View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10942_high_16 (Length: 368)
Name: NF10942_high_16
Description: NF10942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10942_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 34642782 - 34642431
Alignment:
| Q |
1 |
tcattaaacgttttaattgtttttaggctcaagaattgcaacattggtcttccttccatttctgatttcttgaacaagtgtctatctatatatatgttta |
100 |
Q |
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| T |
34642782 |
tcattaaacgttttaattgtttttaggctcaagaattgcaacattggtcttccttccatttttgatttcttgaacaagtgtctatctatatatatgttta |
34642683 |
T |
|
| Q |
101 |
agaccaagctttattctcattttagcttttaggtgagatttgttgatgggagtagaatgcaatgtgaaaatgggtcaagtaataaaccgtcattggaaaa |
200 |
Q |
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| T |
34642682 |
agacaaagctttattctcattttagcttttaggtgagatgtgttgatgggagtagaatgtaatgtgaaaatgggtcaagtaataaaccgtcattggaaaa |
34642583 |
T |
|
| Q |
201 |
tttgataccatagttggttcgacccgttgaattgagaacttgtcaggatgaatcacatcaaacta-gattgaacgatttggattacgatttaacagattt |
299 |
Q |
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| T |
34642582 |
tttgatatcatagttggtttgatccgttgaatcgtgaacttgtcagggtgaatcacatcaaattagggttgaatggtttgaattacggtttaacaggttt |
34642483 |
T |
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| Q |
300 |
gtttggttcgccgtataatatccgctctattttttaaaacattggttctaat |
351 |
Q |
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| T |
34642482 |
gtttggttcgccgtatagtatccgctctattttttaaaacattgcttctaat |
34642431 |
T |
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