View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10944_low_8 (Length: 225)

Name: NF10944_low_8
Description: NF10944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10944_low_8
NF10944_low_8
[»] chr7 (17 HSPs)
chr7 (1-207)||(38029591-38029800)
chr7 (72-207)||(36159386-36159521)
chr7 (69-207)||(34405056-34405194)
chr7 (72-207)||(29322589-29322724)
chr7 (92-206)||(26455197-26455311)
chr7 (69-188)||(39703885-39704004)
chr7 (69-204)||(40462317-40462452)
chr7 (100-200)||(24396474-24396574)
chr7 (109-203)||(2732828-2732922)
chr7 (100-207)||(15237404-15237511)
chr7 (69-207)||(728972-729101)
chr7 (99-207)||(40107933-40108038)
chr7 (69-207)||(16718824-16718975)
chr7 (69-207)||(17693034-17693185)
chr7 (106-206)||(20078025-20078116)
chr7 (132-202)||(40241671-40241741)
chr7 (110-167)||(32201702-32201759)
[»] chr6 (3 HSPs)
chr6 (69-207)||(26898837-26898975)
chr6 (93-184)||(14365972-14366063)
chr6 (69-207)||(28078625-28078763)
[»] chr2 (11 HSPs)
chr2 (69-203)||(37995328-37995462)
chr2 (98-200)||(10128588-10128690)
chr2 (135-207)||(44240556-44240628)
chr2 (124-207)||(25236591-25236673)
chr2 (69-143)||(12008481-12008555)
chr2 (155-207)||(38329401-38329453)
chr2 (145-207)||(6686913-6686975)
chr2 (70-142)||(25882661-25882733)
chr2 (110-155)||(37073509-37073554)
chr2 (100-146)||(17069854-17069900)
chr2 (100-146)||(17075916-17075962)
[»] chr3 (13 HSPs)
chr3 (66-207)||(48314526-48314667)
chr3 (69-207)||(49067082-49067220)
chr3 (69-207)||(13495898-13496036)
chr3 (69-207)||(40823558-40823696)
chr3 (70-200)||(5557849-5557979)
chr3 (69-202)||(51657205-51657338)
chr3 (62-207)||(8235144-8235284)
chr3 (152-207)||(53926376-53926431)
chr3 (98-191)||(8113181-8113278)
chr3 (145-205)||(55370500-55370560)
chr3 (70-207)||(47756865-47756992)
chr3 (100-207)||(38362752-38362859)
chr3 (69-162)||(49453233-49453326)
[»] scaffold0891 (1 HSPs)
scaffold0891 (69-207)||(1261-1399)
[»] chr5 (16 HSPs)
chr5 (92-207)||(17413527-17413642)
chr5 (69-207)||(19121285-19121423)
chr5 (110-207)||(43622646-43622743)
chr5 (69-207)||(42691631-42691769)
chr5 (87-207)||(35392144-35392264)
chr5 (124-207)||(41290651-41290734)
chr5 (113-203)||(32719992-32720082)
chr5 (100-207)||(17546621-17546728)
chr5 (69-207)||(25480220-25480356)
chr5 (109-207)||(18241401-18241498)
chr5 (109-203)||(41040987-41041081)
chr5 (124-205)||(3891275-3891356)
chr5 (140-207)||(22740908-22740975)
chr5 (109-179)||(26161553-26161623)
chr5 (69-142)||(5399100-5399173)
chr5 (104-207)||(29379959-29380062)
[»] chr4 (18 HSPs)
chr4 (69-207)||(24539219-24539357)
chr4 (69-205)||(9061476-9061612)
chr4 (69-205)||(11653576-11653712)
chr4 (69-207)||(40682128-40682266)
chr4 (92-207)||(4875455-4875570)
chr4 (98-207)||(42351074-42351183)
chr4 (69-207)||(2527658-2527796)
chr4 (73-207)||(22455093-22455225)
chr4 (92-207)||(54243655-54243770)
chr4 (69-200)||(46420704-46420837)
chr4 (125-207)||(23633260-23633342)
chr4 (92-184)||(23633374-23633466)
chr4 (145-207)||(48809285-48809347)
chr4 (69-207)||(49357854-49357983)
chr4 (66-162)||(1326075-1326171)
chr4 (84-207)||(12758477-12758592)
chr4 (69-149)||(49748220-49748300)
chr4 (158-200)||(49750382-49750424)
[»] scaffold0090 (1 HSPs)
scaffold0090 (69-205)||(12590-12726)
[»] chr8 (8 HSPs)
chr8 (69-203)||(41842822-41842956)
chr8 (69-207)||(34893026-34893164)
chr8 (79-207)||(16913160-16913289)
chr8 (124-207)||(24255246-24255329)
chr8 (124-207)||(27853820-27853903)
chr8 (100-179)||(15096730-15096810)
chr8 (92-150)||(37063913-37063971)
chr8 (69-155)||(45261958-45262044)
[»] chr1 (9 HSPs)
chr1 (69-203)||(50290294-50290428)
chr1 (69-204)||(39268247-39268382)
chr1 (111-207)||(28946644-28946740)
chr1 (124-207)||(21007795-21007878)
chr1 (109-203)||(52407917-52408010)
chr1 (98-204)||(43991669-43991774)
chr1 (110-203)||(45914054-45914147)
chr1 (69-155)||(8998809-8998895)
chr1 (72-155)||(49193134-49193217)
[»] scaffold1155 (1 HSPs)
scaffold1155 (69-203)||(70-204)
[»] scaffold0642 (1 HSPs)
scaffold0642 (69-203)||(102-236)
[»] scaffold0345 (1 HSPs)
scaffold0345 (69-203)||(10013-10147)
[»] scaffold0105 (1 HSPs)
scaffold0105 (69-203)||(28833-28967)
[»] scaffold0246 (1 HSPs)
scaffold0246 (69-207)||(8799-8938)
[»] scaffold0044 (1 HSPs)
scaffold0044 (69-207)||(87784-87922)
[»] scaffold0210 (2 HSPs)
scaffold0210 (69-142)||(17760-17833)
scaffold0210 (69-142)||(25652-25725)
[»] scaffold0108 (1 HSPs)
scaffold0108 (69-156)||(13604-13690)
[»] scaffold1449 (1 HSPs)
scaffold1449 (100-146)||(170-216)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 38029800 - 38029591
Alignment:
Q  1 aaattgagtggctgcttactaggttgagagaaaaaggctacta--ggtattacataaaattggttacaattagaccatcgacccgtgctaacacacggat 98  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38029800 aaattgagtggcttcttactaggttgagagaaaaaggctactataggtattacataaaattggttacaactagaccatcgacccgtgctaacacacggat 38029701  T
Q  99 catatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagt-atttcataatattaagaagcatagacg 197  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  38029700 catattgaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgttatgattgtcatatagtaatttcataatattaagaagcatagacg 38029601  T
Q  198 ttggtactgt 207  Q
    ||||||||||    
T  38029600 ttggtactgt 38029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 36159521 - 36159386
Alignment:
Q  72 accatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagta 171  Q
    ||||||||||||||||||| ||||  ||||||  || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36159521 accatcgacccgtgctaacgcacgagtcatatgaaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatataata 36159422  T
Q  172 tttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||||||||||    
T  36159421 tttcataatattaagaagcatagacgttggtactgt 36159386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 34405056 - 34405194
