View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10942_low_20 (Length: 332)

Name: NF10942_low_20
Description: NF10942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10942_low_20
NF10942_low_20
[»] chr3 (21 HSPs)
chr3 (1-327)||(12033395-12033721)
chr3 (1-327)||(14865624-14865951)
chr3 (1-327)||(17131510-17131837)
chr3 (44-327)||(19235020-19235301)
chr3 (1-324)||(13302195-13302515)
chr3 (1-324)||(13312851-13313171)
chr3 (1-282)||(13323782-13324063)
chr3 (222-327)||(23370455-23370560)
chr3 (1-291)||(51301372-51301658)
chr3 (218-291)||(10389429-10389502)
chr3 (218-291)||(10414518-10414591)
chr3 (218-291)||(10421188-10421261)
chr3 (225-318)||(24933787-24933880)
chr3 (138-276)||(17240513-17240652)
chr3 (222-276)||(9534328-9534382)
chr3 (222-276)||(18929246-18929300)
chr3 (222-274)||(20247791-20247843)
chr3 (222-274)||(24192957-24193009)
chr3 (225-277)||(41455097-41455149)
chr3 (222-277)||(16801467-16801521)
chr3 (222-276)||(14762758-14762812)
[»] chr7 (26 HSPs)
chr7 (1-327)||(20906411-20906736)
chr7 (1-327)||(16090853-16091181)
chr7 (1-327)||(29181058-29181386)
chr7 (1-183)||(2966743-2966926)
chr7 (177-327)||(2971209-2971359)
chr7 (71-288)||(2465212-2465427)
chr7 (218-327)||(14319579-14319688)
chr7 (105-285)||(3857357-3857536)
chr7 (218-327)||(14230777-14230886)
chr7 (1-284)||(21230952-21231236)
chr7 (224-291)||(31155396-31155463)
chr7 (222-327)||(14567204-14567309)
chr7 (222-276)||(11382871-11382925)
chr7 (222-276)||(11389348-11389402)
chr7 (222-277)||(14422985-14423040)
chr7 (222-276)||(16009577-16009631)
chr7 (225-277)||(12590643-12590695)
chr7 (225-277)||(13007435-13007487)
chr7 (222-278)||(20311050-20311106)
chr7 (222-276)||(13679494-13679548)
chr7 (222-276)||(15168176-15168230)
chr7 (225-277)||(12709843-12709895)
chr7 (225-277)||(13122914-13122966)
chr7 (225-277)||(13743712-13743764)
chr7 (222-274)||(16677296-16677348)
chr7 (222-274)||(17651532-17651584)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-327)||(135218-135543)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-327)||(79439-79767)
[»] chr1 (10 HSPs)
chr1 (1-327)||(21710597-21710923)
chr1 (44-327)||(20851082-20851365)
chr1 (44-327)||(20857709-20857992)
chr1 (44-327)||(21706098-21706381)
chr1 (224-318)||(20044910-20045004)
chr1 (1-276)||(19663517-19663794)
chr1 (1-276)||(32651351-32651627)
chr1 (203-276)||(18712780-18712854)
chr1 (222-276)||(20437024-20437078)
chr1 (225-277)||(41112038-41112090)
[»] chr4 (7 HSPs)
chr4 (1-315)||(16146791-16147107)
chr4 (99-284)||(27906142-27906328)
chr4 (163-274)||(14486601-14486713)
chr4 (2-278)||(15407918-15408196)
chr4 (225-291)||(53483708-53483774)
chr4 (222-277)||(11848114-11848169)
chr4 (225-277)||(8045832-8045884)
[»] chr8 (9 HSPs)
chr8 (44-327)||(24320620-24320903)
chr8 (1-276)||(29643386-29643662)
chr8 (1-284)||(14056556-14056839)
chr8 (222-291)||(44477623-44477692)
chr8 (222-291)||(44492781-44492850)
chr8 (191-276)||(18614240-18614327)
chr8 (138-276)||(23482053-23482192)
chr8 (222-274)||(8727735-8727787)
chr8 (225-277)||(23866618-23866670)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-282)||(9115-9396)
[»] chr2 (14 HSPs)
chr2 (44-326)||(25180880-25181162)
chr2 (44-324)||(10399-10679)
chr2 (218-327)||(27207669-27207778)
chr2 (218-327)||(26885179-26885287)
chr2 (99-327)||(23168249-23168480)
chr2 (99-327)||(23579506-23579737)
chr2 (138-276)||(23265058-23265197)
chr2 (138-276)||(23280126-23280265)
chr2 (225-291)||(5706009-5706075)
chr2 (222-276)||(6483718-6483772)
chr2 (222-276)||(6487185-6487239)
chr2 (222-276)||(21908360-21908414)
chr2 (225-277)||(26583830-26583882)
chr2 (259-291)||(27366534-27366566)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-327)||(49919-50248)
[»] chr5 (21 HSPs)
chr5 (44-327)||(19236723-19237005)
chr5 (44-327)||(22460978-22461261)
chr5 (44-327)||(22467602-22467885)
chr5 (46-327)||(20772796-20773072)
chr5 (46-327)||(20781571-20781847)
chr5 (45-327)||(24929880-24930160)
chr5 (99-327)||(28909240-28909466)
chr5 (99-327)||(28945635-28945861)
chr5 (99-327)||(28895992-28896218)
chr5 (99-327)||(28924818-28925044)
chr5 (108-285)||(20820105-20820279)
chr5 (108-285)||(20827205-20827379)
chr5 (99-327)||(28889288-28889514)
chr5 (99-284)||(34829962-34830146)
chr5 (138-276)||(18407944-18408083)
chr5 (1-276)||(23111200-23111476)
chr5 (222-327)||(38144487-38144591)
chr5 (222-278)||(22438746-22438802)
chr5 (222-276)||(19512387-19512441)
chr5 (222-276)||(28370055-28370109)
chr5 (225-277)||(23528634-23528686)
[»] chr6 (27 HSPs)
chr6 (44-327)||(20007897-20008180)
chr6 (44-327)||(9099023-9099304)
chr6 (71-327)||(21364433-21364684)
chr6 (71-327)||(23968415-23968666)
chr6 (224-327)||(11288620-11288721)
chr6 (99-327)||(31252300-31252529)
chr6 (224-291)||(15458492-15458559)
chr6 (224-291)||(15465087-15465154)
chr6 (1-276)||(9187274-9187550)
chr6 (222-284)||(10986173-10986235)
chr6 (222-291)||(34639972-34640041)
chr6 (222-291)||(34646646-34646715)
chr6 (222-277)||(29614146-29614201)
chr6 (222-276)||(4477858-4477912)
chr6 (222-276)||(23839199-23839253)
chr6 (222-284)||(24512836-24512898)
chr6 (249-327)||(28288461-28288537)
chr6 (225-277)||(12168366-12168418)
chr6 (225-277)||(19287275-19287327)
chr6 (225-277)||(19785869-19785921)
chr6 (225-277)||(19878459-19878511)
chr6 (222-277)||(930095-930150)
chr6 (222-277)||(18800438-18800493)
chr6 (44-145)||(29097688-29097789)
chr6 (1-112)||(24513008-24513120)
chr6 (225-277)||(19884235-19884287)
chr6 (259-291)||(24563475-24563507)
[»] scaffold1318 (1 HSPs)
scaffold1318 (138-327)||(1862-2051)
[»] scaffold0131 (1 HSPs)
scaffold0131 (112-327)||(889-1101)
[»] scaffold1469 (1 HSPs)
scaffold1469 (1-291)||(1136-1424)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-327)||(10020-10344)
[»] scaffold0384 (1 HSPs)
scaffold0384 (73-318)||(16023-16266)
[»] scaffold0029 (3 HSPs)
scaffold0029 (105-288)||(91191-91374)
scaffold0029 (105-288)||(96917-97100)
scaffold0029 (224-277)||(111885-111938)
[»] scaffold0001 (1 HSPs)
scaffold0001 (143-327)||(492978-493162)
[»] scaffold0553 (2 HSPs)
scaffold0553 (222-327)||(10145-10250)
scaffold0553 (249-318)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (222-327)||(1475-1580)
[»] scaffold0609 (1 HSPs)
scaffold0609 (99-291)||(5843-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (218-327)||(3352-3461)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-278)||(135251-135530)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-284)||(40524-40793)
[»] scaffold0261 (1 HSPs)
scaffold0261 (99-284)||(23562-23748)
[»] scaffold0183 (1 HSPs)
scaffold0183 (224-327)||(6-107)
[»] scaffold0249 (1 HSPs)
scaffold0249 (224-291)||(13880-13947)
[»] scaffold0034 (1 HSPs)
scaffold0034 (99-284)||(73161-73347)
[»] scaffold0026 (2 HSPs)
scaffold0026 (222-291)||(111686-111755)
scaffold0026 (222-277)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (218-281)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (138-276)||(16736-16875)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-276)||(34276-34553)
[»] scaffold2054 (1 HSPs)
scaffold2054 (224-277)||(717-770)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-276)||(8-284)
[»] scaffold0099 (1 HSPs)
scaffold0099 (99-275)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (138-276)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (203-276)||(116877-116951)
[»] scaffold0924 (1 HSPs)
scaffold0924 (222-277)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (222-277)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (222-277)||(30858-30913)
[»] scaffold0129 (1 HSPs)
scaffold0129 (225-291)||(45260-45326)
[»] scaffold0020 (1 HSPs)
scaffold0020 (203-276)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (225-318)||(1691-1784)
scaffold0796 (225-318)||(5714-5807)
[»] scaffold0235 (1 HSPs)
scaffold0235 (223-284)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (222-278)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (222-274)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (222-277)||(932-987)
