View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10947_high_5 (Length: 285)
Name: NF10947_high_5
Description: NF10947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10947_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 25241248 - 25241520
Alignment:
| Q |
13 |
atgaatggacagtgttaattggtattaagcagcttgatcataatgttatcgagtttggttatgttattatcttgttgttgttgaagagacaagtcaatat |
112 |
Q |
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| T |
25241248 |
atgaatggacagtgttaattggtattaagcagcttgatcataatgttatcgagtttggttatgttattatcttcttgttgttgaagagacaagtcaatat |
25241347 |
T |
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| Q |
113 |
gattgattatttcttaactgagatggttcatgcttattttctnnnnnnnnnntctgatattctaacaagtattcagtatttgaagatcaatgaaatgcat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25241348 |
gattgattatttcttaactgagatggttcatgcttattttctataaaaaaaaactgatattctaacaagtattcagtatttgaagatcaatgaaatgcat |
25241447 |
T |
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| Q |
213 |
tgatttttctttgtaaataaaaacaaaatacattaaccattcagattgacatcaaaagggatgtatatatata |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
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| T |
25241448 |
tgatttttctttgtaaataaaaacaaaatacattaaccattcacattgacatcaaaagggatatatatatata |
25241520 |
T |
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