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||  |||||||||  |||| | |||| ||| |||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||    
T  34405056 tagaccatcgattcgtgctaacgtacgggtaatatggaaggtaatatttgacggtaataagtaacaaaatagtttaaatgaatgtcatgattgtcatata 34405155  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34405156 gtatttcataatattaagaagcatagacgttggtactgt 34405194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 29322724 - 29322589
Alignment:
Q  72 accatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagta 171  Q
    |||||| |||||||||||| ||| | |||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29322724 accatctacccgtgctaacgcaccggtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtcataattgtcatatagta 29322625  T
Q  172 tttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||| |||||||||||||||||||| ||||||    
T  29322624 tttcataacattaagaagcatagacgttgatactgt 29322589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 26455311 - 26455197
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 191  Q
    ||||| |||||||||| |||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  26455311 cacgggtcatatcgaaggtaatatttgacggtaatagataacaaaatagtttagataaatgtcatgattgtcatatagtatttcataatattaagaagta 26455212  T
Q  192 tagacgttggtactg 206  Q
    |||||||||||||||    
T  26455211 tagacgttggtactg 26455197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 39703885 - 39704004
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||||| |||| ||||| |||| || |||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  39703885 tagaccatcgacccgtgctaacgcacgggtcatttcgaaggtaaaatatgacggtaataggtagcaaaatagtttagatgaatgtcatgattgtcatata 39703984  T
Q  169 gtatttcataatattaagaa 188  Q
    ||||||||||||||||||||    
T  39703985 gtatttcataatattaagaa 39704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 40462317 - 40462452
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||||| ||||||  || |||||||||||  | ||| ||||| ||||||||||||||||||||||||||| |||||||    
T  40462317 tagaccatcgacccgtgctaacgcacgggtcatatgaaaggtaatatttgatggtaattggtaataaaatagtttagatgaatgtcatgattatcatata 40462416  T
Q  169 gtatttcataatattaagaagcatagacgttggtac 204  Q
    ||||||||||||||||||||  ||||||||||||||    
T  40462417 gtatttcataatattaagaaatatagacgttggtac 40462452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 24396474 - 24396574
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgtt 199  Q
    |||| ||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24396474 atatggaaggtaatatttgacggtaataggtaacaaaataatttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgtt 24396573  T
Q  200 g 200  Q
    |    
T  24396574 g 24396574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 2732828 - 2732922
Alignment:
Q  109 gtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2732828 gtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatataatatttcataatattaagaagcatagatgttggta 2732922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 15237511 - 15237404
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgtt 199  Q
    |||| ||| |||||| ||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  15237511 atatagaaggtaataattgacggtaataggtaacaaaattgtttagatgaatgttatgattgtcatatagtatttcataatattaagaagtatagacgtt 15237412  T
Q  200 ggtactgt 207  Q
    ||||||||    
T  15237411 ggtactgt 15237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 729101 - 728972
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||||||||  |||| |||||||||| |||||||||||| | |||||||||| ||||||||||||||||||         |||||||    
T  729101 tagaccatcgacccgtgctaacgtacgggtcatatcgaaggtaatatttgacggtaataggtaaccaaatagtttagatgaatg---------tcatata 729011  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
     ||||||||||||||||||||||||||||||||||||||    
T  729010 atatttcataatattaagaagcatagacgttggtactgt 728972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 40108038 - 40107933
Alignment:
Q  99 catatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgt 198  Q
    ||||| ||| |||||||||||| | |||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40108038 catatggaaggtaatatttgac-gtaatatgtaacaatat--tttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgt 40107942  T
Q  199 tggtactgt 207  Q
    |||||||||    
T  40107941 tggtactgt 40107933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 16718975 - 16718824
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||||     ||||| | |||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  16718975 tagaccatcgacccgtgcattagcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 16718876  T
Q  169 g-------------tatttcataatattaagaagcatagacgttggtactgt 207  Q
    |             ||||||||||||||||||||||||||||||||||||||    
T  16718875 gtattgtcatgtagtatttcataatattaagaagcatagacgttggtactgt 16718824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 17693185 - 17693034
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||||     ||||| | |||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  17693185 tagaccatcgacccgtgcattagcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 17693086  T
Q  169 g-------------tatttcataatattaagaagcatagacgttggtactgt 207  Q
    |             ||||||||||||||||||||||||||||||||||||||    
T  17693085 gtattgtcatgtagtatttcataatattaagaagcatagacgttggtactgt 17693034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 20078116 - 20078025
Alignment:
Q  106 aatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtact 205  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  20078116 aatgtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcat---------atagtatttcataatattaagaagcatagacgttggtact 20078026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 40241741 - 40241671
Alignment:
Q  132 acaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  40241741 acaaaatagtttagatgaatgtcatgattgtcatattgtattttataatattaagaagcataaatgttggt 40241671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 32201759 - 32201702
