386808-46386921)
chr7 (9-122)||(20585574-20585687)
chr7 (12-122)||(37785086-37785196)
chr7 (9-122)||(12465981-12466094)
chr7 (9-118)||(44374164-44374273)
chr7 (9-118)||(44383029-44383138)
chr7 (9-122)||(19282310-19282423)
chr7 (34-122)||(11066711-11066799)
chr7 (34-122)||(12127885-12127973)
chr7 (41-122)||(32434311-32434392)
chr7 (34-122)||(13148193-13148281)
chr7 (49-183)||(14161601-14161728)
chr7 (34-144)||(12371521-12371631)
chr7 (9-147)||(15281477-15281612)
chr7 (42-145)||(11053876-11053979)
chr7 (256-319)||(18875451-18875514)
chr7 (256-319)||(12371659-12371722)
chr7 (256-319)||(13148077-13148140)
chr7 (256-319)||(13745805-13745868)
chr7 (256-319)||(44374330-44374393)
chr7 (256-319)||(44383195-44383258)
chr7 (256-319)||(3287381-3287444)
chr7 (256-319)||(11066852-11066915)
chr7 (256-319)||(12127769-12127832)
chr7 (256-319)||(12465865-12465928)
chr7 (260-319)||(25941826-25941885)
chr7 (256-319)||(46386692-46386755)
chr7 (259-319)||(24270586-24270646)
chr7 (256-319)||(13745381-13745444)
chr7 (256-319)||(14161459-14161522)
chr7 (256-319)||(15720160-15720223)
chr7 (256-319)||(19282476-19282539)
chr7 (256-319)||(33001298-33001361)
chr7 (256-319)||(43277349-43277412)
chr7 (38-150)||(3289520-3289632)
chr7 (259-319)||(4691500-4691560)
chr7 (259-319)||(48213549-48213609)
chr7 (256-319)||(14258736-14258799)
chr7 (256-319)||(14928937-14929000)
chr7 (256-319)||(15352403-15352466)
chr7 (262-319)||(13894485-13894542)
chr7 (38-113)||(8757130-8757206)
chr7 (259-319)||(15576435-15576495)
chr7 (259-319)||(20252946-20253006)
chr7 (275-319)||(39292341-39292385)
chr7 (38-113)||(40555477-40555553)
chr7 (256-319)||(8851764-8851827)
chr7 (256-319)||(16580044-16580107)
chr7 (256-319)||(16585556-16585619)
chr7 (256-319)||(20585740-20585803)
chr7 (256-319)||(20619670-20619733)
chr7 (38-112)||(21735237-21735312)
chr7 (256-319)||(32301566-32301629)
chr7 (9-140)||(33001175-33001303)
chr7 (50-113)||(4325310-4325374)
chr7 (38-113)||(13408014-13408090)
chr7 (38-113)||(13865120-13865196)
chr7 (275-319)||(21675513-21675557)
chr7 (256-319)||(16460537-16460600)
chr7 (38-113)||(832757-832833)
chr7 (38-113)||(1197937-1198013)
chr7 (256-319)||(32434194-32434258)
chr7 (275-319)||(46473490-46473534)
chr7 (140-183)||(13134091-13134134)
chr7 (256-319)||(20487827-20487890)
chr7 (50-111)||(12755442-12755504)
chr7 (38-142)||(15096392-15096495)
chr7 (38-106)||(17071030-17071099)
chr7 (275-319)||(8564195-8564239)
chr7 (50-113)||(14191823-14191887)
chr7 (275-319)||(21538793-21538836)
chr7 (267-319)||(48743698-48743750)
chr7 (38-106)||(59161-59230)
chr7 (38-142)||(15139364-15139467)
chr7 (38-142)||(19558032-19558135)
chr7 (256-288)||(1489907-1489939)
chr7 (95-147)||(4071024-4071075)
chr7 (96-139)||(11303182-11303226)
chr7 (50-97)||(11309537-11309585)
chr7 (95-139)||(16108882-16108925)
[»] chr4 (59 HSPs)
chr4 (9-172)||(19435448-19435611)
chr4 (9-163)||(37018816-37018970)
chr4 (9-118)||(16997745-16997854)
chr4 (11-122)||(42875019-42875130)
chr4 (11-122)||(14548846-14548957)
chr4 (12-122)||(25090874-25090984)
chr4 (34-121)||(19609567-19609654)
chr4 (9-122)||(10357157-10357270)
chr4 (9-122)||(11425172-11425286)
chr4 (9-100)||(33243998-33244089)
chr4 (256-319)||(19435303-19435366)
chr4 (38-150)||(4615764-4615876)
chr4 (256-319)||(11425339-11425402)
chr4 (256-319)||(16997914-16997977)
chr4 (256-319)||(53631078-53631141)
chr4 (259-319)||(26922276-26922336)
chr4 (256-319)||(10357041-10357104)
chr4 (256-319)||(14549010-14549073)
chr4 (256-319)||(14630210-14630273)
chr4 (256-319)||(15344261-15344324)
chr4 (256-319)||(37019053-37019116)
chr4 (38-150)||(27027977-27028089)
chr4 (259-319)||(35660233-35660293)
chr4 (11-142)||(3485134-3485262)
chr4 (256-319)||(13036382-13036445)
chr4 (260-319)||(14508150-14508209)
chr4 (260-319)||(19566523-19566582)
chr4 (256-319)||(25513127-25513190)
chr4 (260-319)||(26445273-26445332)
chr4 (256-319)||(42875183-42875246)
chr4 (256-319)||(55582588-55582651)
chr4 (257-319)||(25091038-25091100)
chr4 (38-150)||(2584909-2585021)
chr4 (262-319)||(3337489-3337546)
chr4 (12-144)||(21061743-21061874)
chr4 (259-319)||(45314941-45315001)
chr4 (256-319)||(19609708-19609771)
chr4 (42-150)||(6511820-6511928)
chr4 (38-150)||(14933139-14933251)
chr4 (263-323)||(15114614-15114674)
chr4 (256-324)||(33243896-33243964)
chr4 (260-319)||(2425225-2425284)
chr4 (256-319)||(3485295-3485358)
chr4 (137-183)||(9923437-9923483)
chr4 (38-150)||(14942344-14942457)
chr4 (38-150)||(13446694-13446806)
chr4 (9-113)||(15448145-15448248)
chr4 (50-150)||(20899458-20899558)
chr4 (259-319)||(16026533-16026592)
chr4 (38-112)||(18229899-18229974)
chr4 (137-183)||(11479376-11479422)
chr4 (38-106)||(9638247-9638316)
chr4 (140-183)||(14629251-14629294)
chr4 (140-183)||(35659973-35660016)
chr4 (11-86)||(19734514-19734589)
chr4 (97-139)||(49547946-49547987)
chr4 (38-106)||(9871309-9871378)
chr4 (38-106)||(51992763-51992832)
chr4 (96-139)||(15534116-15534160)
[»] chr8 (61 HSPs)
chr8 (9-183)||(22259031-22259203)
chr8 (9-118)||(20179246-20179355)
chr8 (34-122)||(19140008-19140096)
chr8 (34-122)||(39936731-39936819)
chr8 (9-147)||(17907670-17907807)
chr8 (12-122)||(42818628-42818738)
chr8 (9-147)||(17217802-17217938)
chr8 (256-319)||(5760917-5760980)
chr8 (256-319)||(20179126-20179189)
chr8 (256-319)||(20517722-20517785)
chr8 (256-319)||(22344426-22344489)
chr8 (256-319)||(22356086-22356149)
chr8 (256-319)||(36305043-36305106)
chr8 (256-319)||(39936615-39936678)
chr8 (259-319)||(4381397-4381457)
chr8 (256-319)||(19140149-19140212)
chr8 (256-319)||(22483131-22483194)
chr8 (49-147)||(23888977-23889075)
chr8 (256-318)||(6102359-6102420)
chr8 (259-317)||(22474139-22474197)
chr8 (259-319)||(18817066-18817126)
chr8 (9-147)||(23947414-23947549)
chr8 (256-317)||(20084245-20084305)
chr8 (38-146)||(22584437-22584545)
chr8 (259-319)||(18815427-18815487)
chr8 (260-319)||(17979021-17979080)
chr8 (9-147)||(22244617-22244753)
chr8 (262-319)||(361817-361874)
chr8 (266-323)||(17437919-17437976)
chr8 (11-80)||(24713388-24713457)
chr8 (259-319)||(5080396-5080456)
chr8 (259-311)||(36733126-36733178)
chr8 (256-319)||(18833855-18833918)
chr8 (256-319)||(21346004-21346067)
chr8 (9-122)||(20084358-20084467)
chr8 (262-319)||(32949991-32950048)
chr8 (275-319)||(19332179-19332223)
chr8 (275-319)||(45559773-45559817)
chr8 (256-319)||(5082817-5082880)
chr8 (260-319)||(21513709-21513768)
chr8 (256-319)||(42818512-42818575)
chr8 (50-113)||(15635914-15635978)
chr8 (275-319)||(18118769-18118813)
chr8 (275-319)||(18122344-18122388)
chr8 (38-113)||(20454481-20454557)
chr8 (275-319)||(25295536-25295580)
chr8 (275-319)||(25757556-25757600)
chr8 (140-183)||(12800500-12800543)
chr8 (38-104)||(20455238-20455305)
chr8 (38-104)||(20460216-20460283)
chr8 (256-319)||(23914308-23914371)
chr8 (140-183)||(31724302-31724345)
chr8 (136-183)||(23669745-23669794)
chr8 (38-142)||(22318662-22318765)
chr8 (38-106)||(39695271-39695340)
chr8 (38-97)||(19882207-19882267)
chr8 (275-311)||(22313234-22313270)
chr8 (57-132)||(6102463-6102536)
chr8 (38-106)||(25849189-25849258)
chr8 (293-321)||(21326541-21326569)
chr8 (275-319)||(24624072-24624116)
[»] chr3 (104 HSPs)
chr3 (30-176)||(50348773-50348919)
chr3 (23-163)||(14153150-14153290)
chr3 (9-122)||(5206375-5206488)
chr3 (9-122)||(41173092-41173205)
chr3 (9-122)||(35065301-35065414)
chr3 (11-122)||(16728503-16728614)
chr3 (14-122)||(17693291-17693399)
chr3 (23-122)||(44273706-44273805)
chr3 (14-144)||(14508074-14508204)
chr3 (12-122)||(15932228-15932338)
chr3 (9-122)||(11258685-11258798)
chr3 (9-122)||(45531342-45531455)
chr3 (11-122)||(35353819-35353930)
chr3 (34-122)||(22307304-22307392)
chr3 (11-122)||(19884244-19884355)
chr3 (9-122)||(17519594-17519707)
chr3 (9-122)||(17534456-17534569)
chr3 (34-122)||(40807239-40807327)
chr3 (30-122)||(2842183-2842275)
chr3 (34-122)||(17538350-17538438)
chr3 (256-319)||(6156090-6156153)
chr3 (256-319)||(14153004-14153067)
chr3 (256-319)||(24546221-24546284)
chr3 (256-319)||(50755986-50756049)
chr3 (9-85)||(5215083-5215159)
chr3 (256-319)||(2842067-2842130)
chr3 (256-319)||(14508232-14508295)
chr3 (256-319)||(17046546-17046609)
chr3 (256-319)||(17207726-17207789)
chr3 (256-319)||(17538491-17538554)
chr3 (256-319)||(17693452-17693515)
chr3 (256-319)||(35065185-35065248)
chr3 (256-319)||(40807380-40807443)
chr3 (256-319)||(50348631-50348694)
chr3 (256-319)||(54876088-54876151)
chr3 (256-318)||(44273858-44273920)
chr3 (256-317)||(9511772-9511833)
chr3 (256-317)||(9519747-9519808)
chr3 (256-319)||(11192465-11192528)
chr3 (256-319)||(13519667-13519729)
chr3 (256-319)||(15565898-15565961)
chr3 (256-319)||(17519478-17519541)
chr3 (256-319)||(17534340-17534403)
chr3 (9-147)||(20417293-20417429)
chr3 (256-319)||(22307188-22307251)
chr3 (256-319)||(35353983-35354046)
chr3 (256-319)||(41172976-41173039)
chr3 (259-319)||(54330910-54330970)
chr3 (256-319)||(5206259-5206322)
chr3 (256-319)||(11258851-11258914)
chr3 (256-319)||(15932112-15932175)
chr3 (256-319)||(17685448-17685511)
chr3 (9-106)||(10562921-10563019)
chr3 (54-147)||(13179399-13179492)
chr3 (256-322)||(42353276-42353341)
chr3 (38-150)||(10550510-10550622)
chr3 (266-319)||(14441562-14441615)
chr3 (50-150)||(14818278-14818378)
chr3 (54-147)||(16059489-16059580)
chr3 (38-113)||(3394736-3394812)
chr3 (256-319)||(19568973-19569037)
chr3 (259-319)||(50351605-50351665)
chr3 (256-319)||(10542063-10542126)
chr3 (260-319)||(14568664-14568723)
chr3 (256-318)||(18700079-18700141)
chr3 (54-147)||(16044629-16044720)
chr3 (38-113)||(13523145-13523221)
chr3 (51-122)||(23395786-23395857)
chr3 (256-319)||(12470186-12470249)
chr3 (256-319)||(12511232-12511295)
chr3 (256-319)||(40812217-40812280)
chr3 (256-323)||(49900112-49900179)
chr3 (256-302)||(17691427-17691473)
chr3 (256-318)||(43889405-43889467)
chr3 (9-113)||(13520515-13520618)
chr3 (38-150)||(17548249-17548361)
chr3 (38-150)||(52338663-52338775)
chr3 (54-113)||(6819367-6819427)
chr3 (50-113)||(18367492-18367556)
chr3 (139-183)||(33564372-33564416)
chr3 (256-319)||(14671208-14671271)
chr3 (256-319)||(14682707-14682770)
chr3 (51-142)||(42353374-42353463)
chr3 (38-106)||(6158637-6158706)
chr3 (278-319)||(12952448-12952489)
chr3 (38-106)||(14642293-14642362)
chr3 (62-139)||(16050114-16050189)
chr3 (38-113)||(179441-179517)
chr3 (275-319)||(25104806-25104850)
chr3 (262-317)||(43928741-43928796)
chr3 (53-150)||(52213175-52213272)
chr3 (38-106)||(14250861-14250927)
chr3 (142-183)||(16180481-16180522)
chr3 (38-106)||(37038058-37038127)
chr3 (38-106)||(42324964-42325033)
chr3 (275-319)||(17937931-17937975)
chr3 (275-319)||(18739300-18739344)
chr3 (140-183)||(11191416-11191459)
chr3 (140-183)||(11561995-11562038)
chr3 (141-183)||(14519583-14519625)
chr3 (97-139)||(54520771-54520812)
chr3 (55-100)||(13519549-13519593)
chr3 (290-319)||(14519681-14519710)
chr3 (275-319)||(4813250-4813294)
[»] chr1 (62 HSPs)
chr1 (9-140)||(19675969-19676100)
chr1 (9-122)||(42912268-42912381)
chr1 (23-122)||(16059035-16059134)
chr1 (9-122)||(4596566-4596679)
chr1 (9-122)||(20587896-20588009)
chr1 (9-122)||(20592434-20592547)
chr1 (12-122)||(21046770-21046880)
chr1 (9-122)||(20634356-20634469)
chr1 (37-163)||(1642681-1642805)
chr1 (34-122)||(41227425-41227513)
chr1 (9-147)||(42696935-42697070)
chr1 (256-319)||(20588063-20588126)
chr1 (256-319)||(20592601-20592664)
chr1 (256-319)||(20634240-20634303)
chr1 (256-319)||(39060480-39060543)
chr1 (256-317)||(4596452-4596513)
chr1 (38-150)||(18275157-18275269)
chr1 (38-150)||(52983387-52983499)
chr1 (259-319)||(41226056-41226116)
chr1 (259-319)||(41227309-41227369)
chr1 (259-319)||(50544239-50544299)
chr1 (256-319)||(1642980-1643043)
chr1 (256-319)||(7052661-7052723)
chr1 (256-319)||(22824011-22824074)
chr1 (38-147)||(51476218-51476327)
chr1 (262-319)||(12710278-12710335)
chr1 (256-319)||(16058919-16058982)
chr1 (260-319)||(18120993-18121052)
chr1 (256-319)||(19676095-19676158)
chr1 (256-319)||(38887693-38887755)
chr1 (256-319)||(51082600-51082663)
chr1 (256-319)||(51323659-51323722)
chr1 (256-318)||(45496329-45496391)
chr1 (256-319)||(14238217-14238280)
chr1 (256-319)||(21239900-21239963)
chr1 (260-319)||(24720298-24720357)
chr1 (256-319)||(42912434-42912497)
chr1 (257-319)||(21046654-21046716)
chr1 (259-323)||(6833602-6833666)
chr1 (11-142)||(14238313-14238441)
chr1 (256-319)||(48301316-48301379)
chr1 (53-150)||(18270518-18270615)
chr1 (264-318)||(28477374-28477428)
chr1 (41-142)||(7052756-7052855)
chr1 (38-150)||(13528492-13528604)
chr1 (41-122)||(38887848-38887927)
chr1 (38-113)||(7792586-7792662)
chr1 (256-308)||(11809199-11809251)
chr1 (50-113)||(44822855-44822919)
chr1 (50-150)||(18823860-18823960)
chr1 (38-106)||(38057394-38057463)
chr1 (38-105)||(21181067-21181135)
chr1 (256-308)||(23073270-23073322)
chr1 (50-113)||(24815586-24815647)
chr1 (54-142)||(13302045-13302132)
chr1 (38-106)||(19761968-19762037)
chr1 (38-97)||(10813273-10813333)
chr1 (141-183)||(17903779-17903821)
chr1 (38-106)||(8276733-8276802)
chr1 (290-319)||(17902366-17902395)
chr1 (69-142)||(51082496-51082567)
chr1 (155-183)||(14793947-14793975)
[»] chr6 (52 HSPs)
chr6 (9-119)||(17318846-17318956)
chr6 (9-122)||(15891424-15891537)
chr6 (11-122)||(27126198-27126309)
chr6 (9-122)||(31733926-31734039)
chr6 (34-122)||(23150987-23151075)
chr6 (34-122)||(18708743-18708830)
chr6 (39-147)||(31735624-31735732)
chr6 (9-122)||(24441140-24441251)
chr6 (256-319)||(7827356-7827419)
chr6 (256-319)||(17318727-17318790)
chr6 (256-319)||(23150871-23150934)
chr6 (257-319)||(13285094-13285156)
chr6 (53-122)||(7827234-7827303)
chr6 (256-319)||(19655834-19655897)
chr6 (256-319)||(22556633-22556696)
chr6 (256-319)||(27126082-27126145)
chr6 (53-145)||(22212211-22212303)
chr6 (258-319)||(31734094-31734155)
chr6 (259-319)||(19234584-19234644)
chr6 (259-319)||(25921117-25921177)
chr6 (257-317)||(32259233-32259293)
chr6 (256-319)||(18708883-18708946)
chr6 (256-319)||(23491776-23491839)
chr6 (256-319)||(23497374-23497437)
chr6 (256-319)||(27318160-27318223)
chr6 (34-89)||(27322172-27322227)
chr6 (256-319)||(28947728-28947791)
chr6 (260-319)||(29044650-29044709)
chr6 (9-150)||(13751052-13751191)
chr6 (256-318)||(18702948-18703010)
chr6 (259-319)||(18585007-18585067)
chr6 (38-113)||(18658448-18658524)
chr6 (38-150)||(19443980-19444092)
chr6 (38-113)||(610982-611058)
chr6 (38-113)||(29848239-29848315)
chr6 (256-319)||(15705216-15705279)
chr6 (256-319)||(19773314-19773377)
chr6 (260-318)||(18455677-18455734)
chr6 (38-150)||(16133370-16133482)
chr6 (260-302)||(15891327-15891369)
chr6 (278-319)||(18398325-18398366)
chr6 (38-113)||(13764592-13764668)
chr6 (137-183)||(18927964-18928010)
chr6 (136-183)||(20411462-20411511)
chr6 (256-310)||(22806217-22806271)
chr6 (84-122)||(27318276-27318314)
chr6 (9-58)||(7825864-7825913)
chr6 (38-106)||(19829695-19829764)
chr6 (275-319)||(22523573-22523617)
chr6 (50-150)||(24267019-24267119)
chr6 (286-319)||(25601882-25601915)
chr6 (151-183)||(18458574-18458606)
[»] chr2 (52 HSPs)
chr2 (9-144)||(36839392-36839527)
chr2 (9-122)||(28653223-28653336)
chr2 (9-122)||(9975146-9975259)
chr2 (30-122)||(27485191-27485283)
chr2 (9-122)||(17306705-17306818)
chr2 (9-122)||(23969344-23969457)
chr2 (9-122)||(24515404-24515517)
chr2 (12-122)||(19358152-19358262)
chr2 (34-122)||(24781561-24781649)
chr2 (51-122)||(5031851-5031922)
chr2 (46-147)||(5985336-5985435)
chr2 (256-319)||(9975313-9975376)
chr2 (256-319)||(22686224-22686287)
chr2 (256-319)||(36839555-36839618)
chr2 (41-146)||(14693456-14693561)
chr2 (256-319)||(5031735-5031798)
chr2 (256-319)||(24781445-24781508)
chr2 (256-319)||(25587291-25587354)
chr2 (256-319)||(43707889-43707952)
chr2 (9-147)||(10897487-10897625)
chr2 (256-319)||(23969228-23969291)
chr2 (256-319)||(24515570-24515633)
chr2 (259-319)||(1384290-1384350)
chr2 (54-141)||(27851836-27851922)
chr2 (256-319)||(17306871-17306934)
chr2 (256-319)||(19201806-19201869)
chr2 (260-319)||(21316266-21316325)
chr2 (260-319)||(21336057-21336116)
chr2 (256-319)||(23069055-23069118)
chr2 (260-319)||(23609865-23609924)
chr2 (256-319)||(27485075-27485138)
chr2 (256-319)||(28345680-28345743)
chr2 (256-319)||(28653107-28653170)
chr2 (262-319)||(24273864-24273921)
chr2 (256-319)||(21368491-21368554)
chr2 (54-147)||(27860542-27860634)
chr2 (38-147)||(44071733-44071841)
chr2 (50-113)||(31520371-31520435)
chr2 (54-140)||(18391038-18391124)
chr2 (38-113)||(6478034-6478110)
chr2 (275-315)||(22332121-22332161)
chr2 (256-319)||(9784966-9785029)
chr2 (131-183)||(20915375-20915429)
chr2 (275-318)||(24841356-24841399)
chr2 (274-319)||(29113764-29113809)
chr2 (140-183)||(25140214-25140257)
chr2 (136-183)||(22689956-22690005)
chr2 (136-183)||(22694552-22694601)
chr2 (38-142)||(3538981-3539084)
chr2 (38-106)||(18389040-18389109)
chr2 (143-183)||(10744423-10744463)
chr2 (96-139)||(20261154-20261198)
[»] scaffold0737 (2 HSPs)
scaffold0737 (9-122)||(5434-5547)
scaffold0737 (256-319)||(5318-5381)
[»] scaffold0064 (2 HSPs)
scaffold0064 (12-122)||(57969-58079)
scaffold0064 (256-319)||(58132-58195)
[»] scaffold1662 (2 HSPs)
scaffold1662 (9-122)||(142-255)
scaffold1662 (256-319)||(26-89)
[»] scaffold1817 (2 HSPs)
scaffold1817 (12-122)||(118-228)
scaffold1817 (258-319)||(2-63)
[»] scaffold0111 (4 HSPs)
scaffold0111 (9-122)||(13255-13368)
scaffold0111 (9-122)||(19522-19635)
scaffold0111 (256-319)||(13141-13204)
scaffold0111 (256-319)||(19408-19471)
[»] scaffold0042 (2 HSPs)
scaffold0042 (12-122)||(47290-47399)
scaffold0042 (49-147)||(28532-28628)
[»] scaffold0509 (2 HSPs)
scaffold0509 (34-144)||(9457-9567)
scaffold0509 (256-288)||(9397-9429)
[»] chr5 (30 HSPs)
chr5 (9-122)||(19920852-19920965)
chr5 (37-163)||(23200244-23200368)
chr5 (256-319)||(30611937-30612000)
chr5 (260-319)||(16605208-16605267)
chr5 (256-319)||(19921018-19921081)
chr5 (256-319)||(30613897-30613960)
chr5 (256-316)||(20198196-20198256)
chr5 (259-319)||(22110987-22111047)
chr5 (260-319)||(18744038-18744097)
chr5 (256-319)||(20565938-20566001)
chr5 (256-315)||(23199998-23200057)
chr5 (256-319)||(32607930-32607992)
chr5 (256-319)||(36509382-36509444)
chr5 (263-319)||(1627985-1628041)
chr5 (38-113)||(24277340-24277416)
chr5 (38-113)||(24384797-24384873)
chr5 (260-319)||(14026412-14026471)
chr5 (256-319)||(21399608-21399671)
chr5 (256-319)||(33895487-33895550)
chr5 (12-106)||(25250632-25250725)
chr5 (12-106)||(25314417-25314510)
chr5 (9-101)||(21406431-21406521)
chr5 (59-150)||(22357656-22357747)
chr5 (38-150)||(8952750-8952860)
chr5 (89-147)||(20469827-20469884)
chr5 (41-123)||(32608084-32608164)
chr5 (38-113)||(17812638-17812714)
chr5 (38-106)||(10953214-10953283)
chr5 (290-319)||(16062904-16062933)
chr5 (95-139)||(37805118-37805163)
[»] scaffold0134 (2 HSPs)
scaffold0134 (34-122)||(9947-10035)
scaffold0134 (256-319)||(9831-9894)
[»] scaffold0632 (2 HSPs)
scaffold0632 (12-122)||(386-496)
scaffold0632 (256-319)||(549-612)
[»] scaffold0375 (2 HSPs)
scaffold0375 (40-122)||(9024-9106)
scaffold0375 (257-319)||(8908-8970)
[»] scaffold0384 (2 HSPs)
scaffold0384 (34-122)||(8106-8195)
scaffold0384 (256-319)||(7990-8053)
[»] scaffold0181 (1 HSPs)
scaffold0181 (38-150)||(34089-34201)
[»] scaffold0146 (3 HSPs)
scaffold0146 (13-106)||(23618-23711)
scaffold0146 (256-319)||(22442-22505)
scaffold0146 (53-142)||(22322-22409)
[»] scaffold1283 (1 HSPs)
scaffold1283 (256-319)||(1072-1135)
[»] scaffold0098 (1 HSPs)
scaffold0098 (256-319)||(39483-39546)
[»] scaffold0074 (1 HSPs)
scaffold0074 (37-163)||(773-892)
[»] scaffold0061 (2 HSPs)
scaffold0061 (256-319)||(15191-15254)
scaffold0061 (256-319)||(24249-24312)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-147)||(127119-127254)
[»] scaffold0273 (1 HSPs)
scaffold0273 (38-150)||(6862-6974)
[»] scaffold0032 (2 HSPs)
scaffold0032 (256-313)||(62581-62638)
scaffold0032 (275-319)||(117010-117054)
[»] scaffold0004 (3 HSPs)
scaffold0004 (256-317)||(66639-66700)
scaffold0004 (38-150)||(59585-59697)
scaffold0004 (89-147)||(109458-109515)
[»] scaffold0123 (2 HSPs)
scaffold0123 (259-319)||(16325-16385)
scaffold0123 (38-112)||(2013-2088)
[»] scaffold1633 (2 HSPs)
scaffold1633 (256-319)||(589-652)
scaffold1633 (49-144)||(468-561)
[»] scaffold1186 (2 HSPs)
scaffold1186 (256-319)||(1095-1158)
scaffold1186 (140-183)||(100-143)
[»] scaffold0086 (1 HSPs)
scaffold0086 (256-319)||(36121-36184)
[»] scaffold0005 (2 HSPs)
scaffold0005 (256-319)||(187110-187173)
scaffold0005 (140-183)||(188089-188132)
[»] scaffold0369 (1 HSPs)
scaffold0369 (256-310)||(16584-16638)
[»] scaffold0414 (1 HSPs)
scaffold0414 (256-317)||(11953-12014)
[»] scaffold0529 (1 HSPs)
scaffold0529 (259-319)||(7904-7964)
[»] scaffold0409 (2 HSPs)
scaffold0409 (12-147)||(444-578)
scaffold0409 (12-147)||(8699-8833)
[»] scaffold0241 (2 HSPs)
scaffold0241 (259-319)||(5104-5164)
scaffold0241 (259-318)||(1951-2010)
[»] scaffold0108 (2 HSPs)
scaffold0108 (259-319)||(7386-7446)
scaffold0108 (38-106)||(5657-5726)
[»] scaffold0439 (4 HSPs)
scaffold0439 (256-319)||(3803-3866)
scaffold0439 (259-319)||(11547-11606)
scaffold0439 (9-122)||(11381-11491)
scaffold0439 (49-140)||(3718-3808)
[»] scaffold0379 (1 HSPs)
scaffold0379 (256-319)||(10095-10158)
[»] scaffold0256 (1 HSPs)
scaffold0256 (264-319)||(3126-3181)
[»] scaffold0203 (1 HSPs)
scaffold0203 (256-315)||(18735-18794)
[»] scaffold0125 (1 HSPs)
scaffold0125 (256-319)||(27684-27747)
[»] scaffold0104 (2 HSPs)
scaffold0104 (256-319)||(7604-7666)
scaffold0104 (256-319)||(14235-14297)
[»] scaffold0026 (2 HSPs)
scaffold0026 (256-319)||(146117-146179)
scaffold0026 (43-142)||(145987-146084)
[»] scaffold0019 (1 HSPs)
scaffold0019 (256-319)||(29542-29605)
[»] scaffold2046 (1 HSPs)
scaffold2046 (9-150)||(325-464)
[»] scaffold0453 (1 HSPs)
scaffold0453 (9-150)||(3250-3389)
[»] scaffold0413 (1 HSPs)
scaffold0413 (9-150)||(10891-11030)
[»] scaffold0309 (2 HSPs)
scaffold0309 (9-150)||(6121-6260)
scaffold0309 (9-150)||(8273-8412)
[»] scaffold0002 (1 HSPs)
scaffold0002 (54-147)||(127496-127589)
[»] scaffold0334 (1 HSPs)
scaffold0334 (262-319)||(1475-1532)
[»] scaffold0230 (1 HSPs)
scaffold0230 (259-319)||(7458-7518)
[»] scaffold0113 (1 HSPs)
scaffold0113 (259-319)||(34652-34712)
[»] scaffold1539 (1 HSPs)
scaffold1539 (256-319)||(1291-1354)
[»] scaffold0546 (4 HSPs)
scaffold0546 (256-319)||(11179-11242)
scaffold0546 (11-142)||(7198-7326)
scaffold0546 (256-319)||(7359-7422)
scaffold0546 (41-142)||(11047-11146)
[»] scaffold0452 (1 HSPs)
scaffold0452 (256-319)||(13270-13333)
[»] scaffold0292 (1 HSPs)
scaffold0292 (256-319)||(6897-6960)
[»] scaffold0205 (1 HSPs)
scaffold0205 (256-319)||(29996-30059)
[»] scaffold0109 (4 HSPs)
scaffold0109 (256-319)||(582-645)
scaffold0109 (256-319)||(5885-5948)
scaffold0109 (11-142)||(5981-6109)
scaffold0109 (41-142)||(678-777)
[»] scaffold0083 (4 HSPs)
scaffold0083 (9-140)||(645-773)
scaffold0083 (9-140)||(5949-6077)
scaffold0083 (256-319)||(587-650)
scaffold0083 (256-319)||(5891-5954)
[»] scaffold0077 (2 HSPs)
scaffold0077 (11-142)||(33573-33701)
scaffold0077 (256-298)||(33734-33776)
[»] scaffold0047 (2 HSPs)
scaffold0047 (256-315)||(78449-78507)
scaffold0047 (49-142)||(78322-78413)
[»] scaffold0039 (2 HSPs)
scaffold0039 (256-319)||(10535-10597)
scaffold0039 (9-61)||(10695-10746)
[»] scaffold0034 (1 HSPs)
scaffold0034 (256-319)||(120294-120357)
[»] scaffold0021 (1 HSPs)
scaffold0021 (256-319)||(168821-168884)
[»] scaffold0020 (1 HSPs)
scaffold0020 (256-319)||(142997-143060)
[»] scaffold0017 (1 HSPs)
scaffold0017 (256-319)||(25900-25963)
[»] scaffold0490 (1 HSPs)
scaffold0490 (9-114)||(5039-5143)
[»] scaffold0056 (1 HSPs)
scaffold0056 (38-147)||(66253-66361)
[»] scaffold0188 (1 HSPs)
scaffold0188 (38-150)||(335-447)
[»] scaffold0180 (1 HSPs)
scaffold0180 (262-319)||(28973-29030)
[»] scaffold0151 (1 HSPs)
scaffold0151 (262-319)||(9445-9502)
[»] scaffold0117 (1 HSPs)
scaffold0117 (50-150)||(40923-41023)
[»] scaffold0106 (1 HSPs)
scaffold0106 (262-319)||(21123-21180)
[»] scaffold0213 (1 HSPs)
scaffold0213 (259-319)||(18552-18612)
[»] scaffold0070 (1 HSPs)
scaffold0070 (50-113)||(8311-8375)
[»] scaffold0207 (1 HSPs)
scaffold0207 (11-142)||(15210-15338)
[»] scaffold0096 (1 HSPs)
scaffold0096 (256-319)||(21452-21515)
[»] scaffold0018 (1 HSPs)
scaffold0018 (256-319)||(21036-21099)
[»] scaffold0364 (1 HSPs)
scaffold0364 (262-312)||(7523-7573)
[»] scaffold1815 (1 HSPs)
scaffold1815 (41-101)||(1268-1327)
[»] scaffold0825 (1 HSPs)
scaffold0825 (50-113)||(1549-1613)
[»] scaffold0607 (1 HSPs)
scaffold0607 (50-113)||(2960-3024)
[»] scaffold0429 (1 HSPs)
scaffold0429 (38-113)||(2724-2800)
[»] scaffold0126 (1 HSPs)
scaffold0126 (50-113)||(6053-6117)
[»] scaffold0639 (1 HSPs)
scaffold0639 (256-319)||(7194-7257)
[»] scaffold0575 (1 HSPs)
scaffold0575 (256-319)||(5931-5994)
[»] scaffold0507 (1 HSPs)
scaffold0507 (256-319)||(2439-2502)
[»] scaffold0445 (1 HSPs)
scaffold0445 (54-147)||(2633-2727)
[»] scaffold0335 (1 HSPs)
scaffold0335 (137-183)||(945-991)
[»] scaffold0630 (1 HSPs)
scaffold0630 (38-106)||(8304-8373)
[»] scaffold0149 (1 HSPs)
scaffold0149 (38-106)||(20889-20958)
[»] scaffold0107 (1 HSPs)
scaffold0107 (38-150)||(3120-3232)
[»] scaffold0059 (1 HSPs)
scaffold0059 (259-300)||(49243-49284)
[»] scaffold0011 (2 HSPs)
scaffold0011 (140-181)||(40231-40272)
