View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10951_low_18 (Length: 312)

Name: NF10951_low_18
Description: NF10951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10951_low_18
NF10951_low_18
[»] chr6 (6 HSPs)
chr6 (16-303)||(22615004-22615295)
chr6 (152-210)||(16554073-16554131)
chr6 (152-210)||(16630629-16630687)
chr6 (152-210)||(16652335-16652393)
chr6 (152-210)||(34166281-34166339)
chr6 (152-210)||(16568361-16568419)
[»] chr7 (7 HSPs)
chr7 (152-210)||(6593246-6593304)
chr7 (152-210)||(18390884-18390942)
chr7 (152-213)||(48490797-48490858)
chr7 (152-213)||(47674852-47674913)
chr7 (131-224)||(38281303-38281396)
chr7 (152-200)||(26214193-26214241)
chr7 (154-215)||(25559989-25560050)
[»] chr4 (9 HSPs)
chr4 (152-210)||(7124105-7124163)
chr4 (152-210)||(5137489-5137547)
chr4 (152-210)||(8394815-8394873)
chr4 (152-210)||(54881979-54882037)
chr4 (152-210)||(12740447-12740505)
chr4 (152-210)||(12748653-12748711)
chr4 (82-163)||(35371596-35371677)
chr4 (152-248)||(26559027-26559122)
chr4 (152-209)||(34571315-34571369)
[»] chr3 (16 HSPs)
chr3 (152-213)||(7763661-7763722)
chr3 (152-210)||(4599432-4599490)
chr3 (152-210)||(10057642-10057700)
chr3 (152-210)||(10059864-10059922)
chr3 (152-210)||(10062086-10062144)
chr3 (152-210)||(10064308-10064366)
chr3 (152-210)||(10066530-10066588)
chr3 (152-210)||(10210595-10210653)
chr3 (152-213)||(29812262-29812323)
chr3 (152-210)||(6717906-6717964)
chr3 (152-210)||(9635213-9635271)
chr3 (152-210)||(23198853-23198911)
chr3 (153-203)||(1619605-1619655)
chr3 (152-210)||(5259037-5259095)
chr3 (152-200)||(32892494-32892542)
chr3 (118-213)||(43403138-43403233)
[»] chr1 (9 HSPs)
chr1 (152-213)||(28222138-28222199)
chr1 (152-213)||(28221767-28221828)
chr1 (152-213)||(776465-776526)
chr1 (152-213)||(13548397-13548458)
chr1 (152-213)||(50168065-50168126)
chr1 (152-203)||(13126499-13126550)
chr1 (152-210)||(28242980-28243038)
chr1 (152-213)||(31658533-31658594)
chr1 (16-110)||(31928881-31928977)
[»] chr8 (6 HSPs)
chr8 (152-210)||(34255220-34255278)
chr8 (152-215)||(31574663-31574726)
chr8 (152-210)||(4733026-4733084)
chr8 (152-213)||(42436329-42436390)
chr8 (116-215)||(7445662-7445762)
chr8 (133-224)||(10379748-10379839)
[»] chr5 (10 HSPs)
chr5 (152-210)||(16545837-16545895)
chr5 (152-210)||(29721768-29721826)
chr5 (152-210)||(40381513-40381571)
chr5 (153-215)||(13295031-13295093)
chr5 (152-210)||(16408695-16408753)
chr5 (41-215)||(32608692-32608865)
chr5 (152-213)||(535127-535188)
chr5 (152-210)||(26174175-26174233)
chr5 (152-195)||(42427146-42427189)
chr5 (152-224)||(13693995-13694067)
[»] chr2 (7 HSPs)
chr2 (123-212)||(28521650-28521739)
chr2 (126-201)||(16604650-16604725)
chr2 (152-215)||(28569186-28569249)
chr2 (141-202)||(27894184-27894245)
chr2 (134-198)||(16676809-16676873)
chr2 (142-234)||(7858536-7858628)
chr2 (152-200)||(14634714-14634762)
[»] scaffold1908 (1 HSPs)
scaffold1908 (152-210)||(758-816)
[»] scaffold0491 (1 HSPs)
scaffold0491 (152-210)||(9631-9689)
[»] scaffold0219 (1 HSPs)
scaffold0219 (167-215)||(23084-23132)


Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 303
Target Start/End: Complemental strand, 22615295 - 22615004
Alignment:
Q  16 cattcttcaacccccgaaacgt--tcggtcctctttaagaattcttttgcttaaaactatagtctaacacccatggtctccgta--gtcataccattcca 111  Q
    ||||||||||||||| ||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22615295 cattcttcaacccccaaaacgtcttccgtcctctttaagaattattttgcttaaaactatagtctaacacccatggtctccgtatagtcataccattcca 22615196  T
Q  112 gtatcatcaacttgtctcttcctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcc 211  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22615195 gtgtcatcaacttgtctcttcctagtcctactagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcc 22615096  T
Q  212 tttccctttgtaaactacaccttaatggatgatcatggattacctaaactttaacttgtcaccaccctttgagttaccgcggtttcctttgc 303  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  22615095 tttccctttgtaaactacaccttaatggctgatcatggattacctaaactttaacttttcaccaccctttgagttaccgttgtttcctttgc 22615004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16554131 - 16554073
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  16554131 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 16554073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16630687 - 16630629
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  16630687 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 16630629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16652393 - 16652335
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  16652393 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 16652335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 34166339 - 34166281
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  34166339 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 34166281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16568419 - 16568361
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    |||||||||||||||||| |||| |||||||| |||||||||  |||||  ||||||||    
T  16568419 actccacctcaagttgagatttctctacctcaacttccaaattagtacacacactatgc 16568361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 6593246 - 6593304
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  6593246 actccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgc 6593304  T

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Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 18390884 - 18390942
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18390884 actccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgc 18390942  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 48490858 - 48490797
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  48490858 actccacctcaagttgagctttctctacctcaacttccaaatgcgtacacacactatgcctt 48490797  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 47674852 - 47674913
