View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10948_high_1 (Length: 382)

Name: NF10948_high_1
Description: NF10948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10948_high_1
NF10948_high_1
[»] chr8 (51 HSPs)
chr8 (224-364)||(3050918-3051058)
chr8 (6-158)||(3051124-3051276)
chr8 (13-138)||(9054785-9054910)
chr8 (13-154)||(6813691-6813833)
chr8 (229-353)||(3303474-3303596)
chr8 (229-358)||(43036665-43036792)
chr8 (59-152)||(23799571-23799664)
chr8 (226-362)||(12702426-12702562)
chr8 (233-357)||(5689513-5689635)
chr8 (59-152)||(26403224-26403317)
chr8 (58-155)||(28307568-28307665)
chr8 (59-118)||(6127265-6127324)
chr8 (25-104)||(7493133-7493212)
chr8 (63-146)||(19175753-19175835)
chr8 (63-146)||(19752393-19752475)
chr8 (16-89)||(30291620-30291695)
chr8 (59-152)||(5702477-5702570)
chr8 (63-152)||(7412351-7412439)
chr8 (229-270)||(40321318-40321359)
chr8 (233-355)||(41366420-41366539)
chr8 (63-126)||(4456064-4456126)
chr8 (13-120)||(5990509-5990615)
chr8 (63-146)||(31071228-31071310)
chr8 (279-357)||(15213075-15213155)
chr8 (229-358)||(19491502-19491628)
chr8 (225-334)||(44304093-44304201)
chr8 (63-126)||(1261953-1262015)
chr8 (229-313)||(1345221-1345301)
chr8 (229-263)||(6599211-6599245)
chr8 (229-263)||(6674664-6674698)
chr8 (229-319)||(8154024-8154109)
chr8 (229-270)||(18142056-18142097)
chr8 (16-89)||(3303750-3303824)
chr8 (288-357)||(4743027-4743098)
chr8 (16-89)||(18141835-18141908)
chr8 (78-126)||(26287937-26287985)
chr8 (78-126)||(26301194-26301242)
chr8 (78-126)||(26313188-26313236)
chr8 (16-89)||(1292543-1292617)
chr8 (303-358)||(3231645-3231700)
chr8 (63-126)||(18853166-18853229)
chr8 (63-126)||(18870560-18870623)
chr8 (63-126)||(36979413-36979475)
chr8 (16-79)||(40328793-40328857)
chr8 (25-83)||(3772215-3772274)
chr8 (63-120)||(4760074-4760130)
chr8 (95-152)||(9765849-9765906)
chr8 (233-270)||(10015321-10015358)
chr8 (229-270)||(18105960-18106001)
chr8 (14-89)||(42435071-42435147)
chr8 (289-358)||(4731957-4732027)
[»] chr2 (59 HSPs)
chr2 (7-152)||(2837972-2838117)
chr2 (7-152)||(1345483-1345628)
chr2 (13-152)||(2869640-2869780)
chr2 (229-357)||(33162254-33162380)
chr2 (229-357)||(39285077-39285202)
chr2 (59-152)||(13569338-13569431)
chr2 (59-152)||(34388868-34388961)
chr2 (229-357)||(29868111-29868237)
chr2 (229-357)||(42362588-42362713)
chr2 (229-358)||(2838188-2838314)
chr2 (229-358)||(723546-723672)
chr2 (59-146)||(10445438-10445525)
chr2 (229-358)||(34139572-34139698)
chr2 (58-120)||(21629985-21630047)
chr2 (59-152)||(10707246-10707339)
chr2 (229-319)||(11067543-11067629)
chr2 (59-152)||(17865213-17865306)
chr2 (59-152)||(20522230-20522323)
chr2 (59-120)||(31056086-31056147)
chr2 (59-152)||(34682328-34682421)
chr2 (229-357)||(36773800-36773926)
chr2 (229-358)||(36317812-36317939)
chr2 (229-357)||(11151395-11151521)
chr2 (229-361)||(14633624-14633753)
chr2 (13-155)||(15903838-15903979)
chr2 (59-120)||(8390144-8390205)
chr2 (59-152)||(14699002-14699094)
chr2 (38-143)||(27149267-27149372)
chr2 (63-152)||(28259176-28259264)
chr2 (59-120)||(40014967-40015028)
chr2 (231-357)||(2334218-2334341)
chr2 (59-152)||(8040070-8040165)
chr2 (229-268)||(14202310-14202349)
chr2 (59-118)||(33528615-33528674)
chr2 (59-152)||(16940203-16940296)
chr2 (59-152)||(17010868-17010961)
chr2 (229-359)||(36987873-36988001)
chr2 (63-126)||(3491786-3491848)
chr2 (290-358)||(11690787-11690857)
chr2 (63-126)||(25398531-25398593)
chr2 (63-126)||(25403669-25403731)
chr2 (63-126)||(25407658-25407720)
chr2 (13-132)||(28770722-28770841)
chr2 (59-146)||(33118152-33118239)
chr2 (59-146)||(39482947-39483034)
chr2 (229-357)||(24885828-24885953)
chr2 (13-118)||(18674349-18674454)
chr2 (81-126)||(35397548-35397593)
chr2 (16-89)||(11151671-11151745)
chr2 (16-89)||(11690515-11690589)
chr2 (16-89)||(42362366-42362440)
chr2 (225-357)||(6594804-6594934)
chr2 (63-126)||(11098926-11098988)
chr2 (63-126)||(14291524-14291586)
chr2 (14-89)||(723824-723900)
chr2 (63-120)||(9296400-9296456)
chr2 (63-120)||(23078469-23078525)
chr2 (279-354)||(4561359-4561435)
chr2 (16-89)||(14633906-14633980)
[»] chr3 (63 HSPs)
chr3 (12-126)||(21353598-21353712)
chr3 (231-358)||(29196188-29196314)
chr3 (13-132)||(4386865-4386984)
chr3 (229-357)||(9666270-9666396)
chr3 (16-146)||(48438230-48438361)
chr3 (59-152)||(8370471-8370563)
chr3 (59-152)||(18552867-18552960)
chr3 (60-152)||(1736290-1736382)
chr3 (67-155)||(25929435-25929522)
chr3 (59-146)||(25795797-25795884)
chr3 (229-358)||(44700283-44700409)
chr3 (229-357)||(27305519-27305641)
chr3 (5-146)||(37466307-37466448)
chr3 (59-152)||(21711233-21711325)
chr3 (63-152)||(27974941-27975029)
chr3 (59-152)||(30709774-30709867)
chr3 (59-152)||(36029103-36029196)
chr3 (63-146)||(16264366-16264448)
chr3 (229-358)||(23391711-23391838)
chr3 (229-357)||(21350811-21350933)
chr3 (59-152)||(1417475-1417567)
chr3 (59-152)||(3715986-3716079)
chr3 (67-108)||(25929365-25929406)
chr3 (59-152)||(40592766-40592859)
chr3 (7-122)||(3328288-3328403)
chr3 (290-359)||(29813361-29813432)
chr3 (229-358)||(22834806-22834932)
chr3 (59-126)||(26299024-26299091)
chr3 (63-146)||(32143337-32143419)
chr3 (229-358)||(39153163-39153290)
chr3 (59-146)||(40844668-40844754)
chr3 (78-152)||(27986449-27986523)
chr3 (225-267)||(32744335-32744377)
chr3 (63-120)||(6794702-6794758)
chr3 (229-358)||(761087-761212)
chr3 (59-107)||(3323675-3323722)
chr3 (59-107)||(8126685-8126733)
chr3 (78-146)||(33386669-33386737)
chr3 (17-108)||(35925534-35925625)
chr3 (63-126)||(26928590-26928652)
chr3 (63-146)||(27452974-27453056)
chr3 (16-89)||(32891117-32891192)
chr3 (288-358)||(32891388-32891459)
chr3 (15-89)||(32744516-32744590)
chr3 (229-270)||(23410216-23410257)
chr3 (59-120)||(24695148-24695209)
chr3 (229-270)||(31314683-31314724)
chr3 (59-120)||(47923890-47923951)
chr3 (16-89)||(22835082-22835156)
chr3 (16-89)||(39153441-39153515)
chr3 (63-126)||(2671585-2671647)
chr3 (63-126)||(7167280-7167342)
chr3 (63-126)||(8477398-8477460)
chr3 (63-126)||(8739062-8739124)
chr3 (63-126)||(9091300-9091362)
chr3 (14-79)||(9666556-9666623)
chr3 (229-358)||(29811110-29811238)
chr3 (16-89)||(34491226-34491300)
chr3 (63-126)||(40372794-40372856)
chr3 (16-89)||(46860488-46860562)
chr3 (63-120)||(1305990-1306046)
chr3 (16-89)||(760861-760935)
chr3 (78-146)||(39039995-39040063)
[»] chr6 (27 HSPs)
chr6 (7-146)||(14521690-14521828)
chr6 (27-138)||(31076903-31077014)
chr6 (59-152)||(5572235-5572328)
chr6 (59-152)||(10077159-10077252)
chr6 (229-358)||(14521477-14521607)
chr6 (63-152)||(5757477-5757565)
chr6 (63-152)||(21356046-21356134)
chr6 (59-120)||(31086467-31086528)
chr6 (60-152)||(31979523-31979615)
chr6 (60-118)||(4629998-4630056)
chr6 (60-126)||(21801339-21801405)
chr6 (59-120)||(22963741-22963802)
chr6 (59-120)||(23824591-23824652)
chr6 (233-319)||(3038766-3038849)
chr6 (59-155)||(24435965-24436061)
chr6 (62-145)||(18232862-18232945)
chr6 (229-269)||(33160236-33160276)
chr6 (78-126)||(22709054-22709102)
chr6 (78-146)||(31936603-31936671)
chr6 (16-89)||(2973019-2973093)
chr6 (16-89)||(5043641-5043715)
chr6 (288-319)||(5406042-5406073)
chr6 (288-319)||(5410367-5410398)
chr6 (63-126)||(5674769-5674831)
chr6 (16-84)||(17763004-17763073)
chr6 (229-270)||(33211074-33211115)
chr6 (16-52)||(16569047-16569083)
[»] chr7 (55 HSPs)
chr7 (13-152)||(28617173-28617312)
chr7 (13-146)||(5817218-5817350)
chr7 (229-357)||(41317238-41317364)
chr7 (229-357)||(47675936-47676062)
chr7 (63-152)||(2580400-2580488)
chr7 (15-155)||(3047261-3047402)
chr7 (59-152)||(33332444-33332537)
chr7 (229-319)||(36146251-36146338)
chr7 (229-358)||(14069632-14069759)
chr7 (229-358)||(14379660-14379787)
chr7 (15-152)||(29159813-29159951)
chr7 (59-152)||(2647690-2647783)
chr7 (63-152)||(9190007-9190095)
chr7 (229-357)||(19502421-19502547)
chr7 (59-152)||(55958-56050)
chr7 (59-152)||(20284099-20284191)
chr7 (59-152)||(23403008-23403100)
chr7 (229-359)||(23555283-23555412)
chr7 (59-152)||(46516304-46516397)
chr7 (229-358)||(18126888-18127016)
chr7 (78-152)||(9185178-9185252)
chr7 (63-152)||(21983294-21983384)
chr7 (60-118)||(49091705-49091763)
chr7 (229-270)||(30024641-30024682)
chr7 (237-319)||(24525345-24525424)
chr7 (59-126)||(35960852-35960919)
chr7 (229-358)||(47673743-47673870)
chr7 (230-357)||(26417559-26417685)
chr7 (229-357)||(31105200-31105322)
chr7 (229-357)||(31519133-31519258)
chr7 (63-125)||(44848683-44848744)
chr7 (288-358)||(4586459-4586531)
chr7 (230-270)||(8153581-8153621)
chr7 (59-154)||(4796661-4796756)
chr7 (229-324)||(495822-495913)
chr7 (225-334)||(23564893-23564995)
chr7 (229-357)||(38671025-38671150)
chr7 (63-120)||(18413681-18413737)
chr7 (14-89)||(41649091-41649166)
chr7 (63-126)||(1533443-1533505)
chr7 (63-126)||(2058001-2058063)
chr7 (16-89)||(2361052-2361126)
chr7 (63-126)||(18408799-18408861)
chr7 (63-126)||(21639844-21639906)
chr7 (63-152)||(21988918-21989006)
chr7 (16-80)||(24525985-24526051)
chr7 (16-89)||(29608751-29608825)
chr7 (229-353)||(43864486-43864609)
chr7 (16-89)||(48599414-48599488)
chr7 (229-357)||(1113895-1114021)
chr7 (233-319)||(29991299-29991382)
chr7 (14-89)||(2390294-2390370)
chr7 (288-357)||(31732768-31732839)
chr7 (16-89)||(38671302-38671376)
chr7 (279-356)||(48489720-48489798)
[»] chr1 (55 HSPs)
chr1 (15-154)||(17345469-17345607)
chr1 (229-357)||(13137780-13137906)
chr1 (59-152)||(19072938-19073031)
chr1 (59-152)||(19120828-19120921)
chr1 (59-146)||(27104366-27104453)
chr1 (59-155)||(22819435-22819532)
chr1 (229-357)||(45644158-45644284)
chr1 (13-109)||(9023787-9023883)
chr1 (229-358)||(28223220-28223347)
chr1 (59-152)||(47703930-47704023)
chr1 (59-146)||(16124510-16124597)
chr1 (229-358)||(28220025-28220152)
chr1 (229-357)||(196710-196835)
chr1 (229-357)||(1833751-1833876)
chr1 (59-152)||(47098819-47098911)
chr1 (229-319)||(50167019-50167105)
chr1 (60-152)||(29651821-29651913)
chr1 (230-356)||(30476247-30476371)
chr1 (77-152)||(775682-775757)
chr1 (229-358)||(4552447-4552574)
chr1 (233-358)||(23555070-23555192)
chr1 (63-146)||(32889455-32889537)
chr1 (63-152)||(3281718-3281806)
chr1 (59-152)||(9476271-9476364)
chr1 (59-152)||(13598408-13598501)
chr1 (63-152)||(26644896-26644984)
chr1 (231-357)||(833970-834093)
chr1 (233-358)||(40122000-40122122)
chr1 (230-269)||(46065156-46065195)
chr1 (229-357)||(28265359-28265484)
chr1 (229-358)||(41361153-41361279)
chr1 (229-358)||(8550583-8550710)
chr1 (16-89)||(8550867-8550941)
chr1 (60-152)||(47102837-47102928)
chr1 (63-126)||(21536568-21536630)
chr1 (63-126)||(24202768-24202830)
chr1 (229-358)||(31659480-31659607)
chr1 (233-319)||(3846960-3847045)
chr1 (279-358)||(37559663-37559744)
chr1 (63-120)||(13604622-13604678)
chr1 (63-120)||(19358842-19358898)
chr1 (63-120)||(19361431-19361487)
chr1 (63-120)||(19380071-19380127)
chr1 (229-270)||(50169099-50169140)
chr1 (60-108)||(48382476-48382524)
chr1 (279-357)||(927785-927862)
chr1 (229-263)||(3189573-3189607)
chr1 (229-263)||(3198390-3198424)
chr1 (229-263)||(3207229-3207263)
chr1 (13-123)||(11032268-11032378)
chr1 (14-89)||(40122278-40122354)
chr1 (14-89)||(47255420-47255496)
chr1 (231-267)||(16455861-16455897)
chr1 (59-95)||(40816808-40816844)
chr1 (27-89)||(46064943-46065006)
[»] chr5 (40 HSPs)
chr5 (16-155)||(11181782-11181923)
chr5 (13-146)||(33030888-33031021)
chr5 (229-357)||(28750455-28750581)
chr5 (59-152)||(10281761-10281854)
chr5 (16-118)||(3880343-3880446)
chr5 (59-146)||(28832275-28832361)
chr5 (13-127)||(6741887-6742001)
chr5 (229-357)||(13488443-13488569)
chr5 (63-152)||(9353331-9353419)
chr5 (63-152)||(36932349-36932437)
chr5 (59-152)||(42127405-42127497)
chr5 (229-355)||(538263-538387)
chr5 (229-343)||(42428244-42428356)
chr5 (229-358)||(5887234-5887360)
chr5 (229-358)||(42426034-42426161)
chr5 (58-152)||(11916965-11917059)
chr5 (229-360)||(30682719-30682849)
chr5 (229-358)||(31183216-31183342)
chr5 (229-319)||(13239994-13240080)
chr5 (63-152)||(15464542-15464630)
chr5 (60-120)||(19588788-19588848)
chr5 (229-355)||(32637066-32637190)
chr5 (241-358)||(534013-534128)
chr5 (27-146)||(2630247-2630366)
chr5 (25-120)||(7160863-7160958)
chr5 (60-118)||(12084171-12084228)
chr5 (229-319)||(16649674-16649760)
chr5 (229-270)||(37439384-37439425)
chr5 (229-270)||(42927135-42927176)
chr5 (63-126)||(38192209-38192271)
chr5 (63-126)||(38219434-38219496)
chr5 (14-89)||(33831692-33831768)
chr5 (59-120)||(24553502-24553561)
chr5 (63-152)||(31300595-31300683)
chr5 (229-264)||(8565841-8565876)
chr5 (63-126)||(24135884-24135946)
chr5 (76-119)||(28537669-28537712)
chr5 (225-357)||(39468348-39468479)
chr5 (279-358)||(3075548-3075629)
chr5 (229-319)||(33831921-33832007)
[»] chr4 (50 HSPs)
chr4 (16-155)||(39774255-39774395)
chr4 (59-152)||(16623287-16623380)
chr4 (16-137)||(18377384-18377506)
chr4 (25-155)||(1983260-1983390)
chr4 (229-357)||(26175436-26175562)
chr4 (59-152)||(10047389-10047482)
chr4 (59-152)||(36315224-36315316)
chr4 (59-152)||(36329433-36329525)
chr4 (59-155)||(5112244-5112340)
chr4 (229-358)||(5872060-5872184)
chr4 (59-126)||(16630674-16630741)
chr4 (64-127)||(34495822-34495885)
chr4 (229-358)||(46147194-46147321)
chr4 (233-357)||(36463196-36463317)
chr4 (62-152)||(39246004-39246094)
chr4 (237-358)||(45686986-45687105)
chr4 (63-152)||(3777559-3777647)
chr4 (63-152)||(5396670-5396758)
chr4 (59-120)||(3796513-3796574)
chr4 (229-358)||(12743727-12743851)
chr4 (229-270)||(36994761-36994802)
chr4 (59-152)||(38152433-38152526)
chr4 (232-357)||(48893443-48893565)
chr4 (288-358)||(5350199-5350269)
chr4 (232-358)||(12739352-12739473)
chr4 (13-119)||(37781905-37782011)
chr4 (224-357)||(31474384-31474512)
chr4 (63-152)||(31985633-31985720)
chr4 (229-360)||(47038213-47038341)
chr4 (78-126)||(28468542-28468590)
chr4 (59-119)||(42599567-42599626)
chr4 (59-146)||(24333825-24333912)
chr4 (253-358)||(4588218-4588321)
chr4 (59-120)||(6743409-6743470)
chr4 (14-89)||(24969124-24969200)
chr4 (229-270)||(29254736-29254777)
chr4 (78-146)||(5269204-5269272)
chr4 (229-358)||(9927257-9927385)
chr4 (291-355)||(53345480-53345544)
chr4 (16-89)||(379394-379468)
chr4 (224-318)||(6542027-6542114)
chr4 (16-89)||(12073406-12073480)
chr4 (63-126)||(24741976-24742038)
chr4 (63-126)||(29760677-29760739)
chr4 (16-84)||(45687267-45687337)
chr4 (16-89)||(52467434-52467508)
chr4 (25-127)||(39593764-39593864)
chr4 (279-358)||(52082462-52082542)
chr4 (63-152)||(5147687-5147776)
chr4 (14-89)||(46147471-46147547)
[»] scaffold0148 (1 HSPs)
scaffold0148 (58-152)||(10739-10833)
[»] scaffold0140 (1 HSPs)
scaffold0140 (63-152)||(8418-8506)
[»] scaffold0087 (1 HSPs)
scaffold0087 (63-152)||(43960-44048)
[»] scaffold0006 (3 HSPs)
scaffold0006 (59-152)||(5693-5786)
scaffold0006 (59-152)||(2502-2595)
scaffold0006 (63-120)||(133279-133335)
[»] scaffold0036 (1 HSPs)
scaffold0036 (59-152)||(85693-85785)
[»] scaffold0188 (2 HSPs)
scaffold0188 (63-126)||(17951-18013)
