View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1094_low_11 (Length: 277)
Name: NF1094_low_11
Description: NF1094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1094_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 18351608 - 18351818
Alignment:
| Q |
41 |
atcacttttatgataagtgtgaacagtatacattttaatatatacttttcaatacaagtcttgctgttagtcaaa-tttaaattggagccactaaataat |
139 |
Q |
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| T |
18351608 |
atcacttttatgataagtgtgaacaatatacattttaatatatacttttcaataccagtcttgctgatagtcaaaatttaaattggagccactaaataat |
18351707 |
T |
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| Q |
140 |
gtggatttaacattaatttagtcagacccatatgaattttagtaaatacaaagacatgtgattaaaatagtgtattgctagcatttttcttgttttaatt |
239 |
Q |
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| T |
18351708 |
atggatttaacattaatttagtcagacccgtatgaattttagtaaatacaaagacatgtaattaaaatagtgtattgctagcatttttcttattttaatt |
18351807 |
T |
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| Q |
240 |
tgaaatatatg |
250 |
Q |
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||||||||||| |
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| T |
18351808 |
tgaaatatatg |
18351818 |
T |
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