scaffold0011 (264-319)||(126140-126195)
[»] scaffold0962 (1 HSPs)
scaffold0962 (37-104)||(1272-1340)
[»] scaffold0261 (1 HSPs)
scaffold0261 (256-316)||(7115-7175)
[»] scaffold0065 (1 HSPs)
scaffold0065 (38-106)||(53378-53446)
[»] scaffold0232 (1 HSPs)
scaffold0232 (256-319)||(3654-3717)
[»] scaffold0220 (2 HSPs)
scaffold0220 (38-104)||(16004-16071)
scaffold0220 (38-104)||(13186-13253)
[»] scaffold0008 (2 HSPs)
scaffold0008 (49-147)||(136319-136416)
scaffold0008 (38-113)||(12244-12320)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-147)||(95542-95636)
[»] scaffold0013 (1 HSPs)
scaffold0013 (275-317)||(7953-7995)
[»] scaffold0328 (1 HSPs)
scaffold0328 (38-106)||(19387-19456)
[»] scaffold1278 (1 HSPs)
scaffold1278 (275-319)||(857-901)
[»] scaffold1223 (1 HSPs)
scaffold1223 (143-183)||(672-712)
[»] scaffold0174 (1 HSPs)
scaffold0174 (275-315)||(20683-20723)
[»] scaffold0080 (1 HSPs)
scaffold0080 (283-319)||(22396-22432)
[»] scaffold0054 (1 HSPs)
scaffold0054 (143-183)||(66442-66482)
[»] scaffold0645 (1 HSPs)
scaffold0645 (140-183)||(657-700)
[»] scaffold0028 (1 HSPs)
scaffold0028 (38-144)||(3793-3898)
[»] scaffold0628 (2 HSPs)
scaffold0628 (141-183)||(4304-4346)
scaffold0628 (141-183)||(8864-8906)
[»] scaffold0371 (1 HSPs)
scaffold0371 (38-147)||(16846-16954)
[»] scaffold0231 (1 HSPs)
scaffold0231 (141-183)||(18523-18565)
[»] scaffold0162 (1 HSPs)
scaffold0162 (136-183)||(24797-24846)
[»] scaffold1695 (1 HSPs)
scaffold1695 (59-142)||(625-707)
[»] scaffold0338 (1 HSPs)
scaffold0338 (38-113)||(3679-3755)
[»] scaffold0178 (1 HSPs)
scaffold0178 (155-183)||(570-598)
[»] scaffold0177 (1 HSPs)
scaffold0177 (24-60)||(1713-1749)
[»] scaffold0090 (1 HSPs)
scaffold0090 (275-319)||(35542-35586)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 43277659 - 43277485
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43277659 agcagagacagtaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 43277560  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43277559 cataaatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcatagttatcaaca 43277485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 3287148 - 3287308
Alignment:
Q  23 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3287148 catacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 3287247  T
Q  123 tttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3287248 tttcacattaagcaacaacattaatcattaataacatcatataaaatcatagttatcaaca 3287308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 18875759 - 18875596
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  18875759 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattgtataacaacattattttctatatcataccttttcca 18875660  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18875659 cataaatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcat 18875596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 46386921 - 46386808
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46386921 agcagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 46386822  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  46386821 cataaatatatgta 46386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 20585574 - 20585687
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20585574 agcagagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttcca 20585673  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  20585674 cataaatatatgta 20585687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 37785196 - 37785086
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37785196 agagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 37785097  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  37785096 aaatatatgta 37785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 12466094 - 12465981
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12466094 agcagagacagcaacatacaacaacttaacaacataacatcattaataataacaacttgaatggtataacaacattatttactatatcatacattttcca 12465995  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  12465994 cataaatatatgta 12465981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 44374164 - 44374273
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44374164 agcaaagacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttcca 44374263  T
Q  109 cataaatata 118  Q
    ||||||||||    
T  44374264 cataaatata 44374273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 44383029 - 44383138
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44383029 agcaaagacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttcca 44383128  T
Q  109 cataaatata 118  Q
    ||||||||||    
T  44383129 cataaatata 44383138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 19282310 - 19282423
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  19282310 agcagagacaacaacatacaacaacttcacaacatagcatcgttaataataacaacttgaatggtataacaacattattttctatattatatcttttcca 19282409  T
Q  109 cataaatatatgta 122  Q
     |||||||||||||    
T  19282410 tataaatatatgta 19282423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 11066711 - 11066799
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11066711 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttccatatcatacattttccacataaatatatgta 11066799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 12127973 - 12127885
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12127973 ttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 12127885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 32434392 - 32434311
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32434392 cataacatcattaataacaacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 32434311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 13148281 - 13148193
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||||||||    
T  13148281 ttcacaacatagcatcattaataataacaacttgaatggtataaaaatattattttctatatcataccttttccgcataaatatatgta 13148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 14161728 - 14161601
Alignment:
Q  49 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    ||||||||| |||| |||| ||| |||||||||||||||||||||| |      ||| ||||||| ||||| |||||||||||||||||||||||||||     
T  14161728 cattaataacaacatcttggatgatataacaacattattttctatacc------ttttcacataa-tatatatatttcacattaaccaacaacattaatc 14161636  T
Q  149 attaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||||||||||||||||||||||||||    
T  14161635 attaataacatcatataacatcatagttatcaaca 14161601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 12371521 - 12371631
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaa 133  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||| ||  ||| ||||     
T  12371521 ttcacaacatagcatcattaataataacaacttgaatggtataaaaactttattttctatatcatactttttccacgtaaatatatataactcaaattat 12371620  T
Q  134 ccaacaacatt 144  Q
     ||||||||||    
T  12371621 tcaacaacatt 12371631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 15281477 - 15281612
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||  | ||||||  |||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  15281477 agcagagacaacaccattaaacaacttg-caacatagcaacatta-taataacaacttggatgatataacaacattattttctatatcatacactttcca 15281574  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||| |||||||||| |||| | |||||||||||||||||    
T  15281575 cat-aatatatgtaattcaaaataaccaacaacattaat 15281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 11053876 - 11053979
Alignment:
Q  42 atagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    |||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||    
T  11053876 atagcaacattaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagctcaaattaaccaacaa 11053974  T
Q  141 catta 145  Q
    |||||    
T  11053975 catta 11053979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 18875514 - 18875451
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18875514 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 18875451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 12371659 - 12371722
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12371659 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 12371722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13148140 - 13148077
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13148140 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 13148077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13745868 - 13745805
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13745868 caacaaagatattcacgtgaaaccaagttagatccatcacaacataggttaaatactcttaaac 13745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 44374330 - 44374393
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44374330 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 44374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 44383195 - 44383258
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44383195 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 44383258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 3287381 - 3287444
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3287381 caacaaagatattcacgtcaaaccaagttagatccatcacaacatacgttaaatattcttaaac 3287444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 11066852 - 11066915
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11066852 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactcttaaac 11066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 12127832 - 12127769
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12127832 caacaaagatattcacgtcaaaccaaattagatccatcacaacatacgttaaatactcttaaac 12127769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 12465928 - 12465865
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12465928 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactcttaaac 12465865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 25941826 - 25941885
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25941826 aaagatattcacgtcaaaccaagttagttccatcacaacataggttaaatactcttaaac 25941885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 46386755 - 46386692
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  46386755 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactcttaaac 46386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 24270646 - 24270586
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  24270646 caaagatattcacgtcaaaccaagttaaattcatcacaacataggttaaatactcttaaac 24270586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13745444 - 13745381
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  13745444 caacaaagatattcacatcaaaccaagttagattcatcacaacataggttaaatactctgaaac 13745381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 14161522 - 14161459
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  14161522 caacaaagatattcacgtcaaaccaagtaagatccatcaaaacataggttaaataatcttaaac 14161459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 15720160 - 15720223
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15720160 caacaaagatattcacatcaaaccaaattagatccatcacaacataagttaaatactcttaaac 15720223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 19282476 - 19282539
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  19282476 caacaaagatattcacgtcaaatcaaattagatccattacaacataggttaaatactcttaaac 19282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 33001298 - 33001361
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  33001298 caacaaagatattcacgtcaaaccaaattaggtccatcacaacataggttaaattctcttaaac 33001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 43277412 - 43277349
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  43277412 caacaaagatattcacgctaaaccaagttagatccatcacaacatatgttaaatactcttaaac 43277349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 3289632 - 3289520
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| | | ||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  3289632 caacatagcaacgtcaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 3289534  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  3289533 acaacatcaattat 3289520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 4691560 - 4691500
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  4691560 caaagatattcacgtcaaacctagttagattcatcacaacattggttaaatactcttaaac 4691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 48213609 - 48213549
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  48213609 caaagatattcgcgtcaaaccaagttagattcatcacaacataggttaaatattcttaaac 48213549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14258736 - 14258799
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  14258736 caacaaagatattcacgtccaaccaaattagatccatcacaacaaatgttaaatactcttaaac 14258799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 14929000 - 14928937
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||    
T  14929000 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatacttttaaac 14928937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 15352466 - 15352403
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||    
T  15352466 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatacttttaaac 15352403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 13894485 - 13894542
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  13894485 agatattcacgtcaagccaaattagattcatcacaacataggttaaatactcttaaac 13894542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 8757206 - 8757130
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| |||||||    
T  8757206 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacatttttcacataa 8757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 15576495 - 15576435
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||    
T  15576495 caaagatattcacgtcaaaccaagttagattaatcacaacataagttaaatacccttaaac 15576435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 20253006 - 20252946
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  20253006 caaagatatttatgtcaaaccaagatagattcatcacaacataggttaaatactcttaaac 20252946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 39292385 - 39292341
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39292385 aaaccaagttagatccatcacaacataggttaaatactcttaaac 39292341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 40555553 - 40555477
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||| ||||    
T  40555553 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccatataa 40555477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 8851827 - 8851764
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  8851827 caacaacgatattcacatcaaaccaaattagatccatcaccacataggttaaataatcttaaac 8851764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 16580044 - 16580107
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||| ||||||    
T  16580044 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactgttaaac 16580107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 16585619 - 16585556
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||| ||||||    
T  16585619 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactgttaaac 16585556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20585740 - 20585803
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| || ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  20585740 caacaaaaatgttcacatcaaaccaaattagatccatcacaacataagttaaatactcttaaac 20585803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20619670 - 20619733
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  20619670 caacaaggatattcacatcaaaccaaattagatccatcaccacgtaggttaaatactcttaaac 20619733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 21735312 - 21735237
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 112  Q
    ||||||||||  |||||||||||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  21735312 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 21735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 32301566 - 32301629
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  32301566 caacaaatatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 32301629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 33001175 - 33001303
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||| | ||||||  |||||||||| | ||||||| || |||||| ||| || |||||||| ||||||||||||||||||||| ||    
T  33001175 agcagagacagcaacataaaacaacttg-caacatagcaacgttaataacaataacttggatgatacaacaacataattttctatatcatacatttt-ca 33001272  T
Q  109 cataaatatatgtatttcacattaaccaacaa 140  Q
    ||| ||||||||||| ||| |||| |||||||    
T  33001273 cat-aatatatgtatctcaaattatccaacaa 33001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 4325310 - 4325374
Alignment:
Q  50 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||||||||||| ||||||    
T  4325310 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttcaacataa 4325374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 13408014 - 13408090
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggt-ataacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| | || |||||  |||||||||||||||||||||||| |||||    
T  13408014 caacatagcaatattaataataacaacttgaatgataattacaacgatattttctatatcatacattttcctcataa 13408090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 13865196 - 13865120
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  ||||||||||||||||| |||| || |||||||  |||||||||||||||||||||||| |||||    
T  13865196 caacatagcaatattaataataacaacttcaatgataataacaacgatattttctatatcatacattttcctcataa 13865120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 21675557 - 21675513
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  21675557 aaacaaagttagatccatcacaacataggttaaatactcttaaac 21675513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 16460600 - 16460537
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||| | ||||||    
T  16460600 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaataatattaaac 16460537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 832833 - 832757
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| || |||  |||||||| ||||||||||||||| |||||    
T  832833 caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctcataa 832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 1198013 - 1197937
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| || |||  |||||||| ||||||||||||||| |||||    
T  1198013 caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctcataa 1197937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 32434258 - 32434194
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatcc-atcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||||||||||||||| ||||||||  ||| ||||||| ||||||||||||||||    
T  32434258 caacaaatatattcacgtcaaaccaaattagatcctttcataacatagattaaatactcttaaac 32434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 46473490 - 46473534
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  46473490 aaaccaagttagatccattaaaacataggttaaatactcttaaac 46473534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 13134134 - 13134091
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  13134134 acattaatcattaataacatcacataacatcatagttatcaaca 13134091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20487827 - 20487890
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  | ||| ||||||||||||||||| | |||||||||| ||||||    
T  20487827 caacaaagatattcacgtccgagcaaattagatccatcacaacacatgttaaatactgttaaac 20487890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 12755504 - 12755442
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacat 111  Q
    |||||| ||||||||||||||  ||||| ||||  ||||||||||||||||||||||||||||    
T  12755504 attaatcataacaacttgaattatataaacaacgatattttctatatcatacattttccacat 12755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 15096495 - 15096392
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  15096495 caacataacaacattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 15096398  T
Q  137 acaaca 142  Q
    ||||||    
T  15096397 acaaca 15096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 17071099 - 17071030
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  17071099 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttttatatcatacattttc 17071030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 8564239 - 8564195
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||    
T  8564239 aaacaaagttaaatccattacaacataggttaaatactcttaaac 8564195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 14191887 - 14191823
Alignment:
Q  50 attaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  14191887 attaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 14191823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 21538836 - 21538793
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||    
T  21538836 aaaccaagt-agatctatcacaacataggttaaatactcttaaac 21538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 48743698 - 48743750
Alignment:
Q  267 ttcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||||| ||||| |||||| ||||||||||| |||||    
T  48743698 ttcacgtcaaaccaacttagattcatcagaacatatgttaaatactcctaaac 48743750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 59230 - 59161
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||| || |||| ||||| ||| | || ||||||||||||||||||||    
T  59230 caacatagcaacatcaataataacaatttaaatgatataaacaataataatttctatatcatacattttc 59161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 15139364 - 15139467
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || |||||| | ||||||||||| || ||||| ||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  15139364 caacataacaacattaacactaacaacttgattgatataaacaacaatattt-ctatatcatacaatgttcacataa-tatatgtatctcaaattatcca 15139461  T
Q  137 acaaca 142  Q
    ||||||    
T  15139462 acaaca 15139467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 19558135 - 19558032
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || ||| ||||| ||||||||||||| ||| ||||||  ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  19558135 caacataacaacatcaataacaacaacttgaatgatatgaacaactatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 19558038  T
Q  137 acaaca 142  Q
    ||||||    
T  19558037 acaaca 19558032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 1489939 - 1489907
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagat 288  Q
    |||||||||||||||||||||||||| ||||||    
T  1489939 caacaaagatattcacgtcaaaccaaattagat 1489907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 4071024 - 4071075
Alignment:
Q  95 tcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||| ||||| ||||| ||||||||| ||| |||||||||||||||||||    
T  4071024 tcatacaatttcctcataa-tatatgtatctcaaattaaccaacaacattaat 4071075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 11303182 - 11303226
Alignment:
Q  96 catacattttccacataa-atatatgtatttcacattaaccaaca 139  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  11303182 catatattttccacataatatatatatatttcacattaaccaaca 11303226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 11309537 - 11309585
Alignment:
Q  50 attaataataacaacttgaatggtat-aacaacattattttctatatca 97  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  11309537 attaataataacaacttgaataatataaacaacaatattttctatatca 11309585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 16108925 - 16108882
Alignment:
Q  95 tcatacattttccacataaatatatgtatttcacattaaccaaca 139  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  16108925 tcatatattttccacataa-tatatatatttcacattaaccaaca 16108882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 19435611 - 19435448
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  19435611 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattgttttctatatcataccttttcca 19435512  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19435511 cataaatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcat 19435448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 37018816 - 37018970
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37018816 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttcca 37018915  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaattattaataacatcata 163  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37018916 cataaatatatgtatttcacattaaccaacaacattaatcattaataacatcata 37018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 16997745 - 16997854
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16997745 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 16997844  T
Q  109 cataaatata 118  Q
    ||||||||||    
T  16997845 cataaatata 16997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 42875019 - 42875130
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42875019 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatactttttccaca 42875118  T
Q  111 taaatatatgta 122  Q
    ||||||||||||    
T  42875119 taaatatatgta 42875130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 14548846 - 14548957
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14548846 cagagacagcaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 14548945  T
Q  111 taaatatatgta 122  Q
    || |||||||||    
T  14548946 tacatatatgta 14548957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 25090874 - 25090984