scaffold0188 (63-126)||(24044-24106)
[»] scaffold0176 (1 HSPs)
scaffold0176 (59-118)||(17307-17366)
[»] scaffold0184 (1 HSPs)
scaffold0184 (78-138)||(29506-29566)
[»] scaffold0078 (1 HSPs)
scaffold0078 (78-138)||(43278-43338)
[»] scaffold0236 (1 HSPs)
scaffold0236 (27-73)||(10515-10561)
[»] scaffold0219 (1 HSPs)
scaffold0219 (322-358)||(27249-27285)
[»] scaffold0098 (1 HSPs)
scaffold0098 (86-126)||(45289-45329)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 8e-74; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 224 - 364
Target Start/End: Complemental strand, 3051058 - 3050918
Alignment:
Q  224 aatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051058 aatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt 3050959  T
Q  324 tattggtgtgagatttgagtcccaattcacaacaactgtta 364  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3050958 tattggtgtgagatttgagtcccaattcacaacaactgtta 3050918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 3051276 - 3051124
Alignment:
Q  6 agtgagatgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    ||||| |||||||||||| |||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3051276 agtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 3051177  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggttactaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051176 agaggtgctctctcctccagaggaggttatattagaccgaattgggttactaa 3051124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 9054785 - 9054910
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| ||||||||| || ||||||||||| ||| ||   |||||||||||||||   ||||||||||||||||||||||||||| ||||| ||    
T  9054785 tgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctg 9054884  T
Q  113 ctctctcctccagaggaggttatatt 138  Q
    ||||||||||||||| |||| |||||    
T  9054885 ctctctcctccagagtaggtcatatt 9054910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 6813833 - 6813691
Alignment:
Q  13 tgaaaaatgggcagaaa-ttaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    ||||||||||| ||||| ||||||| |||||||||||||||      ||||||||||||||| | ||||| |||||||||||||| |||||||||||| |    
T  6813833 tgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagct 6813734  T
Q  112 gctctctcctccagaggaggttatattagaccgaattgggtta 154  Q
    ||||||||| | || | |||||||||| ||||||| |||||||    
T  6813733 gctctctcccctagtgtaggttatattggaccgaactgggtta 6813691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 353
Target Start/End: Complemental strand, 3303596 - 3303474
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||    ||||  ||||||| ||||| |||| |||||||||||||  |||  ||    
T  3303596 ctagattagatctaggtgtagttattattgttgttgcttgtgtttgttt----tgatattggttaccactttcctttgctccacacatcatagtttgtat 3303501  T
Q  327 tggtgtgagatttgagtcccaattcac 353  Q
    ||||||||||||||||||| |||||||    
T  3303500 tggtgtgagatttgagtccgaattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 43036665 - 43036792
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tat 326  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||    |||   ||||||||||||| |||| |||||||||||||| ||  |||    
T  43036665 ctagattagatctaggtggtgttgttattgttgttgcttgtgtttactt----tgaaattggttactactttcctttgctccacacatcattttttgtat 43036760  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| |||||| |||||    
T  43036761 tggtgtgagttttgagtccaaattcataacaa 43036792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 23799571 - 23799664
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||||||| |  |||| ||||| ||||||| |||||    
T  23799571 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggt 23799664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 362
Target Start/End: Complemental strand, 12702562 - 12702426
Alignment:
Q  226 tttctagattagatctaggtgt---tgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--t 320  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||| || |||    ||||  ||||||||||||| |||| |||||||||||||  |    
T  12702562 tttctagattagatctaggtgtcgttgttattattgttgttgcttgtgtttactt----tgatattggttactactttcctttgctccacacatcatagt 12702467  T
Q  321 atttattggtgtgagatttgagtcccaattcacaacaactgt 362  Q
     | ||||| |||||  ||||||||| ||||||||||||||||    
T  12702466 ttgtattgatgtga-ttttgagtccgaattcacaacaactgt 12702426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 357
Target Start/End: Original strand, 5689513 - 5689635
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattggt 330  Q
    ||||||| ||| ||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| |||||||||||||  | | |||||||    
T  5689513 attagatttagatgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattggt 5689609  T
Q  331 gtgagatttgagtcccaattcacaaca 357  Q
    ||||  ||||||||  |||||||||||    
T  5689610 gtga-ttttgagtcggaattcacaaca 5689635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 26403224 - 26403317
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||| | |||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  26403224 ctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 26403317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 28307665 - 28307568
Alignment:
Q  58 actaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    |||||||||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||  | |||||| |||| || || ||||||| ||||||||    
T  28307665 actaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgctctcatccccagagtaggtcattttggaccgaactgggttac 28307568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 6127324 - 6127265
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||    
T  6127324 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct 6127265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 7493133 - 7493212
Alignment:
Q  25 agaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattg 104  Q
    |||||||||||| |||||| |||||||| || |  ||||||||| |||||  ||||||||||||||||||||||||||||    
T  7493133 agaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 19175753 - 19175835
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  19175753 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaa 19175835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 19752393 - 19752475
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| | |||  |||| ||||| |||||||    
T  19752393 tttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaa 19752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | |||||||||||||||||||||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 5702477 - 5702570
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||||||||| | |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  5702477 ctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggt 5702570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 7412439 - 7412351
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  7412439 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggt 7412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 40321318 - 40321359
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40321318 ctagattagatctaggtgttgttattattgttgttgcttgtg 40321359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 355
Target Start/End: Complemental strand, 41366539 - 41366420
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattggt 330  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||    ||||  ||||||||||||| |||| |||||||||||||  | | |||||||    
T  41366539 attagatctaggtgttgttattgttgttattgcttgtgtttactt----tgatattggttactactttcctttgctccacacatcatagtttgtattggt 41366444  T
Q  331 gtgagatttgagtcccaattcacaa 355  Q
    ||||  ||||||||| |||||||||    
T  41366443 gtga-ttttgagtccgaattcacaa 41366420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 4456126 - 4456064
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  4456126 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 4456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 5990509 - 5990615
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||   |||| |||| |||||||||||||||| ||   |||||||||||||||   ||||||||||||||||||||||  |||||||||  |    
T  5990509 tgaaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccg 5990607  T
Q  113 ctctctcc 120  Q
    ||||||||    
T  5990608 ctctctcc 5990615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 31071228 - 31071310
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  31071228 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 31071310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 15213075 - 15213155
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||  ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||    
T  15213075 ctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 15213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 19491628 - 19491502
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt-att 327  Q
    ||||||||||| |||||||||||||| |||||||| |||||| || |||    ||||  || ||| |||||| |||| |||||||||||||  ||| |||    
T  19491628 ctagattagatataggtgttgttattgttgttgttacttgtgtttactt----tgatattgattaatactttcctttgctccacacatcatagttttatt 19491533  T
Q  328 ggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||  ||| ||||||||| ||||||||||||    
T  19491532 ggttagagttttgagtccgaattcacaacaa 19491502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 44304093 - 44304201
Alignment:
Q  225 atttctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--ta 321  Q
    |||||||||||||||||||||||||||||| ||| || |||||||    ||||  |||| ||  ||||||||||||| |||| |||||||||||||  ||    
T  44304093 atttctagattagatctaggtgttgttattgttgattattgcttg----tgctcactttaatattggttactactttcctttgctccacacatcatagta 44304188  T
Q  322 tttattggtgtga 334  Q
    | |||||||||||    
T  44304189 tgtattggtgtga 44304201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 1261953 - 1262015
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  1261953 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 1262015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 1345301 - 1345221
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccaca 313  Q
    |||||||||||||||||||| ||||||||||||||| ||||| || |||    ||||  ||||||||||||| |||| |||||||    
T  1345301 ctagattagatctaggtgttattattattgttgttgtttgtgtttactt----tgatattggttactactttcctttgctccaca 1345221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 6599211 - 6599245
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgtt 263  Q
    |||||||||||||||||||||||||||||||||||    
T  6599211 ctagattagatctaggtgttgttattattgttgtt 6599245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 6674664 - 6674698
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgtt 263  Q
    |||||||||||||||||||||||||||||||||||    
T  6674664 ctagattagatctaggtgttgttattattgttgtt 6674698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 8154024 - 8154109
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    |||||||| |||||||| ||||||||||||||||||||||    || || |||||||  || |||||||||| ||||||| ||||||||||    
T  8154024 ctagattacatctaggt-ttgttattattgttgttgcttg----tggttactttgatattgattactactttcctttacttcacacatcat 8154109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 18142056 - 18142097
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  18142056 ctagattagatgtaggtgttgttattattattgttgcttgtg 18142097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3303824 - 3303750
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||| ||| |||||||||||||||  | ||  |||||||||||||||||||||||||| ||||    
T  3303824 aaaatgggtagaaattaagtt-tgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 4743098 - 4743027
Alignment:
Q  288 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||| ||||| |||| |||||||||| ||  |||  ||||||||||||||||||||| |||||||||||    
T  4743098 tggttaccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaaca 4743027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 18141835 - 18141908
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| ||||||||||||||  ||||||||||||  ||| | ||||||||||||||| |||||||||||||||    
T  18141835 aaaatgggtagaaattaggttgt--tctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26287985 - 26287937
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26301242 - 26301194
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26301194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26313236 - 26313188
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26313188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 1292617 - 1292543
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||| ||| |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  1292617 aaaatgggtagaaattaagtt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 3231700 - 3231645
Alignment:
Q  303 tttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||||||||    ||||||||||||||||| |||||| ||||||||||||    
T  3231700 tttactccacacatccaagtttattggtgtgagattagagtccgaattcacaacaa 3231645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 18853166 - 18853229
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  || |||||||||||| |||||||||| |||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccaga 18853229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 18870560 - 18870623
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  || |||||||||||| |||||||||| |||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccaga 18870623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 36979475 - 36979413
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  36979475 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 36979413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 40328793 - 40328857
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagct--cttgtactaatttcttgtaactcattt 79  Q
    |||||||| |||||||||||| |||||||||||||||   ||  ||||||||||||||||||||||    
T  40328793 aaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaaactaatttcttgtaactcattt 40328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 3772215 - 3772274
Alignment:
Q  25 agaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtat 83  Q
    |||||||||||| |||||||||||||||  | ||  |||||||||||||||||||||||||    
T  3772215 agaaattaggtt-tgttctttgtgagcttatttaagctaatttcttgtaactcatttgtat 3772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 4760074 - 4760130
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  4760074 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 4760130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 9765849 - 9765906
Alignment:
Q  95 tagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9765849 tagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 9765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 10015321 - 10015358
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  10015321 attagatctaggtattgttattattgtttttgcttgtg 10015358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 18106001 - 18105960
