View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10947_high_3 (Length: 294)
Name: NF10947_high_3
Description: NF10947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10947_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 25241401 - 25241688
Alignment:
| Q |
2 |
ctgatattctaacaagtattcagtatttgaagatcaatgaaatgcattgatttttctttgtaaataaaaacaaaatacattaaccattcagattgacatc |
101 |
Q |
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| T |
25241401 |
ctgatattctaacaagtattcagtatttgaagatcaatgaaatgcattgatttttctttgtaaataaaaacaaaatacattaaccattcacattgacatc |
25241500 |
T |
|
| Q |
102 |
aaaagggatgtatatatataca------------ctcaaaagagtaaatttaaaaggaacattattgtttattgcaagtgcaagtgacatagagatttta |
189 |
Q |
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||||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25241501 |
aaaagggatatatatatatatatatatatatatactcaaaagagtaaatttataaggaacattattgtttattgcaagtgcaagtgacatatagatttta |
25241600 |
T |
|
| Q |
190 |
gttaggtctaataaagtgtggaaaaggagcacatctagaccctactttattctcaattataaatggagaaaagaaaaattgtaccctt |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25241601 |
gttaggtctaataaagtgtggaaaaggagcacatctagaccctactttattctcaattataaatggagaaaagaaaaattgtaccctt |
25241688 |
T |
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