scaffold0456 (222-277)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (222-277)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (218-276)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (222-276)||(1387-1441)
[»] scaffold1773 (1 HSPs)
scaffold1773 (225-286)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (224-277)||(1897-1950)
scaffold0117 (224-277)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (225-277)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (225-277)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 12033721 - 12033395
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||  || | |||||  |||||  ||||||||||| |    
T  12033721 caacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcaattcaattacgatcaacatcaacaacatag 12033622  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12033621 attaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttcccaattttac 12033522  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  12033521 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa-aagcaca 12033423  T
Q  300 gcaaatcagttcctaagttcttctctct 327  Q
     |||||||||||||||||||||||||||    
T  12033422 tcaaatcagttcctaagttcttctctct 12033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 14865624 - 14865951
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  14865624 caacaacaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 14865723  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  14865724 attaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttcccaattttac 14865823  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14865824 cttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcaca 14865923  T
Q  300 gcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||    
T  14865924 gcaaatcagttcctaagttcttctctct 14865951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 17131510 - 17131837
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||| |||| ||| | |||| |||| ||||| || ||||||||||||||||||||  ||||||||||   ||||  ||||||||||| |    
T  17131510 caacaacaattcagctcatttaagcattcatgcaaagcttccaaaattcatccatcatattctattttcattccaattacaatcaacatcaacaacatag 17131609  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  17131610 attaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttac 17131709  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  17131710 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcaca 17131809  T
Q  300 gcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||    
T  17131810 gcaaatcagttcctaagttcttctctct 17131837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 19235301 - 19235020
Alignment:
Q  44 aattcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacc 142  Q
    |||||||| |||||||||||||  || ||||| || ||||||  |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||    
T  19235301 aattcatctatcatattctattttcactccaaattatgatcaatatcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacc 19235203  T
Q  143 tgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatat 241  Q
    ||||||||| || ||||||| || |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  19235202 tgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatat 19235104  T
Q  242 tatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||||||| |||||||| ||||||||||    
T  19235103 tataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaaatcaattcctaagctcttctctct 19235020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13302515 - 13302195
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||  ||       
T  13302515 caacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacattataag 13302417  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || |||| ||||| |    
T  13302416 ttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaattcccca-ttttatc 13302318  T
Q  201 tt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    || ||||||| | || ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||    
T  13302317 ttcaagaacaatgcatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacaca 13302220  T
Q  300 gcaaatcagttcctaagttcttctc 324  Q
    ||||||||||||||| |||| ||||    
T  13302219 gcaaatcagttcctaggttcatctc 13302195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13313171 - 13312851
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||  ||       
T  13313171 caacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacattataag 13313073  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || ||| |||||| |    
T  13313072 ttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaatt-ccctattttatc 13312974  T
Q  201 tt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    || ||||||| | || |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||    
T  13312973 ttcaagaacaatccatttgattaattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacaca 13312876  T
Q  300 gcaaatcagttcctaagttcttctc 324  Q
    ||||||||||||||| |||| ||||    
T  13312875 gcaaatcagttcctaggttcatctc 13312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 13324063 - 13323782
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||  ||       
T  13324063 caacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacattataag 13323965  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || |||||||||| |    
T  13323964 ttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaattttatc 13323866  T
Q  201 tt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 282  Q
    || ||||||| |  |||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  13323865 ttcaagaacaatctaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg 13323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 23370560 - 23370455
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  322 ctctct 327  Q
    ||||||    
T  23370460 ctctct 23370455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 51301372 - 51301658
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| || ||||| |||||||||| |||||| ||||| || |||||| || | |   |||||||||||||| |||||  || |    
T  51301372 caacaacaattcagatcattctagcaatcaaacaaaacttctccaatt-atccaacaaattctaatctcctcataattctgatcacaa-caacattatag 51301469  T
Q  100 attaagaaatcatactaatcatcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 198  Q
    ||||||||||||| |||| ||  ||| || | ||||||||  ||||||||||  ||| |  |||||||| | | ||| |||||| |||  ||||||||||    
T  51301470 attaagaaatcattctaaacactaaactaaacacattaaa--cctgattcttgcaccatccctttcaaatt-agcatcaaccctaatt--cccaatttta 51301564  T
Q  199 c-cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
      || | ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||    
T  51301565 ttctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaa 51301658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 10389502 - 10389429
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 10414591 - 10414518
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10414518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 10421261 - 10421188
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10421188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 24933880 - 24933787
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |   | ||||| ||| ||||||||| |||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtt 24933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 234  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  235 tatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 20906736 - 20906411
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    |||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||  |||| |||||  |||||  ||||||||||| ||    
T  20906736 caacaacaattcagcccattcaagcattcttacaaaacttctcaattcatccatcatattctattttcatttcaattacgatcaacatcaacaacataga 20906637  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20906636 ttaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaaccctta-attcccaattttacc 20906538  T
Q  201 ttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacag 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||    
