View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10950_low_41 (Length: 204)
Name: NF10950_low_41
Description: NF10950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10950_low_41 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 49581724 - 49581535
Alignment:
| Q |
1 |
tgttagttagttacctccatggaagcagaagaaggagaagaagacccacgggagacccgcatgaagctgcaaaaacggatcatgatggttatacaccgat |
100 |
Q |
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| T |
49581724 |
tgttagttagttacctccatggaagcagaagaaggagaagaagacccaggggagacccgcatgaagctgcaaaaacggatcatgatggtaatacaccgat |
49581625 |
T |
|
| Q |
101 |
ctgtaagttgtagattgaaaataaagaaaacgtgaagaaaacaattatatacaa-aaaattagatatcatatatttatgtataaatatat |
189 |
Q |
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| T |
49581624 |
ctgtaagttgtagattgaaaataaagaaaacgtgaagaaaacaattatatacaaaaaaattagatatcgtatatttatgtataaatatat |
49581535 |
T |
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