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    ||||| |||| || ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25090874 agagaaaacaacacacaacaacttcacaacataacatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacat 25090973  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  25090974 aaatatatgta 25090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 19609567 - 19609654
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgt 121  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19609567 ttcacaacatagcatcattaataataacaacttgaatggtttaacaacattattttctatatcatacattttccacataaatatatgt 19609654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 10357270 - 10357157
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  10357270 agcaaagacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttcta 10357171  T
Q  109 cataaatatatgta 122  Q
    | ||||||||||||    
T  10357170 cgtaaatatatgta 10357157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 11425172 - 11425286
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacatta-ttttctatatcatacattttcc 107  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| | ||||    
T  11425172 agcagagacaacaacatacatcaacttcacaacatagcatcattaataataacaacatgaatgatataacaatattatttttctatatcatacctattcc 11425271  T
Q  108 acataaatatatgta 122  Q
    |||||||||||||||    
T  11425272 acataaatatatgta 11425286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 33244089 - 33243998
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatac 100  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33244089 agcagagacatcaacatacaataacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatac 33243998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19435366 - 19435303
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19435366 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 19435303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 4615876 - 4615764
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  4615876 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatgtaactcaaattaacca 4615778  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  4615777 acaacatcaattat 4615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 11425339 - 11425402
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11425339 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 11425402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 16997914 - 16997977
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16997914 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 16997977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 53631141 - 53631078
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53631141 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 53631078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 26922336 - 26922276
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26922336 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 26922276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 10357104 - 10357041
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10357104 caacaaagatattcacgtcaaaccaaataagatccatcacaacataggttaaatactcttaaac 10357041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14549010 - 14549073
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  14549010 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggctaaatactcttaaac 14549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14630210 - 14630273
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  14630210 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatacacttaaac 14630273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 15344261 - 15344324
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15344261 caacaaagatattcacgtcaaaccaaattagatccatcataacataggttaaatactcttaaac 15344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 37019053 - 37019116
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37019053 caacaaaaatattcacgtcaaaccaagttagatccatcacagcataggttaaatactcttaaac 37019116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 27027977 - 27028089
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || ||||||||||||||||||||||||| ||||||| || || | ||||||||    
T  27027977 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacat-aatatatatagtttaaattaacca 27028075  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  27028076 acaacatcaattat 27028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 35660233 - 35660293
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35660233 caaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactcttaaac 35660293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 3485134 - 3485262
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    ||||||||||| |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||    
T  3485134 cagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 3485231  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||||||||||| ||| ||||  ||||||||    
T  3485232 t-aatatatgtatctcaaattattcaacaaca 3485262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13036445 - 13036382
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||    
T  13036445 caacaaagatattcacgtcaaactaaattagatccatcacaatataggttaaatactcttaaac 13036382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 14508150 - 14508209
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  14508150 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactcttaaac 14508209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 19566582 - 19566523
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  19566582 aaagatattcacgtcaaaccaagttagatttatcacaacataggttaaatactcttaaac 19566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 25513127 - 25513190
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  25513127 caacaaagatattcacatcaaaccaagttagatctatcacaacataggttaaatattcttaaac 25513190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 26445273 - 26445332
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  26445273 aaagatattcacgtcaaaccaagatatatccatcacaacataggttaaatactcttaaac 26445332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 42875183 - 42875246
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  42875183 caacaaagatattcatgtcaaaccaaattagatccatcacaacataggttaaatactcctaaac 42875246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 55582588 - 55582651
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  55582588 caacaaagatattcacatcaaatcaagttagatccatcacaacatagattaaatactcttaaac 55582651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 25091038 - 25091100
Alignment:
Q  257 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  25091038 aacaaagatattcacgtcaaagcaaattagatccatcacaacattggttaaatactcttaaac 25091100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 2585021 - 2584909
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || | ||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  2585021 caacataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 2584923  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  2584922 acaacatcaattat 2584909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 3337489 - 3337546
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3337489 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatactcttaaac 3337546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 21061743 - 21061874
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccaca 110  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||||||||||| ||| |||| || |||||||||||||| ||||||||||||    
T  21061743 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaacttgaatgatataaacatcaatattttctatatcaaacattttccaca 21061841  T
Q  111 taaatatatgtatttcacattaaccaacaacatt 144  Q
    | |||| ||||| || | | ||||||||||||||    
T  21061842 t-aataaatgtaattgaaaataaccaacaacatt 21061874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 45315001 - 45314941
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  45315001 caaagatattcacgtcaaaccaagttagattcatcttaacataggttaaatactcttaaac 45314941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 19609708 - 19609771
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  19609708 caacaaaaatattcgcgtcaaaccaaattaggtccatcacaacataggttaaatactcttaaac 19609771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 6511820 - 6511928
Alignment:
Q  42 atagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    |||||| | ||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||| ||||||||||  |   ||||||||||||    
T  6511820 atagcaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttctacat-aatatatgtagcttgaattaaccaacaa 6511918  T
Q  141 cattaattat 150  Q
    ||| ||||||    
T  6511919 catcaattat 6511928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 14933251 - 14933139
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||||  |||| ||  | | ||||||||    
T  14933251 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctatatcatacattttccacataac-atatatagcttaaattaacca 14933153  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  14933152 acaacatcaattat 14933139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 15114614 - 15114674
Alignment:
Q  263 gatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcct 323  Q
    ||||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  15114614 gatattcacatcaaaccaaattagatccatcagcacataggttaaatactcttaaactcct 15114674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 33243964 - 33243896
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcctc 324  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||| ||||    
T  33243964 caacaaaaatattcacgtcaaatcaaattagatccatcacaacataggttagctactcttaaacacctc 33243896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 2425284 - 2425225
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||    
T  2425284 aaagatattcacatcaaaccaagattgattcatcacaacataggttaaatactcttaaac 2425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 3485295 - 3485358
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| | || ||||||||||||    
T  3485295 caacaaagatattcacgtcaaaccaaattagattcatcacaacatatgctagatactcttaaac 3485358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 9923437 - 9923483
Alignment:
Q  137 acaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  9923437 acaacattaataattaataacatcatataacatcatagttatcaaca 9923483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 14942457 - 14942344
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa-atatatgtatttcacattaacc 135  Q
    ||||||||||  |||||||||||||||||||||| | ||| ||||  ||||||||| |||||||||||||||||||| |||||| ||  | | |||||||    
T  14942457 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctagatcatacattttccacataacatatat-tagcttaaattaacc 14942359  T
Q  136 aacaacattaattat 150  Q
    |||||||| ||||||    
T  14942358 aacaacatcaattat 14942344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 13446694 - 13446806
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| | ||||||||||||||| ||||| ||| ||||||  |||||||||| ||||||||||| ||||| ||||||||||  |   ||||||||    
T  13446694 caacatagcaacgttaataataacaactcgaatgatataaacaacgatattttctatctcatacatttttcacat-aatatatgtagcttgaattaacca 13446792  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  13446793 acaacatcaattat 13446806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 15448248 - 15448145
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  |||||||| |  ||||||||||| |||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  15448248 agcagagacaacaacata-agcaacttg-caacatagaaatattaataataaaaacttgaatgatataaacaacgatattttctatatcatacattttcc 15448151  T
Q  108 acataa 113  Q
    ||||||    
T  15448150 acataa 15448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 20899558 - 20899458
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  20899558 attaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 20899460  T
Q  149 at 150  Q
    ||    
T  20899459 at 20899458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 16026592 - 16026533
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||    
T  16026592 caaagatattcacgtcataccaagttagattcatcacaacatgggtt-aatactcttaaac 16026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 18229899 - 18229974
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 112  Q
    ||||||||||  ||||||| |||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  18229899 caacatagcaatattaatattaacaacttgaatgataataacaacgatattttctatctcatacattttccacata 18229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 11479422 - 11479376
Alignment:
Q  137 acaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  11479422 acaacattaataataaataacatcatataacatcatagttatcaaca 11479376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 9638247 - 9638316
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  9638247 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 9638316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 14629251 - 14629294
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  14629251 acattaatcattaataacatcatatcacatcatagttatcaaca 14629294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 35659973 - 35660016
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  35659973 acattaatcattaataacatcatataacatcgtagttatcaaca 35660016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 19734514 - 19734589
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaac-ttgaatggtataacaacattat 86  Q
    ||||||||||| |||||| |||||| | | ||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  19734514 cagagacaacaacatacaacaacttga-atcatagcaacattaataataaccactttggatggtataacaacattat 19734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 49547987 - 49547946
Alignment:
Q  97 atacattttccacataaatatatgtatttcacattaaccaaca 139  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  49547987 atacattttccacataa-tatatatatttcacattaaccaaca 49547946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 9871378 - 9871309
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 106  Q
    |||||||| | ||| |||||||||||||||| || ||||| ||| | || ||||||||||||||||||||    
T  9871378 caacatagaaacatcaataataacaacttgactgatataaacaataataatttctatatcatacattttc 9871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 51992763 - 51992832
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| || |||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  51992763 caacatagcaacatcaacaataacaacttgaatgatataaacaataataatttccatatcatacattttc 51992832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 15534116 - 15534160
Alignment:
Q  96 catacattttccacataa-atatatgtatttcacattaaccaaca 139  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  15534116 catatattttccacataatatatatatatttcacattaaccaaca 15534160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 22259203 - 22259031
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  22259203 agcagagacaacaacatacaacaacttcacaacatggcatcattaataataacaacttgaatggtataacaacattattttctatatcatacctttt-ca 22259105  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22259104 cat-aatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcatagttatcaaca 22259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 20179355 - 20179246
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20179355 agcaaagacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttcca 20179256  T
Q  109 cataaatata 118  Q
    ||||||||||    
T  20179255 cataaatata 20179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 19140008 - 19140096
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140008 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 19140096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 39936819 - 39936731
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39936819 ttcacaacatagcatcattaataataacaacttgaatggtataaccacattattttctatatcataccttttccacataaatatatgta 39936731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 17907807 - 17907670
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  |||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  17907807 agcagagacaacaacataaaacaacttg-caacatagcaacattaataatatcaacttgaatgatatgaacaacaatattttctatatcatactttttcc 17907709  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  17907708 acataa-tatatgtatttcacattaaccaacaacattaat 17907670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 42818738 - 42818628
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| |||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  42818738 agagacaacaacatacaacaacttcacaacatatcatcgttaataataaaaacttgaatggtataacaacattattttctatatcatatcttttcctcat 42818639  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  42818638 aaatatatgta 42818628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17217802 - 17217938
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||| | ||||||  |||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||    
T  17217802 agcagagacagcaacataaaacaacttg-caacatagcaacattaataataacaacttagatgatataacaacattattttctatatcatacactttcca 17217900  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||| |||||||||| |||| | ||||| |||||||||||    
T  17217901 cat-aatatatgtaattcaaaataaccgacaacattaat 17217938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 5760917 - 5760980
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5760917 caacaaagatattcacgtcaaaccaatttagatccatcacaacataggttaaatactcttaaac 5760980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 20179189 - 20179126
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20179189 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 20179126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 20517785 - 20517722
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20517785 caacaaagatattcacgtcaaaccaagttagatccatcgcaacataggttaaatactcttaaac 20517722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22344426 - 22344489
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22344426 caacaaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 22344489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22356086 - 22356149
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22356086 caacaaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 22356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 36305043 - 36305106
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36305043 caacaaaggtattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 36305106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 39936678 - 39936615
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39936678 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 39936615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 4381457 - 4381397
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4381457 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 4381397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 19140149 - 19140212
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  19140149 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactgttaaac 19140212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22483131 - 22483194
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22483131 caacaaagatattcacatcaaaccaagttagatccatcacaacataagttaaatactcttaaac 22483194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 23888977 - 23889075
Alignment:
Q  49 cattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||    
T  23888977 cattaataataacaacttgaacgatataaacaacaatatcttctatatcatacattttccacat-aatatatgtagctcaaattaaccaacaacattaat 23889075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 6102420 - 6102359
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6102420 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactcttaaa 6102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 22474139 - 22474197
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22474139 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaa 22474197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 18817126 - 18817066
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  18817126 caaagatattcacgtcaaaccaagttacattcatcacaacataggttaaatactcttaaac 18817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 23947414 - 23947549
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttcc 107  Q
    |||||||||| || |||| | ||||||  |||||||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||| |||||    
T  23947414 agcagagacagcaacataaaacaacttg-caacatagcaacattaataataacaacttgaatgatataaacaataatattttctatatcataca-tttcc 23947511  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||| ||||||||||  ||| ||||||||| |||||||||    
T  23947512 acat-aatatatgtagctca-attaaccaaaaacattaat 23947549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 20084305 - 20084245
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  20084305 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaataatcttaa 20084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 22584545 - 22584437
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| ||||||||||||| ||||||||| ||| ||||||  ||||||| |||||||||||||| ||||| ||||||||||  | | ||||||||    
T  22584545 caacatagcaacattaataataaccacttgaatgatataaacaacgatattttcaatatcatacatttttcacat-aatatatgtagcttagattaacca 22584447  T
Q  137 acaacattaa 146  Q
    ||||||||||    
T  22584446 acaacattaa 22584437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 18815487 - 18815427
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  18815487 caaatatattcacgtgaaaccaagttagattcatcacaacataggttaaatactcttaaac 18815427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 17979080 - 17979021
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  17979080 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactattaaac 17979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 22244617 - 22244753
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    |||||||||| || |||| | ||||||  |||||||| | ||||||||||||||||||||| | ||||| ||| | |||||||||||||||||||||||     
T  22244617 agcagagacatcaacataaaacaacttg-caacatagaaacattaataataacaacttgaaagatataaacaataatattttctatatcatacattttca 22244715  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||| ||||||||||  | | |||||||||||||||||||    
T  22244716 acat-aatatatgtagctta-attaaccaacaacattaat 22244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 361874 - 361817
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  361874 agatattcacatcaaaccaaattagattcatcacaacataggttaaatactcttaaac 361817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 17437976 - 17437919
Alignment:
Q  266 attcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcct 323  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17437976 attcacatcaaaccaaattagatccatcaccacataggttaaatactcttaaactcct 17437919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24713388 - 24713457
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaa 80  Q
    |||||||| || |||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  24713388 cagagacagcaacatacaacaacttcacaacataacatcattaataataacaatttgaatgatataacaa 24713457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 5080396 - 5080456
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  5080396 caaatatattcacgtcaaaccaagtaagattcatcacaacataggttaaatacttttaaac 5080456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 36733178 - 36733126
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 311  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  36733178 caaagatattaacgtcaaaccaagttagattcatcacaacataggttaaatac 36733126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 18833855 - 18833918
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||    
T  18833855 caacaaggatattcacatcaaaccaaattagatccatcaccatataggttaaatactcttaaac 18833918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 21346067 - 21346004
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||| ||||||    
T  21346067 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactgttaaac 21346004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 20084467 - 20084358
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||| | | |||| || ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| | | ||    
T  20084467 agcagagacaacaacatacaacaacttga-atcataacaacattaataataaccacttga-tggtataacaacattatttt-tatatcatacaatattca 20084371  T
Q  109 cataaatatatgta 122  Q
    ||| ||||||||||    
T  20084370 cat-aatatatgta 20084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 32949991 - 32950048
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||    
T  32949991 agatattcacgtcaaaccaaattagattcaacacaacataggttaaataatcttaaac 32950048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 19332223 - 19332179
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  19332223 aaaccaagttagatccattacaacataggttaaatactcttaaac 19332179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 45559817 - 45559773
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  45559817 aaaccaagttagatccattacaacataggttaaatactcttaaac 45559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5082880 - 5082817
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| |||||||||||||  |||| |||||||||||||||||    
T  5082880 caacaaggatattcacatcaaaccaaattagatccatcaccgcataagttaaatactcttaaac 5082817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 21513709 - 21513768
