View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10940_low_12 (Length: 285)
Name: NF10940_low_12
Description: NF10940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10940_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 8660775 - 8660526
Alignment:
| Q |
18 |
aacaacaatatgatcaaacaaactactacaagacacaagaagtgaaaaactataattaatttttgaactcctatgacatttttctggatcagcatgggaa |
117 |
Q |
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| T |
8660775 |
aacaacaatatgatcaaacaaactactacaagacacaagaagtgaaaaactataattaatttttgaactactatgacatttttctggatcagcatgggaa |
8660676 |
T |
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| Q |
118 |
tactcatttgccaactagcaatgtcatagagcatctgtagctttctgaaattgttaaacaagacatacttttccctttctaattaatgggtaatggacaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8660675 |
tactcatttgccaactagcaatgtcatagagcatctgtagctttctgaaattgttaaacaagacatacttttccctttctaattaatgggtaatggacaa |
8660576 |
T |
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| Q |
218 |
taattatattattaattgcacaaacttgtgtaagataaaggtgaacaaga |
267 |
Q |
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| T |
8660575 |
taattatattattaattgcacaaacttgtgtaagataaaggtgaacaaga |
8660526 |
T |
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