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  18106001 ctagattagatctaggtgatgttattgttgttattgcttgtg 18105960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 42435147 - 42435071
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||| | |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  42435147 gaaaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 42435071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 4731957 - 4732027
Alignment:
Q  289 ggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||||| |||| |||||||||||||| ||  |||||||||||  ||||||| | ||||||||||||    
T  4731957 ggttactactttcctttgctccacacatcattgtttgtattggtgtga-ttttgagttcgaattcacaacaa 4732027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 2837972 - 2838117
Alignment:
Q  7 gtgagatgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattgga 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2837972 gtgacatgaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcattttagtggattgga 2838071  T
Q  107 gaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    || ||||||||||| |||||| |||| ||||| ||||||| |||||    
T  2838072 gatgtgctctctcccccagagtaggtcatattggaccgaactgggt 2838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 1345483 - 1345628
Alignment:
Q  7 gtgagatgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatctt-agtggattgg 105  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||    
T  1345483 gtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgcaactcatttgtatcactttcatcttaagtggatcgg 1345581  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| |||||| |||| ||||| ||||||| |||||    
T  1345582 agaggtgctctctcccccagagtaggtcatattggaccgaactgggt 1345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 2869640 - 2869780
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgt-gttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  2869640 tgaaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagct 2869739  T
Q  112 gctctctcctccagaggaggttatattagaccgaattgggt 152  Q
     |||||||| | |||| |||| ||||| ||||||| |||||    
T  2869740 actctctcccctagagtaggtcatattggaccgaactgggt 2869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 33162380 - 33162254
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  33162380 ctagattagatctaggtgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtat 33162284  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    || |||||  ||||||||| |||||||||||    
T  33162283 tgatgtga-ttttgagtccgaattcacaaca 33162254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 39285077 - 39285202
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt-tatt 327  Q
    ||||||||||||||||||||||||||||||||||||||||    || || ||||||   |||||||||||||||||| |||||||||||||  || ||||    
T  39285077 ctagattagatctaggtgttgttattattgttgttgcttg----tgtttactttgaaattggttactacttttctttgctccacacatcatagttgtatt 39285172  T
Q  328 ggtgtgagatttgagtcccaattcacaaca 357  Q
    ||| |||| ||| ||||| |||||||||||    
T  39285173 ggtatgagttttaagtccgaattcacaaca 39285202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 13569431 - 13569338
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  13569431 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 13569338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 34388961 - 34388868
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| | |||||||| |||||  |||| ||||| |||||||||||||    
T  34388961 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggt 34388868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 29868111 - 29868237
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || || |||| |   || ||||||||||||||| |||||||||||||  | | |||    
T  29868111 ctagattagatctaggtgttgttattattgttgttgcttg----tgtttactttaaaattgattactacttttctttgctccacacatcatagtttgtat 29868206  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    || ||||| |||||||||| |||||||||||    
T  29868207 tgctgtgaaatttgagtccgaattcacaaca 29868237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 42362588 - 42362713
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||     | |  |||||||| ||||||||||||| |||| |||||||||||||  | | |||    
T  42362588 ctagattagatctaggtgttgttattattgttgttgcttg----agttcactttgattttggttactactttcctttgctccacacatcatagtttgtat 42362683  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||||||| |||||||||||    
T  42362684 tggtgtga-ttttgagtccgaattcacaaca 42362713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 2838188 - 2838314
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattat-ttatt 327  Q
    |||||||| ||||||||||||||||| ||||||||| ||||| || |||    |||| |||||||||||||| |||||||||||||||||   | |||||    
T  2838188 ctagattatatctaggtgttgttattgttgttgttgtttgtgtttactt----tgatagtggttactactttcctttactccacacatcaaagtattatt 2838283  T
Q  328 ggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||| |||| |||| || |||||||||    
T  2838284 ggtgtgagttttgtgtccgaactcacaacaa 2838314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 723672 - 723546
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||||||||| |||    || |  |||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  723672 ctagattagatctaggtgttgttattattgttgttgattg----tgttcactttgatattggttactactttcctttgctccacacatcatagtttgtat 723577  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| ||||||||||||    
T  723576 tggtgtga-ttttgagtccgaattcacaacaa 723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 10445438 - 10445525
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  10445438 ctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 10445525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 34139698 - 34139572
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||| ||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  34139698 ctagattagatctaggtcttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccacacatcatagtttgtat 34139603  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| ||||||||||||    
T  34139602 tggtgtga-ttttgagtccgaattcacaacaa 34139572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 21630047 - 21629985
Alignment:
Q  58 actaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  21630047 actaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcc 21629985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 10707246 - 10707339
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| || ||||||| ||| |  |||| ||||| ||||||| |||||    
T  10707246 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggt 10707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 11067543 - 11067629
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| |||||||||||||    
T  11067543 ctagattagatctaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccacacatcat 11067629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 17865306 - 17865213
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||| ||| |||||    
T  17865306 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggt 17865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 20522323 - 20522230
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| | |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  20522323 ctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggt 20522230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 31056147 - 31056086
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  31056147 ctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcc 31056086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 34682328 - 34682421
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||| |||||  | || ||||| ||||||| |||||    
T  34682328 ctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggt 34682421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 36773800 - 36773926
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||||||||||||    ||| | ||||||||  |||||||||||||  ||| |||||||||||||  | | |||    
T  36773800 ctagattagatctaggtgttgttattattgttgttgctt---cttgttggctttgatattggttactactttcatttgctccacacatcatagtttgtat 36773896  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||| ||| |||||||||||    
T  36773897 tggtgtga-ttttgaatccgaattcacaaca 36773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 36317939 - 36317812
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tat 326  Q
    |||||||| ||||||||||||||||||||| |||||||||    || || ||||||   |||||||||||||  |||  || |||||||||| ||  |||    
T  36317939 ctagattaaatctaggtgttgttattattgctgttgcttg----tgtttactttgaaattggttactactttcatttgttctacacatcattgtttgtat 36317844  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| ||||||||||||    
T  36317843 tggtgtgagttttgagtccaaattcacaacaa 36317812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 11151521 - 11151395
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||| ||||||||||||||||||||||||    || |  |||||||  || ||||||||||| ||| |||||||||||||  | | |||    
T  11151521 ctagattagatctagctgttgttattattgttgttgcttg----tgttcactttgatattgattactacttttatttgctccacacatcatagtttgtat 11151426  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    |||| |||| ||||||| | |||||||||||    
T  11151425 tggtatgagttttgagttcgaattcacaaca 11151395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 14633753 - 14633624
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| || ||||||||||  | | |||    
T  14633753 ctagattagatctaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgcttcacacatcatagtttgtat 14633658  T
Q  327 tggtgtgagatttgagtcccaattcacaacaactg 361  Q
    ||||||||  ||||||||  || ||||||||||||    
T  14633657 tggtgtga-ttttgagtctgaaatcacaacaactg 14633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 15903838 - 15903979
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| |||||||||  | |||||||||||||||  |   ||| ||||||||||| | ||||||||||||| ||||||||||||||||||  |     
T  15903838 tgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagatttt 15903936  T
Q  113 ctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||  ||||| |||| ||||| || |||| | ||||||    
T  15903937 ctctctccgtcagagtaggtcatattggatcgaactaggttac 15903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 8390144 - 8390205
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| ||| || |||||||||| ||||||||||||||| ||||||||||    
T  8390144 ctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcc 8390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 14699002 - 14699094
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  14699002 ctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 14699094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 27149267 - 27149372
Alignment:
Q  38 tgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatat 137  Q
    ||||||||||||||| ||    ||||||||||| || | ||||||||||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||    
T  27149267 tgttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatat 27149366  T
Q  138 tagacc 143  Q
    | ||||    
T  27149367 tggacc 27149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 28259176 - 28259264
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  28259176 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggt 28259264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 40015028 - 40014967
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| | || |||||||    
T  40015028 ctaatttctcgcaactcatttgtatcactttcatcttagtggattggagggatgttctctcc 40014967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 357
Target Start/End: Complemental strand, 2334341 - 2334218
Alignment:
Q  231 agattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattg 328  Q
    ||||||||||||||||||||||||||||||||||||||    || || ||||||   ||||||||||||| |||| || ||||||||||  | | |||||    
T  2334341 agattagatctaggtgttgttattattgttgttgcttg----tgtttactttgaaattggttactactttcctttgcttcacacatcatagtttgtattg 2334246  T
Q  329 gtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||  ||||||||  |||||||||||    
T  2334245 gtgtga-ttttgagtctgaattcacaaca 2334218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 8040165 - 8040070
Alignment:
Q  59 ctaatttcttgtaactca--tttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||   |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||| ||| |||||    
T  8040165 ctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggt 8040070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 14202349 - 14202310
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14202349 ctagattagatctaggtgttgttattattgttgttgcttg 14202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 33528615 - 33528674
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||||||    
T  33528615 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctct 33528674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 16940203 - 16940296
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||| || |||||| |||||||||| ||||||||||||| | || ||| ||| |||||  | || ||||| |||||||||||||    
T  16940203 ctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggt 16940296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 17010868 - 17010961
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||| || |||||| |||||||||| ||||||||||||| | || ||| ||| |||||  | || ||||| |||||||||||||    
T  17010868 ctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggt 17010961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 359
Target Start/End: Complemental strand, 36988001 - 36987873
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tattta 325  Q
    |||||||||||||||||||||||||| ||| || ||||||||| || |||    |||   ||||||||||||| |||| |||||||||||||  | | ||    
T  36988001 ctagattagatctaggtgttgttattgttgattattgcttgtgtttactt----tgaaattggttactactttcctttgctccacacatcatagtttgta 36987906  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaac 359  Q
    |||||||||  ||||||||| |||||||||||||    
T  36987905 ttggtgtga-ttttgagtccgaattcacaacaac 36987873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 3491848 - 3491786
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  3491848 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 3491786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 11690787 - 11690857
Alignment:
Q  290 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  11690787 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 11690857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25398593 - 25398531
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25398593 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25398531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25403731 - 25403669
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25403731 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25407720 - 25407658
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25407720 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25407658  T