Alignment:
Q  110 taatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatat 167  Q
    ||||||||||| | ||||  || ||||||| |||||||||||||||||||||| ||||    
T  32201759 taatatttgacggtaataaatagcaaaataatttagatgaatgtcatgattgtaatat 32201702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 26898837 - 26898975
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||| ||||||| |||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  26898837 tagaccatcgacccgtgctaccacacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 26898936  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26898937 gtatttcataatattaagaagcatagtcgttggtactgt 26898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 14365972 - 14366063
Alignment:
Q  93 acggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatatta 184  Q
    ||||||||||||||| | |||||||||  | |||||  ||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||    
T  14365972 acggatcatatcgaaggcaatatttgatggtaatagaaaacaaaatagtttagataaatgtcataattttcatatagtattttataatatta 14366063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 28078625 - 28078763
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||| || | ||||| |||||||||| |||||||||  |||  | | ||||||||| ||||||  |||||||||| |||||  ||      
T  28078625 tagaccatcgacccgtgatatcgcacgggtcatatcgaaggtaatatttagcagtgacatgtaacaaaagagtttaattgaatgtcataattgttctaat 28078724  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
      | |||||||||||||  | ||||||| ||||||||||    
T  28078725 taaattcataatattaattatcatagacattggtactgt 28078763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 37995462 - 37995328
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||    
T  37995462 tagaccatcgacccgtgctaacacacggatcatatggaaggtaatatttgacggtagtaggtaacaaaatagtttagataaatgtcatgattgtcatata 37995363  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    |||||||||||||||||||||||||||||||||||    
T  37995362 gtatttcataatattaagaagcatagacgttggta 37995328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 10128588 - 10128690
Alignment:
Q  98 tcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacg 197  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  10128588 tcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatacaatatttcataatattaagaagcatagacg 10128687  T
Q  198 ttg 200  Q
    |||    
T  10128688 ttg 10128690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 44240556 - 44240628
Alignment:
Q  135 aaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44240556 aaatagtttagatcaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 44240628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 25236673 - 25236591
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  25236673 aataggtaacaaa-tagtttagataaatgtcatgattgtcatataatattttataatattaagaagcatagacgttggtactgt 25236591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 12008481 - 12008555
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagttt 143  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||    
T  12008481 tagaccattgacccgtgctaacacacgggtcatatcgaaggtaatatttgacagtaatagataacaaaatagttt 12008555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 38329453 - 38329401
Alignment:
Q  155 atgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38329453 atgaatgtcatatagtatttcataatattaagaagcatagacgttggtactgt 38329401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 6686975 - 6686913
Alignment:
Q  145 gatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  6686975 gatgaatttcatgattgtcatataatatttcatattattaaaaagcatagacgttggtactgt 6686913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 25882661 - 25882733
Alignment:
Q  70 agaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtt 142  Q
    |||||||| |||||||||||| |||   |||||||||| |||||||||||| | |||||||||||||||||||    
T  25882661 agaccatcaacccgtgctaacgcacatgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 25882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 37073554 - 37073509
Alignment:
Q  110 taatatttgacagcaataggtaacaaaatagtttagatgaatgtca 155  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||    
T  37073554 taatatttgacagtaataggtaacaaaatagtttagttgaaggtca 37073509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 17069900 - 17069854
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttaga 146  Q
    |||| ||| |||||||||||| | |||||||||||||||||||||||    
T  17069900 atatggaaggtaatatttgacggtaataggtaacaaaatagtttaga 17069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 17075962 - 17075916
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttaga 146  Q
    |||| ||| |||||||||||| | |||||||||||||||||||||||    
T  17075962 atatggaaggtaatatttgacggtaataggtaacaaaatagtttaga 17075916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 48314667 - 48314526
Alignment:
Q  66 aattagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcat 165  Q
    ||||||| |||||||||||||||||  |||| |||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  48314667 aattagatcatcgacccgtgctaacgtacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcat 48314568  T
Q  166 atagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  48314567 atagtatttcataatattaagaagcatagacgttggtactgt 48314526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 49067082 - 49067220
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||    
T  49067082 tagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcattta 49067181  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
     ||||||||||||||||||||||||||||||||||||||    
T  49067182 atatttcataatattaagaagcatagacgttggtactgt 49067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 13496036 - 13495898
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||||||||||  | || |||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||    
