View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10950_low_10 (Length: 368)
Name: NF10950_low_10
Description: NF10950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10950_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 3 - 350
Target Start/End: Complemental strand, 32726552 - 32726205
Alignment:
| Q |
3 |
acaacaacaacaacgacaataaaaacgcaagaagttggtgatgattcaaaagggctaaaactagtgcacctattgatggctggcgcggaagccttaaccg |
102 |
Q |
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| T |
32726552 |
acaacaacaacaacggcaataaaaacgcatgaagttggtgatgattcaaaagggctaaaactagtgcacctattgatggctggcgcggaagccttaaccg |
32726453 |
T |
|
| Q |
103 |
gttcaaccaaaaaccgtgacttagctcgagtgatattgatccggctcaaggaattagtctcacaacatgctaacggctccaacatggagagacttgccgc |
202 |
Q |
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| T |
32726452 |
gttcaaccaaaaaccgtgacttagctcgagtgatattgatccggctcaaggaattagtctcacaacatgctaacggctccaacatggagagacttgccgc |
32726353 |
T |
|
| Q |
203 |
tcatttcaccgaagcccttcatggactactagaaggtgctgggggtgcgcataataaccaccatcaccacgacaacaacaaacattacctcaccacaaac |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32726352 |
tcatttcaccgaagcccttcatggactactagaaggtgctgggggtgcgcataataaccaccatcaccacaacaacaacaaacattacctcaccacaaat |
32726253 |
T |
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| Q |
303 |
ggtccccgcgacaaccaaaacgacacacttgctgctttccaactactt |
350 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32726252 |
ggtccccacgacaaccaaaacgacacacttgctgctttccaactactt |
32726205 |
T |
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