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Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 28770722 - 28770841
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| |||||||||  | ||||||||||||||| ||   ||||||||||||||    ||||||||| | | ||| ||| |||| |||||| ||    
T  28770722 tgaaaaatgggtagaaattagagtttgttctttgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcgtagaggatcggagagctg 28770821  T
Q  113 ctctctcctccagaggaggt 132  Q
    |||| |||||||||| ||||    
T  28770822 ctctatcctccagagtaggt 28770841  T

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Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 33118239 - 33118152
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||  |||||| | |||||||| ||||||||||||| | |||||||||| ||| |  |||| ||||| |||||||    
T  33118239 ctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaa 33118152  T

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Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 39483034 - 39482947
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| |||||| || ||||||| |||||||||||||   |||||||||| ||| |  |||| ||||| |||||||    
T  39483034 ctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaa 39482947  T

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Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 24885828 - 24885953
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||| ||||||||| ||||    || |  |||||||  ||||||||| ||| |||| || ||||||||||  | | |||    
T  24885828 ctagattagatctaggtgttgttatcattgttgtttcttg----tgttcactttgatattggttactattttcctttgctacacacatcatagtttgtat 24885923  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||||||| |||||||||||    
T  24885924 tggtgtga-ttttgagtccgaattcacaaca 24885953  T

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Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 18674349 - 18674454
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||  |||||||| | | ||||||||||||||| ||  |||||||||||||||| | || |||||||| |  || |||| ||| |||||| ||    
T  18674349 tgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcactcttgtcatagtagatcggagagctg 18674448  T
Q  113 ctctct 118  Q
    ||||||    
T  18674449 ctctct 18674454  T

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Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 35397593 - 35397548
Alignment:
Q  81 tatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||    
T  35397593 tatcactttcatcttagtggattgaagagctgctatctcctccaga 35397548  T

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Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 11151745 - 11151671
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| ||||||||| || |||||||||||||||  | ||  ||||||||||||||| |||||||||||||||    
T  11151745 aaaatgggtagaaattagatt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

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Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  11690515 aaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

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Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  42362366 aaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

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Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 6594934 - 6594804
Alignment:
Q  225 atttctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--ta 321  Q
    |||||||||||||||||||||| ||||||| ||| || || |||||| |  |||    ||||  ||||||||||||| |||| |||||||||||||  |     
T  6594934 atttctagattagatctaggtgctgttattgttgattattacttgtgttcactt----tgatattggttactactttactttgctccacacatcatagtt 6594839  T
Q  322 tttattggtgtgagatttgagtcccaattcacaaca 357  Q
    | |||||||||||  ||||||||| |||||||||||    
T  6594838 tgtattggtgtga-ttttgagtccaaattcacaaca 6594804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 11098926 - 11098988
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  11098926 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 11098988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 14291586 - 14291524
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  14291586 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 14291524  T

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Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 723900 - 723824
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||| |||| |||||||||||| |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  723900 gaaaactgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

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Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 9296400 - 9296456
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  9296400 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 9296456  T

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Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 23078469 - 23078525
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| ||| || |||||||||| ||||||||||||||| || |||||||    
T  23078469 tttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttctctcc 23078525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 4561359 - 4561435
Alignment:
Q  279 ctttgattgtggttactacttttctttact-ccacacatcattatttattggtgtgagatttgagtcccaattcaca 354  Q
    |||||||  ||||||||||||||||||  | |||||||||    ||||||||||||||||||||||||  |||||||    
T  4561359 ctttgatattggttactacttttcttttgttccacacatctaagtttattggtgtgagatttgagtccatattcaca 4561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 14633980 - 14633906
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  14633980 aaaatgggtagaaattaggat-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