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||||||||||||    
T  21513709 aaagatattcacgtcaaaccaagataaattcatcacaaaatatgttaaatactcttaaac 21513768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 42818575 - 42818512
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| | |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  42818575 caacaaataaattcacgtcaaatcaaattagatccatcacaccatagattaaatactcttaaac 42818512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 15635978 - 15635914
Alignment:
Q  50 attaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||||| |||||    
T  15635978 attaataataacaacttgaatgatataaacaacgatattttctatatcacacattttcctcataa 15635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 18118813 - 18118769
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  18118813 aaaccaagttaaatccatcacaacataggttaaatactctaaaac 18118769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 18122388 - 18122344
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  18122388 aaaccaagttagatccatcacaatctaggttaaatactcttaaac 18122344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 20454481 - 20454557
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  20454481 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 20454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 25295536 - 25295580
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  25295536 aaaccaagttaaatccattacaacataggttaaatactcttaaac 25295580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 25757556 - 25757600
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  25757556 aaaccaagttaaatccattacaacataggttaaatactcttaaac 25757600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 12800500 - 12800543
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  12800500 acattaatcattaataacatcatatcacatcatagttatcaaca 12800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 20455238 - 20455305
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 104  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||    
T  20455238 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacattt 20455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 20460216 - 20460283
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 104  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||    
T  20460216 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacattt 20460283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 23914308 - 23914371
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| |||||||||||| |||| | |||||||||| ||||||    
T  23914308 caacaaagatattcacgtccgaccaaattagatccatcataacacatgttaaatactgttaaac 23914371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 31724345 - 31724302
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  31724345 acattaatcattaataacatcacataacatcatagttatcaaca 31724302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23669745 - 23669794
Alignment:
Q  136 aacaacattaattat--taataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  23669745 aacaacattaatcatcttaataacatcatataacatcatagttatcaaca 23669794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 22318765 - 22318662
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | ||||| ||| ||||||||| ||| |||| |||    
T  22318765 caacataacaacattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatatccacgtaa-tatatgtatctcaaattatcca 22318668  T
Q  137 acaaca 142  Q
    ||||||    
T  22318667 acaaca 22318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 39695340 - 39695271
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  39695340 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttttatatcatacattttc 39695271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 19882207 - 19882267
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatca 97  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  19882207 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 19882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 22313234 - 22313270
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatac 311  Q
    |||||||||||||||||||||||||||||| ||||||    
T  22313234 aaaccaagttagatccatcacaacataggtcaaatac 22313270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 6102536 - 6102463
Alignment:
Q  57 ataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacatta 132  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||    
T  6102536 ataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaatta 6102463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 25849258 - 25849189
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    ||||| |||| ||| ||||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  25849258 caacacagcaacatcaataataacaacttgaatgatataaacaataataatttccatatcatacattttc 25849189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 321
Target Start/End: Complemental strand, 21326569 - 21326541
Alignment:
Q  293 cacaacataggttaaatactcttaaactc 321  Q
    |||||||||||||||||||||||||||||    
T  21326569 cacaacataggttaaatactcttaaactc 21326541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 24624072 - 24624116
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||    
T  24624072 aaaccaagttagatctatcattccataggttaaatactcttaaac 24624116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 104)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 50348919 - 50348773
Alignment:
Q  30 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcaca 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  50348919 caacttcacaacatagcatcattaataataacaacttgaatggtataacaatattattttctatatcataccttttccacataaatacatgtatttcaca 50348820  T
Q  130 ttaaccaacaacattaattattaataacatcatataacatcatagtt 176  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  50348819 ttaaccaacaacaataatcattaataacatcatataacatcatagtt 50348773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 14153290 - 14153150
Alignment:
Q  23 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14153290 catacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 14153191  T
Q  123 tttcacattaaccaacaacattaattattaataacatcata 163  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  14153190 tttcacattaaccaacaacattaatcattaataacatcata 14153150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 5206488 - 5206375
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5206488 agcagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 5206389  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  5206388 cataaatatatgta 5206375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 41173205 - 41173092
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41173205 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttcca 41173106  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  41173105 cataaatatatgta 41173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 35065414 - 35065301
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  35065414 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatactttttcca 35065315  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  35065314 cataaatatatgta 35065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 16728503 - 16728614
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16728503 cagagacaacaacatacaacaacttcacaacatatcatcattaataataacaacttgaatggtataacaacattgttttctatatcatacattttccaca 16728602  T
Q  111 taaatatatgta 122  Q
    ||||||||||||    
T  16728603 taaatatatgta 16728614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 17693291 - 17693399
Alignment:
Q  14 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 113  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17693291 agacatcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtatatcaacattattttctatatcatacattttccacataa 17693390  T
Q  114 atatatgta 122  Q
    |||||||||    
T  17693391 atatatgta 17693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 44273706 - 44273805
Alignment:
Q  23 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44273706 catacaacaactccacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 44273805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 14508074 - 14508204
Alignment:
Q  14 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 113  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  14508074 agacaaaaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatataataccttttccacataa 14508173  T
Q  114 atatatgtatttcacattaaccaacaacatt 144  Q
    |||||||||  ||| ||||  ||||||||||    
T  14508174 atatatgtaactcaaattattcaacaacatt 14508204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 15932338 - 15932228
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15932338 agagacagcagcatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacaatttccacat 15932239  T
Q  112 aaatatatgta 122  Q
    ||| |||||||    
T  15932238 aaacatatgta 15932228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 11258685 - 11258798
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||| ||| || |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11258685 agcagaaacatcaacatactacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 11258784  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  11258785 cataaatatatgta 11258798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 45531455 - 45531342
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  45531455 agcagagacaataacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattatcttttatatcatacattttcca 45531356  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  45531355 cataaatatatgta 45531342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 35353819 - 35353930
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  35353819 cagagacaacaacatacaacaacttcacaacatagcataattaataataacaacttaaaaggtataacaacattattttctataacatacattttccaca 35353918  T
Q  111 taaatatatgta 122  Q
    ||||||||||||    
T  35353919 taaatatatgta 35353930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 22307392 - 22307304
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22307392 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataaatatatgta 22307304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 19884355 - 19884244
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| ||||| || |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19884355 cagagacatcaacatacaacaactccataacataacatcattaataataacaacttgaatggtataaaaacattattttctatatcatacattttccaca 19884256  T
Q  111 taaatatatgta 122  Q
    ||||||||||||    
T  19884255 taaatatatgta 19884244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 17519707 - 17519594
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  17519707 agcagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttca 17519608  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  17519607 cataaatatatgta 17519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 17534569 - 17534456
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  17534569 agcagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttca 17534470  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  17534469 cataaatatatgta 17534456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 40807239 - 40807327
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807239 ttcacaacatagcatcattaataataataactttaatggtataacaacattattttctatatcatacattttccacataaatatatgta 40807327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 2842275 - 2842183
Alignment:
Q  30 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  2842275 caacttcacaacatagcatcattaataataaaaacttgaatgatataacaacattattttctatatcataccttttccacataaatatgtgta 2842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 17538350 - 17538438
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17538350 ttcacaacatagcttcattaataataacaactttaatggtataacaacattattttctatatcataccttttccacataaatatatgta 17538438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 6156090 - 6156153
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156090 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 6156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 14153067 - 14153004
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14153067 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 14153004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 24546221 - 24546284
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24546221 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 24546284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 50756049 - 50755986
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50756049 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 50755986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 5215083 - 5215159
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacatta 85  Q
    ||||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5215083 agcagagacaacaacatacaacaatttcacaacatagcatcataaataataacaacttgaatggtataacaacatta 5215159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 2842130 - 2842067
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2842130 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 2842067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14508232 - 14508295
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14508232 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 14508295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17046546 - 17046609
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17046546 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 17046609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17207726 - 17207789
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17207726 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactcttaaac 17207789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17538491 - 17538554
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17538491 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 17538554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17693452 - 17693515
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17693452 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 17693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 35065248 - 35065185
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35065248 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 35065185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 40807380 - 40807443
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40807380 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 40807443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 50348694 - 50348631
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348694 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactcttaaac 50348631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 54876151 - 54876088
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54876151 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 54876088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 44273858 - 44273920
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44273858 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaa 44273920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 9511833 - 9511772
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9511833 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaa 9511772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 9519808 - 9519747
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9519808 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaa 9519747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 11192465 - 11192528
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  11192465 caacaaagatattcacgtcaaaccaaattaggtccatcacaacataggttaaatactcttaaac 11192528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 13519667 - 13519729
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13519667 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 13519729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 15565898 - 15565961
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15565898 caacaaagatatttacgtcaaaccaagttagatccaacacaacataggttaaatactcttaaac 15565961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17519541 - 17519478
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17519541 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactcttaaac 17519478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17534403 - 17534340
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17534403 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactcttaaac 17534340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 20417293 - 20417429
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| || |||||  ||||||| ||  |||||||||||||||||||||| ||||| ||||| ||| || |||||||||||||||||    
T  20417293 agcagagacaacaacataaac-aacttg-caacatatcaatattaataataacaacttgaatgatataaacaacaatatcttttatatcatacattttcc 20417390  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||| ||||||||||  ||| |||||||||||||||||||    
T  20417391 acat-aatatatgtagctcaaattaaccaacaacattaat 20417429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 22307251 - 22307188
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  22307251 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactcttaaac 22307188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 35353983 - 35354046
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  35353983 caacaaagatattcacgtcaaactaaattagatccatcacaacataggttaaatactcttaaac 35354046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 41173039 - 41172976
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  41173039 caacaaagatattcacgtcaaaccaaattacatccatcacaacataggttaaatactcttaaac 41172976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 54330970 - 54330910
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  54330970 caaagatattcacgtcaaatcaagttagattcatcacaacataggttaaatactcttaaac 54330910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5206322 - 5206259
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  5206322 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaataatcttaaac 5206259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 11258851 - 11258914
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  11258851 caacaaagatattcacgtcaaaccaaattatatctatcacaacataggttaaatactcttaaac 11258914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 15932175 - 15932112
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  15932175 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagatgaaatactcttaaac 15932112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17685511 - 17685448
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  17685511 caacaaagatattcacgtcaaaccaaattagatccatcacaagatagattaaatactcttaaac 17685448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 10562921 - 10563019
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||| | ||| ||||| | || ||| ||||||||||||||||    
T  10562921 agcagagataacaacatacaacaacttcacaacatagcatcattaaaaataacaacttgaacgatataaacaataataatttttatatcatacattttc 10563019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 13179399 - 13179492
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||||||| ||||    
T  13179399 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaattaaccaacaacaataat 13179492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 42353341 - 42353276
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcc 322  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  42353341 caacaaagatattcacgtcaaaccca-ttagatccatcacaacatacgttaaatactcttaaactcc 42353276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 10550510 - 10550622
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || |||||||||||||||||||||||||||| |||| ||  | | ||||||||    
T  10550510 caacatagcaatattaataataacaacttgaatgatataaacaacgataatttctatatcatacattttccacataaa-atatatagcttaaattaacca 10550608  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  10550609 acaacatcaattat 10550622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 14441562 - 14441615
Alignment:
Q  266 attcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14441562 attcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 14441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 14818278 - 14818378
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  14818278 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 14818376  T
Q  149 at 150  Q
    ||    
T  14818377 at 14818378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 16059489 - 16059580
Alignment:
Q  54 ataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||| |||||||||| | ||||||||| |||| |||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  16059489 ataataataacttgaatgatttaacaacatcattt-ctatatcatacactttccacataa-tatatgtatttcaaaataaccaacaacattaat 16059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 3394812 - 3394736
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  3394812 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 3394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19569037 - 19568973
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagtta-gatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  19569037 caacaaagatattcacgtcaaaccaaattaaggtccatcacaacataggttaaatactcttaaac 19568973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 50351665 - 50351605
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  50351665 caaagatattcacgtcaaaccaaattagatccataacaacatatgttaaatactcttaaac 50351605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 10542126 - 10542063
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||    
T  10542126 caacaaagatattcacgtccaaccaagttagatccatcacaacacatgttaaatactgttaaac 10542063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 14568723 - 14568664
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  14568723 aaagatattcacgtcaaaccaagatagattcatcacaacataggttagatactcttaaac 14568664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 18700141 - 18700079
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||    
T  18700141 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaa 18700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 16044629 - 16044720
Alignment:
Q  54 ataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||| |||||||||| | ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| | |||||||||||||||||    
T  16044629 ataataataacttgaatgatttaacaacatcattt-ctatatcatacactttccgcataa-tatatgtatttcaaaataaccaacaacattaat 16044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 13523221 - 13523145
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||| |||||    
T  13523221 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 13523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 23395857 - 23395786
Alignment:
Q  51 ttaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  23395857 ttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgta 23395786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 12470186 - 12470249
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||| | |||||||||||||||||    
T  12470186 caacaaagatattcacgtccaaccaaattagatcaatcacaacacatgttaaatactcttaaac 12470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 12511232 - 12511295
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| |||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  12511232 caacaaagatcttcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 12511295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 40812217 - 40812280
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  40812217 caacaaggatattcacatcaaaccaaattagatacatcaccacataggttaaatactcttaaac 40812280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 49900112 - 49900179
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcct 323  Q
    |||||| ||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  49900112 caacaaggatattcgcatcaaaccaaattagatccatcaccacataggttaaatactcttaaaatcct 49900179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 17691473 - 17691427
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacatag 302  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  17691473 caacaaagatattcacgtcaaaccaaattagatccatcacaacatag 17691427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 43889467 - 43889405
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| | ||||||||||||||||    
T  43889467 caacaaagatattcacgtccaaccaaattagatccatgacaacacatgttaaatactcttaaa 43889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 13520618 - 13520515
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  ||||||||||  |||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||    
T  13520618 agcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcatacattttcc 13520521  T
Q  108 acataa 113  Q
     |||||    
T  13520520 tcataa 13520515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 17548361 - 17548249
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||  | |||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  17548361 caacatagcaatattaataacaacaacttgaatgatataaacaacgattttttctatatcatacattttccacataa-tatatatagcttgaattaacca 17548263  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  17548262 acaacatcaattat 17548249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 52338775 - 52338663
