View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10950_low_2 (Length: 592)

Name: NF10950_low_2
Description: NF10950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10950_low_2
NF10950_low_2
[»] chr4 (5 HSPs)
chr4 (138-265)||(8432819-8432946)
chr4 (138-265)||(47826128-47826255)
chr4 (138-265)||(46164217-46164344)
chr4 (138-265)||(54784943-54785070)
chr4 (138-219)||(21604595-21604676)
[»] chr2 (1 HSPs)
chr2 (138-265)||(25697406-25697533)
[»] chr1 (5 HSPs)
chr1 (138-265)||(26014620-26014747)
chr1 (138-265)||(29599097-29599229)
chr1 (138-219)||(48184402-48184483)
chr1 (138-217)||(324837-324916)
chr1 (138-230)||(26355245-26355338)
[»] chr7 (7 HSPs)
chr7 (138-265)||(6472083-6472210)
chr7 (138-219)||(21357891-21357972)
chr7 (138-219)||(35012764-35012845)
chr7 (138-219)||(9371979-9372060)
chr7 (74-139)||(27656838-27656903)
chr7 (236-265)||(21357971-21358000)
chr7 (236-265)||(35012844-35012873)
[»] chr5 (3 HSPs)
chr5 (138-265)||(10572856-10572983)
chr5 (138-265)||(32863785-32863912)
chr5 (74-133)||(37606029-37606088)
[»] chr8 (5 HSPs)
chr8 (138-265)||(29182421-29182553)
chr8 (138-219)||(22432160-22432241)
chr8 (138-219)||(27576938-27577019)
chr8 (138-230)||(6786676-6786769)
chr8 (236-265)||(22432240-22432269)
[»] chr3 (1 HSPs)
chr3 (138-219)||(9456583-9456664)
[»] chr6 (3 HSPs)
chr6 (74-133)||(31559487-31559546)
chr6 (138-209)||(25106272-25106345)
chr6 (197-230)||(32397470-32397503)


Alignment Details
Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 8432819 - 8432946
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8432819 attatttaaacacaagtaacagttcagtagtaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 8432918  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  8432919 ctgtagtaatcagtagcaatcgaaaact 8432946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 47826255 - 47826128
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47826255 attatttaaacacaagtaacagttcagtagtaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 47826156  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  47826155 ctgtagtaatcagtagcaatcgaaaact 47826128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 46164217 - 46164344
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46164217 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttgtaaaccataataataagcagaacattcatgtcttagtaaaacattctgagtt 46164316  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  46164317 ctgtagtaatcagtagcaatcgaaaact 46164344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 54784943 - 54785070
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54784943 attatttaaacaagagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttactgaaacattcagagtt 54785042  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||| || |||||||||||||||||||||    
T  54785043 ctgaagcaatcagtagcaatcgaaaact 54785070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 21604676 - 21604595
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21604676 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 21604595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 25697406 - 25697533
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25697406 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattctgagtt 25697505  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  25697506 ctgtagtaatcagtagcaatcgaaaact 25697533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 26014747 - 26014620
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26014747 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataatcagaacattcatgtcttagtaaaacattcagagtt 26014648  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  26014647 ctgtagtaatcagtagcaatcgaaaact 26014620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 29599097 - 29599229
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatg-----tcttagtaaaacattca 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  29599097 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttatcttagtaaaacattca 29599196  T
Q  233 gagttctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||| |||||||||||||    
T  29599197 gagttctgtagtaatcagtggcaatcgaaaact 29599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 48184483 - 48184402
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48184483 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 48184402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 324916 - 324837
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  324916 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtc 324837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 26355338 - 26355245
Alignment:
Q  138 attatttaaacacaagtaacag-ttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacatt 230  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  26355338 attatttaaacacaagtaacgggttcagtagcaatcagagttcatgttctaaaccatagtaataagcagaacattcatgtcttactaaaacatt 26355245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 6472083 - 6472210
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  6472083 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacagtctgagtt 6472182  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  6472183 ctgtagtaatcagtagcaatcgaaaact 6472210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 21357891 - 21357972