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Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 21353712 - 21353598
Alignment:
Q  12 atgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21353712 atgaaaaatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 21353613  T
Q  112 gctctctcctccaga 126  Q
    |||||||||| ||||    
T  21353612 gctctctccttcaga 21353598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 29196314 - 29196188
Alignment:
Q  231 agattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattg 328  Q
    ||||||||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| |||||||||||||  | | |||||    
T  29196314 agattagatctaggtgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattg 29196218  T
Q  329 gtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||||||||||| ||||||||||||    
T  29196217 gtgtgagatttgagtccgaattcacaacaa 29196188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 4386865 - 4386984
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||| | |||||||||||| ||||||||||||||| ||   ||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||    
T  4386865 tgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctg 4386964  T
Q  113 ctctctcctccagaggaggt 132  Q
    |||||||| |||||| ||||    
T  4386965 ctctctcccccagagtaggt 4386984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 9666396 - 9666270
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||   ||||||||||  ||||||||||||| |||| ||||||| |||||  | | |||    
T  9666396 ctagattagatctaggtgttgttattattgtagttgcttgttat---ttgctttgatattggttactactttcctttgctccacagatcatagtttgtat 9666300  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||||||| |||||||||||    
T  9666299 tggtgtga-ttttgagtccgaattcacaaca 9666270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 48438361 - 48438230
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctt-tgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||| |||||||||||  ||||||| ||| ||||  | | ||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  48438361 aaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 48438262  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  48438261 ctctcccccagattaggtcatattggaccgaa 48438230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 8370471 - 8370563
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  8370471 ctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 8370563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 18552867 - 18552960
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  18552867 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 18552960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 1736290 - 1736382
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  1736290 taatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 1736382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 25929435 - 25929522
Alignment:
Q  67 ttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||| ||||  |||| ||||||| ||||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctc-cccccagagtaggtcgtattggaccgaactgggttac 25929522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 25795884 - 25795797
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| || ||| ||||||||||||||| |||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  25795884 ctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaa 25795797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 44700409 - 44700283
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||    ||||  |||||||||||||||||| |||||  ||||||  | | |||    
T  44700409 ctagattagatctaggtgttgttattattgttgttgcttgtgtttactt----tgatattggttactacttttctttgctccatgcatcatagtttgtat 44700314  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| |||||| |||||    
T  44700313 tggtgtga-ttttgagtccgaattcaaaacaa 44700283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 27305641 - 27305519
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatttattg 328  Q
    ||||||||||||||||| | |||||| ||||||||||||||   || || |||||||  ||||||||||||| |||| |||||||||||||  |||||||    
T  27305641 ctagattagatctaggt-tggttattgttgttgttgcttgt---tg-ttactttgatattggttactactttcctttgctccacacatcatagtttattg 27305547  T
Q  329 gtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||  ||||||||| |||||||||||    
T  27305546 gtgtga-ttttgagtccgaattcacaaca 27305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 37466448 - 37466307
Alignment:
Q  5 gagtgagatgaaaaatgggcagaaattaggttgtgttcttt-gtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggatt 103  Q
    |||||| |||||||||||| ||||||||||   |||||||| || ||||  |  | ||||||||||||||||||| ||| ||||||||||||||||||||    
T  37466448 gagtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggatt 37466350  T
Q  104 ggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||| | | |||||||| |||||  |||| ||||| |||||||    
T  37466349 ggagggctactctctcccccagattaggtcatattggaccgaa 37466307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 21711325 - 21711233
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  21711325 ctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggt 21711233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 27974941 - 27975029
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  27974941 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 27975029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 30709774 - 30709867
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  30709774 ctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 30709867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 36029196 - 36029103
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||| ||||| |||||  |||| ||||| ||| ||| |||||    
T  36029196 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggt 36029103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 16264448 - 16264366
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  16264448 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 16264366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 23391838 - 23391711
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||| ||||    || |  |||||||  |||||| |||||| |||| |||||||||||||  | | |||    
T  23391838 ctagattagatctaggtgttgttattattgttgtttcttg----tgttcactttgatattggttattactttccttttctccacacatcatagtttgtat 23391743  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| |||| || | ||||||||||||    
T  23391742 tggtgtgagttttgtgttcgaattcacaacaa 23391711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 21350933 - 21350811
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt-att 327  Q
    |||||||||||||| ||||||||||| ||||||||     ||  || || |||||||  ||||||||||||| |||| || |||||||| |||||| |||    
T  21350933 ctagattagatctaagtgttgttattgttgttgtt-----tg--tgtttactttgatattggttactactttcctttgcttcacacatctttatttcatt 21350841  T
Q  328 ggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||| ||||||||| |||||||||||    
T  21350840 ggtgtgagttttgagtccgaattcacaaca 21350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 1417475 - 1417567
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||| ||||||||| ||| ||||||| |||||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  1417475 ctaatttcttataactcatt-gtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggt 1417567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 3715986 - 3716079
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| |||| |||||||||| |||||||||  | |||  |||| ||||| ||||||| |||||    
T  3715986 ctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggt 3716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 25929365 - 25929406
Alignment:
Q  67 ttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggaga 25929406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 40592766 - 40592859
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| |||| |||||||||| | ||||||||  ||||  |||| ||||| ||||||| |||||    
T  40592766 ctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggt 40592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 3328288 - 3328403
Alignment:
Q  7 gtgagatgaaaaatgggcagaaattaggttgtgttcttt-gtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| |||||||||||| ||||||||||   |||||||| || ||||  |   |||||||||||||||||||| ||| |||||||||||||||||||||     
T  3328288 gtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattga 3328386  T
Q  106 agaggtgctctctcctc 122  Q
    || | ||||||||||||    
T  3328387 agggctgctctctcctc 3328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 29813361 - 29813432
Alignment:
Q  290 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaac 359  Q
    |||||||||||||||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||    
T  29813361 gttactacttttctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaac 29813432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 22834932 - 22834806
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||| ||||| || | |||| || |||    ||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  22834932 ctagattagatctaggtgttgttattgttgttattacctgtgtttactt----tgatattggttactactttcctttgctccacacatcatagtttgtat 22834837  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| ||||||||||||    
T  22834836 tggtgtga-ttttgagtccgaattcacaacaa 22834806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 26299091 - 26299024
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||||||||| |||||| |||||||||| |||| |||||||| | |||||||||| |||||    
T  26299091 ctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccaga 26299024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 32143419 - 32143337
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  32143419 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 32143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 39153290 - 39153163
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||| ||  ||||||| || |||    |||   ||||||||||||| |||| |||||||||||||  | | |||    
T  39153290 ctagattagatctaggtgttgttattattgctgccgcttgtgtttactt----tgaaattggttactactttcctttgctccacacatcatagtttgtat 39153195  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| |||||| || ||||| ||||||    
T  39153194 tggtgtgagttttgagcccgaattctcaacaa 39153163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 40844754 - 40844668
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||| ||| | |||||||||| |||||  |||| ||||| |||||||    
T  40844754 ctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctctcc-ccagattaggtcatattggaccgaa 40844668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 27986449 - 27986523
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 27986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 32744377 - 32744335
Alignment:
Q  225 atttctagattagatctaggtgttgttattattgttgttgctt 267  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  32744377 atttctagattagatctaggtgttgttatcattgttgttgctt 32744335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 6794702 - 6794758
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  6794702 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 6794758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 761087 - 761212
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||| || |||| ||||| ||||||| | |  |||    ||||| ||||||||||||| |||| |||||||||||||  | | |||    
T  761087 ctagattagatctaggtgctgctattgttgttattgcttgagttcactt----tgattttggttactactttcctttgctccacacatcatagtttgtat 761182  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||  ||||||||||| ||||||||||||    
T  761183 tggtgt--gatttgagtccgaattcacaacaa 761212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 3323675 - 3323722
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 107  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3323675 ctaatttcttgtaactcatt-gtaacactttcatcttagtggattggag 3323722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 8126733 - 8126685
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 107  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  8126733 ctaatttcttgtaactcttttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 33386669 - 33386737
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 33386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 35925625 - 35925534
Alignment:
Q  17 aaatgggcagaaattaggttgtgttctt-tgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    ||||||| |||||||||||| ||||||  ||| ||||  |  |||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  35925625 aaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcatcatagtggattggaga 35925534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 26928590 - 26928652
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26928590 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgctctctcccccaga 26928652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 27453056 - 27452974
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| || ||  |||| ||||| |||||||    
T  27453056 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaa 27452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||| ||| |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 32891388 - 32891459
Alignment:
Q  288 tggttactacttttctttactccacacatcattattt-attggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||||||| |||| |||||||||||||  ||| ||||||||||| ||||||||| || |||||||||    
T  32891388 tggttactactttcctttgctccacacatcatagtttcattggtgtgagttttgagtccgaagtcacaacaa 32891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 32744590 - 32744516
Alignment:
Q  15 aaaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||| ||||||||| ||||  ||||||||||||  | ||  |||||||||||||||||||||||||||||||    
T  32744590 aaaaatgggtagaaattagtttgt--tctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 23410257 - 23410216
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23410257 ctagattagatctaggtgttgttaatatttttgttgcttgtg 23410216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 24695148 - 24695209
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||||| ||| | ||||||||||    
T  24695148 ctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcc 24695209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 31314683 - 31314724
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  31314683 ctagattatatttaggtgttgttattattgttgttgcttgtg 31314724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 47923890 - 47923951
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| |||| ||||| || | ||||||||||    
T  47923890 ctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcc 47923951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  22835156 aaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39153515 - 39153441
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| ||||| |||||||||  | ||  |||||||||||||||||||||||||| ||||    
T  39153515 aaaatgggtagaaattaggtt-tgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 2671585 - 2671647
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  2671585 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 2671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 7167342 - 7167280
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  7167342 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 7167280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 8477460 - 8477398
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  8477460 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 8477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 8739062 - 8739124
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  8739062 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 8739124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 9091300 - 9091362
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  9091300 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 9091362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 9666623 - 9666556
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcattt 79  Q
    |||||||||| ||||||||| || |||||||||||||||  ||| | |||||||||||||||||||||    
T  9666623 gaaaaatgggtagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaactcattt 9666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 29811110 - 29811238
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--a 325  Q
    |||||||||||||||||| ||||||| ||| || ||||||||| |  ||  ||||||   ||||||||||||| |||| ||||||| |||||  |||  |    
T  29811110 ctagattagatctaggtgctgttattgttgattattgcttgtgtt--ct--ctttgaaattggttactactttcctttgctccacaaatcatattttgta 29811205  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||| ||||||| | ||||||||||||    
T  29811206 ttggtgtgagttttgagttcgaattcacaacaa 29811238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34491226 - 34491300
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  34491226 aaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 34491300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 40372794 - 40372856
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  40372794 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 40372856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 46860488 - 46860562
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  46860488 aaaatgggtagaaattaggtt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 1306046 - 1305990
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||| |||||    
T  1306046 tttcttgtaaccc-tttgtaacactttcatcgtagtggattggagagctgctatctcc 1305990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||  |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  760861 aaaatgggtagaaattaggtc-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39039995 - 39040063
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||||| || ||||| | |||||  |||| ||||| |||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaa 39040063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 14521828 - 14521690
Alignment:
Q  7 gtgagatgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattgga 106  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||    
T  14521828 gtgacatgaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattgga 14521730  T
Q  107 gaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||| |||| |||| ||||| |||||||    
T  14521729 gaggtgctctctcctcgagagtaggtcatattggaccgaa 14521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 31076903 - 31077014
Alignment:
Q  27 aaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||  |||||||||||| |||||   ||||||| ||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||  |||    
T  31076903 aaattaggtcttgttctttgtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctatctcctagaga 31077002  T
Q  127 ggaggttatatt 138  Q
    | |||| |||||    
T  31077003 gtaggtcatatt 31077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 5572235 - 5572328
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| | |||  |||| ||||| |||||||||||||    
T  5572235 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggt 5572328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 10077159 - 10077252
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| |||||||||||||    
T  10077159 ctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggt 10077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 14521607 - 14521477
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttac----tacttttctttactccacacatcattattt 324  Q
    ||||||||||||||||||||||| ||||||||||||||||    || || ||||||   |||||||    ||||||||||| |||||||||||||  |||    
T  14521607 ctagattagatctaggtgttgttgttattgttgttgcttg----tgtttactttgaaattggttactacgtacttttctttgctccacacatcatagttt 14521512  T
Q  325 -attggtgtgagatttgagtcccaattcacaacaa 358  Q
     ||||||||||| ||||||||| ||||||||||||    
T  14521511 cattggtgtgagttttgagtccgaattcacaacaa 14521477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 5757477 - 5757565
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  5757477 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 5757565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21356134 - 21356046
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| || ||| |||||||||| ||||||||||||||| ||||||||||||||||  |||| ||||| ||||||| |||||    
T  21356134 tttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggt 21356046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 31086467 - 31086528
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  31086467 ctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcc 31086528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 31979615 - 31979523
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||| | |||||||||| |||||  | || ||||| ||||||| |||||    
T  31979615 taatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggt 31979523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 4630056 - 4629998
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||    
T  4630056 taatttcttgtaactattttgtaacactttcatcttagtggattggagagctgctctct 4629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 21801339 - 21801405
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||| |||| |||||    
T  21801339 taatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccaga 21801405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 22963802 - 22963741
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||||||||    
T  22963802 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcc 22963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 23824591 - 23824652
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||||||||    
T  23824591 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcc 23824652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 3038849 - 3038766
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||| ||||   ||| ||||||||||  |||||| |||||| |||| ||| |||||||||    
T  3038849 attagatctaggtgttgttattattgttgttacttg---ttgtttgctttgatattggttattactttcctttgctcgacacatcat 3038766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 24435965 - 24436061
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    |||||||||||||| ||||||||| || ||||||| |||||||| |||| | |||||||||| | |||| |||| ||||| || |||| ||||||||    
T  24435965 ctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgctctctcccctagagtaggtcatattggatcgaactgggttac 24436061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 18232945 - 18232862
Alignment:
Q  62 atttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccga 145  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||||| | |||||||||| |||||  |||| ||||| ||||||    
T  18232945 atttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattggaccga 18232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 33160276 - 33160236
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgt 269  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  33160276 ctagattagatctaggtgttgttaatattgttgttgcttgt 33160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 22709102 - 22709054
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 22709054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 31936671 - 31936603
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| ||||||||| |||||||||||||||| |||||||||  |||||  |||| ||||| |||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaa 31936603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2973093 - 2973019
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  2973093 aaaatgggtagaaattaggtt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 5043641 - 5043715
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||| | |||||||||||| |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  5043641 aaaatgagtagaaattaggtt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 5043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 319
Target Start/End: Complemental strand, 5406073 - 5406042
Alignment:
Q  288 tggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||||    
T  5406073 tggttactacttttctttactccacacatcat 5406042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 319
Target Start/End: Complemental strand, 5410398 - 5410367
Alignment:
Q  288 tggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||||    
