View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10949_low_7 (Length: 477)

Name: NF10949_low_7
Description: NF10949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10949_low_7
NF10949_low_7
[»] chr8 (5 HSPs)
chr8 (21-318)||(26136378-26136675)
chr8 (326-460)||(26137070-26137206)
chr8 (21-94)||(23540507-23540580)
chr8 (17-65)||(10660855-10660903)
chr8 (35-95)||(12669096-12669155)
[»] chr1 (2 HSPs)
chr1 (208-318)||(47381619-47381729)
chr1 (21-95)||(20145992-20146066)
[»] chr5 (5 HSPs)
chr5 (21-93)||(23210376-23210448)
chr5 (21-93)||(20058910-20058983)
chr5 (21-95)||(25951093-25951167)
chr5 (21-103)||(20064739-20064821)
chr5 (21-90)||(17167571-17167639)
[»] chr7 (8 HSPs)
chr7 (21-95)||(31443545-31443619)
chr7 (28-95)||(4173719-4173786)
chr7 (31-93)||(18151869-18151930)
chr7 (21-95)||(14987358-14987431)
chr7 (21-95)||(15416969-15417042)
chr7 (21-71)||(7524993-7525043)
chr7 (31-92)||(2546778-2546838)
chr7 (28-65)||(20145704-20145741)
[»] chr3 (6 HSPs)
chr3 (21-95)||(29614872-29614946)
chr3 (21-106)||(9033759-9033844)
chr3 (28-95)||(7148572-7148639)
chr3 (28-95)||(16244375-16244442)
chr3 (21-94)||(15686723-15686795)
chr3 (21-98)||(27718245-27718321)
[»] scaffold0555 (1 HSPs)
scaffold0555 (21-93)||(5954-6026)
[»] chr2 (3 HSPs)
chr2 (21-95)||(20378804-20378878)
chr2 (21-92)||(18929103-18929173)
chr2 (39-95)||(24543649-24543704)
[»] chr6 (3 HSPs)
chr6 (28-93)||(31126444-31126509)
chr6 (35-93)||(1177518-1177576)
chr6 (51-95)||(32783893-32783937)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-93)||(376457-376529)


Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 318
Target Start/End: Original strand, 26136378 - 26136675
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagctacagaacgtgaaagt 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26136378 catgtcctaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagcaacagaacgtgaaagt 26136477  T
Q  121 gacatgatcgtgacccaacacaataaaataacgtgaatgtggctgaaaattctttttgaaaatagattttgaaaatttaaaatcaacttacccacttaat 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26136478 gacatgatcgtgacccaacacaataaaataacgtgaaagtggctgaaaattcttttttaaaatagattttgaaaatttaaaatcaacttacccacttaat 26136577  T
Q  221 tatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgtagagagcaata 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26136578 tatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgtagagagcaata 26136675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 326 - 460
Target Start/End: Original strand, 26137070 - 26137206
Alignment:
Q  326 aaagattatagagagcaaatacagcaaaaat--ataaatgttataagagttaagtgtatggaaatgcataaggacataattggccgagattgaatgatac 423  Q
    ||||||||||||||||||||||||||||||   |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26137070 aaagattatagagagcaaatacagcaaaaaataataaatgttataggagttgagtgtatggaaatgcataaggacataattggccaagattgaatgatac 26137169  T
Q  424 aatttataagatgtcaataacttttcttgttcgttct 460  Q
    |||||||||||||||||||||||||||| ||||||||    
T  26137170 aatttataagatgtcaataacttttcttcttcgttct 26137206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 23540507 - 23540580
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacacc 94  Q
    |||||| ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||    
T  23540507 catgtcctaggatctctggtttggtccttcatgttataatgaaaatcagtcagtatttgtttaccaaaaacacc 23540580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 10660903 - 10660855
Alignment:
Q  17 acatcatgtcttaggatctctggtttggtcctgcttgttataatcaaaa 65  Q
    |||| ||||| |||||||||||||||||||||||| || ||||||||||    
T  10660903 acataatgtcctaggatctctggtttggtcctgctcgtaataatcaaaa 10660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 12669096 - 12669155
Alignment:
Q  35 tctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||||| |||||||||| |||||||||| ||| | ||||| |||||||||||||||||    
T  12669096 tctggtttgatcctgcttgtaataatcaaaaccagcccgtatt-gtttaccaaaaacaccg 12669155  T