T  20906537 ttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaatagctcag 20906438  T
Q  301 caaatcagttcctaagttcttctctct 327  Q
    |||||| ||||||||||||||||||||    
T  20906437 caaatccgttcctaagttcttctctct 20906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 16090853 - 16091181
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||| |||||||||||| ||||| | |||| || ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  16090853 caacatcaattcagcccaatcaagcattcattcagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 16090952  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16090953 attaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttac 16091052  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    |||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16091053 cttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcaca 16091152  T
Q  300 gc-aaatcagttcctaagttcttctctct 327  Q
    || ||||||||||||||||||||||||||    
T  16091153 gcaaaatcagttcctaagttcttctctct 16091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 29181386 - 29181058
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  29181386 caacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 29181287  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||||||||||||  || |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  29181286 attaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttac 29181187  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29181186 cttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcaca 29181087  T
Q  300 gc-aaatcagttcctaagttcttctctct 327  Q
    || ||||||||||||||||||||||||||    
T  29181086 gcaaaatcagttcctaagttcttctctct 29181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 2966743 - 2966926
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||  ||||||||||  |||||  |||||||||||||    
T  2966743 caacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaacatgg 2966842  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966843 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 2971209 - 2971359
Alignment:
Q  177 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  277 gaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 2971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 288
Target Start/End: Original strand, 2465212 - 2465427
Alignment:
Q  71 tccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatc 170  Q
    ||||||| ||||||  |||||||| |  || || ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||     
T  2465212 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaatt 2465309  T
Q  171 atcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccctt 270  Q
      |||||||||| |||| || | ||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| |||||||||||    
T  2465310 gccattaaccctaatttcccaatttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccaccctt 2465409  T
Q  271 accttagaattgcaaaga 288  Q
    ||||||||||||||||||    
T  2465410 accttagaattgcaaaga 2465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 14319688 - 14319579
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 317  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  318 tcttctctct 327  Q
    ||||||||||    
T  14319588 tcttctctct 14319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 105 - 285
Target Start/End: Complemental strand, 3857536 - 3857357
Alignment:
Q  105 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 201  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 3857440  T
Q  202 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 285  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||||    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgcaa 3857357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 14230777 - 14230886
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 317  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||  |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  318 tcttctctct 327  Q
    ||| ||||||    
T  14230877 tctcctctct 14230886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 21231236 - 21230952
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  ||||| |||||||||||||| |||||  || |    
T  21231236 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacagattctaatttcattcaaattctgatcacaa-caacattatag 21231138  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa-tttta 198  Q
    ||||||||||||| || | || |||| |||||||    |||| ||||||||| ||| || |||||| ||||| ||| |||||| |  ||||||| |||||    
T  21231137 attaagaaatcattctgaacaccaaattacaacacattaaacatgattcttacaccattcctttcagaatcagcatcaaccctaa--ttcccaattttta 21231040  T
Q  199 ccttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
     || ||||||| ||||   |  |  ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231039 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 31155396 - 31155463
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 31155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 14567204 - 14567309
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 321  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  322 ctctct 327  Q
    ||||||    
T  14567304 ctctct 14567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 278  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 135218 - 135543
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||| ||    
T  135218 caacaacaattcagcccattcaagcattcatacaaaacttcccaattcatccatcatattctattttcattccaattttgatcacgatcaacaacataga 135317  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||    
T  135318 ttaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaatt-ctcaattttacc 135415  T
Q  201 tt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  135416 tttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcaca 135515  T
Q  300 gcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||| ||||||||||    
T  135516 gcaaatcagttcctaagctcttctctct 135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 79767 - 79439
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  79767 caacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 79668  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  79667 attaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttac 79568  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  79567 cttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcaca 79468  T
Q  300 gc-aaatcagttcctaagttcttctctct 327  Q
    || ||||||||||||||||||||||||||    
T  79467 gcaaaatcagttcctaagttcttctctct 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 21710597 - 21710923
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||||  |||||||||| ||||||  ||||||||||| |    
T  21710597 caacaacaattcagcccattcaagcattcatacaaagcttccaaaattcatccatcatattctattttcattccaattatgatcaacatcaacaacatag 21710696  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    |||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| | ||||||||||||||    
T  21710697 attaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttcccaattttac 21710795  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  21710796 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcaca 21710895  T
Q  300 gcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||    
T  21710896 gcaaatcagttcctaagttcttctctct 21710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 20851365 - 20851082
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||    
T  20851365 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacct 20851266  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    ||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851265 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 20851166  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20851165 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 20851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 20857992 - 20857709
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||    