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  47674852 actccaccttaagttgagctttctctacctcaacttccaaatgcgtacacacactatgcctt 47674913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 38281396 - 38281303
Alignment:
Q  131 tcctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttccctttgtaa 224  Q
    ||||||||| | |||| |||||||| | |||||||||||||||| | |||||| |||||||||| ||||||||  |||| ||||| | ||||||    
T  38281396 tcctagtcccactagtggaagactcaaactcaagttgagctttctccacctcaacttccaaatgtgtacatcctatatgtctttcaccttgtaa 38281303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 26214241 - 26214193
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtaca 200  Q
    ||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  26214241 actccacctcaagctgagctttatctacctcaacttccaaatgcgtaca 26214193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 25560050 - 25559989
Alignment:
Q  154 tccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    ||||||||||| |||| |||  |||||| | |||||||||| |||| |||||||||||||||    
T  25560050 tccacctcaagctgagatttttctaccttaacttccaaatgagtacttccactatgcctttc 25559989  T

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Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 7124163 - 7124105
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  7124163 actccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgc 7124105  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 5137547 - 5137489
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  5137547 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 5137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 8394873 - 8394815
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  8394873 actccacctcaagttgagctttcgctacctcaacttccaaatgagtacttccactatgc 8394815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 54882037 - 54881979
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||  ||||||||    
T  54882037 actccacctcaagttgagctttctctacctcaacttccaaatgtgtacacacactatgc 54881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 12740447 - 12740505
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    |||| |||||||||||||||||| |||||||| |||||||||| |||||  ||||||||    
T  12740447 actctacctcaagttgagctttctctacctcaacttccaaatgagtacacacactatgc 12740505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 12748653 - 12748711
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    |||| |||||||||||||||||| |||||||| |||||||||| |||||  ||||||||    
T  12748653 actctacctcaagttgagctttctctacctcaacttccaaatgagtacacacactatgc 12748711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 35371596 - 35371677
Alignment:
Q  82 acccatggtctccgtagtcataccattccagtatcatcaacttgtctcttcctagtcctattagtagaagactccacctcaa 163  Q
    ||||||||| ||| ||||| |||||||  ||| || |||||||||||| ||||||||  | |||| ||||||||||||||||    
T  35371596 acccatggtttccatagtcgtaccattatagtgtcttcaacttgtctcctcctagtctcactagtggaagactccacctcaa 35371677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 26559122 - 26559027
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttccctttgtaaactacaccttaatggatgatcatg 248  Q
    ||||||||| | | ||||||||| |||| ||| ||| ||||||||| ||||||||||| ||||| ||||| ||||| ||||| || || ||||||||    
T  26559122 actccaccttacgatgagctttctctacatcaacttgcaaatgcgtgcatccactatgactttcactttg-aaactccacctcaaaggttgatcatg 26559027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 34571315 - 34571369
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatg 209  Q
    |||||||||||||||||||||    ||||||| ||||||||||||||||| |||||||    
T  34571315 actccacctcaagttgagctta---tacctcaacttccaaatgcgtacatacactatg 34571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 7763722 - 7763661
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||||    
T  7763722 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcctt 7763661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 4599432 - 4599490
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  4599432 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 4599490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10057700 - 10057642
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10057700 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 10057642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10059922 - 10059864
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10059922 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 10059864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10062144 - 10062086
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10062144 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 10062086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10064366 - 10064308
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10064366 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 10064308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10066588 - 10066530
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10066588 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 10066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 10210653 - 10210595
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  10210653 actccacctcaagttgagctttctctacctcaacttccaaatgggtacttccactatgc 10210595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29812323 - 29812262
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  29812323 actccaccttaagttgagctttctctacctcaacttccaaatgcgtacacacactatgcctt 29812262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 6717964 - 6717906
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| |||| ||||||||||    
T  6717964 actccacctcaagttgaactttctctacctcaacttccaaatgagtacttccactatgc 6717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 9635213 - 9635271