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Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 47381619 - 47381729
Alignment:
Q  208 ttacccacttaattatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgt 307  Q
    |||||||||||||| || | ||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||| ||||||| |||    
T  47381619 ttacccacttaattgtccgctagtttggatattaccttacataaacttctttaaaagttatgcttcaattttgtgctaaagagagtctaccaattactgt 47381718  T
Q  308 agagagcaata 318  Q
    |||||||||||    
T  47381719 agagagcaata 47381729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 20146066 - 20145992
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||| |||| ||||| ||| ||||||| |||| || ||||||||||||| | ||||||||||    
T  20146066 catgtcctaggatctctagtttagtccttcttattataattaaaaccaatcggtatttgttttctaaaaacaccg 20145992  T

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Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 23210376 - 23210448
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23210376 catgtcctaggatctctggtttcgtccttcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 23210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 20058910 - 20058983
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggta-tttgtttaccaaaaacac 93  Q
    |||||| |||||||||||||||||||||  |||||||||| |||| ||||||||| ||||||||||||||||||    
T  20058910 catgtcataggatctctggtttggtcctttttgttataatgaaaaccagtcggtattttgtttaccaaaaacac 20058983  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 25951167 - 25951093
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |  ||||| ||| ||||| ||||||||||||    
T  25951167 catgtcctaggatctctggtttgatcctgcttgttataatcaatactagtcgatatctgtttgccaaaaacaccg 25951093  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 20064739 - 20064821
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacag 103  Q
    |||||| ||| || |||||||| ||||| ||||||||||||| || |||||||||||||||||||| ||| || |||| ||||    
T  20064739 catgtcctagaatatctggttttgtccttcttgttataatcacaaccagtcggtatttgtttaccataaatactgataaacag 20064821  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 17167571 - 17167639
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaa 90  Q
    |||||| |||||| | ||||||  |||||||||| |||||||||||||| | ||| ||||||||||||||    
T  17167571 catgtcctaggatttatggttttatcctgcttgtaataatcaaaatcagcccgta-ttgtttaccaaaaa 17167639  T