T  13496036 tagaccatcgacccgtgctaacgtaagggtcatatcgaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtcttgattgtcatata 13495937  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  13495936 gtatttcataatattaagaagcatagacgtttgtactgt 13495898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 40823696 - 40823558
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||  ||||| |||||| ||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  40823696 tagaccatcgacccgtgctaaggcacgggtcatatggaaggtaatatttgaccgtaataggtaaaaaaatagtttagatgaatgtcatgattgtcatata 40823597  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||| ||||||||||||||||||| | |||||||||||    
T  40823596 gtattacataatattaagaagcataaatgttggtactgt 40823558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 5557979 - 5557849
Alignment:
Q  70 agaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatag 169  Q
    ||||||| | ||||||||||| ||| | |||||| |||||||||||||||    |||||||||||||||| |||||||||||||||| ||| ||||||||    
T  5557979 agaccattggcccgtgctaacgcacaggtcatatggaatgtaatatttgatgataataggtaacaaaataatttagatgaatgtcataattttcatatag 5557880  T
Q  170 tatttcataatattaagaagcatagacgttg 200  Q
    |||||||||||||||||||||||||||||||    
T  5557879 tatttcataatattaagaagcatagacgttg 5557849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 51657338 - 51657205
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| |||   |||||| ||| |||||||||||  | || | |||||||||||||||||||||||||||| |||||||||||    
T  51657338 tagaccatcgacccgtgctaacgcacatgtcatatggaaggtaatatttgagggtaacaagtaacaaaatagtttagatgaatgtcataattgtcatata 51657239  T
Q  169 gtatttcataatattaagaagcatagacgttggt 202  Q
    ||||||| ||||||||||||| ||| ||||||||    
T  51657238 gtatttcgtaatattaagaagtataaacgttggt 51657205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 8235284 - 8235144
Alignment:
Q  62 ttacaattagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattg 161  Q
    |||||| ||||||||||  | |||||||| ||||| ||||||| |||     |||||||   || ||||||||||||||||||||||||||||| |||||    
T  8235284 ttacaactagaccatcgttcagtgctaacgcacgggtcatatcaaat-----atttgacgataacaggtaacaaaatagtttagatgaatgtcacgattg 8235190  T
Q  162 tcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  8235189 tcatatagtatttcataacaataagaagcatagacgttggtactgt 8235144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 53926376 - 53926431
Alignment:
Q  152 gtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53926376 gtcatgattgtcatatagtattttataatattaagaagcatagacgttggtactgt 53926431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 8113181 - 8113278
Alignment:
Q  98 tcatatcgaatgtaatatttgacagcaatag----gtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 191  Q
    ||||||||||||||||||||||  | ||||     |||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  8113181 tcatatcgaatgtaatatttgattgtaataaataagtaataaaatagtttaaatgaatgtcatgattgtcatataatatttcatgatattaagaagca 8113278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 55370560 - 55370500
Alignment:
Q  145 gatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtact 205  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55370560 gatgagtgttatgattgtcatatagcatttcataatattaagaagcatagacgttggtact 55370500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 47756865 - 47756992
Alignment:
Q  70 agaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatag 169  Q
    |||||||||| |  || |||| ||| |||||||| ||| ||||||||||| || ||||  |||||||||| ||||||||||||||||         |||     
T  47756865 agaccatcgatctatgttaacgcacagatcatatggaaggtaatatttgatagtaataactaacaaaata-tttagatgaatgtcat---------atat 47756954  T
Q  170 tatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||| |||||||||||    
T  47756955 tatttcataatattaagaagcatagatgttggtactgt 47756992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 38362859 - 38362752
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgtt 199  Q
    |||||||| |||||||||||| | |||| |||| |||||||||||| |||||||||| |||||  ||    | |||||||||||||  | ||||||| ||    
T  38362859 atatcgaaggtaatatttgacggtaatatgtaataaaatagtttagttgaatgtcataattgttctaattaaattcataatattaattatcatagacatt 38362760  T
Q  200 ggtactgt 207  Q
    ||||||||    
T  38362759 ggtactgt 38362752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 49453233 - 49453326
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgt 162  Q
    ||||||||||||| |||||| | | |||  ||||| ||| ||||||||| | || |||| ||| ||||||||||||| | |||||||| |||||    
T  49453233 tagaccatcgacctgtgctatcgcgcgggacatattgaaggtaatattttatagtaatatgtagcaaaatagtttagttaaatgtcataattgt 49453326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 1261 - 1399
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||| |||||||||| ||||| |||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  1261 tagaccatcgatccgtgctaacgcacgggtcatatggaaggtaatatttgacagtaatagataacaaaatagtttagatgaatgtcatgattgtcatata 1360  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  1361 gtatttcataatattaagaagcatagatgttggtactgt 1399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 17413527 - 17413642
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 191  Q
    |||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17413527 cacggatcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 17413626  T
Q  192 tagacgttggtactgt 207  Q
    ||||||||||||||||    
T  17413627 tagacgttggtactgt 17413642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 19121285 - 19121423
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||| | |||||| ||| ||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||||    
T  19121285 tagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttcacggtaataggtaacaaaatagtttagatgaatgtcatgtttgtcatata 19121384  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  19121385 gtatttcataatattaagaaacataaacgttggtactgt 19121423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 43622743 - 43622646
