View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10951_high_14 (Length: 331)
Name: NF10951_high_14
Description: NF10951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10951_high_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 7 - 331
Target Start/End: Complemental strand, 43020595 - 43020274
Alignment:
| Q |
7 |
acatgtccgtcaaaaatactatacaataatatctaataatacagcaggaaattaaaagttcgaatctaatgaagaataaagcaaataaagatgtgtctgt |
106 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020595 |
acatgtccgtcaaaaatactatacaatag---ctaataatacagcaggaaattaaaagttcgaatctaatgaagaataaagcaaataaagatgtgtctgt |
43020499 |
T |
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| Q |
107 |
ctcctagttagtaccactctcttctcttttctgaaaaacaaattaagaaagttaaaagaaccttgcatatgtaaatttatacatgttgtattcaaaatta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020498 |
ctcctagttagtaccactctcttctcttttctgaaaaacaaattaagaaaattaaaagaaccttgcatatgtaaatttatacatgttgtattcaaaatta |
43020399 |
T |
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| Q |
207 |
aagattactgaaaatattcggataggaaaatttgaagtcagctccctctacacgtagatgccttcaaacattgataagaagttaaaattcaaaacagaaa |
306 |
Q |
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|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020398 |
aagattactgaaaatattcggataggaaaatttgaaatcaactccctctacacgtagatgccttcaaacattgataagaagttaaaattcaaaacagaaa |
43020299 |
T |
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| Q |
307 |
agatagtgtgtgtcgtttgtgccct |
331 |
Q |
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||||||||||||||||||||||||| |
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| T |
43020298 |
agatagtgtgtgtcgtttgtgccct |
43020274 |
T |
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