T  20857992 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 20857893  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    ||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857892 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 20857793  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20857792 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 20857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 21706098 - 21706381
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||    
T  21706098 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 21706197  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    ||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706198 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 21706297  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  21706298 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 21706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 19663794 - 19663517
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| |  ||||| |||||||||| |||||| ||||| || |||||| |  |||||||||||||||||| | |||||  || |    
T  19663794 caacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatcac-agcaacattatag 19663696  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt-- 197  Q
    ||||||||||||| || | ||||||| |||||||    |||| | ||||||| ||| || |||||||||||| ||| |||||| |  |||||||||||      
T  19663695 attaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccctaa--ttcccaattttta 19663598  T
Q  198 accttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
      || ||||||| ||||   |  |  ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663597 ttctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 32651351 - 32651627
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattc-caattctgatcacaatcaacaacatg 98  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| || |||||  |||||||||||| | |||||  ||     
T  32651351 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcattcaaaattctgatcac-agcaacattata 32651449  T
Q  99 gattaagaaatcatactaatca-tcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattt 196  Q
    |||||||||||||| |||| || | ||| || | |||||  |||| ||||||||| ||| |  ||||| |||||| ||| |||||| |  ||||||||||    
T  32651450 gattaagaaatcattctaaacactaaaactaaacacatt--aaacatgattcttacaccatccctttc-aaatcagcatcaaccctaa--ttcccaattt 32651544  T
Q  197 tacctt--aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |   ||  |||||||  |||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651545 ttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  203 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 16147107 - 16146791
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  16147107 caacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 16147008  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  16147007 attaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttac 16146908  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcaca 299  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16146907 cttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcaca 16146808  T
Q  300 gc-aaatcagttcctaa 315  Q
    || ||||||||||||||    
T  16146807 gcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 99 - 284
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  198 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  163 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 260  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  261 tcccacccttacct 274  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 278
Target Start/End: Original strand, 15407918 - 15408196
Alignment:
Q  2 aacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    |||||||||||||  ||||| |  |||||||||||||||| |||||| ||||| |  |||||| |  ||||| |||||||||||| | |||||  || ||    
T  15407918 aacaacaattcagatcattctaacaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatcac-agcaacattataga 15408016  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt-ac 199  Q
    |||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || ||| |||||||| ||| ||||| || |||||||||||| |     
T  15408017 ttaagaaatcattctgaacatcaaattacaacacattaaacatgatccttaaaccattccttccaaaatcagcatcaaccc-taatttcccaattttcat 15408115  T
Q  200 cttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 278  Q
     | ||||||| ||||   |  |  ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408116 ttcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 53483708 - 53483774
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaa 53483774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 24320903 - 24320620
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||    
T  24320903 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacct 24320804  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    ||| | |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320803 gatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 24320704  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24320703 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 24320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 29643662 - 29643386
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    ||||||||||||||  ||||| || |||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||  || ||    
T  29643662 caacaacaattcagagcattctagcaatcatacaaaacttcacaattcatccaacatattctattttcattccaattctgatcacaatcaacattataga 29643563  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacc 200  Q
    ||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| ||||||||  ||| |||||||| |    
T  29643562 ttaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaaccctta-attctcaattttatc 29643464  T
Q  201 tt-aagaacagttcaa-ttgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    || | ||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643463 ttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 14056839 - 14056556
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| |  |||||||||||||||| |||||| ||||| |  |||||| | |||||| |||||||||||||| |||||  || |    
T  14056839 caacaacaattcagatcattctaacaatcatacaaaacttctccaatttatccaaccgattctaattccattcaaattctgatcacaa-caacattatag 14056741  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||| || | |||| || |||||||    |||| ||   |||| ||| |  |||||||||||| ||| |||||| |||| || | |||||     
T  14056740 attaagaaatcattctgaacatcgaattacaacacattaaacatg-gccttacaccatacctttcaaaatcagcatcaaccctaatttcccaatttttat 14056642  T
Q  200 cttaagaacagttca-attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    || ||||||| ||||  || |  ||||||||||| ||| ||| ||| | |||||| ||||| || ||||||||||||||| |||||    
T  14056641 ctcaagaacaattcatgttaaacaattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgca 14056556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 44477623 - 44477692
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaa 44477692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 44492781 - 44492850
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaa 44492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  191 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 234  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  235 tatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 9115 - 9396
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||    
T  9115 caacaacaattcagcccattcaagcaatcatacaaaacttcccaattcatccatcatattctattttcgttccaattctgatcacaatcaacaacataga 9214  T
Q  101 ttaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac- 199  Q
    || |||||||||||||| ||||||| |||||||  | |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||     
T  9215 ttgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaaccctta-attcccaattttact 9313  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 282  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9314 tttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 44 - 326