Alignment:
Q  110 taatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43622743 taatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 43622646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 42691631 - 42691769
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||| |||||||| ||||  |||||| ||| |||||||||||  |  |||  |||||||||||||||||||||||||||||||||||||||    
T  42691631 tagaccatcgacctgtgctaacgcacgagtcatatggaaggtaatatttgatggtgatatctaacaaaatagtttagatgaatgtcatgattgtcatata 42691730  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  42691731 gtatttcataatattaagaaacatagacgttggtactgt 42691769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 35392144 - 35392264
Alignment:
Q  87 taacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaag 186  Q
    |||| ||||| | |||| ||| |||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  35392144 taacgcacgggtgatatggaaagtaatatttgacggtaataggtaacaaaatagtttagatgaatatcatgattgtcatatagtattttataatattaag 35392243  T
Q  187 aagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||    
T  35392244 aagcatagacgttggtactgt 35392264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 41290734 - 41290651
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41290734 aatagataacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 41290651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 32720082 - 32719992
Alignment:
Q  113 tatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32720082 tatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatagagtatttcataatattaagaagcatagacgttggta 32719992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 17546621 - 17546728
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgtt 199  Q
    |||| ||| |||||| ||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17546621 atatagaaggtaataattgacggtaataggtaacaaaattgtttagatgaatgttatgattgtcatatagtatttcataatattaagaagtatagacgtt 17546720  T
Q  200 ggtactgt 207  Q
    ||||||||    
T  17546721 ggtactgt 17546728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 25480220 - 25480356
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||| ||||||||||  | || | || | ||| |||||||||| | | ||||||||||||  |||||||||||||||||||||||||||||||    
T  25480220 tagaccatcgatccgtgctaacgtatgggttatctggaaggtaatatttgtcggtaataggtaacaa--tagtttagatgaatgtcatgattgtcatata 25480317  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  25480318 gtatttcatagtattaagaggcatagacgttggtactgt 25480356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 18241401 - 18241498
Alignment:
Q  109 gtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  18241401 gtaatatttgacggtaataggtaacaaaata-tttagatgaatgtcatgattgtgatataatatttcataatattaagaaacatagacgttggtactgt 18241498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 41040987 - 41041081
Alignment:
Q  109 gtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||    
T  41040987 gtaatatttgacggtaataggtaacaaaatagtttaaatgaatgtcataactgtcgtatagtatttcataatattaagaagcatagacattggta 41041081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 3891356 - 3891275
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtact 205  Q
    |||| |||| |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3891356 aataagtaataaaatagtttagatgaatgttataattgtcatatagtatttcgtaatattaagaagcatagacgttggtact 3891275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 22740975 - 22740908
Alignment:
Q  140 gtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| | |||||||||||    
T  22740975 gtttagatgaatgtcatgattgtcatatattattttataatattaagaagtataaatgttggtactgt 22740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 26161623 - 26161553
Alignment:
Q  109 gtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataa 179  Q
    |||||||||||| | ||||  |||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  26161623 gtaatatttgacggtaataaataacaaaatattttagatgaatgttatgattgtcatataatatttcataa 26161553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 5399173 - 5399100
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtt 142  Q
    ||||||||||| || | ||||| |||   |||||||||| |||||||||||| | |||||||||||||||||||    
T  5399173 tagaccatcgatccatactaacgcacacgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 5399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 29380062 - 29379959
Alignment:
Q  104 cgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    |||| |||||||||| ||| || | ||||||||||||||||| |||||||||| |||||  ||    | |||||||||||||  | ||||||| ||||||    
T  29380062 cgaaagtaatatttggcagtaacatgtaacaaaatagtttagttgaatgtcataattgttctaattaaattcataatattaattatcatagacattggta 29379963  T
Q  204 ctgt 207  Q
    ||||    
T  29379962 ctgt 29379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 24539357 - 24539219
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||| |||||||| ||||| |||||| ||| |||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||    
T  24539357 tagaccatcgaccagtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttacatgaatgtcatgatcgtcatata 24539258  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  24539257 gtatttcataatattaagaagcatagactttggtactgt 24539219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 9061612 - 9061476
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||  | |||||| ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  9061612 tagaccatcgacccgtgctaacgcataggtcatatggaatgtaatatttaacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 9061513  T
Q  169 gtatttcataatattaagaagcatagacgttggtact 205  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  9061512 gtatttcataatactaagaagcatagacgttgttact 9061476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 11653576 - 11653712
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||| ||||||||||||||||  ||||| |||||| ||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  11653576 tagatcatcgacccgtgctaatgcacgggtcatatggaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtcatgattgtcatata 11653675  T
