View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10949_high_23 (Length: 213)
Name: NF10949_high_23
Description: NF10949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10949_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 43413350 - 43413531
Alignment:
| Q |
17 |
gatataataacggacatatatgttggaccagtgttgttccttgtttggggttttccgaactttccatgcatttatgtgaagtgagtgagactgagattag |
116 |
Q |
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| T |
43413350 |
gatataataacggacatatatgttggaccagtgttgttccttgtttggggttttccgaactttccatgcatttatgtgaagtgagtgagactgagattag |
43413449 |
T |
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| Q |
117 |
agtctttacagagaaaataaaactttcccttgaatcatagaccagtattgatgaac-aaataatttatgaatattttaaatt |
197 |
Q |
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| T |
43413450 |
agtctttacagagaaaataaaactttcccttgaaatatagaccaatattgatgaacaaaataatttatgaatattttaaatt |
43413531 |
T |
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