T  5410398 tggttactacttttctttactccacacatcat 5410367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 5674769 - 5674831
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  5674769 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 5674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 17763004 - 17763073
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatc 84  Q
    |||||||| |||||||||| | |||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  17763004 aaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatc 17763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 33211115 - 33211074
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||||||||||||||| ||||| ||||| |||||||||    
T  33211115 ctagattagatctaggtgttattattgttgttattgcttgtg 33211074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16569047 - 16569083
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagct 52  Q
    |||||||| |||||||||||| |||||||||||||||    
T  16569047 aaaatgggtagaaattaggttttgttctttgtgagct 16569083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 28617173 - 28617312
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||| || |||||||||||| ||||||||||||||| ||   ||||||||||||||| |  |||||||||||||||||||||||||||||||| ||    
T  28617173 tgaaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctg 28617272  T
Q  113 ctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||| |||||| |||| ||||| ||||||| |||||    
T  28617273 ctctctcccccagagtaggtcatattggaccgaactgggt 28617312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 5817218 - 5817350
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||  |||||||||||| |||||||||||||||||| | | ||||||||||||| | |||||||||||||||| |||||||||||||||| ||    
T  5817218 tgaaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctg 5817317  T
Q  113 ctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||| |||||| |||| ||||| |||||||    
T  5817318 ctctctcc-ccagagtaggtcatattggaccgaa 5817350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 41317364 - 41317238
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| ||||| |||||||  | | |||    
T  41317364 ctagattagatctaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtat 41317269  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||||||||||| | |||||||||||    
T  41317268 tggtgtgagatttgagttcgaattcacaaca 41317238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 47676062 - 47675936
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  47676062 ctagattagatctaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccacacatcatagtttgtat 47675967  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||| |||| |||| |||||||||||    
T  47675966 tggtgtgagttttgtgtccgaattcacaaca 47675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 2580488 - 2580400
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||  |||| ||||| |||||||||||||    
T  2580488 tttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggt 2580400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 3047402 - 3047261
Alignment:
Q  15 aaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||| |||||||||||  ||||||||||||||| ||    | ||||||||||||||||||||| ||||||||| ||||||||||||| |   |||    
T  3047402 aaaaatgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggct 3047303  T
Q  115 ctct-cctccagaggaggttatattagaccgaattgggttac 155  Q
    |||| || |||||| |||| ||||| ||||||| ||||||||    
T  3047302 ctctccccccagagcaggtcatattggaccgaactgggttac 3047261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 33332444 - 33332537
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||| |||||  |||| |||||||| |||| |||||    
T  33332444 ctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggt 33332537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 36146338 - 36146251
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| |||||||||||||    
T  36146338 ctagattagatctagatgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccacacatcat 36146251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 14069759 - 14069632
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||| ||||||||||    || || ||||||   | ||||||||||| |||| |||||||||||||  | | |||    
T  14069759 ctagattagatctaggtgttgttattattattgttgcttg----tgtttactttgaaattagttactactttcctttgctccacacatcatagtttgtat 14069664  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| ||||||||||||    
T  14069663 tggtgtgagttttgagtccgaattcacaacaa 14069632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 14379787 - 14379660
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||| ||||||||||    || || ||||||   | ||||||||||| |||| |||||||||||||  | | |||    
T  14379787 ctagattagatctaggtgttgttattattattgttgcttg----tgtttactttgaaattagttactactttcctttgctccacacatcatagtttgtat 14379692  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| ||||||||||||    
T  14379691 tggtgtgagttttgagtccgaattcacaacaa 14379660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 29159951 - 29159813
Alignment:
Q  15 aaaaatgggcagaaattaggttgtgttctt-tgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    ||||||||| |||||||||||  ||||||| ||| ||||  |   ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||    
T  29159951 aaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgc 29159852  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| | |||  |||| ||||| ||||||| |||||    
T  29159851 tctctcccctagattaggtcatattggaccgaactgggt 29159813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 2647690 - 2647783
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| | |||||||||||    
T  2647690 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggt 2647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 9190007 - 9190095
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9190007 tttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggt 9190095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 19502421 - 19502547
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||| ||   || ||||||   ||||||||||||| |||| |||||||||||||  | | |||    
T  19502421 ctagattagatctaggtgttgttattattgttgttgcttgt-at---ttactttgaaattggttactactttcctttgctccacacatcatagtttgtat 19502516  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    | ||||||| ||||||||  |||||||||||    
T  19502517 tagtgtgagttttgagtctgaattcacaaca 19502547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 56050 - 55958
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  56050 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcc-ccagattaggtcatattggaccgaactgggt 55958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 20284191 - 20284099
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  20284191 ctaatttcttgtaacgcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 20284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 23403008 - 23403100
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||| | ||||| ||||  ||||  |||| |||||||||||||||||||    
T  23403008 ctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggctgctcactccctcagattaggtcatattagaccgaattgggt 23403100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 359
Target Start/End: Original strand, 23555283 - 23555412
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--a 325  Q
    |||||||||||||||||||||||||| ||| || ||||||||| |  |||    ||||  ||||||||||||| |||| |||||||||||||  |||  |    
T  23555283 ctagattagatctaggtgttgttattgttgattattgcttgtgttcactt----tgatattggttactactttcctttgctccacacatcatagtttgta 23555378  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaac 359  Q
    |||||||||| ||||||||| |||||||||||||    
T  23555379 ttggtgtgagttttgagtccgaattcacaacaac 23555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 46516304 - 46516397
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| | |||  |||| ||||| ||||||| |||||    
T  46516304 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggt 46516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 18126888 - 18127016
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--a 325  Q
    |||||||||||||||||||||||||| ||| || ||||||||| |  |||    ||||  || |||||||||| ||||||||||||||||||  |||  |    
T  18126888 ctagattagatctaggtgttgttattcttgattattgcttgtgttcactt----tgatattgattactactttcctttactccacacatcatagtttgta 18126983  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||| ||||||||| ||||||||||||    
T  18126984 ttggtgtgagttttgagtccgaattcacaacaa 18127016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 9185178 - 9185252
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||||||||||||||||||||||| | |||||||| |||||  |||||||||| ||||||| |||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggt 9185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21983384 - 21983294
Alignment:
Q  63 tttcttgtaactcattt-gtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| ||| ||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  21983384 tttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 21983294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 49091763 - 49091705
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||    
T  49091763 taatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctct 49091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 30024682 - 30024641
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30024682 ctagattagatctaggtgttgttattattgttgttgcttgtg 30024641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 24525424 - 24525345
Alignment:
Q  237 gatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||  || ||||||||||||||| || |||| |||||    
T  24525424 gatctaggtgttgttattattgttgttgcttg---ttgtttgctttgatattgattactacttttctttgctacacatatcat 24525345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 35960919 - 35960852
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||| ||||||||||||| |||||||||| |||||| |||||| | |||||||||| |||||    
T  35960919 ctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgctctctcccccaga 35960852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 47673870 - 47673743
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||||||||| |||    || |  |||||||  |||||||||||||  |||  ||||||||||||  | | |||    
T  47673870 ctagattagatctaggtgttgttattattgttgttgtttg----tgttcactttgatattggttactactttcttttgttccacacatcatagtttgtat 47673775  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| |||| |||| |||||| |||||    
T  47673774 tggtgtgagttttgtgtccgaattcataacaa 47673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 357
Target Start/End: Original strand, 26417559 - 26417685
Alignment:
Q  230 tagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    ||||||| ||||||||| ||||||| ||| || ||||||||| || |||    ||||  ||||||||||||| |||||||||||| |||||  |||  ||    
T  26417559 tagattatatctaggtgctgttattgttgattattgcttgtggttactt----tgatattggttactactttcctttactccacatatcatagtttgtat 26417654  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||| ||||||||| |||||||||||    
T  26417655 tggtgtgagttttgagtccgaattcacaaca 26417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 31105322 - 31105200
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat-tatttatt 327  Q
    ||||||||||||| ||||||||||||   ||||||||||||| || |||    ||||  || |||||||||| ||||||||||||||||||   ||||||    
T  31105322 ctagattagatcttggtgttgttatt---gttgttgcttgtgtttactt----tgatattgattactactttcctttactccacacatcatagttttatt 31105230  T
Q  328 ggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||| |||| || | |||||||||||    
T  31105229 ggtgtgagttttgtgttcgaattcacaaca 31105200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 31519133 - 31519258
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    ||||||||||||||||||||||||||||||||| ||||| |||    || | |||||  |  |||||| |||| ||| ||||||||||| ||||||  ||    
T  31519133 ctagattagatctaggtgttgttattattgttgctgcttatga----ttacattgatattaattactatttttatttgctccacacatc-ttattttcat 31519227  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||| ||||| ||||||||| |||||||||||    
T  31519228 tggcgtgagttttgagtccaaattcacaaca 31519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 44848683 - 44848744
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccag 125  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| ||||    
T  44848683 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccag 44848744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 4586459 - 4586531
Alignment:
Q  288 tggttactacttttctttactccacacatcattattta--ttggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||| ||||| |||| |||||||||||||  ||||  |||||||||||||||||||| ||||||||||||    
T  4586459 tggttaccactttcctttgctccacacatcatagtttacattggtgtgagatttgagtccgaattcacaacaa 4586531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 8153581 - 8153621
Alignment:
Q  230 tagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  8153581 tagatcagatctaggtgttgttattattgttgttgcttgtg 8153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 4796661 - 4796756
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggtta 154  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||| ||| | |||| ||||| |||||  |||| || || ||||||| |||||||    
T  4796661 ctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggtta 4796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 495913 - 495822
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt 324  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| || |||    ||||  ||||||||||||| |||| ||||||| ||||| ||||    
T  495913 ctagattagatctaggtgttgttattgttgttattgtttgtgtttactt----tgatattggttactactttcctttgctccacatatcataattt 495822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 23564995 - 23564893
Alignment:
Q  225 atttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt 324  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||| || |||    ||||  |||| |||||||||||| ||||||||||||  | |||    
T  23564995 atttctagattagatctaggttttgttatt---gttgttgcttgtggttactt----tgatattggtcactacttttcttcactccacacatctatgttt 23564903  T
Q  325 attggtgtga 334  Q
    ||| ||||||    
T  23564902 attagtgtga 23564893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 38671150 - 38671025
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||| |||||||||||||| |||||||| ||||||||    || |  |||||||| | ||||||| ||| |||| |||||||||||||  | | |||    
T  38671150 ctagatttgatctaggtgttgtcattattgtcgttgcttg----tgttcactttgatttttgttactattttcctttgctccacacatcatagtttgtat 38671055  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||||||| |||||||||||    
T  38671054 tggtgtga-ttttgagtccgaattcacaaca 38671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 18413737 - 18413681
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  18413737 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 18413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 41649166 - 41649091
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctcttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||| || |||||||||||| |||||||||||||||  | || ||||||||||||||| |||||||||| ||||    
T  41649166 gaaaaattggtagaaattaggtt-tgttctttgtgagcttgtttagctaatttcttgtaacccatttgtatcccttt 41649091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 1533443 - 1533505
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  1533443 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagatgctctctcccccaga 1533505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 2058063 - 2058001
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  2058063 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 2058001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2361126 - 2361052
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  2361126 aaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 2361052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 18408861 - 18408799
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  18408861 tttcttgtaaccc-tttgtaacactttcatcatactggattggagagctgctctctcccccaga 18408799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 21639906 - 21639844
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  ||||||||||||||| |||||||||| |||||    
T  21639906 tttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgctctctcccccaga 21639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21989006 - 21988918
Alignment:
Q  63 tttcttgtaactcattt-gtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||  ||||||||||||  |||| ||||| ||||||| |||||    
T  21989006 tttcttgtaactctttttgtaacactttcatcaaagtggattggagagttg--ctctcctccagattaggtcatattggaccgaactgggt 21988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 24526051 - 24525985
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttg 80  Q
    |||||||| |||||||||||| |||||||||||||||  |  |  ||||||||||||||||||||||    
T  24526051 aaaatgggtagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttg 24525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 29608751 - 29608825
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  29608751 aaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 29608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 353
Target Start/End: Original strand, 43864486 - 43864609
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--a 325  Q
    |||||||||||||||||| ||||||| ||| || ||||||||| |  |||    ||||  || |||| ||||| ||||||||||||||||||  |||  |    
T  43864486 ctagattagatctaggtgctgttattgttgattattgcttgtgttcactt----tgatattgattaccactttcctttactccacacatcatagtttgta 43864581  T
Q  326 ttggtgtgagatttgagtcccaattcac 353  Q
    |||||||||| ||||||||| |||||||    
T  43864582 ttggtgtgagttttgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 48599488 - 48599414
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  48599488 aaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 48599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 1113895 - 1114021
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||| ||||| ||||| |||||||    || || |||||||  | ||||| ||||| |||| |||||||||||||  | | |||    
T  1113895 ctagattagatctaggtgttattattgttgttattgcttg----tgtttactttgatattagttaccactttcctttgctccacacatcatagtttgtat 1113990  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    || |||||| ||||| ||  |||||||||||    
T  1113991 tgatgtgagttttgattcggaattcacaaca 1114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 29991299 - 29991382
Alignment:
Q  233 attagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    |||||||||||||||||||||| ||| || || ||||||    ||  |||||||  |||||||||||||||||| |||||||||||||    
T  29991299 attagatctaggtgttgttattgttgattattacttgtg----ctcactttgatattggttactacttttctttgctccacacatcat 29991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 2390294 - 2390370
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||| | |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  2390294 gaaaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 31732839 - 31732768
Alignment:
Q  288 tggttactacttttctttactccacacatcattatttat--tggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||||||||  ||| |||||||||||||  ||| |  ||||||||| ||||||||| |||||||||||    
T  31732839 tggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttgagtccgaattcacaaca 31732768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 38671376 - 38671302
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||| | |||||||||||||||  | ||  ||||||| ||||||| |||||||||||||||    
T  38671376 aaaatgggtagaaattagggt-tgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 48489720 - 48489798
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaac 356  Q
    |||||||  ||||||||||||| |||| |||||||||||||  ||  |||||||||||  ||||||||| ||||||||||    
T  48489720 ctttgatattggttactactttcctttgctccacacatcatagttggtattggtgtga-ttttgagtccgaattcacaac 48489798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 17345469 - 17345607
Alignment:
Q  15 aaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||| |||||||||||| ||||||||||| |||||| | ||||||||||||| | |||||||| ||| |||||||||||||||||||||| | ||    
T  17345469 aaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacatttgtaccacgttcatcttagtggattggagagctcct 17345568  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggtta 154  Q
    || ||| |||||| |||| ||||||||||||| |||||||    
T  17345569 ctttcc-ccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 13137906 - 13137780
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || || ||||||   ||||||||||||| |||| ||||||||||||| |||  |||    
T  13137906 ctagattagatctaggtgttgttattattgttgttgcttg----tgtttactttgaaattggttactactttcctttgctccacacatcataatttgtat 13137811  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||| ||||||||| |||| ||||||    
T  13137810 tggtgtgagttttgagtccgaatttacaaca 13137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 19073031 - 19072938
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  19073031 ctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 19072938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 19120921 - 19120828
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  19120921 ctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 19120828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 27104366 - 27104453
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||||||||| |||||||    
T  27104366 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaa 27104453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 22819532 - 22819435
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct-cctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | | |||||| || |||||| |||| ||||| |||| |||||||||||    
T  22819532 ctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggctactctctccccccagagtaggtcatattggaccaaattgggttac 22819435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 45644284 - 45644158
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  45644284 ctagattagatctagatgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtat 45644188  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    | ||||||  ||||||||| |||||||||||    
T  45644187 ttgtgtga-ttttgagtccgaattcacaaca 45644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 9023787 - 9023883
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagag 109  Q
    |||||| |||| |||||||||||  | ||||||||||||| || | ||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  9023787 tgaaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagag 9023883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 28223347 - 28223220
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || |  |||||||  |||||||||||||  ||| |||||||||||||  | | |||    
T  28223347 ctagattagatctaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcgtttgctccacacatcatagtttgtat 28223252  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||| |||| ||||||||| ||||||||||||    
T  28223251 tggtctgagttttgagtccgaattcacaacaa 28223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 47703930 - 47704023
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  47703930 ctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 47704023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 16124510 - 16124597
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| |||||||    
T  16124510 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaa 16124597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 28220152 - 28220025
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||||||||| |||    || |  |||| ||  ||||||||| ||||||||  ||||||||||||  | | |||    
T  28220152 ctagattagatctaggtgttgttattattgttgttgtttg----tgttcactttaatattggttactaattttctttgttccacacatcatagtttgtat 28220057  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| ||||||||||||    
T  28220056 tggtgtgagttttgagtccgaattcacaacaa 28220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 196835 - 196710
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tat 326  Q
    ||||||||||| ||||||||||||||||||||||||||||    || |  |||||||  ||||||||| ||| |||| ||||||||||||| |||  |||    
T  196835 ctagattagatgtaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactattttcctttgctccacacatcataatttgtat 196740  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||| |||||||| | |||||||||||    