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21357891 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 21357972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 35012764 - 35012845
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35012764 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 35012845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 9372060 - 9371979
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9372060 attatttaaacacaagtaacagttcagtagaaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 9371979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 27656903 - 27656838
Alignment:
Q  74 tattgagtaacagtgtatggtgtcatatttgtgtttgtattattgtgtttacttatcatttctgat 139  Q
    ||||||| |||||| |||||| |||| |||||||||||||| ||||||||||||||||||| ||||    
T  27656903 tattgaggaacagtctatggtatcatttttgtgtttgtatttttgtgtttacttatcatttatgat 27656838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 21357971 - 21358000
Alignment:
Q  236 ttctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||||    
T  21357971 ttctgtagtaatcagtagcaatcgaaaact 21358000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 35012844 - 35012873
Alignment:
Q  236 ttctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||||    
T  35012844 ttctgtagtaatcagtagcaatcgaaaact 35012873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 4e-61; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 10572983 - 10572856
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10572983 attatttaaacacaagaaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattctgagtt 10572884  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  10572883 ctgtagtaatcagtagcaatcgaaaact 10572856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 32863912 - 32863785
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacattcagagtt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  32863912 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttggtaaaacattctgagtt 32863813  T
Q  238 ctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||    
T  32863812 ctgtagtaatcagtagcaatcgaaaact 32863785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 37606029 - 37606088
Alignment:
Q  74 tattgagtaacagtgtatggtgtcatatttgtgtttgtattattgtgtttacttatcatt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37606029 tattgagtaacagtgtatggtgtcatatttgtgtttgtattattgtgtttacttatcatt 37606088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 6e-57; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 29182421 - 29182553
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatg-----tcttagtaaaacattca 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  29182421 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttatcttagtaaaacattca 29182520  T
Q  233 gagttctgtagtaatcagtagcaatcgaaaact 265  Q
    |||||||||||||||||||||||||||||||||    
T  29182521 gagttctgtagtaatcagtagcaatcgaaaact 29182553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 22432160 - 22432241
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22432160 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 22432241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 27577019 - 27576938
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27577019 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 27576938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 6786769 - 6786676
Alignment:
Q  138 attatttaaacacaagtaacag-ttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtcttagtaaaacatt 230  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  6786769 attatttaaacacaagtaacgggttcagtagcaatcagagttcatgttctaaaccatagtaataagcagaacattcatgtcttactaaaacatt 6786676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 22432240 - 22432269
Alignment:
Q  236 ttctgtagtaatcagtagcaatcgaaaact 265  Q
    ||||||||||||||||||||||||||||||    
T  22432240 ttctgtagtaatcagtagcaatcgaaaact 22432269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 9456664 - 9456583
Alignment:
Q  138 attatttaaacacaagtaacagttcagtagcaatcagagttcatgttctaaaccataataataagcagaacattcatgtctt 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9456664 attatttaaacacaagtaacagttcagtagcaatcagatttcatgttctaaaccataataataagcagaacattcatgtctt 9456583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 31559546 - 31559487
Alignment:
Q  74 tattgagtaacagtgtatggtgtcatatttgtgtttgtattattgtgtttacttatcatt 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31559546 tattgagtaacagtgtatggtgtcatatttatgtttgtattattgtgtttacttatcatt 31559487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 25106272 - 25106345
Alignment:
Q  138 attatttaaacacaagtaa-cagttc-agtagcaatcagagttcatgttctaaaccataataataagcagaaca 209  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  25106272 attatttaaacacaagtaaacagttctagtagcaaccagagttcatgttcaaaaccataataataagcagaaca 25106345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 32397503 - 32397470
Alignment:
Q  197 aataagcagaacattcatgtcttagtaaaacatt 230  Q
    |||||||||||||||||||||||| |||||||||    
T  32397503 aataagcagaacattcatgtcttactaaaacatt 32397470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University