Q  169 gtatttcataatattaagaagcatagacgttggtact 205  Q
     |||||||||||||||||| |||||||||||||||||    
T  11653676 atatttcataatattaagatgcatagacgttggtact 11653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 40682128 - 40682266
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||| ||| ||||| ||||||| |||||  ||||||||| ||||||||| || |||||||||||||||||||||||||||||||  |||||||| |||||    
T  40682128 tagatcattgacccatgctaacgcacgggacatatcgaaggtaatatttaacggcaataggtaacaaaatagtttagatgaatgctatgattgttatata 40682227  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40682228 gtatttcataatattaagaagcatagatgttggtactgt 40682266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 4875455 - 4875570
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 191  Q
    ||||| |||||| ||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  4875455 cacgggtcatatggaaggtaatatttgacgttaataggtaacaaaatagtttagatgaatgtcatgattgtcatgtaatatttcataatattaagaagca 4875554  T
Q  192 tagacgttggtactgt 207  Q
    ||||||||||||||||    
T  4875555 tagacgttggtactgt 4875570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 42351183 - 42351074
Alignment:
Q  98 tcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacg 197  Q
    |||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42351183 tcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtcataactgtcatatagtatttcataatattaagaagcatagacg 42351084  T
Q  198 ttggtactgt 207  Q
    ||||||||||    
T  42351083 ttggtactgt 42351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 2527796 - 2527658
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||| |||||||||| |||   |||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||||||| |    
T  2527796 tagaccatcgatccgtgctaacgcacatgtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtcataattgtcataca 2527697  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
     |||||||||||||||||||| ||||| |||||||||||    
T  2527696 atatttcataatattaagaagaatagatgttggtactgt 2527658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 22455225 - 22455093
Alignment:
Q  73 ccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtat 172  Q
    ||||||||||||  |||| || || |||||| ||| |||||||||||| | |||| |||| ||||||||||| ||||||||||| |||||||||||||||    
T  22455225 ccatcgacccgt--taacgcatgggtcatatggaaggtaatatttgacggtaataagtaataaaatagtttaaatgaatgtcataattgtcatatagtat 22455128  T
Q  173 ttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||| |||||||||||||||||||||||||||    
T  22455127 ttcataacattaagaagcatagacgttggtactgt 22455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 54243770 - 54243655
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagca 191  Q
    ||||| |||||| |||  |||||||||||   ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  54243770 cacgggtcatatggaagttaatatttgacgataataggtaacaaaatagtttaaataaatgtcatgattgttatatagtatttcataatattaagaagca 54243671  T
Q  192 tagacgttggtactgt 207  Q
    ||||||||||||||||    
T  54243670 tagacgttggtactgt 54243655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 46420837 - 46420704
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtc--atgattgtcata 166  Q
    ||||||||||| |||||||||  |||   |||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||  || |||||||||    
T  46420837 tagaccatcgatccgtgctaatgcacaagtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatataattgtcata 46420738  T
Q  167 tagtatttcataatattaagaagcatagacgttg 200  Q
    ||||||||||||||||||||||||||| ||||||    
T  46420737 tagtatttcataatattaagaagcataaacgttg 46420704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 23633342 - 23633260
Alignment:
Q  125 ataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23633342 ataggtaacaaaatagtttaaataaatgtcatgattgtcatatagtatttcataatattaagaaccatagacgttggtactgt 23633260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 23633374 - 23633466
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatatta 184  Q
    ||||| ||||| |||| |||||||||||| | ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23633374 cacgggtcataccgaaggtaatatttgacggtaatagataacaaaatagtttaaatgaatgtcatgattttcatatagtatttcataatatta 23633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 48809347 - 48809285
Alignment:
Q  145 gatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48809347 gatgaatttcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 48809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 49357983 - 49357854
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||| | |||||| ||| |||||||||||| | ||||||||| | | || |||||||||||||||||          |    
T  49357983 tagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttgacggtaataggtaaaatagtattttagatgaatgtcatg---------ca 49357893  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49357892 gtatttcataatattaagaagcatagacgttggtactgt 49357854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 1326171 - 1326075
Alignment:
Q  66 aattagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgt 162  Q
    ||||||||||||||||||||||| | ||||  |||||||||| |||||||||||||| || | ||||||||||||||||| |||||||||| |||||    
T  1326171 aattagaccatcgacccgtgctatcgcacgcgtcatatcgaaggtaatatttgacagtaacatgtaacaaaatagtttagttgaatgtcataattgt 1326075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 12758477 - 12758592
Alignment:
Q  84 tgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatatt 183  Q
    |||||||  |||| |||||| ||| |||||||||||| | |||| |||||||||||||||||||||       |||||| ||||||||||||||||||||    
T  12758477 tgctaacgtacgggtcatatggaaggtaatatttgacggtaataagtaacaaaatagtttagatga-------gattgtaatatagtatttcataatatt 12758569  T
Q  184 aagaagcatagacgttggtactgt 207  Q
    ||||| ||||||||||||||||||    
T  12758570 aagaa-catagacgttggtactgt 12758592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 49748220 - 49748300