T  196739 tggtgtga-atttgagtacgaattcacaaca 196710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 1833751 - 1833876
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || || ||||||   ||||||| ||||| |||||||||||| |||||  | | |||    
T  1833751 ctagattagatctaggtgttgttattattgttgttgcttg----tgtttactttgaaattggttacgactttcctttactccacagatcatagtttgtat 1833846  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||| | |||||||| |||||||||||    
T  1833847 tggtgtgata-ttgagtccgaattcacaaca 1833876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 47098819 - 47098911
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||| |||||   ||| ||||| ||||||| |||||    
T  47098819 ctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggt 47098911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 50167105 - 50167019
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||    ||||  ||||||||||||| |||| |||||||||||||    
T  50167105 ctagattagatctaggtgttgttattattgttgtttcttgtgtttactt----tgatattggttactactttcctttgctccacacatcat 50167019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 29651913 - 29651821
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| || |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  29651913 taatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggt 29651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 356
Target Start/End: Complemental strand, 30476371 - 30476247
Alignment:
Q  230 tagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttatt 327  Q
    |||||||| |||| |||||||||||||||||||||||||    || || ||||||   ||||||||||||| ||||||||||||||| ||  | | ||||    
T  30476371 tagattaggtctaagtgttgttattattgttgttgcttg----tgtttactttgaaattggttactactttcctttactccacacattatagtttgtatt 30476276  T
Q  328 ggtgtgagatttgagtcccaattcacaac 356  Q
    |||||||| ||||||| | ||||||||||    
T  30476275 ggtgtgagttttgagttcgaattcacaac 30476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 775757 - 775682
Alignment:
Q  77 tttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||||||||||||||||||||||| | |||||||| |||||  |||| ||||| |||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggt 775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 4552574 - 4552447
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||| |||||||||||||||||||| ||||    || || ||||||   ||||||||||||| ||||||| ||| ||||||  | | |||    
T  4552574 ctagattagatctatgtgttgttattattgttgttacttg----tgtttactttgaaattggttactactttcctttacttcacgcatcatagtttgtat 4552479  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||| |||||||||| ||||| ||||||    
T  4552478 tggtgtgaaatttgagtccgaattcgcaacaa 4552447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 358
Target Start/End: Complemental strand, 23555192 - 23555070
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tattggt 330  Q
    |||||||||||||||||||||| |||||||||||||    || || ||||||   || ||||||||||||||| |||||||||||||| ||  |||||||    
T  23555192 attagatctaggtgttgttattgttgttgttgcttg----tgtttactttgacattgattactacttttctttgctccacacatcattgtttctattggt 23555097  T
Q  331 gtgagatttgagtcccaattcacaacaa 358  Q
    | ||  ||||||||| ||||||||||||    
T  23555096 gcga-ttttgagtccgaattcacaacaa 23555070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 32889537 - 32889455
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||| |||||  |||| ||||| |||||||    
T  32889537 tttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaa 32889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3281806 - 3281718
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| | ||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  3281806 tttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 3281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 9476364 - 9476271
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||| |||||| ||||||  ||||||||| ||||||||||||||| |||||||||| | |||  |||| ||||| ||||||| |||||    
T  9476364 ctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggt 9476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 13598501 - 13598408
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||||| || | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  13598501 ctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggt 13598408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 26644896 - 26644984
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| || |||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  26644896 tttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 26644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 357
Target Start/End: Complemental strand, 834093 - 833970
Alignment:
Q  231 agattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattg 328  Q
    ||||||||||| |||||||||||| ||||| ||||||||| || |||    ||||  ||||||||||||| |||| |||||||||||||  | | |||||    
T  834093 agattagatcttggtgttgttattgttgttattgcttgtgtttactt----tgatattggttactactttcctttgctccacacatcatagtttgtattg 833998  T
Q  329 gtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||  ||||||||| |||||||||||    
T  833997 gtgtga-ttttgagtccgaattcacaaca 833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 358
Target Start/End: Complemental strand, 40122122 - 40122000
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattggt 330  Q
    ||||||||||||||||||||||||||||||||||||    || |  ||| |||  ||||||||||||| |||| |||||| ||||||  | | |||||||    
T  40122122 attagatctaggtgttgttattattgttgttgcttg----tgttcacttagatattggttactactttcctttgctccacgcatcatagtttgtattggt 40122027  T
Q  331 gtgagatttgagtcccaattcacaacaa 358  Q
    ||||  ||||||||| ||||||||||||    
T  40122026 gtga-ttttgagtccgaattcacaacaa 40122000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 46065156 - 46065195
Alignment:
Q  230 tagattagatctaggtgttgttattattgttgttgcttgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46065156 tagattagatctaggtgttgttattattgttgttgcttgt 46065195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 28265484 - 28265359
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||| ||||||||||||||||||||||||    || |  |||||||  ||| ||||| ||| ||||||||||||||||||  | | |||    
T  28265484 ctagattagatctagatgttgttattattgttgttgcttg----tgttcactttgatattggctactattttcctttactccacacatcatagtttgtat 28265389  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||  ||||||||| ||||| |||||    
T  28265388 tggtgtga-ttttgagtccgaattcccaaca 28265359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 41361153 - 41361279
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt-att 327  Q
    ||||||||||| |||||||||||||| |||||||| |||||| || |||    ||||  || ||| |||||| |||| |||||||||||||  ||| |||    
T  41361153 ctagattagatataggtgttgttattgttgttgttacttgtgtttactt----tgatattgattaatactttcctttgctccacacatcatagttttatt 41361248  T
Q  328 ggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||  ||| ||||||||| ||||||||||||    
T  41361249 ggttagagttttgagtccgaattcacaacaa 41361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 8550710 - 8550583
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tattta 325  Q
    |||||||||||||||||||||||||| ||| || ||||||||| |  |||    ||||  ||||||||||||| |||| |||||||||||||  | | ||    
T  8550710 ctagattagatctaggtgttgttattgttgattattgcttgtgttcactt----tgatattggttactactttcctttgctccacacatcatagtttgta 8550615  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||  ||||||||| ||||||||||||    
T  8550614 ttggtgtga-ttttgagtccgaattcacaacaa 8550583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 8550941 - 8550867
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  | ||  |||||||||||||||||||||||||| ||||    
T  8550941 aaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 47102837 - 47102928
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||  | |||||||||| | |||  |||| ||||| ||||||| |||||    
T  47102837 taatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggt 47102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 21536568 - 21536630
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||| |||||    
T  21536568 tttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctcccccaga 21536630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 24202768 - 24202830
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  24202768 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 24202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 31659480 - 31659607
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatc--attattta 325  Q
    |||||||||||| ||||||||||||| ||| || ||||||||| |  | |  ||||||  |||||||||||||||||| |||||||||||  ||| | ||    
T  31659480 ctagattagatcaaggtgttgttattgttgattattgcttgtgtt--cat--tttgatattggttactacttttcttttctccacacatcatattttata 31659575  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||||  ||||||||| ||||||||||||    
T  31659576 ttggtgtga-ttttgagtccgaattcacaacaa 31659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 3847045 - 3846960
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||||||||||||||||| |||||| |||    || |  |||||||  ||||||||||||| ||||||||||||||||||    
T  3847045 attagatctaggtgttgttattattattgttg-ttgcttgtgttcactttgatattggttactactttcctttactccacacatcat 3846960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 37559744 - 37559663
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattatttat--tggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||  ||||||||||||| |||| ||||| |||||||  |||||  ||||||||| ||||||||| ||||||||||||    
T  37559744 ctttgatattggttactactttcctttgctccagacatcatagtttatattggtgtgagttttgagtccgaattcacaacaa 37559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 13604622 - 13604678
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||||    
T  13604622 tttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 13604678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19358842 - 19358898
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19358842 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19358898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19361431 - 19361487
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19361431 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19361487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19380071 - 19380127
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19380071 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19380127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 50169140 - 50169099
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  50169140 ctagattagatataggtgttgttattattgttgttgtttgtg 50169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 48382476 - 48382524
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    ||||||||||||||  |||||||||||||||||| || |||||||||||    
T  48382476 taatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 927862 - 927785
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaaca 357  Q
    |||||||  ||||||| ||||  ||||||||||||||||||  ||||||| |||||  ||||||||| |||||||||||    
T  927862 ctttgatattggttaccacttccctttactccacacatcatagtttattgatgtga-ttttgagtccgaattcacaaca 927785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3189573 - 3189607
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgtt 263  Q
    |||||||||||||||||||| ||||||||||||||    
T  3189573 ctagattagatctaggtgttattattattgttgtt 3189607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3198390 - 3198424
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgtt 263  Q
    |||||||||||||||||||| ||||||||||||||    
T  3198390 ctagattagatctaggtgttattattattgttgtt 3198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3207229 - 3207263
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgtt 263  Q
    |||||||||||||||||||| ||||||||||||||    
T  3207229 ctagattagatctaggtgttattattattgttgtt 3207263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 11032268 - 11032378
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| |||||||| ||| ||||||||||||| | ||   |||||||||||||||   ||| ||||||| | ||| ||||||||  || || ||    
T  11032268 tgaaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggatcagatagttg 11032367  T
Q  113 ctctctcctcc 123  Q
    |||| ||||||    
T  11032368 ctctatcctcc 11032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 40122354 - 40122278
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||  |||||||| || |||||||||||||||  | ||  |||||||||| ||||||||||||||||||||    
T  40122354 gaaaaatgggtcgaaattagatt-tgttctttgtgagcttgtttaagctaatttcttataactcatttgtatcacttt 40122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 47255496 - 47255420
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||| | |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  47255496 gaaaaatgggtagaaattagggt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 47255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 16455861 - 16455897
Alignment:
Q  231 agattagatctaggtgttgttattattgttgttgctt 267  Q
    ||||||||||||  |||||||||||||||||||||||    
T  16455861 agattagatctatatgttgttattattgttgttgctt 16455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 40816808 - 40816844
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatctt 95  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  40816808 ctaatttcttgtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 46064943 - 46065006
Alignment:
Q  27 aaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||||||||| ||| | ||||||||||||||||||| |||||| ||||    
T  46064943 aaattaggtt-tgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctcttt 46065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 11181782 - 11181923
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttc-tttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||| |||||||||||  ||||| |||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  11181782 aaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgct 11181881  T
Q  115 ctctcctcc-agaggaggttatattagaccgaattgggttac 155  Q
    |||||| || |||| |||| ||||||||||||| | ||||||    
T  11181882 ctctccccctagagtaggtcatattagaccgaactaggttac 11181923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 33030888 - 33031021
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| |||||||| ||| ||||||||||||||| ||   ||||||||||||||| |  ||| |||||||||||||||||| ||||||||| ||    
T  33030888 tgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctg 33030987  T
Q  113 ctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||| |||||| | || ||||| |||||||    
T  33030988 ctctctcccccagagtatgtcatatttgaccgaa 33031021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 28750581 - 28750455
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt--tat 326  Q
    ||||||||||||||||||||||||||||||||||||||||    || || |||| |   ||||||||||||| |||| ||||||||||||| |||  |||    
T  28750581 ctagattagatctaggtgttgttattattgttgttgcttg----tgtttactttaaaattggttactactttcctttgctccacacatcataatttgtat 28750486  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||| ||||||||| |||||||||||    
T  28750485 tggtgtgagttttgagtccaaattcacaaca 28750455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 10281854 - 10281761
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  10281854 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggt 10281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 3880446 - 3880343
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctt-tgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||| |||||||||||  ||||||| ||| ||||  |  |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  3880446 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 3880347  T
Q  115 ctct 118  Q
    ||||    
T  3880346 ctct 3880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 28832361 - 28832275
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||| |||||  |||| ||||| |||||||    
T  28832361 ctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaa 28832275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 6742001 - 6741887
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||| | |||||||||||| ||||||||||||| |      ||||||||||||||||  |||||||||||| ||||||| |||||||||||| ||    
T  6742001 tgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctg 6741902  T
Q  113 ctctctcctccagag 127  Q
    |||| ||| ||||||    
T  6741901 ctctatcccccagag 6741887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 13488443 - 13488569
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    |||||||||||||||||||||||||||||| | ||| ||||| |  |||    |||   |||||| |||||| ||||||||||||||||||  |||  ||    
T  13488443 ctagattagatctaggtgttgttattattgctattgattgtgttcactt----tgaaattggttattactttcctttactccacacatcatattttgtat 13488538  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||||||||||||| |||||||||||    
T  13488539 tggtgtgagatttgagtccgaattcacaaca 13488569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 9353331 - 9353419
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9353331 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 9353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 36932349 - 36932437
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  36932349 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 36932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 42127405 - 42127497
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| | | |||||||||| |||||  |||| |||||||| |||| |||||    
T  42127405 ctaatttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggt 42127497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 538263 - 538387
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||| ||||||||||||||||||||||||    || || ||||||   |||||| |||||| |||| |||||||||||||  | | |||    
T  538263 ctagattagatctagatgttgttattattgttgttgcttg----tgtttactttgaaattggttattactttcctttgctccacacatcatagtttatat 538358  T
Q  327 tggtgtgagatttgagtcccaattcacaa 355  Q
    ||||||||| ||||||||  |||||||||    
T  538359 tggtgtgagttttgagtctgaattcacaa 538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 42428356 - 42428244
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||||||||||||||||||||| ||||||||||    || |  |||||||  ||||||||||||| |||| |||||||||||||  | | |||    
T  42428356 ctagattagatctaggtgttgttattattattgttgcttg----tgttcactttgatattggttactactttcctttgctccacacatcatagtttgtat 42428261  T
Q  327 tggtgtgagatttgagt 343  Q
    ||||||||| |||||||    
T  42428260 tggtgtgagttttgagt 42428244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 5887360 - 5887234
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||| ||||||||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| ||||||| |||||  | | |||    
T  5887360 ctagattagatttaggtgttgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccacatatcatagtttgtat 5887265  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| ||||||||||||    
T  5887264 tggtgtga-ttttgagtccgaattcacaacaa 5887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 42426161 - 42426034
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||| |||||||||    || |  |||||||  |||||||||||||  ||| |||||||||||||  | | |||    
T  42426161 ctagattagatctaggtgttgttattattgatgttgcttg----tgttcactttgatattggttactactttcttttgctccacacatcatagtttgtat 42426066  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    | ||||||| ||||||| | ||||||||||||    
T  42426065 ttgtgtgagttttgagttcgaattcacaacaa 42426034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 11916965 - 11917059
Alignment:
Q  58 actaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||| ||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  11916965 actattttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggt 11917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 30682849 - 30682719
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--a 325  Q
    |||||||||||||||||||||||||| ||| || ||||||||| |  |||    ||||  ||||||||||||| |||| |||||||||||||  |||  |    
T  30682849 ctagattagatctaggtgttgttattgttgattattgcttgtgttcactt----tgatattggttactactttcctttgctccacacatcatagtttgta 30682754  T
Q  326 ttggtgtgagatttgagtcccaattcacaacaact 360  Q
    |||||||||| |||||||||  |||||||||||||    
T  30682753 ttggtgtgagttttgagtccgtattcacaacaact 30682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 31183216 - 31183342
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    ||||||||||| ||||||||||||||||| |||||||||||| || |   |||||||  | ||||||||||| |||| |||||||||||||  | | |||    
T  31183216 ctagattagatataggtgttgttattatttttgttgcttgtg-ttcc---ctttgatattagttactactttcctttgctccacacatcatggtttgtat 31183311  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||  ||||||||| ||||||||||||    
T  31183312 tggtgtga-ttttgagtccgaattcacaacaa 31183342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 13239994 - 13240080
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    |||||||||||||||||||||||||| |||||||||||||    || || |||| |   ||||||||||||| ||||||||||||||||||    
T  13239994 ctagattagatctaggtgttgttattgttgttgttgcttg----tgtttactttaaaattggttactactttcctttactccacacatcat 13240080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 15464630 - 15464542
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  || | ||||| ||||||| |||||    
T  15464630 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggt 15464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 19588848 - 19588788
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||||||||    
T  19588848 taatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcc 19588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 32637066 - 32637190
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||||||| |||||||||    || ||  | |||   | ||||||||||| ||||||||||||||||||  | | |||    
T  32637066 ctagattagatctaggtgttgttattattgatgttgcttg----tgtttagtgtgaaatttgttactactttcctttactccacacatcatagtttgtat 32637161  T
Q  327 tggtgtgagatttgagtcccaattcacaa 355  Q
    ||||||||| ||||| ||| |||||||||    
T  32637162 tggtgtgagttttgaatccgaattcacaa 32637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 534013 - 534128
Alignment:
Q  241 taggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--attggtgtgagatt 338  Q
    ||||||||||||||||| ||||||||||||  | |||    |||   ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||    
T  534013 taggtgttgttattattattgttgcttgtgtctactt----tgaaattggttactactttcctttgctccacacatcatagtttctattggtgtgagttt 534108  T
Q  339 tgagtcccaattcacaacaa 358  Q
    ||||||| ||||||||||||    
T  534109 tgagtccgaattcacaacaa 534128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 2630366 - 2630247
Alignment:
Q  27 aaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||| ||||||||||| | | ||   ||||||| ||||||| | ||||||||||||||||| |||||||||| |||| |||| |||||  || |    
T  2630366 aaattaggttttgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaa 2630267  T
Q  127 ggaggttatattagaccgaa 146  Q
    | |||| ||||| |||||||    
T  2630266 gcaggtcatattggaccgaa 2630247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 7160863 - 7160958
Alignment:
Q  25 agaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    |||||||| ||  ||||||||||||||| |    ||||||| ||||||| | |||||||||||||||||| |||||||||||||| || |||||||    
T  7160863 agaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctctcc 7160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 12084171 - 12084228
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||    
T  12084171 taatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctct 12084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 16649760 - 16649674
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    |||||||||||||||||||||||||||||| |  | |||||| |  |||    ||||||||||||||||||| |||| |||||||||||||    
T  16649760 ctagattagatctaggtgttgttattattgctactacttgtgttcactt----tgattgtggttactactttcctttgctccacacatcat 16649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 37439384 - 37439425
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  37439384 ctagattagacctaggtgttgttattattgttgttgcttgtg 37439425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 42927135 - 42927176
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  42927135 ctagattagatctaggtgttgttattgttgttgttgcttgtg 42927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 38192271 - 38192209