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataac-aacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| |||||  |||   ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||    
T  52338775 caacatagcaatattaataacaacaacttgaatgatataaataacgacattttctatatcatacattttccacat-aatatatatagcttaaattaacca 52338677  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  52338676 acaacatcaattat 52338663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 6819367 - 6819427
Alignment:
Q  54 ataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||    
T  6819367 ataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 6819427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 18367556 - 18367492
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||||||||    
T  18367556 attaataataacaacttgaatgatataaacaacgatattttcaatatcatacattttccacataa 18367492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 33564372 - 33564416
Alignment:
Q  139 aacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  33564372 aacattaatcattaataacatcatataacatcatagttatcaaca 33564416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14671208 - 14671271
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | |||||||||| ||||||    
T  14671208 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatactgttaaac 14671271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14682707 - 14682770
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | |||||||||| ||||||    
T  14682707 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatactgttaaac 14682770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 42353463 - 42353374
Alignment:
Q  51 ttaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  42353463 ttaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 42353374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 6158637 - 6158706
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  6158637 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 6158706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 12952448 - 12952489
Alignment:
Q  278 ccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  12952448 ccaagttagatctatcacaacataggttaaatactcttaaac 12952489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 14642362 - 14642293
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  14642362 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 14642293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 16050114 - 16050189
Alignment:
Q  62 aacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaaca 139  Q
    |||||||||| ||||||||||| |||| |||||||||||| ||||||||| ||||||||||| ||| | |||||||||    
T  16050114 aacttgaatgatataacaacatcattt-ctatatcatacactttccacat-aatatatgtatatcaaaataaccaaca 16050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 179517 - 179441
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  ||||||| |||||||||||||| || |||||||  |||||||||||||| ||||||| |||||||    
T  179517 caacatagcaatattaatagtaacaacttgaatgataataacaacgatattttctatatcaaacattttgcacataa 179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 25104850 - 25104806
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  25104850 aaaccaagttagatccaccacaacataagttaaatactcttaaac 25104806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 43928741 - 43928796
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||| | |||| ||||| |||||| |||||||||||||||    
T  43928741 agatattcacgtcaaaccaaataagattcatcagaacatatgttaaatactcttaa 43928796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 52213272 - 52213175
Alignment:
Q  53 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    ||||||||||| ||||||| ||||| ||||  |||||||||||| ||||||||||||||||| |||||  |  | | ||||||||||||||| ||||||    
T  52213272 aataataacaatttgaatgatataaacaacgatattttctatataatacattttccacataa-tatatacaacttaaattaaccaacaacataaattat 52213175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 14250927 - 14250861
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||  |||||||| | || |||| |||||||||||||||    
T  14250927 caacatagcaacatcaataataacaacttgaat--tataacaataataatttccatatcatacattttc 14250861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16180522 - 16180481
Alignment:
Q  142 attaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  16180522 attaatcattaataacatcacataacatcatagttatcaaca 16180481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 37038058 - 37038127
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||| ||||||| ||| ||||| | || ||||||||||||||||||||    
T  37038058 caacatagcaacatcaataataacaatttgaatgatataaacaataataatttctatatcatacattttc 37038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 42325033 - 42324964
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  42325033 caacatagcaacatgaataataacaacttgaatgatataaacaataataatttccatatcatacattttc 42324964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 17937931 - 17937975
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||    
T  17937931 aaaccaaattagatccaacacaacctaggttaaatactcttaaac 17937975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 18739300 - 18739344
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||    
T  18739300 aaaccaagttagatccaacacaatctaggttaaatactcttaaac 18739344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 11191416 - 11191459
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  11191416 acattaatcattaataacatcacataacatcatagttattaaca 11191459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 11561995 - 11562038
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  11561995 acattaatcattaataacatcacataacatcatagttattaaca 11562038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 14519583 - 14519625
Alignment:
Q  141 cattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  14519583 cattaattatgaacaacatcatataacatcatatttatcaaca 14519625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 54520771 - 54520812
Alignment:
Q  97 atacattttccacataaatatatgtatttcacattaaccaaca 139  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  54520771 atacattttccacataa-tatatatatttcacattaaccaaca 54520812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 13519549 - 13519593
Alignment:
Q  55 taataacaacttgaatggtataacaacattattttctatatcatac 100  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  13519549 taataaccacttggatggtataacaacatta-tttctatatcatac 13519593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 14519681 - 14519710
Alignment:
Q  290 catcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||    
T  14519681 catcacaacataggttaaatactcttaaac 14519710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 4813250 - 4813294
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||| |||||   ||||||||||||||||||||||    
T  4813250 aaaccaagttagattcatcatgtcataggttaaatactcttaaac 4813294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 8e-52; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 19675969 - 19676100
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||    
T  19675969 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcataccttttgca 19676068  T
Q  109 cataaatatatgtatttcacattaaccaacaa 140  Q
    ||||||||||||||||||| |||| |||||||    
T  19676069 cataaatatatgtatttcaaattatccaacaa 19676100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 42912268 - 42912381
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42912268 agcaaagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 42912367  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  42912368 cataaatatatgta 42912381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 16059134 - 16059035
Alignment:
Q  23 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16059134 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataaatatatgta 16059035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 4596679 - 4596566
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  4596679 agcagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattagtttctatatcataccttttcca 4596580  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  4596579 cataaatatatgta 4596566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 20587896 - 20588009
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20587896 agcagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttcca 20587995  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  20587996 cataaatatatgta 20588009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 20592434 - 20592547
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20592434 agcagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttcca 20592533  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  20592534 cataaatatatgta 20592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 21046880 - 21046770
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  21046880 agagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 21046781  T
Q  112 aaatatatgta 122  Q
    | |||||||||    
T  21046780 agatatatgta 21046770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 20634469 - 20634356
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  20634469 agcagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttttatatcatgccttttcca 20634370  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  20634369 cataaatatatgta 20634356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 1642681 - 1642805
Alignment:
Q  37 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||| ||| || ||||||| |||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| |    
T  1642681 acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctataacatacatttt-cacat-aatatatgtatttcacattaacta 1642778  T
Q  137 acaacattaattattaataacatcata 163  Q
    ||||||||||| |||||||||||||||    
T  1642779 acaacattaatcattaataacatcata 1642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 41227513 - 41227425
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  41227513 ttcacaacatagcatcattaatgataacaaattgaatggtataacaacattattttctatatcataccttttccacataattgtatgta 41227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 42696935 - 42697070
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||| | ||||||  |||| ||||| ||||||||| |||| |||| ||| |||||||||||||||||||||||||||| |||| ||    
T  42696935 agcagagacaacaacataaaacaacttg-caacgtagcaacattaataacaacatcttggatgatataacaacattattttctatatcatacctttt-ca 42697032  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||| ||||||||||||||||||||| ||| |||||||||    
T  42697033 cat-aatatatgtatttcacattaatcaagaacattaat 42697070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20588063 - 20588126
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20588063 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 20588126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20592601 - 20592664
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20592601 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 20592664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 20634303 - 20634240
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20634303 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 20634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 39060480 - 39060543
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39060480 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 39060543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 4596513 - 4596452
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4596513 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaa 4596452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 18275157 - 18275269
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  18275157 caacatagcaacgttaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 18275255  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  18275256 acaacatcaattat 18275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 52983387 - 52983499
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  52983387 caacataacaacattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatgtagcttaaattaacca 52983485  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  52983486 acaacatcaattat 52983499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 41226116 - 41226056
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41226116 caaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 41226056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 41227369 - 41227309
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41227369 caaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 41227309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 50544239 - 50544299
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50544239 caaatatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 50544299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 1642980 - 1643043
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1642980 caacaaagatattcacgtcaaatcaagttagatccatcaaaacataggttaaatactcttaaac 1643043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 7052723 - 7052661
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7052723 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 7052661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 22824074 - 22824011
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  22824074 caacaaagatattcacgtcaaactaagttagatccatcacaacataggttaaataatcttaaac 22824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 51476218 - 51476327
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| ||||||||||||||||||||||  ||| ||||||  |||| ||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  51476218 caacatagcaacattaataataacaacttgaataatataaacaacggtattatctatatcatacattttccacat-aatatatgtagcttaaattaacca 51476316  T
Q  137 acaacattaat 147  Q
    |||||||||||    
T  51476317 acaacattaat 51476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 12710278 - 12710335
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12710278 agatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 12710335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 16058982 - 16058919
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  16058982 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagcttaaataatcttaaac 16058919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 18120993 - 18121052
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  18120993 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactcttaaac 18121052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 19676095 - 19676158
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  19676095 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatattaaatactcttaaac 19676158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 38887755 - 38887693
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38887755 caacaaagatatccacgtcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 38887693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 51082600 - 51082663
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  51082600 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactcttaaac 51082663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 51323659 - 51323722
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  51323659 caacaaagatattcatgtcaaaccaaattagatccatcacaacatatgttaaatactcttaaac 51323722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 45496329 - 45496391
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  45496329 caacaaagatattcatgtcaaaccaagttagattaatcacaacataggttaaatactcttaaa 45496391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 14238280 - 14238217
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||    
T  14238280 caacaaagatattcacgtcaaacaaaattagattcatcacaacataggttagatactcttaaac 14238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 21239963 - 21239900
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  21239963 caacaaaaatattcacgtcaaaccaaattagatccatcacaacataggttaaaaattcttaaac 21239900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 24720357 - 24720298
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  24720357 aaagatattcacgtcaaaccaagatagattcatcgcaacataggttaaatactcttaaac 24720298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 42912434 - 42912497
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  42912434 caacaaagatattcacgtcaaaccaaattagatcaatcacaacatatattaaatactcttaaac 42912497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 21046716 - 21046654
Alignment:
Q  257 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  21046716 aacaaagatattcacatcaaaccaaattatatccatcacaacataggttaaatacacttaaac 21046654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 6833602 - 6833666
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaactcct 323  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  6833602 caaatatattcacatcaaaccaagttagattcatcacaacataggttatatactcttaagctcct 6833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 14238441 - 14238313
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| |||||| | | |||| || ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||    
T  14238441 cagagacagcaacatacaacaacttga-atcataacaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 14238344  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||||||||||| ||| ||||  ||||||||    
T  14238343 t-aatatatgtatctcaaattattcaacaaca 14238313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 48301316 - 48301379
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  48301316 caacaaggatattcacatcaaaccaaattagatctatcaccacataggttaaatactcttaaac 48301379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 18270518 - 18270615
Alignment:
Q  53 aataataacaacttgaatggtataacaa-cattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    ||||||||||||| ||||| ||||| || || |||||||||||||||||||||||||||| ||||||||||  |   ||||||||||||||| ||||||    
T  18270518 aataataacaactagaatgatataaaaaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaaccaacaacatcaattat 18270615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 28477428 - 28477374
Alignment:
Q  264 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  28477428 atattcatgtcaaaccaagttagatccatcacaacataggtaaaatattcttaaa 28477374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 7052855 - 7052756
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||| | ||||||||||| ||| ||||  ||||||    
T  7052855 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacct-aatatatgtatctcaaattattcaacaa 7052758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 13528604 - 13528492
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  13528604 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa-tatatatagcttgaattaacca 13528506  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  13528505 acaacatcaattat 13528492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 38887927 - 38887848
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||    
T  38887927 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgta 38887848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 7792662 - 7792586
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| |||  |||||  |||||||||||||||||||||||| |||||    
T  7792662 caacatagcaatattaataataacaacttgaatgatatttacaacgatattttctatatcatacattttcctcataa 7792586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 11809251 - 11809199
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaa 308  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  11809251 caacaatgatattcacgtcaacccaagttagattcatcacaacataggttaaa 11809199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 44822919 - 44822855
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||| |||||    
T  44822919 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 44822855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 18823860 - 18823960
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    |||||||| ||||||||||||| ||||| ||||   ||||||||||||||| ||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  18823860 attaataacaacaacttgaatgatataaacaacgacattttctatatcatatattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 18823958  T
Q  149 at 150  Q
    ||    
T  18823959 at 18823960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 38057463 - 38057394
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  38057463 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 38057394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 21181135 - 21181067
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatttt 105  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||| |||||    
T  21181135 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatatatttt 21181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 23073270 - 23073322
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaa 308  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||| ||||||    
T  23073270 caacaatgatattcacgtcaacccaagttagattcatcacaacataagttaaa 23073322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 24815647 - 24815586
Alignment:
Q  50 attaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| |||||  ||  |||||||||||||||||||||||| |||||    
T  24815647 attaataataacaacttgaatgatataa--acgatattttctatatcatacattttcctcataa 24815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 13302045 - 13302132
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||| |||||||  || ||| ||||| ||||||||    
T  13302045 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatagatctcaaattaaacaacaaca 13302132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 19762037 - 19761968
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||||| ||| | || |||| |||||||||||||||    
T  19762037 caacatagcaacatcaataataacaacttgaatgatataatcaataataatttccatatcatacattttc 19761968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 10813333 - 10813273
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatca 97  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  10813333 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 10813273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 17903821 - 17903779
Alignment:
Q  141 cattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  17903821 cattaattatgaacaacatcatataacatcatatttatcaaca 17903779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 8276802 - 8276733
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttc 106  Q
    ||||||| || ||| ||||| ||||||||||||| |||| |||| | || ||||||||||||||||||||    
T  8276802 caacataacaacatcaataacaacaacttgaatgatatatacaataataatttctatatcatacattttc 8276733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Complemental strand, 17902395 - 17902366
Alignment:
Q  290 catcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||    
T  17902395 catcacaacataggttaaatactcttaaac 17902366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 51082496 - 51082567
Alignment:
Q  69 atggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  51082496 atggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 51082567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 14793975 - 14793947
Alignment:
Q  155 aacatcatataacatcatagttatcaaca 183  Q
    |||||||||||||||||||||||||||||    
T  14793975 aacatcatataacatcatagttatcaaca 14793947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 17318956 - 17318846
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17318956 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 17318857  T
Q  109 cataaatatat 119  Q
    |||||||||||    
T  17318856 cataaatatat 17318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 15891537 - 15891424
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15891537 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcatacattttcca 15891438  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  15891437 cataaatatatgta 15891424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 27126309 - 27126198
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27126309 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 27126210  T
Q  111 taaatatatgta 122  Q
    ||||| ||||||    
T  27126209 taaatttatgta 27126198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 31733926 - 31734039
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||    
T  31733926 agcagagacaacaacatacaacaacttcacaacataacatcattaataataacaacttaaatggtataacaacattattttctatatcatacctttttca 31734025  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  31734026 cataaatatatgta 31734039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 23151075 - 23150987
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23151075 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgta 23150987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 18708743 - 18708830
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  18708743 ttcacaacatagcatcattaataataa-aacttgaatggtataacaacattattttctatatcataccttttccacataactatatgta 18708830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 31735732 - 31735624
Alignment:
Q  39 aacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaa 137  Q
