View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10947_high_10 (Length: 249)
Name: NF10947_high_10
Description: NF10947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10947_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 50472860 - 50473096
Alignment:
| Q |
1 |
tatatgcattttgctgtcaaattatataaagaatgcatgtaagcacacacaactttttaacctttgagcgtaaacaaattaaactttatcctccagatct |
100 |
Q |
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| T |
50472860 |
tatatgcattttgctgtcaaattatataaagaatgcatgtaagcacacacaactttttaacctttgagcgtaaacaaattaaactttatcctccagatct |
50472959 |
T |
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| Q |
101 |
tctattatggggttcaaattaaaattttacatcaatcatattctaatatatagctgccagctcacatgcattcaatttctgcagctaaaaacacttgcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
50472960 |
tctattatggggttcaaattaaaattttacatcaatcatattctaatatatagctgccagctcacatgcattcaatttctgcagctaaaaacacttgtaa |
50473059 |
T |
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| Q |
201 |
acagtgaaacaagtgagaaatatgccctcgttatctgtg |
239 |
Q |
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|||||||| | |||||||||||||||||||||||||| |
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| T |
50473060 |
acagtgaagc--ttgagaaatatgccctcgttatctgtg |
50473096 |
T |
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