Target Start/End: Complemental strand, 25181162 - 25180880
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||||||||||||||||||  ||||||||||  |||||  ||||||||||| ||||||||||||||||||| ||||||||||||| | || ||||||    
T  25181162 aattcatccatcatattctattttcattccaattacgatcaacatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacct 25181063  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    |||   |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181062 gatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 25180963  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  25180962 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 44 - 324
Target Start/End: Original strand, 10399 - 10679
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||||||||||||||||||  ||||||||||  |||||  ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||    
T  10399 aattcatccatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacct 10498  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
     || | |||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10499 tatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatatta 10598  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctc 324  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||    
T  10599 tgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 27207778 - 27207669
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 317  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  318 tcttctctct 327  Q
    ||||||||||    
T  27207678 tcttctctct 27207669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 26885179 - 26885287
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 317  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  318 tcttctctct 327  Q
    ||||||||||    
T  26885278 tcttctctct 26885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 23168480 - 23168249
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  198 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 292  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23168284  T
Q  293 tagcacagcaaatcagttcctaagttcttctctct 327  Q
     ||||||||||| | || |||||||||||||||||    
T  23168283 aagcacagcaaaaccgtccctaagttcttctctct 23168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 23579737 - 23579506
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  198 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 292  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23579541  T
Q  293 tagcacagcaaatcagttcctaagttcttctctct 327  Q
     ||||||||||| | || |||||||||||||||||    
T  23579540 aagcacagcaaaaccgtccctaagttcttctctct 23579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 235  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  236 atatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 235  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  236 atatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 5706075 - 5706009
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| |||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaa 5706009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 291
Target Start/End: Complemental strand, 27366566 - 27366534
Alignment:
Q  259 aatcccacccttaccttagaattgcaaagacaa 291  Q
    |||| ||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaa 27366534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 50248 - 49919
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||||||||    
T  50248 caacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacatgg 50149  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa-tttta 198  Q
    |||||||||||||||||||| |  || || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  50148 attaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttta 50049  T
Q  199 ccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcac 298  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50048 ccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcac 49949  T
Q  299 agc-aaatcagttcctaagttcttctctct 327  Q
    | | ||||||||||||||||||||||||||    
T  49948 aacaaaatcagttcctaagttcttctctct 49919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 19236723 - 19237005
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||| ||||||  ||||||||||  |||||  ||||||||||| |||||||||  |||||||| | ||||||||||||| || ||||||    
T  19236723 aattcattcatcatactctattttcattccaattacgatcagcatcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacct 19236821  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 243  Q
    ||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236822 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatta 19236921  T
Q  244 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19236922 tgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 19237005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 22460978 - 22461261
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||    
T  22460978 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacct 22461077  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatatt 242  Q
    ||| |||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22461078 gatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatatt 22461176  T
Q  243 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||    
T  22461177 atgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttctctct 22461261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 22467602 - 22467885
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||    
T  22467602 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacct 22467701  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatatt 242  Q
    ||| |||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22467702 gatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatatt 22467800  T
Q  243 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||    
T  22467801 atgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttctctct 22467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 46 - 327
Target Start/End: Original strand, 20772796 - 20773072
Alignment:
Q  46 ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctga 145  Q
    ||||||||| |||||||| |  ||| |||||| ||||||  |||||||| || || || ||||||||||||||||||||| |||||||||| ||||||||    
T  20772796 ttcatccattatattctactttcat-ccaattatgatcaacatcaacaatatagagtaggaaatcatactaatcatcaaa-tacaacattataaacctga 20772893  T
Q  146 ttcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatg 245  Q
    |||||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  20772894 ttcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattata 20772992  T
Q  246 actattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||| |||||||| ||||||||||    
T  20772993 actattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaatcaattcctaagctcttctctct 20773072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 46 - 327
Target Start/End: Original strand, 20781571 - 20781847
Alignment:
Q  46 ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctga 145  Q
    ||||||||| |||||||| |  ||| |||||| ||||||  |||||||| || || || ||||||||| ||||||||||| |||||||||| ||||||||    
T  20781571 ttcatccattatattctactttcat-ccaattatgatcaacatcaacaatatagagtaggaaatcataataatcatcaaa-tacaacattataaacctga 20781668  T
Q  146 ttcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatg 245  Q
    |||||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  20781669 ttcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattata 20781767  T
Q  246 actattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||| |||||||| ||||||||||    
T  20781768 attattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaatcaattcctaagctcttctctct 20781847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 45 - 327
Target Start/End: Complemental strand, 24930160 - 24929880
Alignment:
Q  45 attcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| |||||||||||||  || ||||| || ||||||  |||||||  || ||||| ||||||||||||||||||||| |||||||||| ||||||    