    ||||||||| ||||||||||||||| ||||||| ||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  31735732 aacatagcaacattaataataacaatttgaatgatataaacaacaatattttctatatcaaacattttccacataa-tatatgtatttcaaattaaccaa 31735634  T
Q  138 caacattaat 147  Q
    ||||||||||    
T  31735633 caacattaat 31735624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 24441140 - 24441251
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  24441140 agcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatggtataacaacattatcttcaatatcataccttttcca 24441237  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  24441238 cataaatatatgta 24441251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 7827356 - 7827419
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7827356 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 7827419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17318790 - 17318727
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17318790 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 17318727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23150934 - 23150871
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23150934 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 23150871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 13285094 - 13285156
Alignment:
Q  257 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13285094 aacaaagatattcacgtcaaaccaagttagatccatcacaatataggttaaatactcttaaac 13285156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 7827234 - 7827303
Alignment:
Q  53 aataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  7827234 aataataacaacttgaatggtataacaaaattattttctatatcatacctttttcacataaatatatgta 7827303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19655897 - 19655834
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  19655897 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactcttaaac 19655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22556633 - 22556696
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  22556633 caacaaagatattcacgttaaaccaagttagatccatcacaaaataggttaaatactcttaaac 22556696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 27126145 - 27126082
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27126145 caacaaagatattcacgtcaaaccaaattaaatccatcacaacataggttaaatactcttaaac 27126082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 22212303 - 22212211
Alignment:
Q  53 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacatta 145  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||| ||||||||||| ||| |||||||||||||||||    
T  22212303 aataataacaacttgaatgatataaacaaaattattttctatatcatacaattttcacat-aatatatgtatctcaaattaaccaacaacatta 22212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 31734094 - 31734155
Alignment:
Q  258 acaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31734094 acaaagatattcacgtcaaaccaaattagatctatcacaacataggttaaatactcttaaac 31734155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 19234584 - 19234644
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  19234584 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatacttttaaac 19234644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 25921117 - 25921177
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  25921117 caaagatattcacgtcaaaccaagttagtttcatcacaacataggttaaatactcttaaac 25921177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 32259233 - 32259293
Alignment:
Q  257 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32259233 aacagagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaa 32259293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 18708883 - 18708946
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  18708883 caacaaagatattcatgtcaaactaaattagatccatcacaacataggttaaatactcttaaac 18708946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23491839 - 23491776
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  23491839 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttagatactcttaaac 23491776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23497437 - 23497374
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  23497437 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttagatactcttaaac 23497374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 27318223 - 27318160
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  27318223 caacaaagatattcacgtcaaactaaattagatccatcacaacgtaggttaaatactcttaaac 27318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 27322227 - 27322172
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattatttt 89  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27322227 ttcacaacatagcatcattaataacaacaacttgaatggtataacaacattatttt 27322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 28947728 - 28947791
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  28947728 caacaaaaatattcacgtcaaaccaaattaggtccatcacaacataggttaaatactcttaaac 28947791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 29044650 - 29044709
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  29044650 aaagatattcacgtcaaaccaagttagattcatcacaacataggttatatactcttaaac 29044709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 13751191 - 13751052
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||    
T  13751191 agcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttcc 13751094  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    |||| ||||||| ||  | | ||||||||||||||| ||||||    
T  13751093 acat-aatatatatagcttaaattaaccaacaacatcaattat 13751052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 18702948 - 18703010
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  18702948 caacaaagatattcatgtcaaactaaattagatccatcacaacataggttaaatactcttaaa 18703010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 18585007 - 18585067
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  18585007 caaagatattcacgtcaaaccaagttagattcatcacaacttaggttaaatacttttaaac 18585067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 18658448 - 18658524
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  18658448 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 18658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 19444092 - 19443980
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  19444092 caacatagcaatattaataacaacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa-tatatatagcttgaattaacca 19443994  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  19443993 acaacatcaattat 19443980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 610982 - 611058
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||| |||||    
T  610982 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 611058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 29848315 - 29848239
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||| |||||    
T  29848315 caacatagcaatattaataataacaacttgaatgatataaacaacaatattttctatatcacacattttcctcataa 29848239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 15705279 - 15705216
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  15705279 caacaaaaatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 15705216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19773377 - 19773314
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| || ||| ||||||||||||||||| | |||||||||||||||||    
T  19773377 caacaaagatattcacgtccaatcaaattagatccatcacaacacatgttaaatactcttaaac 19773314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 18455734 - 18455677
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  18455734 aaagatattcacgtcaa-ccaagttatattcatcacaacataggttaaatactcttaaa 18455677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 16133482 - 16133370
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  16133482 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa-tatatatagcttgaattaacca 16133384  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  16133383 acaacatcaattat 16133370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 15891369 - 15891327
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacatag 302  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  15891369 aaagatattcacgtcaaaccaaattagatccatcacaacatag 15891327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 18398325 - 18398366
Alignment:
Q  278 ccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18398325 ccaagttagatccatcacaacataagttaaatactcttaaac 18398366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 13764592 - 13764668
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  13764592 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 13764668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 18927964 - 18928010
Alignment:
Q  137 acaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  18927964 acaacattaatcattaaaaacatcatataacatcatagctatcaaca 18928010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20411511 - 20411462
Alignment:
Q  136 aacaacattaattat--taataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  20411511 aacaacattaatcatcttaataacatcatataacatcatagttatcaaca 20411462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 22806217 - 22806271
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 310  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||| | ||||||||    
T  22806217 caacaaagatattcacgtccaaccaaattagatccatcaccacacatgttaaata 22806271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 27318314 - 27318276
Alignment:
Q  84 tattttctatatcatacattttccacataaatatatgta 122  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  27318314 tattttatatatcatacattttccacataaatatatgta 27318276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7825864 - 7825913
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataat 58  Q
    |||||||||| || |||||| ||||||||||||||| |||||||||||||    
T  7825864 agcagagacagcaacatacaacaacttcacaacataacatcattaataat 7825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 19829764 - 19829695
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||| ||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  19829764 caacatagcaacatcaataatatcaacttgaatgatataaacaataataatttctatatcatacattttc 19829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 22523617 - 22523573
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||   ||||||||||||||||||||||    
T  22523617 aaaccaagttagatccatcatgccataggttaaatactcttaaac 22523573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 24267019 - 24267119
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    |||||||| ||||||||||||| ||||| |||    ||||| ||||||||||||||| ||||| ||||||| ||  | | ||||||||||||||| ||||    
T  24267019 attaataacaacaacttgaatgatataaacaaggacattttttatatcatacatttttcacat-aatatatatagcttaaattaaccaacaacatcaatt 24267117  T
Q  149 at 150  Q
    ||    
T  24267118 at 24267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 25601915 - 25601882
Alignment:
Q  286 gatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| |||||||||||||||||||||||    
T  25601915 gatccatcaccacataggttaaatactcttaaac 25601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 18458606 - 18458574
Alignment:
Q  151 taataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||||||| ||||||||||||||||    
T  18458606 taataacatcatataaaatcatagttatcaaca 18458574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 36839392 - 36839527
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36839392 agcagagacaacaacatacgacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacactattttctatatcatacattttcca 36839491  T
Q  109 cataaatatatgtatttcacattaaccaacaacatt 144  Q
    ||||||||||||||  ||| ||||  ||||||||||    
T  36839492 cataaatatatgtaactcaaattattcaacaacatt 36839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 28653336 - 28653223
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  28653336 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattatctatatcataccttttcca 28653237  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  28653236 cataaatatatgta 28653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 9975146 - 9975259
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9975146 agcagagacaacaacatacaacaactttacaacatagcatcattaataataacaacttgaatggtataacaacattattttctataccatacattttcca 9975245  T
Q  109 cataaatatatgta 122  Q
    |||| |||||||||    
T  9975246 catatatatatgta 9975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 27485283 - 27485191
Alignment:
Q  30 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27485283 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 27485191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 17306705 - 17306818
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  17306705 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattttataacaatattattttctatatcataccttttcca 17306804  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  17306805 cataaatatatgta 17306818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 23969457 - 23969344
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||| ||| || |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23969457 agcagatacatcaacatactacaacttcacaacatatcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 23969358  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  23969357 cataaatatatgta 23969344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 24515404 - 24515517
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24515404 agcagagacaacaacatacaacaacttcgcaacatagcatcattaatcataacaacttcaatggtataacaacattattttctatatcataccttttcca 24515503  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  24515504 cataaatatatgta 24515517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 19358152 - 19358262
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    ||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  19358152 agagacatcaacatacaacaactttacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 19358251  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  19358252 aaatatatgta 19358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 24781649 - 24781561
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  24781649 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttccacataaatatatgta 24781561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 5031922 - 5031851
Alignment:
Q  51 ttaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5031922 ttaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 5031851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 5985336 - 5985435
Alignment:
Q  46 catcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacatta 145  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||    
T  5985336 catcaataataacaacaacttggatgatataacaacattattttctatatcatacctttt-cacat-aatatatgaatttcacattaaccaacaacatta 5985433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 9975313 - 9975376
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9975313 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 9975376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22686224 - 22686287
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22686224 caacaaagttattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 22686287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 36839555 - 36839618
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36839555 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 36839618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 14693456 - 14693561
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    ||||||| ||||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| | ||| ||  ||| |||||||||| |    
T  14693456 catagcaacattaatcataacaacttgaatgatataacatcaatattttctatatcatacattttccacataattgtatatagctcaaattaaccaacca 14693555  T
Q  141 cattaa 146  Q
    ||||||    
T  14693556 cattaa 14693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5031798 - 5031735
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5031798 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactcttaaac 5031735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 24781508 - 24781445
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24781508 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatattcttaaac 24781445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 25587354 - 25587291
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  25587354 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaattttcttaaac 25587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 43707952 - 43707889
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  43707952 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaataatcttaaac 43707889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 10897625 - 10897487
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||| ||  | |||||| |||| ||||  ||||||    
T  10897625 agcagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaacatgaatattttgtataacatatcttttcc 10897527  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||||||||||||  ||| ||| |||||||||||||||    
T  10897526 acataaatatatgtagctcaaatttaccaacaacattaat 10897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23969291 - 23969228
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  23969291 caacaaagatatttacgtcaaaccaaattagatcaatcacaacataggttaaatactcttaaac 23969228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 24515570 - 24515633
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24515570 caacaaagatattcatgtcaaaccaaattagatccatcacaacatagattaaatactcttaaac 24515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 1384350 - 1384290
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  1384350 caaagatattcacgtcaaaccaagttagattcatcacagcataggttaaatactcgtaaac 1384290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 27851836 - 27851922
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaac 141  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  27851836 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacataa-tatatgtatttcaaattaaccaacaac 27851922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17306871 - 17306934
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||    
T  17306871 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatgatcttaaac 17306934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19201869 - 19201806
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  19201869 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactcttaaac 19201806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 21316325 - 21316266
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  21316325 aaagatattcacgtcaaatcaagatagattcatcacaacataggttaaatactcttaaac 21316266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 21336116 - 21336057
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  21336116 aaagatattcacgtcaaaccaagatagattcatcccaacataggttaaatactcttaaac 21336057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 23069118 - 23069055
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  23069118 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 23069055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 23609865 - 23609924
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  23609865 aaagatattcacgtcaaaccaagttagatttaccacaacataggttaaatactcttaaac 23609924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 27485138 - 27485075
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  27485138 caacaaatatattcacgtcaaaccaaattagatccatcaaaacatatgttaaatactcttaaac 27485075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 28345743 - 28345680
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  28345743 caacaaagatattcatgtcaaaccaagttagatccatcacaacatagattaagtactattaaac 28345680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 28653170 - 28653107
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||    
T  28653170 caacaaagatattcacgtgaaaccaaattagatccatcacaagatatgttaaatactcttaaac 28653107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 24273921 - 24273864
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  24273921 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatacacttaaac 24273864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 21368491 - 21368554
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||||||||    
T  21368491 caacaaggatattcacatcaaaccaaattagatccattaccacataggttaaatactcttaaac 21368554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 27860542 - 27860634
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||| ||||||| ||| |||  ||||||||||||||||||    
T  27860542 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatctatctcaatttaaccaacaacattaat 27860634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 44071733 - 44071841
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || || |||||||||||||||||| | ||| ||||||| ||||| |||||||||||| ||||||||| ||||||||||| ||| |||| |||    
T  44071733 caacataacaacactaataataacaacttgaacgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatgtatctcaaattatcca 44071830  T
Q  137 acaacattaat 147  Q
    |||||| ||||    
T  44071831 acaacaataat 44071841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 31520371 - 31520435
Alignment:
Q  50 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| || ||||||   ||||||||||||||||||||||||||||||    
T  31520371 attaataataacaacttgaatgataataacaatgatattttctatatcatacattttccacataa 31520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 18391124 - 18391038
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    |||||||||||||||||| ||| ||||||| ||||| | |||||||| ||||||||||| ||||||||||  ||| ||||||||||||    
T  18391124 ataataacaacttgaatgatatgaacaacaatatttccgatatcatatattttccacat-aatatatgtagctcaaattaaccaacaa 18391038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 6478110 - 6478034
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   |||||||||||||| ||||||||||||||    
T  6478110 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatccattttccacataa 6478034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 22332121 - 22332161
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactctt 315  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22332121 aaaccaagttagattcatcacaacataggttaaatactctt 22332161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 9784966 - 9785029
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| |||||| |||||||||| | |||||||||| ||||||    
T  9784966 caacaaagatattcacgtccgaccaaattagattcatcacaacacatgttaaatactgttaaac 9785029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 20915375 - 20915429
Alignment:
Q  131 taaccaacaacattaattat--taataacatcatataacatcatagttatcaaca 183  Q
    |||| |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  20915375 taactaacaacattaatcatcttaataacatcatataacatcatagttatcaaca 20915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 24841356 - 24841399
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  24841356 aaaccaagttagatcccttacaacataggttaaatactcttaaa 24841399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 29113764 - 29113809
Alignment:
Q  274 caaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||    
T  29113764 caaacaaagttagaccaatcacaacataggttaaatactcttaaac 29113809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 25140214 - 25140257
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  25140214 acattaatcattaataacatcacataacatcatagttattaaca 25140257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 22689956 - 22690005
Alignment:
Q  136 aacaacattaattatt--aataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||    
T  22689956 aacaacattaatcattttaataacatcatataacatcattgttatcaaca 22690005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 22694552 - 22694601
Alignment:
Q  136 aacaacattaattatt--aataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||    
T  22694552 aacaacattaatcattttaataacatcatataacatcattgttatcaaca 22694601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 3538981 - 3539084
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || ||| || || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  3538981 caacataacaacatcaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 3539078  T
Q  137 acaaca 142  Q
    ||||||    
T  3539079 acaaca 3539084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 18389109 - 18389040
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| |||  |||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  18389109 caacatagcaacatcgataataacaacttgaatgatataaacaataataatttccatatcatacattttc 18389040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 10744463 - 10744423
Alignment:
Q  143 ttaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  10744463 ttaatcattaataacaacatatcacatcatagttatcaaca 10744423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 20261154 - 20261198
Alignment:
Q  96 catacattttccacataa-atatatgtatttcacattaaccaaca 139  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  20261154 catatattttccacataatatatatatatttcacattaaccaaca 20261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 5547 - 5434
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5547 agcagagacaacaacatacaacaacttcacaacatagcaacattaataataacaacttgaatggtataacaacattattttctatatcatactttttcca 5448  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  5447 cataaatatatgta 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5381 - 5318