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatga 149  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||||||||||| | |||||||| |||||||||||||||||    
T  49748220 tagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtagcaaaatagtttagatga 49748300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 49750382 - 49750424
Alignment:
Q  158 attgtcatatagtatttcataatattaagaagcatagacgttg 200  Q
    |||||||| ||||||||||||||||||||||| ||||||||||    
T  49750382 attgtcatttagtatttcataatattaagaagaatagacgttg 49750424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 12590 - 12726
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||    
T  12590 tagaccatcgacccgtgctaatgcacgggtcatatggaatgtaatatttgacggtaataggtaacaaaatagtttaaatgaatgacatgattgtcatata 12689  T
Q  169 gtatttcataatattaagaagcatagacgttggtact 205  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  12690 gtatttcataatattaaaaaggatagacgttggtact 12726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 41842822 - 41842956
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||  ||| | |||||| ||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  41842822 tagaccatcgacccgtgctaatgcacaggtcatatggaaagtaatatctgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 41842921  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||||||||| |||||||||||||    
T  41842922 gtatttcataatattaagaagtatagacgttggta 41842956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 34893026 - 34893164
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||| ||||||||||||| |||   |||||  ||  |||||||||||| | |||||||||||||| |||||| ||||||||||| |||||||||||    
T  34893026 tagaccattgacccgtgctaacgcacaagtcataaggagggtaatatttgacggtaataggtaacaaaacagtttaaatgaatgtcataattgtcatata 34893125  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34893126 gtatttcataatattaagaagcatagacgttggtactgt 34893164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 16913160 - 16913289
Alignment:
Q  79 acccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaa-caaaatagtttagatgaatgtcatgattgtcatatagtatttcat 177  Q
    |||||||||||| ||||| |||||| ||| |||||||||||| | |||| |||| |||||||||||||||||| ||||||||||||||||| ||||| ||    
T  16913160 acccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaatatgtaaacaaaatagtttagatgaaagtcatgattgtcatataatattttat 16913259  T
Q  178 aatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||||    
T  16913260 aatattaagaagcatagacgttggtactgt 16913289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 24255329 - 24255246
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24255329 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacattggtactgt 24255246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 27853820 - 27853903
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27853820 aataggtaacaaaatagtttagatgaatgttatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 27853903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 15096730 - 15096810
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggt-aacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataa 179  Q
    |||||||| |||||||||||  | ||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15096730 atatcgaaggtaatatttgatggtaataggttaaaaaaatagtttagatgaatgtcataattgtcacatagtatttcataa 15096810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 37063971 - 37063913
Alignment:
Q  92 cacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaa 150  Q
    ||||| |||||||||| |||||||||||||  |||| ||||||||||||||||| ||||    
T  37063971 cacgggtcatatcgaaagtaatatttgacaataataagtaacaaaatagtttagttgaa 37063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 45261958 - 45262044
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtca 155  Q
    |||||||| |||||||| ||||  ||   ||||||||| ||||||||||| | | |||||||||||||||||||||| |||| ||||    
T  45261958 tagaccattgacccgtgttaacgtacatgtcatatcgattgtaatatttgtcggtaataggtaacaaaatagtttagctgaaggtca 45262044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 50290428 - 50290294
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||||||||||| | ||||||||  |||||||||||||||||||||||||||||||| ||    
T  50290428 tagaccatcgacccgtgctaacgcacgggtcatatggaacgtaatatttgacggtaataggtagaaaaatagtttagatgaatgtcatgattgtcattta 50290329  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||| |||||||||||||||||||    
T  50290328 gtatttcataatattcagaagcatagacgttggta 50290294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 39268247 - 39268382
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||   ||||||||||||| || |||||||||||||||| |||||||||||    
T  39268247 tagaccatcgacccgcgctaacgcacgggtcatatcgaatgtaatatttgacgataataggtaacaaagtactttagatgaatgtcataattgtcatata 39268346  T
Q  169 gtatttcataatattaagaagcatagacgttggtac 204  Q
    |||||||||||||||||||| |||| ||||||||||    
T  39268347 gtatttcataatattaagaaacataaacgttggtac 39268382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 28946644 - 28946740
Alignment:
Q  111 aatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28946644 aatatttgacggcaataggtaataaaataatttagatgaatgtcatgattgtcatataatatttcataatattaagaagcatagacgttggtactgt 28946740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 21007795 - 21007878
Alignment:
Q  124 aataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggtactgt 207  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21007795 aataggtaataaaatagtttagatcaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttgatactgt 21007878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 52407917 - 52408010
Alignment:
Q  109 gtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  52407917 gtaacatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattg-catatagtatttcataatattaagaagcataaacgttggta 52408010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 43991774 - 43991669
Alignment:
Q  98 tcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacg 197  Q
    |||||| ||||||||||||||||   |||| |||||| ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  43991774 tcatatggaatgtaatatttgacgataataagtaacagaatagtt-agatgaatgtcataattgttatatagtatttcataatattaagaagcatagacg 43991676  T
Q  198 ttggtac 204  Q
    |||||||    
T  43991675 ttggtac 43991669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 45914054 - 45914147
Alignment:
Q  110 taatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatatagtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||  | |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  45914054 taatatttgatggtaataggtaacaaaatattttagataaatgttatgattatcatatagtatttcataatattaagaatcatagacgttggta 45914147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 8998895 - 8998809
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtca 155  Q
    |||||||| ||||||||||||| ||| | ||||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||    
T  8998895 tagaccattgacccgtgctaacgcacaggtcatatcgaatgtaatatttgacggtaataggtaacaaaatagtttagttgaaggtca 8998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 49193134 - 49193217
Alignment:
Q  72 accatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtca 155  Q
    ||||| || |||||||||| ||||  |||||| |||||||||||||||| | |||||||||||||||| ||||| |||||||||    
T  49193134 accattgatccgtgctaacgcacgtgtcatattgaatgtaatatttgacggtaataggtaacaaaataatttagttgaatgtca 49193217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 70 - 204
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||  ||||||| ||||| | |||||||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||||||||||||    
T  70 tagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtcacgattgtcatata 169  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||||||||||||| |||||||||    
T  170 gtatttcataatattaagaagcataaacgttggta 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 236 - 102
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||  ||||||| ||||| | |||||||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||||||||||||    
T  236 tagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtcacgattgtcatata 137  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||||||||||||| |||||||||    
T  136 gtatttcataatattaagaagcataaacgttggta 102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 10147 - 10013
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||  ||||||| ||||| | |||||||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||||||||||||    
T  10147 tagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtcacgattgtcatata 10048  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||||||||||||| |||||||||    
T  10047 gtatttcataatattaagaagcataaacgttggta 10013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 28833 - 28967
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||||||||||||  ||||||| ||||| | |||||||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||||||||||||    
T  28833 tagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtcacgattgtcatata 28932  T
Q  169 gtatttcataatattaagaagcatagacgttggta 203  Q
    ||||||||||||||||||||||||| |||||||||    
T  28933 gtatttcataatattaagaagcataaacgttggta 28967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 8799 - 8938
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    |||| ||||||||| |||||||| |||| | |||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  8799 tagagcatcgacccatgctaacatacggtt-atatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 8897  T
Q  169 gtatttcataatattaagaagc--atagacgttggtactgt 207  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  8898 gtatttcataatattaagaagcatataggcgttggtactgt 8938  T

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Target: scaffold0044 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 87922 - 87784
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcatgattgtcatata 168  Q
    ||||| ||||| || ||||||| ||||  ||||||  ||  ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  87922 tagactatcgatccttgctaacgcacgagtcatatgaaagataatatttgacggtaatatgtaacaaaatagtttagatgaatgtcatgattgtcatata 87823  T
Q  169 gtatttcataatattaagaagcatagacgttggtactgt 207  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  87822 gtatttcaaaatattaagaagcatagacgttggtactgt 87784  T

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Target: scaffold0210 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 17833 - 17760
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtt 142  Q
    |||||||||||||||||||||  ||||  |||| ||||| |||||||||||| | |||| ||||||||||||||    
T  17833 tagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 17760  T

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Target: scaffold0210; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 25725 - 25652
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtt 142  Q
    |||||||||||||||||||||  ||||  |||| ||||| |||||||||||| | |||| ||||||||||||||    
T  25725 tagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 25652  T

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Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 13604 - 13690
Alignment:
Q  69 tagaccatcgacccgtgctaacacacggatcatatcgaatgtaatatttgacagcaataggtaacaaaatagtttagatgaatgtcat 156  Q
    |||||||||||||||||||||| ||| | | ||||||||  || |||||||  | ||||| |||||||||||||||||||| ||||||    
T  13604 tagaccatcgacccgtgctaacgcacaggttatatcgaagata-tatttgatggtaatagataacaaaatagtttagatgattgtcat 13690  T

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Target: scaffold1449 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 216 - 170
Alignment:
Q  100 atatcgaatgtaatatttgacagcaataggtaacaaaatagtttaga 146  Q
    |||| ||| |||||||||||| | |||||||||||||||||||||||    
T  216 atatggaaggtaatatttgacggtaataggtaacaaaatagtttaga 170  T

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