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Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 31443545 - 31443619
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  31443545 catgtcctaggatctctgatttggtccttcttgttataatcaaaaccagtcggtatttgtttaccaaaaacaccg 31443619  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 4173719 - 4173786
Alignment:
Q  28 taggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||||||||| |||||||| ||||||||||| || | |||||||||||||||||||||||||||||    
T  4173719 taggatctctggattggtccttcttgttataataaacaccagtcggtatttgtttaccaaaaacaccg 4173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 18151869 - 18151930
Alignment:
Q  31 gatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||    
T  18151869 gatctctggtttggtcatgcttgtaataatcaaaatcagcccgta-ttgtttaccaaaaacac 18151930  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 14987358 - 14987431
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||||||||||| ||||| || |||||||||| ||  | ||| |||||||||||||||||||    
T  14987358 catgtcctaggatctctggtttggtactgctcgtaataatcaaaaccaacccgta-ttgtttaccaaaaacaccg 14987431  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 15416969 - 15417042
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||||||||||| ||||| || |||||||||| ||  | ||| |||||||||||||||||||    
T  15416969 catgtcctaggatctctggtttggtactgctcgtaataatcaaaaccaacccgta-ttgtttaccaaaaacaccg 15417042  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 7524993 - 7525043
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtc 71  Q
    ||||||||||||| ||||||||| |||| ||||| |||| |||||||||||    
T  7524993 catgtcttaggatttctggtttgatcctacttgtaataaccaaaatcagtc 7525043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 2546838 - 2546778
Alignment:
Q  31 gatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaaca 92  Q
    ||||| ||||||||||||||| || |||||||||||||| |  || ||||||||||||||||    
T  2546838 gatctatggtttggtcctgctcgtaataatcaaaatcagcccata-ttgtttaccaaaaaca 2546778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 20145741 - 20145704
Alignment:
Q  28 taggatctctggtttggtcctgcttgttataatcaaaa 65  Q
    |||||||||||||||||||||||| || ||||||||||    
T  20145741 taggatctctggtttggtcctgctcgtaataatcaaaa 20145704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 29614872 - 29614946
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||| ||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  29614872 catgttttaggatatttggtttggtcctgcttgttataatcaaaagcagtcagtatttgtttaccaaaaacaccg 29614946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 9033759 - 9033844
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagcta 106  Q
    |||||| |||||||||| ||||||| || |||||||||||||||| ||||| |||||| ||||||| |||||| |||| |||||||    
T  9033759 catgtcctaggatctctagtttggttcttcttgttataatcaaaaccagtcagtatttatttaccataaacactgataaacagcta 9033844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 7148639 - 7148572
Alignment:
Q  28 taggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| ||| |||||||||||||||||||||| |||| || ||| ||| ||||| ||||||||||||    
T  7148639 taggatatcttgtttggtcctgcttgttataataaaaaacactcgatatctgtttgccaaaaacaccg 7148572  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 16244375 - 16244442
Alignment:
Q  28 taggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||| |||||||||||||||||| ||||||||||| || ||   |||||||| ||||||||||||    
T  16244375 taggatccctggtttggtcctgcttggtataatcaaaaccaatcaacatttgtttgccaaaaacaccg 16244442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 15686795 - 15686723
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacacc 94  Q
    |||||| ||||||||||| |||||||||||| || |||||||||||||| | ||| |||||  |||||||||||    
T  15686795 catgtcctaggatctctgatttggtcctgctcgtaataatcaaaatcagcccgta-ttgttcgccaaaaacacc 15686723  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 27718245 - 27718321
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgata 98  Q
    ||||||| || || |||| |||| || ||||||| ||||||||||||| ||  | |||||||||||||||||||||||    
T  27718245 catgtctaagaatttctgatttgatcatgcttgtaataatcaaaatcaatcctt-tttgtttaccaaaaacaccgata 27718321  T

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Target: scaffold0555 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 5954 - 6026
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  5954 catgtcctaggatctctagtttgctccttcttgttataatcaaaatcagtcggtatttgtttatcaaaaacac 6026  T

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Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 20378878 - 20378804
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||| |||||||||| | |||||||||||||| || ||||||||||||||||||||||||||    
T  20378878 catgtcctaggatctcttgtttggtccttcctgttataatcaaaaccaatcggtatttgtttaccaaaaacaccg 20378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 18929173 - 18929103
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaaca 92  Q
    |||||| |||||||||||||||||||||||| || |||||||||| ||| | ||| ||||||||||||||||    
T  18929173 catgtcctaggatctctggtttggtcctgctcgtaataatcaaaaccagcccgta-ttgtttaccaaaaaca 18929103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 24543704 - 24543649
Alignment:
Q  39 gtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||| || ||||||| |||||||||||||| | ||||| |||||||||||||||||    
T  24543704 gtttgatcatgcttgtaataatcaaaatcagcccgtatt-gtttaccaaaaacaccg 24543649  T

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Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 31126444 - 31126509
Alignment:
Q  28 taggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  31126444 taggatctctggtttgatccttcttgttataatcaaaatcagtctgtatttatttaccaaaaacac 31126509  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 1177518 - 1177576
Alignment:
Q  35 tctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||    
T  1177518 tctggtttggtccttcttattataatcaaaaccagtcagtatttgtttaccaaaaacac 1177576  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 32783937 - 32783893
Alignment:
Q  51 ttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||    
T  32783937 ttgttataatcaaaaccagtcggtattagtttatcaaaaacaccg 32783893  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 376457 - 376529
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| |||||| ||||||||| |||| ||||| |||||||||| ||| |  |  |||||||||||||||||    
T  376457 catgtcctaggatttctggtttgatcctccttgtaataatcaaaaccagccccttattgtttaccaaaaacac 376529  T

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