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  5381 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagtttaaatactcttaaac 5318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 57969 - 58079
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  57969 agagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 58068  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  58069 aaatatatgta 58079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 58132 - 58195
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  58132 caacaaagatattcacgtcaaaccaaattagattcatcacaacacaggttaaatactcttaaac 58195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 255 - 142
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  255 agcagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttcca 156  T
Q  109 cataaatatatgta 122  Q
    || || ||||||||    
T  155 caaaattatatgta 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 89 - 26
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  89 caacaaagatattaacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 228 - 118
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  228 agagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttaaatggtataacaacattattttctatatcataccttttccacat 129  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  128 aaatatatgta 118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 63 - 2
Alignment:
Q  258 acaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  63 acaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatacccttaaac 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 13368 - 13255
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  13368 agcagagacaataacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttcca 13269  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  13268 cataaatatatgta 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 19635 - 19522
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  19635 agcagagacaagaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttcca 19536  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  19535 cataaatatatgta 19522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13204 - 13141
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13204 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 13141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 19471 - 19408
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19471 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 19408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 47399 - 47290
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  47399 agagacaacaacatacaacaacttcacaacatagcatcattaattataacaacttgaatggtataacaacatt-ttttctatatcataccttttccacat 47301  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  47300 aaatatatgta 47290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 28532 - 28628
Alignment:
Q  49 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28532 cattaataataacaacttgaatgatataacaacattagtttctgtatcatacatttt-cacat-aatatatgtatttcacattaaccaacaacattaat 28628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 9567 - 9457
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaa 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||     
T  9567 ttcacaacatagcatcattaataataacaacttgaaaggtataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 9468  T
Q  134 ccaacaacatt 144  Q
     ||||||||||    
T  9467 tcaacaacatt 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 9429 - 9397
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagat 288  Q
    |||||||||||||||||||||||||| ||||||    
T  9429 caacaaagatattcacgtcaaaccaaattagat 9397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 19920852 - 19920965
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||||| || || ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  19920852 agcagagacagcaacacacaacaacttcacaacatatcatcattaataataataacttgaatggtataacaacattattttctatatcatagtttttcca 19920951  T
Q  109 cataaatatatgta 122  Q
    ||||||||||||||    
T  19920952 cataaatatatgta 19920965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 37 - 163
Target Start/End: Complemental strand, 23200368 - 23200244
Alignment:
Q  37 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||| ||| || ||||||| |||||||| |||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||    
T  23200368 acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctataacataccttttc-acataa-tatatgtatttcacattaacca 23200271  T
Q  137 acaacattaattattaataacatcata 163  Q
    ||||||||||| |||||||||||||||    
T  23200270 acaacattaatcattaataacatcata 23200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 30611937 - 30612000
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30611937 caacaaagatattcacgtcacaccaagttagatccatcacaacataggttaaatactcttaaac 30612000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 16605267 - 16605208
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16605267 aaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 16605208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 19921018 - 19921081
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  19921018 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactcttaaac 19921081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 30613897 - 30613960
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  30613897 caacaaagatattcacgtcacaccaagttagattcatcacaacataggttaaatactcttaaac 30613960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 20198256 - 20198196
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctta 316  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  20198256 caacaaagatattcacgtcaaaccaaattagatccatcaaaacataggttaaatactctta 20198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 22110987 - 22111047
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22110987 caaagatattcacgtcaaaccaagttatattcatcacaacataggttaaatactcttaaac 22111047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 18744038 - 18744097
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  18744038 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactcttaaac 18744097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 20565938 - 20566001
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  20565938 caacatagatattcacatcaaaccaaattagatccatcacaacataggttaaatactcttaaac 20566001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 23200057 - 23199998
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 315  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23200057 caacaacgatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactctt 23199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 32607992 - 32607930
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  32607992 caacaaagatattcacgtcaagccaa-ttagatccatcacaacataggttaaatactcttaaac 32607930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 36509444 - 36509382
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36509444 caacaaaaatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 36509382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 1628041 - 1627985
Alignment:
Q  263 gatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1628041 gatattcacgtcaaaccaatttagattcatcacaacataggttaaatactcttaaac 1627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 24277416 - 24277340
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||    
T  24277416 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24277340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 24384797 - 24384873
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||    
T  24384797 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 14026471 - 14026412
Alignment:
Q  260 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  14026471 aaagatattcacgtcaaaccaagatagattcattacaacataggttaaatactcttaaac 14026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 21399671 - 21399608
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| |||||| |||||||| |||||||||||||||||||||    
T  21399671 caacaaagatattcacgtctaaccaaattagattcatcacaaaataggttaaatactcttaaac 21399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 33895550 - 33895487
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||    
T  33895550 caacaaagatattcacatcaaaccaaattagatccatcaccgcataggttaaatactcttaaac 33895487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 25250725 - 25250632
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 106  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||    
T  25250725 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25250632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 25314510 - 25314417
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 106  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||    
T  25314510 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25314417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 21406521 - 21406431
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataca 101  Q
    |||||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  21406521 agcagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttgtatatcataca 21406431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 22357747 - 22357656
Alignment:
Q  59 aacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||||    
T  22357747 aacaacttgaatgatataaacaacaacattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaattat 22357656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 8952860 - 8952750
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||   |||||| ||  | | ||||||||    
T  8952860 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccaca---atatatatagcttaaattaacca 8952764  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  8952763 acaacatcaattat 8952750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 20469884 - 20469827
Alignment:
Q  89 tctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  20469884 tctatatcatacaatttccacataa-tatatgtatctcaaattaaccaacaacattaat 20469827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 32608164 - 32608084
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtat 123  Q
    ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| | | ||||| |||||||||||    
T  32608164 catagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatattcacat-aatatatgtat 32608084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 17812638 - 17812714
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  17812638 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 17812714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 10953214 - 10953283
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| || |||||||||||||||||||| ||||| | || |||| |||||||||||||||    
T  10953214 caacatagcaacatcaacaataacaacttgaatggtataaacaataataatttccatatcatacattttc 10953283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 16062904 - 16062933
Alignment:
Q  290 catcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||||||    
T  16062904 catcacaacataggttaaatactcttaaac 16062933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 37805163 - 37805118
Alignment:
Q  95 tcatacattttccacataa-atatatgtatttcacattaaccaaca 139  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  37805163 tcatatattttccacataatatatatatatttcacattaaccaaca 37805118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 10035 - 9947
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10035 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgta 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 9894 - 9831
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  9894 caacaaagatattcacgtcaaaccaaattagatccatcacaatataggttaaatactcttaaac 9831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 386 - 496
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 111  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||    
T  386 agagacaacaacgtacaacaacttcacaacatatcatcattaataataacaacttgaatggtataaaaacgttattttctatatcataccttttccatat 485  T
Q  112 aaatatatgta 122  Q
    |||||||||||    
T  486 aaatatatgta 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 549 - 612
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  549 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 9106 - 9024
Alignment:
Q  40 acatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9106 acatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacataaatatatgta 9024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 8970 - 8908
Alignment:
Q  257 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||    
T  8970 aacaaagatattcacgtcaaaccaaattagatccatcacattatagtttaaatactcttaaac 8908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 8195 - 8106
Alignment:
Q  34 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcata-cattttccacataaatatatgta 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  8195 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacctttttccacataaatatatgta 8106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 8053 - 7990
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8053 caacaaagatgttcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 7990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 34201 - 34089
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  34201 caacatagcaacattaataataacaacttgaatgatataaacaacaatatcttctatatcatacattttccacat-aatatatgtaactcaaattaacca 34103  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  34102 acaacatcaattat 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 23618 - 23711
Alignment:
Q  13 gagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 106  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  23618 gagacaacaacatacaacaatttcacaacatagcatcattaatgataacaacttaaatggtataacaacattattttctacatcataccttttc 23711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 22442 - 22505
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  22442 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactcttaaac 22505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 22322 - 22409
Alignment:
Q  53 aataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  22322 aataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 22409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 1135 - 1072
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1135 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 39483 - 39546
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39483 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 39546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 773 - 892
Alignment:
Q  37 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||| ||||||||| |||| |||| ||| |||||||||||||||||||||| |      ||| ||||||| ||||||||||||||||||||||    
T  773 acaacatagcagcattaataacaacatcttggatgatataacaacattattttctatacc------ttttcacataa-tatatgtatttcacattaacca 865  T
Q  137 acaacattaattattaataacatcata 163  Q
    |||| |||||| |||||||||||||||    
T  866 acaagattaatcattaataacatcata 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 15254 - 15191
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15254 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 15191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 24312 - 24249
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24312 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactcttaaac 24249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 127254 - 127119
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    ||||||||||||| |||| | || |||  |||||||||| | ||||||| ||||||||| ||| ||||| ||||||||||||  |||||||| ||| |||    
T  127254 agcagagacaacaacataaaacagcttg-caacatagcaactttaataacaacaacttggatgatataataacattattttccctatcataccttt-cca 127157  T
Q  109 cataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  127156 cataa-tatatgtatttcacattaaccaacaacattaat 127119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 6862 - 6974
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    |||||||||| |||||||||||||||||  |||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  6862 caacatagcaacattaataataacaactcaaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttaaattaacca 6960  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  6961 acaacatcaattat 6974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 62638 - 62581
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  62638 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 62581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 117054 - 117010
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||    
T  117054 aaaccaagttagatccaacaagacataggtttaatactcttaaac 117010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 66700 - 66639
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  66700 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactcttaa 66639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 59585 - 59697
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataacaa-cattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || | ||||||||||||||| ||||| ||||| || || |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  59585 caacataacaacgttaataataacaactcgaatgatataaaaaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 59683  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  59684 acaacatcaattat 59697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 109458 - 109515
Alignment:
Q  89 tctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||| |||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  109458 tctacatcatacaatttccacataa-tatatgtatctcaaattaaccaacaacattaat 109515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 16325 - 16385
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16325 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 16385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 2088 - 2013
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 112  Q
    ||||||||||  |||||||||||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  2088 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 2013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 589 - 652
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  589 caacaaagatattcacgtcaaaccaaattagatccatcacaaaataggttaaatactcttaaac 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 468 - 561
Alignment:
Q  49 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacatt 144  Q
    ||||||||||||| ||||| |||||||||||| |||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||||    
T  468 cattaataataaccacttggatggtataacaatatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaacatt 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 1095 - 1158
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1095 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatacacttaaac 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 100 - 143
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  100 acattaatcattaataacatcatatcacatcatagttatcaaca 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 36184 - 36121
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  36184 caacaaagatattcacgtcaaacaaagttagattcatcacaacataggttaaatactcttaaac 36121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 187173 - 187110
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  187173 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatacacttaaac 187110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 188132 - 188089
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  188132 acattaatcattaataacatcatatcacatcatagttatcaaca 188089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 16638 - 16584
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16638 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 12014 - 11953
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12014 caacaaagatattcatgtcaaaccaagttagatccatcaaaacataggttaaatactcttaa 11953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 7904 - 7964
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  7904 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatactcttaaac 7964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 444 - 578
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccaca 110  Q
    |||||||||| |||| | |||||| ||||| ||||| ||| ||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||||||    
T  444 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 542  T
Q  111 taaatatatgtatttcacattaaccaacaacattaat 147  Q
    | ||||||||||  ||| ||| |||||||||||||||    
T  543 t-aatatatgtagctcaaatttaccaacaacattaat 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 8699 - 8833
Alignment:
Q  12 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccaca 110  Q
    |||||||||| |||| | |||||| ||||| ||||| ||| ||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||||||    
T  8699 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 8797  T
Q  111 taaatatatgtatttcacattaaccaacaacattaat 147  Q
    | ||||||||||  ||| ||| |||||||||||||||    
T  8798 t-aatatatgtagctcaaatttaccaacaacattaat 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 5104 - 5164
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5104 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatactcttaaac 5164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 1951 - 2010
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaa 318  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  1951 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatacccttaaa 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 7446 - 7386
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  7446 caaagatattcacgtcaaaccaagttatattcatcacaacataggttaaatactcttaaac 7386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 5657 - 5726
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||  ||| ||||| | || ||||||||||||||||||||    
T  5657 caacatagcaacatcaataataacaacttgaattatataaacaataataatttctatatcatacattttc 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 9e-21; HSPs: 4)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 3803 - 3866
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  3803 caacaaagatattcacgtcaaacgaaattagatccatcacaacataggttaaatactctaaaac 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 11547 - 11606
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  11547 caaagatatttacgtcaaaccaa-ttagatccatcacaacataggtcaaatactcttaaac 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 11381 - 11491
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||| |||||||| |||||| |||||| | | ||||||| ||||||||||||| | ||| ||||||||||||||||| ||||||||||||||| | | ||    
T  11381 agcacagacaacaacatacaacaacttga-accatagcaacattaataataaccatttggatggtataacaacatta-tttctatatcatacaatattca 11478  T
Q  109 cataaatatatgta 122  Q
    ||| ||||||||||    
T  11479 cat-aatatatgta 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 3718 - 3808
Alignment:
Q  49 cattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||||||| |||| |||||||    
T  3718 cattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatttcaaattatccaacaa 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 10095 - 10158
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  10095 caacaaagatattcatgtcaaaccaagttagatccaccacaacataggttaaatactctcaaac 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 3181 - 3126
Alignment:
Q  264 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3181 atattcacgtcaaaccaagttagattcatcacaacataggttaaatactcttaaac 3126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 18794 - 18735
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 315  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18794 caacaaagatatttacgttaaaccaagttagatccatcacaacataggttaaatactctt 18735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 27684 - 27747
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  27684 caacaaagatattcacgtcaaaccaaattggatccatcacaacatagattaaatactcttaaac 27747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 7604 - 7666
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  7604 caacaaagatattcacatcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 7666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 14235 - 14297
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14235 caacaaagatattcacatcaaaccaa-ttagatccatcacaacataggttaaatactcttaaac 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 146117 - 146179
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  146117 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacatagattaaatactcttaaac 146179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 145987 - 146084
Alignment:
Q  43 tagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||| ||||||||    
T  145987 tagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattaatcaacaaca 146084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 29542 - 29605
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  29542 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactcttaaac 29605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 325 - 464
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||    