T  24930160 attcatctatcatattctattttcactccaaattatgatcaatatcaacattatagattaggaaatcatactaatcatcaaa-tacaacattataaacct 24930062  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatatt 242  Q
    |||||||| || ||| ||| || |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||| |||||| |||||||    
T  24930061 gattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaattttaccttaagaacagttaaattgattaattttttagaaatcatatatt 24929963  T
Q  243 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |  ||||||||||||||||||||||||||||||||||||| ||||| ||  ||  |||||| ||| |||||||| ||||||||||    
T  24929962 agaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtgcagcaagtcaattcctaagctcttctctct 24929880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 28909466 - 28909240
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 197  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28909466 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28909369  T
Q  198 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28909368 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28909270  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||| |||||| ||||||||||||    
T  28909269 cagcaaatcaattcctaggttcttctctct 28909240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 28945861 - 28945635
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 197  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28945861 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28945764  T
Q  198 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28945763 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28945665  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||| |||||| ||||||||||||    
T  28945664 cagcaaatcaattcctaggttcttctctct 28945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 28896218 - 28895992
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 197  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28896218 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28896121  T
Q  198 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28896120 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28896022  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||| |||||| ||||||||||||    
T  28896021 cagcaaatcaattcctaggttcttctctct 28895992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 28925044 - 28924818
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 197  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28925044 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28924947  T
Q  198 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28924946 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28924848  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||| |||||| ||||||||||||    
T  28924847 cagcaaatcaattcctaggttcttctctct 28924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 285
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  108 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 207  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  208 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 285  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 285
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  108 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 207  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  208 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 285  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 28889514 - 28889288
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 197  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28889514 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28889417  T
Q  198 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28889416 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28889318  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
      |||||||| |||||| ||||||||||||    
T  28889317 atgcaaatcaattcctaggttcttctctct 28889288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 284
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  198 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 234  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  235 tatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 23111476 - 23111200
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattcc-aattctgatcacaatcaacaacatg 98  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||| ||||  || |||||| || | |||  |||| ||||| ||  |||||  ||     
T  23111476 caacaacaattcagaccattctagcaatcatacaaaacttctccaatttatcccacaaattctaatctccttcataattttgatcccag-caacattata 23111378  T
Q  99 gattaagaaatcatactaatcatcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt 197  Q
    |||||||||||||| |||| |   ||| || | |||||||| |  ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||    
T  23111377 gattaagaaatcattctaaaccctaaactaaacacattaaaca--tgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttt 23111282  T
Q  198 acctt--aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
       ||  ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23111281 tattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 38144591 - 38144487
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagca-aatcagttcctaagttct 320  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| | |  |||| ||||||| |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga-atgatta-cacagcacaatcggttcctaagttct 38144494  T
Q  321 tctctct 327  Q
    |||||||    
T  38144493 tctctct 38144487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 278  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 20008180 - 20007897
Alignment:
Q  44 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacct 143  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||| || |||||||||| |||||||| ||||||||||||||| || ||||||    
T  20008180 aattcattcatcatattctattttcattccaattacgatcagcatcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 20008081  T
Q  144 gattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatatt 242  Q
    ||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20008080 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatatt 20007981  T
Q  243 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  20007980 atgactattgaaagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatgagttcctaagttcttctctct 20007897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 9099304 - 9099023
Alignment:
Q  44 aattcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacc 142  Q
    |||||||| |||||||||||||  || ||||| || ||||||  |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||    
T  9099304 aattcatctatcatattctattttcactccaaattatgatcaatatcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacc 9099206  T
Q  143 tgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatat 241  Q
    ||||||||| || ||||||| || |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  9099205 tgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatat 9099107  T
Q  242 tatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||||||| |||||||| ||||||||||    
T  9099106 tataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaaatcaattcctaagctcttctctct 9099023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 327
Target Start/End: Complemental strand, 21364684 - 21364433
Alignment:
Q  71 tccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatc 170  Q
    ||||||| ||||||  |||||||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||     
T  21364684 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatg 21364586  T
Q  171 atcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccctt 270  Q
      |||||||||| |||| |||||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||    
T  21364585 c-cattaaccctaattt-cccaattttaccataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccaccctt 21364489  T
Q  271 accttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||| |||||||||||||||  ||||||||||| || |||||| ||||||||||||    