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  38192271 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 38192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 38219496 - 38219434
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  38219496 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 38219434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 33831692 - 33831768
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||||| |||||||||||||||  | ||  ||||||||||||||| |||||||||| ||||    
T  33831692 gaaaaatgggtagaaattaggtt-tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 24553502 - 24553561
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||| | ||||||||||    
T  24553502 ctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggag-gctgctctctcc 24553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 31300595 - 31300683
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| ||||||||  || |||||||||||||||||||||||||| | ||||||||  ||||  |||| ||||| ||||||| |||||    
T  31300595 tttcttgcaactcatta-taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggt 31300683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 8565876 - 8565841
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttg 264  Q
    ||||||||||||||||||||||||||||| ||||||    
T  8565876 ctagattagatctaggtgttgttattattattgttg 8565841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24135946 - 24135884
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||||||||| |||||| || |||||||||| |||||    
T  24135946 tttcttgtaaccc-tttgtaacactttcatcttagtgcattggatagctgctctctcccccaga 24135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 28537712 - 28537669
Alignment:
Q  76 atttgtatcactttcatcttagtggattggagaggtgctctctc 119  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||    
T  28537712 atttatatcacttttatcttagtggattggagagctgctctctc 28537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 39468479 - 39468348
Alignment:
Q  225 atttctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--ta 321  Q
    |||||||||||||||||||||| ||||||| ||| || ||| ||||| |  |||    ||||  ||||||||||||| |||| |||||||||||||  |     
T  39468479 atttctagattagatctaggtgctgttattgttgattattgtttgtgttcactt----tgatattggttactactttcctttgctccacacatcatagtt 39468384  T
Q  322 tttattggtgtgagatttgagtcccaattcacaaca 357  Q
    | ||||||||| || ||||||| | |||||||||||    
T  39468383 tgtattggtgtaagttttgagttcgaattcacaaca 39468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 3075629 - 3075548
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||  |||||| |||||| |||| |||||||||||||  |||  ||||||||||| ||| ||||| ||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaacaa 3075548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 33831921 - 33832007
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat 319  Q
    ||||||||||| |||||| || |||| ||||| ||||||||| |  |||    ||||| ||||||||||||| |||| |||||||||||||    
T  33831921 ctagattagatttaggtgctgctattgttgttattgcttgtgttcactt----tgattttggttactactttcctttgctccacacatcat 33832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 39774255 - 39774395
Alignment:
Q  16 aaaatgggcagaaattaggttgtgtt-ctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| || |||||||||||  |||| ||||||||||| ||   |||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||    
T  39774255 aaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgct 39774354  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    || ||| |||||| |||| ||||| ||||||| || |||||    
T  39774355 ctatcccccagagtaggtcatattggaccgaactgagttac 39774395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 16623287 - 16623380
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||  |||| |||||  |||||| |||||    
T  16623287 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggt 16623380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 18377506 - 18377384
Alignment:
Q  16 aaaatgggcagaaattagg--ttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||| ||||||||||  |||| ||||||||||||| ||   || ||||||| |||| ||||||||||||||||||||||||||| ||||| | |||    
T  18377506 aaaatgggtagaaattagggcttgt-ttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatggagggctgc 18377408  T
Q  114 tctctcctccagaggaggttatat 137  Q
    |||||||||||||| |||| ||||    
T  18377407 tctctcctccagagtaggtcatat 18377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 1983260 - 1983390
Alignment:
Q  25 agaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctcca 124  Q
    |||||||| ||| |||||||||||||||      ||||||||||||||| | ||||||||||||| ||| ||||||||||||||| |||| ||||| |||    
T  1983260 agaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatctccccca 1983359  T
Q  125 gaggaggttatattagaccgaattgggttac 155  Q
     || |||| ||||| ||||||| ||||||||    
T  1983360 tagtaggtcatattggaccgaactgggttac 1983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 26175562 - 26175436
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    |||||||||||||||||||||||||||||| | ||||||||| || |||    |||   ||||||||||||| |||| |||||||||||||  |||  ||    
T  26175562 ctagattagatctaggtgttgttattattgctattgcttgtgtttactt----tgaaattggttactactttcctttgctccacacatcatagtttgtat 26175467  T
Q  327 tggtgtgagatttgagtcccaattcacaaca 357  Q
    ||||||||| ||||||||| |||||||||||    
T  26175466 tggtgtgagttttgagtccgaattcacaaca 26175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 10047482 - 10047389
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  10047482 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 10047389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 36315224 - 36315316
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  36315224 ctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 36315316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 36329433 - 36329525
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  36329433 ctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 36329525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 5112340 - 5112244
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||| || ||| || || | ||||| ||||||| ||||||||    
T  5112340 ctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcacccccaaagtagatcatattggaccgaactgggttac 5112244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 5872060 - 5872184
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatttattg 328  Q
    |||||||||||||||||||||||||||||||||||| |||    || |  |||||||  ||||||||||||| |||| |||||||||||| | | |||||    
T  5872060 ctagattagatctaggtgttgttattattgttgttgtttg----tgttcactttgatattggttactactttcctttgctccacacatcagtttgtattg 5872155  T
Q  329 gtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||  |||||||||  |||||||||||    
T  5872156 gtgtga-ttttgagtccggattcacaacaa 5872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 16630674 - 16630741
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  16630674 ctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccaga 16630741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 34495822 - 34495885
Alignment:
Q  64 ttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagag 127  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagag 34495885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 46147321 - 46147194
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    ||||||||||||||||| ||||||||||||||||||||||    || |  |||||||  ||||||||||||| |||| |||||||||||||  |||  ||    
T  46147321 ctagattagatctaggtattgttattattgttgttgcttg----tgttcactttgatattggttactactttcctttgctccacacatcatagtttgcat 46147226  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| |||||| |  ||||||||||||    
T  46147225 tggtgtgagttttgaggcggaattcacaacaa 46147194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 357
Target Start/End: Complemental strand, 36463317 - 36463196
Alignment:
Q  233 attagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattggt 330  Q
    |||||||||||||||||||||||||||||||||||||| || |||    ||||  |||||| |||||| ||||||||||||||||||  | | |||| ||    
T  36463317 attagatctaggtgttgttattattgttgttgcttgtgtttactt----tgatattggttattactttcctttactccacacatcatagtttgtattagt 36463222  T
Q  331 gtgagatttgagtcccaattcacaaca 357  Q
    ||||  ||||||||| |||||||||||    
T  36463221 gtga-ttttgagtccgaattcacaaca 36463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 39246094 - 39246004
Alignment:
Q  62 atttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 39246004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 45687105 - 45686986
Alignment:
Q  237 gatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattggtgtga 334  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||  ||||||||||||| |||| ||||| |||||||  | | |||||||||||    
T  45687105 gatctaggtgttgttattattgttgttgcttg---ttgtttgctttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtga 45687009  T
Q  335 gatttgagtcccaattcacaacaa 358  Q
      ||||||||  ||||||||||||    
T  45687008 -ttttgagtctgaattcacaacaa 45686986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3777647 - 3777559
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| | |||||||||| |||  |||||||||| ||||||| |||||    
T  3777647 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggt 3777559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 5396670 - 5396758
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||| | |||||||||| ||||||||||||||| ||||||||||||||||  |||| ||||| ||||||| |||||    
T  5396670 tttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggt 5396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 3796513 - 3796574
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||| ||||| ||||||||||    
T  3796513 ctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcc 3796574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 12743851 - 12743727
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--at 326  Q
    |||||||||||||||||||||||||||||||||   |||||| || |||    |||   ||||||||||||| |||| ||||||||| |||  |||  ||    
T  12743851 ctagattagatctaggtgttgttattattgttg---cttgtgtttactt----tgaaattggttactactttcctttgctccacacaacatagtttgtat 12743759  T
Q  327 tggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||| ||||||||| ||||||||||||    
T  12743758 tggtgtgagttttgagtccgaattcacaacaa 12743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 36994761 - 36994802
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36994761 ctagattagatctaggtgttgttattattgttgttgcttgtg 36994802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 38152433 - 38152526
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||| |||||| |||||| |||||||| | ||||||||||||||| |||||||||| |||||  | || ||||| ||||||| |||||    
T  38152433 ctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggt 38152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 48893565 - 48893443
Alignment:
Q  232 gattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttattgg 329  Q
    ||||||||||||||| ||||||| ||||| ||||||||| || |||    ||||  ||||||||||||| |||| |||||||||||||  | | ||||||    
T  48893565 gattagatctaggtgctgttattgttgttattgcttgtgtttactt----tgatattggttactactttcctttgctccacacatcatagtttgtattgg 48893470  T
Q  330 tgtgagatttgagtcccaattcacaaca 357  Q
    |||||  ||||||||| |||||||||||    
T  48893469 tgtga-ttttgagtccgaattcacaaca 48893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 5350199 - 5350269
Alignment:
Q  288 tggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||||||||| ||||||| |||||| |    |||||||||||||||||||||||| ||||||||||||    
T  5350199 tggttactactttcctttacttcacacacctaagtttattggtgtgagatttgagtccgaattcacaacaa 5350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 358
Target Start/End: Complemental strand, 12739473 - 12739352
Alignment:
Q  232 gattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattattt--attgg 329  Q
    |||||||||||||||||||||||||| |||   |||||| || |||    |||   |||||||||||||  |||||||||||||||||  |||  |||||    
T  12739473 gattagatctaggtgttgttattattattg---cttgtgtttactt----tgaaattggttactactttcttttactccacacatcatagtttgtattgg 12739381  T
Q  330 tgtgagatttgagtcccaattcacaacaa 358  Q
    |||||| ||||||||| ||||||||||||    
T  12739380 tgtgagttttgagtccgaattcacaacaa 12739352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 37782011 - 37781905
Alignment:
Q  13 tgaaaaatgggcagaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||| |||||||| | | ||||||||||||| | ||   |||||||||||||||   ||||||||||||| ||  ||||||||||||||| |     
T  37782011 tgaaaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggagagtta 37781912  T
Q  113 ctctctc 119  Q
    |||||||    
T  37781911 ctctctc 37781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 357
Target Start/End: Original strand, 31474384 - 31474512
Alignment:
Q  224 aatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatt 323  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||| || |||    ||||  || ||||||||||  ||| || ||||||||||| ||    
T  31474384 aattcctagattagatctaggtgttgttattgttgttgttgtttgtgtttactt----tgatattgattactactttcatttgctacacacatcattgtt 31474479  T
Q  324 t--attggtgtgagatttgagtcccaattcacaaca 357  Q
    |  ||||||||||   |||||||| |||||||||||    
T  31474480 tgtattggtgtga---ttgagtccgaattcacaaca 31474512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 31985633 - 31985720
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  31985633 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc-ccagattaggtcatattggaccgaactgggt 31985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 47038341 - 47038213
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcat--tatttat 326  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| || |||    ||||  ||||||||||||| ||||  ||||||||||||  | | |||    
T  47038341 ctagattagatctaggtgttgttattgttgttattgtttgtgtttactt----tgatattggttactactttcctttgttccacacatcatagtttgtat 47038246  T
Q  327 tggtgtgagatttgagtcccaattcacaacaact 360  Q
    ||||||||  ||||||||| |||||||| |||||    
T  47038245 tggtgtga-ttttgagtccaaattcacagcaact 47038213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 28468542 - 28468590
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccaga 28468590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 42599567 - 42599626
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctc 119  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||| | |||||||||    
T  42599567 ctaatttcttgtaactcatt-gtaacattttcatcttagtggattggagggttgctctctc 42599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 24333912 - 24333825
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||| || |||||| |||||| ||| |||||| ||||||||||||||| |||||||||| ||| |  |||| ||||| |||||||    
T  24333912 ctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaa 24333825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 4588218 - 4588321
Alignment:
Q  253 ttattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattat-ttattggtgtgag-atttgagtcccaatt 350  Q
    |||||||||||| ||||||||||||    |||| |||||||||| ||| |||| ||||||||||||   | |||||||||||||  ||||||||| ||||    
T  4588218 ttattgttgttgtttgtgattgctt----tgatagtggttactattttcctttgctccacacatcaaagtattattggtgtgagtttttgagtccgaatt 4588313  T
Q  351 cacaacaa 358  Q
    ||||||||    
T  4588314 cacaacaa 4588321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 6743409 - 6743470
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||| ||||| ||| |||||| |||||||||| ||||||||||||| | ||||||||||    
T  6743409 ctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgctctctcc 6743470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 24969124 - 24969200
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| ||||||||| || |||||||||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  24969124 gaaaaatgggtagaaattagatt-tgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 24969200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 29254736 - 29254777
Alignment:
Q  229 ctagattagatctaggtgttgttattattgttgttgcttgtg 270  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  29254736 ctagattagatctaggtgttgttattattgtcgttgtttgtg 29254777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 5269204 - 5269272
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| |||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaa 5269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 9927385 - 9927257
Alignment:
Q  229 ctagattagatctaggtgttgttattattg-ttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatcattatttat- 326  Q
    |||||||| ||||||||| ||||||| ||| || ||||||||| || |||    ||||  |||| |||||||| |||| |||||||||||||  |||||     
T  9927385 ctagattaaatctaggtgctgttattgttgattattgcttgtgtttactt----tgatattggtaactactttcctttgctccacacatcatagtttata 9927290  T
Q  327 -tggtgtgagatttgagtcccaattcacaacaa 358  Q
     ||||| ||| ||||||||| ||||||||||||    
T  9927289 ttggtgcgagttttgagtccgaattcacaacaa 9927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 53345480 - 53345544
Alignment:
Q  291 ttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaa 355  Q
    |||||| ||||||||||||||||||||    |||||||||||||||||||| ||  |||||||||    
T  53345480 ttactatttttctttactccacacatctaagtttattggtgtgagatttgaatctgaattcacaa 53345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 379394 - 379468
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | ||||||||||||||| |||||||||| ||||    
T  379394 aaaatgggtagaaattaggtt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 6542114 - 6542027
Alignment:
Q  224 aatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggttactacttttctttactccacacatca 318  Q
    |||| ||||||||||||||||| |||   |||||||||||||||||||    || |||||||  |||||| |||||| |||| ||||||||||||    
T  6542114 aattcctagattagatctaggttttg---ttattgttgttgcttgtga----ttactttgatattggttattactttcctttgctccacacatca 6542027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12073406 - 12073480
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | ||||||| |||||||||||||||||| ||||    
T  12073406 aaaatgggtagaaattaggtt-tgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt 12073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24742038 - 24741976
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  24742038 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 24741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 29760739 - 29760677
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  29760739 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 29760677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 45687337 - 45687267
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctcttgta--ctaatttcttgtaactcatttgtatc 84  Q
    |||||||| |||||||||||| |||||||||||||||  |  |  |||||||||| |||||||||||||||    
T  45687337 aaaatgggaagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 52467508 - 52467434
Alignment:
Q  16 aaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||| |||||||||||| |||||||||||||||  ||| | ||||| ||||||||| |||||||||||||||    
T  52467508 aaaatgggtagaaattaggtt-tgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 39593864 - 39593764
Alignment:
Q  25 agaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctcca 124  Q
    |||||||||||||  ||||||||||| |  |  ||||||||||||||||| |||||||||||| | ||| ||||| | ||||||| | |||||||| |||    
T  39593864 agaaattaggttga-ttctttgtgagtttgtaaactaatttcttgtaacttatttgtatcactcttatcatagtgaagtggagagat-ctctctccccca 39593767  T
Q  125 gag 127  Q
    |||    
T  39593766 gag 39593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 52082542 - 52082462
Alignment:
Q  279 ctttgattgtggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 358  Q
    |||||||  ||||||||||||| ||||  |||||||||||| |||  |||||||||||  ||||||||| ||||||||||||    
T  52082542 ctttgatattggttactactttcctttgttccacacatcataatttgtattggtgtga-ttttgagtccgaattcacaacaa 52082462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 5147776 - 5147687
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||  |||||| |||||||||| || |||| ||||||| ||||| |||| ||| |  |||| ||||| ||||||| |||||    
T  5147776 tttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggt 5147687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 46147547 - 46147471
Alignment:
Q  14 gaaaaatgggcagaaattaggttgtgttctttgtgagctc-ttgta-ctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||| |||||||||| | ||||| |||||||||  ||| | |||||||||||||||||||||||||| ||||    
T  46147547 gaaaaatgggtagaaattagggt-tgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 46147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 10833 - 10739
Alignment:
Q  58 actaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  10833 actaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggt 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 8418 - 8506
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  8418 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 43960 - 44048
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  || | ||||| ||||||| |||||    
T  43960 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggt 44048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 5786 - 5693
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||||| || | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  5786 ctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggt 5693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 2595 - 2502
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||| ||| || |||||| |||||||||| ||||||||||||| | |||| ||||| |||||  |||| ||||| || |||| |||||    
T  2595 ctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggt 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 133279 - 133335
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||||    
T  133279 tttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 133335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 85785 - 85693
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||| | |||||||||||||  ||||||||| |||||  |||| ||||| ||| ||| |||||    
T  85785 ctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggt 85693  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 17951 - 18013
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  17951 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 18013  T

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Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 24044 - 24106
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  24044 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 24106  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 17366 - 17307
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctct 118  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||||| | ||||||||    
T  17366 ctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctct 17307  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 29506 - 29566
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatatt 138  Q
    |||||||||||||||||||||||||| ||||  || ||||||||| |||| |||| |||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatatt 29566  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 43338 - 43278
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatatt 138  Q
    |||||||||||||||||||||||||| ||||  || ||||||||| |||| |||| |||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatatt 43278  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 10515 - 10561
Alignment:
Q  27 aaattaggttgtgttctttgtgagctcttgtactaatttcttgtaac 73  Q
    |||||||| | |||||||||||||||||||| ||||||| |||||||    
T  10515 aaattagggtttgttctttgtgagctcttgtgctaatttattgtaac 10561  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 358
Target Start/End: Complemental strand, 27285 - 27249
Alignment:
Q  322 tttattggtgtgagatttgagtcccaattcacaacaa 358  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  27285 tttattgatgtgagatttgagtccgaattcacaacaa 27249  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 45329 - 45289
Alignment:
Q  86 ctttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||| ||||||||||||||| |||||||||| |||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccaga 45289  T

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