T  325 agcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttcc 422  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    |||| ||||||| ||  | | ||||||||||||||| ||||||    
T  423 acat-aatatatatagcttaaattaaccaacaacatcaattat 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 3250 - 3389
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| || |||||  ||||||||||  ||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  3250 agcagagacaacaacataaac-aacttg-caacatagcaatattaacaataacaacttgaatgttataaacaacgatattttctatatcatacattttcc 3347  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    |||| ||||||||||  | | ||||||||||||| | ||||||    
T  3348 acat-aatatatgtagcttaaattaaccaacaacgtcaattat 3389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 10891 - 11030
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| || |||||  |||||||| | ||||||||||||||||||||||| ||| || |||| |||  | |||||||||||||||||    
T  10891 agcagagacaacaacatagac-aacttg-caacatagaaacattaataataacaacttgaatgatataaagaacaatatcatatatatcatacattttcc 10988  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    |||| ||||||||||  ||| ||||||||||||||| ||||||    
T  10989 acat-aatatatgtaactcaaattaaccaacaacatcaattat 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 6121 - 6260
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| || |||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||    
T  6121 agcagagacaacaacataaac-aacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcc 6218  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    ||||||| |||| ||  | | ||||||||||||||| ||||||    
T  6219 acataaa-atatatagcttaaattaaccaacaacatcaattat 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 8273 - 8412
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| || |||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||    
T  8273 agcagagacaacaacataaac-aacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcc 8370  T
Q  108 acataaatatatgtatttcacattaaccaacaacattaattat 150  Q
    ||||||| |||| ||  | | ||||||||||||||| ||||||    
T  8371 acataaa-atatatagcttaaattaaccaacaacatcaattat 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 127589 - 127496
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||||||| ||||    
T  127589 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaattaaccaacaacaataat 127496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 1475 - 1532
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1475 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatactcttaaac 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 7518 - 7458
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  7518 caaagatattcacgtcaaaccaagttagattcatcacaacttaggttaaatacttttaaac 7458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 34652 - 34712
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  34652 caaagatactcacgtcaaaccaagatagattcatcacaacataggttaaatactcttaaac 34712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 1291 - 1354
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1291 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactcttaaac 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 11179 - 11242
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  11179 caacaaagctattcacgtcaaaccaaattagattcatcacaacataggttagatactcttaaac 11242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 7198 - 7326
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||| | | ||||    
T  7198 cagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttccatatcatacaatattcaca 7295  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||| ||||||| ||| ||||  ||||||||    
T  7296 t-aatttatgtatctcaaattattcaacaaca 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 7359 - 7422
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||||  ||||||||||||    
T  7359 caacaaagatattcacgtcagaccaaattagattcatcacagcataggtttgatactcttaaac 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 11047 - 11146
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    ||||||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||| | | ||||| ||||||||||| ||| ||||  ||||||    
T  11047 catagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatattcacat-aatatatgtatctcaaattattcaacaa 11144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 13333 - 13270
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  13333 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 13270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 6897 - 6960
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  6897 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 29996 - 30059
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||    
T  29996 caacaaagatattcacgtcaaaccaaattagattcatcacaacataagttagatactcttaaac 30059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 645 - 582
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  645 caacaaagctattcacgtcaaaccaaattagattcatcacaacataggttagatactcttaaac 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5948 - 5885
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||||  ||||||||||||    
T  5948 caacaaagatattcacgtcagaccaaattagattcatcacagcataggtttgatactcttaaac 5885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 6109 - 5981
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||| | | ||||    
T  6109 cagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttccatatcatacaatattcaca 6012  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||| ||||||| ||| ||||  ||||||||    
T  6011 t-aatttatgtatctcaaattattcaacaaca 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 777 - 678
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 140  Q
    ||||||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||| | | ||||| ||||||||||| ||| ||||  ||||||    
T  777 catagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatattcacat-aatatatgtatctcaaattattcaacaa 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 773 - 645
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||| | || |||| | ||||||| |||||||||| | |||||||  |||||||| ||| |||||||||||||||||||||||||||| |||| ||    
T  773 agcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcatacctttt-ca 676  T
Q  109 cataaatatatgtatttcacattaaccaacaa 140  Q
    ||| ||||||||||| ||| |||| |||||||    
T  675 cat-aatatatgtatctcaaattatccaacaa 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 6077 - 5949
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 108  Q
    |||||||| | || |||| | ||||||| |||||||||| | |||||||  |||||||| ||| |||||||||||||||||||||||||||| |||| ||    
T  6077 agcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcatacctttt-ca 5980  T
Q  109 cataaatatatgtatttcacattaaccaacaa 140  Q
    ||| ||||||||||| ||| |||| |||||||    
T  5979 cat-aatatatgtatctcaaattatccaacaa 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 650 - 587
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||||||    
T  650 caacaaagatactcacgtcaaaccaaattaggtccatcacaacatagattaaattctcttaaac 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5954 - 5891
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||||||    
T  5954 caacaaagatactcacgtcaaaccaaattaggtccatcacaacatagattaaattctcttaaac 5891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 33573 - 33701
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||    
T  33573 cagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcaca 33670  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||||||||||| ||| ||||  ||||||||    
T  33671 t-aatatatgtatctcaaattattcaacaaca 33701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 33734 - 33776
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaac 298  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  33734 caacaaagatattcacgtcaaaccaaattagatccatcacaac 33776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 78449 - 78507
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 315  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  78449 caacaaagatattcacgtcaaaccaa-ttagattcatcacaacataggttaaatactctt 78507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 78322 - 78413
Alignment:
Q  49 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  78322 cattaataataaccacttggatggtataacaacatta-tttctataccatacaatattcacat-aatatatgtatctcaaattattcaacaaca 78413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 10597 - 10535
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  10597 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacgtaggttaaatactcataaac 10535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 10746 - 10695
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataac 61  Q
    ||||||||||||| |||||| |||||||| | ||||||| |||||||||||||    
T  10746 agcagagacaacaacatacaacaacttca-atcatagcaacattaataataac 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 120294 - 120357
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  120294 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactcttaaac 120357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 168821 - 168884
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  168821 caacaaagatattcacgtcaaaccaaattagaaccatcacaacataagttaaatactctaaaac 168884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 142997 - 143060
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  142997 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactcttaaac 143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 25900 - 25963
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||||    
T  25900 caacaaagatatttacataaaaccaaattagatccatcacaacataggttaaatactcttaaac 25963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 5039 - 5143
Alignment:
Q  9 agcagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttcc 107  Q
    ||||||||||||| |||| | ||||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||    
T  5039 agcagagacaacaacata-agcaacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttcc 5136  T
Q  108 acataaa 114  Q
    |||||||    
T  5137 acataaa 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 66253 - 66361
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || |||||||||||||||||| |||| ||| ||||||| || ||||||||||||||| |||||||||  |||||||||| ||| ||||||||    
T  66253 caacataacaacattaataataacaactttaatgatatgaacaacaata-tttctatatcatacaatttccacat-catatatgtatctcaaattaacca 66350  T
Q  137 acaacattaat 147  Q
    |||||| ||||    
T  66351 acaacaataat 66361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 447 - 335
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || ||||||||||||||||||| |||||||| |||| ||  | | ||||||||    
T  447 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacatttttcacataaa-atatatagcttaaattaacca 349  T
Q  137 acaacattaattat 150  Q
    ||||||| ||||||    
T  348 acaacatcaattat 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 29030 - 28973
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  29030 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatacttttaaac 28973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 9445 - 9502
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  9445 agatattcacgtcaaaccaaattagattcatcacaacataggttaaataatcttaaac 9502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 41023 - 40923
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 148  Q
    |||||||||||||||||||||| ||||| ||||  || |||||||||||||||||||||||||||| |||| ||  | | ||||||||||||||| ||||    
T  41023 attaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataaa-atatatagcttaaattaaccaacaacatcaatt 40925  T
Q  149 at 150  Q
    ||    
T  40924 at 40923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 21123 - 21180
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  21123 agatattcacgtcaaaccaaattagactcatcacaacataggttaaatactcttaaac 21180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 18552 - 18612
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||    
T  18552 caaagatattcacgtcaaaccgagatagattcatcacaacatatgttaaatactcttaaac 18612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 8311 - 8375
Alignment:
Q  50 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||    
T  8311 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 8375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 15338 - 15210
Alignment:
Q  11 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 110  Q
    |||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| | | ||||    
T  15338 cagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaaaacatta-tttctatatcatacaatattcaca 15241  T
Q  111 taaatatatgtatttcacattaaccaacaaca 142  Q
    | ||||||||||| ||| ||||  ||||||||    
T  15240 t-aatatatgtatctcaaattattcaacaaca 15210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 21452 - 21515
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| | |||||||||||||||||    
T  21452 caacaaagatattcacgtccaaccaaattagatccattacaacacatgttaaatactcttaaac 21515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 21036 - 21099
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||| ||||||    
T  21036 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactattaaac 21099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 7523 - 7573
Alignment:
Q  262 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 312  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  7523 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatact 7573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 1268 - 1327
Alignment:
Q  41 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcataca 101  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  1268 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcataca 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 1613 - 1549
Alignment:
Q  50 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||||||||    
T  1613 attaataataacaacttgaatgataataacaacgatattttctatatcaaacattttccacataa 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 2960 - 3024
Alignment:
Q  50 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||| |||||    
T  2960 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 2800 - 2724
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  ||||| |||||||||||||||| ||||| |||   ||||||||||||||||||||||||||||||    
T  2800 caacatagcaatattaaaaataacaacttgaatgatataaacaatgatattttctatatcatacattttccacataa 2724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 6053 - 6117
Alignment:
Q  50 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 113  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||||||||    
T  6053 attaataataacaacttgaatgataataacaacgatattttctatatcacacattttccacataa 6117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 7257 - 7194
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| | ||||||| ||||||||||||| || ||||||||||||||||||||    
T  7257 caacaaggatattcacatgaaaccaaattagatccatcaccacgtaggttaaatactcttaaac 7194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 5994 - 5931
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | |||||||||| ||||||    
T  5994 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatactgttaaac 5931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 2502 - 2439
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  2502 caacaaggatattcacatcaaaccaaattagatccatcaccatttaggttaaatactcttaaac 2439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 2727 - 2633
Alignment:
Q  54 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttc-acattaaccaacaacattaat 147  Q
    |||||||| | ||||||| ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| || | ||||||||||| |||||||    
T  2727 ataataacgatttgaatgatatgaacaacaatattttctatatcatacaatttccacat-aatatatgtatctcaaaattaaccaacatcattaat 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 945 - 991
Alignment:
Q  137 acaacattaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  945 acaacattaatcatcaataacatcatataacatcatagttatcaaca 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 8304 - 8373
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  8304 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 8373  T

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Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 20889 - 20958
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  20889 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 20958  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 3120 - 3232
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||| ||| ||||||| ||  | | ||||||||    
T  3120 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccccat-aatatatatagcttaaattaacca 3218  T
Q  137 acaacattaattat 150  Q
    ||| ||| ||||||    
T  3219 acatcatcaattat 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 49243 - 49284
Alignment:
Q  259 caaagatattcacgtcaaaccaagttagatccatcacaacat 300  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  49243 caaagatattcacgtcaaaccaagttagattcatcacaacat 49284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 40231 - 40272
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaa 181  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  40231 acattaatcattaataacatcatataacatcatagttatcaa 40272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 126140 - 126195
Alignment:
Q  264 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| || |||||| ||||||||||||||||| | |||||||||||||||||    
T  126140 atattcacatccaaccaaattagatccatcacaacacatgttaaatactcttaaac 126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 1340 - 1272
Alignment:
Q  37 acaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 104  Q
    |||||||||||  |||||||||||||||||||||| ||| ||||||  |||||| ||||||||||||||    
T  1340 acaacatagcaatattaataataacaacttgaatgatataaacaacgatattttatatatcatacattt 1272  T

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Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 7175 - 7115
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctta 316  Q
    ||||||||||||||| ||||| |||| | ||||  ||||||||||||||||||||||||||    
T  7175 caacaaagatattcatgtcaatccaaatgagatttatcacaacataggttaaatactctta 7115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 53446 - 53378
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 106  Q
    |||||||||| ||| ||||||||||||||||||| ||||| || | || |||| |||||||||||||||    
T  53446 caacatagcaacatcaataataacaacttgaatgatataaaaataataatttccatatcatacattttc 53378  T

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Target: scaffold0232 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 3654 - 3717
Alignment:
Q  256 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | |||||||| | ||||||    
T  3654 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatattgttaaac 3717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 16004 - 16071
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 104  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||    
T  16004 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattt 16071  T

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Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 13186 - 13253
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 104  Q
    |||||||| | ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||    
T  13186 caacatagaaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattt 13253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 136416 - 136319
Alignment:
Q  49 cattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    ||||||||| ||||||||||||| ||| ||||||| ||||| |||||||||||| ||| ||||| ||||||||||| ||| |||| ||||| ||| ||||    
T  136416 cattaataacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaattttcacat-aatatatgtatctcaaattatccaactacaataat 136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 12320 - 12244
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||||||||||||| ||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  12320 caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcacacatttccctcataa 12244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 95542 - 95636
Alignment:
Q  53 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 147  Q
    |||||||||| |||||||| ||||| ||| | || |||||||||||  ||| |||||||||| |||| ||||||||||||||  ||||||||||||    
T  95542 aataataacatcttgaatgatataagcaataataatttctatatcaaccatcttccacataa-tataagtatttcacattaagtaacaacattaat 95636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 7995 - 7953
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaa 317  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  7995 aaaccaagttagatccaccacaacagaggttaaatactcttaa 7953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 19456 - 19387
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 106  Q
    |||||||| | ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  19456 caacatagaaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 19387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 857 - 901
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||||||||| | |||||||||||||| |||||||    
T  857 aaaccaagttagatccatcatatcataggttaaatacccttaaac 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 712 - 672
Alignment:
Q  143 ttaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  712 ttaatcattaataacatcatatcacatcatagttatcaaca 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 20723 - 20683
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactctt 315  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  20723 aaaccaagtcagatccatcacaacattggttaaatactctt 20683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 22432 - 22396
Alignment:
Q  283 ttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22432 ttagatccttcacaacataggttaaatactcttaaac 22396  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 66482 - 66442
Alignment:
Q  143 ttaattattaataacatcatataacatcatagttatcaaca 183  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  66482 ttaatcattaataacatcatatcacatcatagttatcaaca 66442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 700 - 657
Alignment:
Q  140 acattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  700 acattaatcattaataacatcacataacatcatagttattaaca 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 3898 - 3793
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || |||||| || |||||| |||||| ||| ||||||| ||||| |||||||||| ||| | ||||||| ||||||||| ||| |||| |||    
T  3898 caacataacaacattaacaacaacaacctgaatgatatgaacaacaatattt-ctatatcatatattattcacataa-tatatgtatctcaaattatcca 3801  T
Q  137 acaacatt 144  Q
    ||||||||    
T  3800 acaacatt 3793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 4346 - 4304
Alignment:
Q  141 cattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  4346 cattaattatgaacaacatcatataacatcatatttatcaaca 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 8906 - 8864
Alignment:
Q  141 cattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  8906 cattaattatgaacaacatcatataacatcatatttatcaaca 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 16846 - 16954
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 136  Q
    ||||||| || ||||||||| |||||||| |||| ||| ||||| | ||||| |||||||| ||| ||| ||||||| ||||||||| ||| |||| |||    
T  16846 caacataacaacattaataacaacaacttaaatgatatgaacaagaatattt-ctatatcaaacaattttcacataa-tatatgtatctcaaattatcca 16943  T
Q  137 acaacattaat 147  Q
    |||||| ||||    
T  16944 acaacaataat 16954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 18565 - 18523
Alignment:
Q  141 cattaattattaataacatcatataacatcatagttatcaaca 183  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  18565 cattaattatgaacaacatcatataacatcatatttatcaaca 18523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 24846 - 24797
Alignment:
Q  136 aacaacattaattat--taataacatcatataacatcatagttatcaaca 183  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||||||||    
T  24846 aacaacattaatcatcttaataacatcgtataacatcatagttatcaaca 24797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 625 - 707
Alignment:
Q  59 aacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 142  Q
    ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||||||||    
T  625 aacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatccaacaaca 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 3755 - 3679
Alignment:
Q  38 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 113  Q
    ||||||||||  |||| |||||||||||| |||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  3755 caacatagcaatattagtaataacaacttaaatgatataaacaacgatattttctatatcacacatttccctcataa 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 598 - 570
Alignment:
Q  155 aacatcatataacatcatagttatcaaca 183  Q
    |||||||||||||||||||||||||||||    
T  598 aacatcatataacatcatagttatcaaca 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 1713 - 1749
Alignment:
Q  24 atacaccaacttcacaacatagcatcattaataataa 60  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  1713 atacaacaacttaacaacatagcatcattaataataa 1749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 35586 - 35542
Alignment:
Q  275 aaaccaagttagatccatcacaacataggttaaatactcttaaac 319  Q
    |||||||||||||| || || ||||||||||||||||| ||||||    
T  35586 aaaccaagttagattcaacaaaacataggttaaatactgttaaac 35542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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