View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10941_high_3 (Length: 337)
Name: NF10941_high_3
Description: NF10941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10941_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 6390261 - 6390575
Alignment:
| Q |
10 |
gcacagacaatgaatataatgtttgtctcacgagtcttttttgaaagaaagttgcagatactattgagcattatttgatatcctggaaccggcaagaata |
109 |
Q |
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| T |
6390261 |
gcacggacaatgaatataatgtttgtctcacgagtcttttttgaaagaaagttgcagatactattgagcattatttgatatcctggaaccggcaagaata |
6390360 |
T |
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| Q |
110 |
cataagcacttacatcggcagtggaatttgaactcaaaactttataggatgtgagctgaatccttaccaattcaattaaacctaagttggcatacaaatt |
209 |
Q |
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| T |
6390361 |
cataagcacttacatcggcagtggaatttgaactcaaaactttataggatgtgagctgaatccttaccaattcgattaaacctaagttggcatacaaaat |
6390460 |
T |
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| Q |
210 |
ggtatttagcaacgaaaatagcaagtaataagtgataataagttatgattgatgtattaattgtgcaaaagatgaaagtggggttgtggcagtgtactgt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6390461 |
ggtatttagcaacgaaaatagcaagtaataagtgataataagttatgattgatgtattaattgtgcaaaagatgaaagtggggttgtggcagtgtactgt |
6390560 |
T |
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| Q |
310 |
tgtttcttatggttg |
324 |
Q |
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||||||||||||||| |
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| T |
6390561 |
tgtttcttatggttg |
6390575 |
T |
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