T  21364488 acctttgaattgcaaagacaa-aagcacagcaaaacaattcctaggttcttctctct 21364433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 327
Target Start/End: Complemental strand, 23968666 - 23968415
Alignment:
Q  71 tccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatc 170  Q
    ||||||| ||||||  |||||||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||     
T  23968666 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatg 23968568  T
Q  171 atcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccctt 270  Q
      |||||||||| |||| |||||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||    
T  23968567 c-cattaaccctaattt-cccaattttaccataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccaccctt 23968471  T
Q  271 accttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||| |||||||||||||||  ||||||||||| || |||||| ||||||||||||    
T  23968470 acctttgaattgcaaagacaa-aagcacagcaaaacaattcctaggttcttctctct 23968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 327
Target Start/End: Complemental strand, 11288721 - 11288620
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 323  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  324 ctct 327  Q
    ||||    
T  11288623 ctct 11288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 327
Target Start/End: Original strand, 31252300 - 31252529
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  198 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 293  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||        
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  294 agcacagcaaatcagttcctaagttcttctctct 327  Q
    | |||||| |||| ||||||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctctct 31252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 15458492 - 15458559
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 15465087 - 15465154
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 9187274 - 9187550
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  ||||| |||||||||||||| |||||  || |    
T  9187274 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaaca-attctaatttcattcaaattctgatcacaa-caacattatag 9187371  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa-tttta 198  Q
    ||||||||||||| || | ||  ||| |||||||    |||| ||||||||| | | || |||||||||||| ||| |||||| |  ||||||| |||||    
T  9187372 attaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaaccctaa--ttcccaattttta 9187469  T
Q  199 cctt-aagaacagttcaatt-gat-taattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
      || ||||||| ||||||| ||| || |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187470 tattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 34640041 - 34639972
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaa 34639972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 34646715 - 34646646
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaa 34646646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 28288537 - 28288461
Alignment:
Q  249 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    ||||| ||||| || ||||||||||||||||||||||||||||  | |||||| |||||||||||||| | ||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaa-aaacacagc-aatcagttcctaagcttttctctct 28288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 29097688 - 29097789
Alignment:
Q  44 aattcatccatcatattctattccca-ttccaattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacc 142  Q
    |||||||| || ||||||||||  || ||| |||| ||||||  |||||||  || ||||| ||||||||||||||||||||| ||||||| || |||||    
T  29097688 aattcatctattatattctattttcacttcaaattatgatcaatatcaacattatagattaggaaatcatactaatcatcaaa-tacaacagtataaacc 29097786  T
Q  143 tga 145  Q
    |||    
T  29097787 tga 29097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 24513120 - 24513008
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattc-caattctgatcacaatcaacaacatg 98  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  |||||  |||||||||||||| |||||  ||     
T  24513120 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatttcattcaaaattctgatcacaa-caacattata 24513022  T
Q  99 gattaagaaatcat 112  Q
    ||| ||||||||||    
T  24513021 gatcaagaaatcat 24513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 24563475 - 24563507
Alignment:
Q  259 aatcccacccttaccttagaattgcaaagacaa 291  Q
    |||| ||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaa 24563507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 138 - 327
Target Start/End: Complemental strand, 2051 - 1862
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 236  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  237 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctct 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 112 - 327
Target Start/End: Original strand, 889 - 1101
Alignment:
Q  112 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagt 211  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  212 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttc 311  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatcaattc 1085  T
Q  312 ctaagttcttctctct 327  Q
    ||| ||||||||||||    
T  1086 ctaggttcttctctct 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 1136 - 1424
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcataca-aaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||||||| ||||| | ||||||| |||||||| ||||||  ||| | || |||||  ||| |||||| ||||||  | |||||| |  |    
T  1136 caacaacaattcagcccaatcaagcattcatacagaaacttccaaattcacacataacatgctattttcat-ccaattatgatcaacaacaacaatacag 1234  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    |||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| ||||||||||||||||    
T  1235 attaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaattttac 1332  T
Q  200 cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  1333 cttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 10020 - 10344
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||| ||||| || |||||| || | |   |||||||||||||| |||||  || |    
T  10020 caacaacaattcagaccattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcctcataattctgatcacaa-caacattatag 10118  T
Q  100 attaagaaatcatactaatcatcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 198  Q
    ||||||||||||| |||| ||  ||| || | |||||||| |  ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||||||    
T  10119 attaagaaatcattctaaacactaaactaaacacattaaaca--tgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaatttta 10214  T
Q  199 c-cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 297  Q
      || | ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||  ||||    
T  10215 ttctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagca 10314  T
Q  298 cagcaaatcagttcctaagttcttctctct 327  Q
    ||||||||| ||||||||||||||||||||    
T  10315 cagcaaatccgttcctaagttcttctctct 10344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 318
Target Start/End: Complemental strand, 16266 - 16023
Alignment:
Q  73 caattctgatcacaatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcat 172  Q
    ||||| ||||||  || ||||| || |||||  |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| |||||||||    
T  16266 caattatgatcaatatgaacaatatagattagaaaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcat 16169  T
Q  173 cattaacccttattttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccaccctta 271  Q
    |||||||||| | || || | ||||| ||||| ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  16168 cattaaccctaaatt-ccaatttttatcttaaaaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccaccctta 16070  T
Q  272 ccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    ||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  16069 ccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 288
Target Start/End: Complemental strand, 91374 - 91191
Alignment:
Q  105 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 201  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 91278  T
Q  202 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 288  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 288
Target Start/End: Complemental strand, 97100 - 96917
Alignment:
Q  105 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 201  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 97004  T
Q  202 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 288  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 96917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 327
Target Start/End: Complemental strand, 493162 - 492978
Alignment:
Q  143 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 239  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  240 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctct 327  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctctct 492978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 10250 - 10145
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  322 ctctct 327  Q
    ||||||    
T  10150 ctctct 10145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  249 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    |||||| ||||||||||||||||||||||||||  |   | ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 1580 - 1475
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  322 ctctct 327  Q
    ||||||    
T  1480 ctctct 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 291
Target Start/End: Complemental strand, 6035 - 5843
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  198 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 5843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 3461 - 3352
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 317  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  318 tcttctctct 327  Q
    ||| ||||||    
T  3361 tctcctctct 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 135251 - 135530
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| || |||||||||||||||| ||||||  |||| |  |||||| |  ||||| |||||||||||||| |||||  || |    
T  135251 caacaacaattcagatcattccagcaatcatacaaaacttctccaatttttccaaccgattctaatttcattcaaattctgatcacaa-caacattatag 135349  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||     
T  135350 attaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaatttttat 135449  T
Q  200 cttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 278  Q
    || ||||||| ||||   |  |  ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135450 ctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 284
Target Start/End: Complemental strand, 40793 - 40524
Alignment:
Q  17 cattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatggattaagaaatcatact 115  Q
    ||||| || |||||||||||||||| |||||| ||||| |  |||||| |  ||||| ||||||||||||| ||||||  || |||||||||||||| ||    
T  40793 cattctagcaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatcaca-tcaacattatagattaagaaatcattct 40695  T
Q  116 aatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttca- 214  Q
     | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | ||||| || ||||||| ||||     
T  40694 gaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaatttttatctcaagaacaattcat 40595  T
Q  215 -attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
      |  |  ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40594 gttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 284
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  198 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 6 - 107
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 323  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  324 ctct 327  Q
    ||||    
T  104 ctct 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 13947 - 13880
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 13880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 284
Target Start/End: Original strand, 73161 - 73347
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 197  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  198 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 111686 - 111755
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaa 111755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 281  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 234  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  235 tatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 34553 - 34276
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| |  ||||| |||||||||| |||||| ||||| || |||||| |  |||||||||||||||||| | |||||  || |    
T  34553 caacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatcac-agcaacattatag 34455  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt-- 197  Q
    ||||||||||||| || | ||||||| |||||||    |||| | ||||||| ||| || |||||||||||| ||| |||||| |  |||||||||||      
T  34454 attaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccctaa--ttcccaattttta 34357  T
Q  198 accttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
      || ||||||| ||||   |  |  ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34356 ttctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 717 - 770
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 284 - 8
Alignment:
Q  1 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatgg 99  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  | ||| |||||||| ||||| ||||   || |    
T  284 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatttccttcaaattctgaccacaa-caacgttatag 186  T
Q  100 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac 199  Q
    ||||||||||||| || | ||  ||| || |||     |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||      
T  185 attaagaaatcattctgaacactaaattaaaactcattaaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaattttta 88  T
Q  200 ctt--aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
     ||  ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  87 ttttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 12833 - 13019
Alignment:
Q  99 gattaagaaatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aat 194  Q
    ||||| |||||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | |    
T  12833 gattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatt 12932  T
Q  195 tttacc-ttaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 275  Q
    |||||| |||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12933 tttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  138 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 234  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  235 tatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  203 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 45326 - 45260
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 291  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaa 45260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  203 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 318  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 22646 - 22585
Alignment:
Q  223 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 284  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || |||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca 22585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 278  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 274  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 932 - 987
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  218 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  222 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 276  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 286  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  224 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 294 - 346
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  225 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 277  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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