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  9635213 actccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 9635271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 23198853 - 23198911
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  23198853 actccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 23198911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 1619605 - 1619655
Alignment:
Q  153 ctccacctcaagttgagctttcactacctcaccttccaaatgcgtacatcc 203  Q
    |||||||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  1619605 ctccacctcaagctgaactttctctacctcaacttccaaatgcgtacatcc 1619655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 5259037 - 5259095
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||  ||||||||||    
T  5259037 actccaccttaagttgagctttctctacctcaacttccaaatgagtatttccactatgc 5259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 32892542 - 32892494
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtaca 200  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||||||||    
T  32892542 actccacctcaagttgagctttctctgcctcaactttcaaatgcgtaca 32892494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 43403138 - 43403233
Alignment:
Q  118 tcaacttgtctcttcctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    |||||||||||| ||||||||  | |||   || ||||||||||||| |||| |||| | |||||| |||||||| |||||||  |||||||||||    
T  43403138 tcaacttgtctcctcctagtctcactagagaaacactccacctcaagctgagatttctccacctcaacttccaaacgcgtacacacactatgcctt 43403233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 28222138 - 28222199
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  28222138 actccacctcaagttgagctttctctacctcaacttccaaatgcgtacacacactatgcctt 28222199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 28221767 - 28221828
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||    
T  28221767 actccacctcaagttgagctttctctacctcaacttccaaatgcatacacacactatgcctt 28221828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 776526 - 776465
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||| |  |||||||||||    
T  776526 actccacctcaagttgagctttatctacctcaacttccaaatgcgtatacacactatgcctt 776465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 13548397 - 13548458
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||| ||||||||||||| |||||| | ||||||||||||||||  |||||||||||    
T  13548397 actccaccttaagttgagctttctctaccttaacttccaaatgcgtacacacactatgcctt 13548458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 50168065 - 50168126
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    |||||||||||||||||| |||| |||||||| |||||||||| |||||  |||||||||||    
T  50168065 actccacctcaagttgagttttctctacctcaacttccaaatgtgtacacacactatgcctt 50168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 13126499 - 13126550
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatcc 203  Q
    |||||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  13126499 actccacctctagctgagctttctctacctcaacttccaaatgcgtacatcc 13126550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 28243038 - 28242980
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    |||||||||| |||||||||||| |||||||| |||||||||| |||||  ||||||||    
T  28243038 actccacctctagttgagctttctctacctcaacttccaaatgtgtacacacactatgc 28242980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 31658594 - 31658533
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||||||||||||||||| |||||||| | ||||||||| ||||  ||| |||||||    
T  31658594 actccacctcaagttgagctttctctacctcaacgtccaaatgcttacacacaccatgcctt 31658533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31928881 - 31928977
Alignment:
Q  16 cattcttcaacccccgaaacg--ttcggtcctctttaagaattcttttgcttaaaactatagtctaacacccatggtctccgtagtcataccattcc 110  Q
    ||||||||||||||||||| |  ||  |||||||| ||||||||| ||||| | ||||| ||  || |||||| ||||||| ||||| |||||||||    
T  31928881 cattcttcaacccccgaaatgtctttcgtcctcttgaagaattctcttgctcacaactagagcatatcacccaaggtctccatagtcgtaccattcc 31928977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 34255220 - 34255278
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  34255220 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 34255278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 31574663 - 31574726
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| ||| |||||    
T  31574663 actccacctcaagttgagctttctctacctcaactagcaaatgcgtacatccacaatgactttc 31574726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 4733084 - 4733026
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    |||||||||||||||||| |||| ||||||||  |||||||||||||||  ||||||||    
T  4733084 actccacctcaagttgagatttctctacctcaatttccaaatgcgtacacacactatgc 4733026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 42436329 - 42436390
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    |||||||||||| | |||||||| |||||||| ||| ||||||||||||| || ||||||||    
T  42436329 actccacctcaaatcgagctttctctacctcaactttcaaatgcgtacatacagtatgcctt 42436390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 7445662 - 7445762
Alignment:
Q  116 catcaacttgtctcttcctagtcctattagtagaagactccacctcaagttgagctttcactacctcacctt-ccaaatgcgtacatccactatgccttt 214  Q
    ||||||||| ||||  |||||||| | || |||||||||||||||||||  ||| |||| ||||||||  || |||| ||| ||||||||||||| ||||    
T  7445662 catcaacttatctccacctagtcccactaatagaagactccacctcaagccgagttttctctacctcaagttcccaagtgcatacatccactatgtcttt 7445761  T
Q  215 c 215  Q
    |    
T  7445762 c 7445762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 10379748 - 10379839
Alignment:
Q  133 ctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttccctttgtaa 224  Q
    ||||||||| | || ||||||||||||||||| |||| || | ||| |||| ||| |||| | ||||||| |||||||||||  ||||||||    
T  10379748 ctagtcctacttgtggaagactccacctcaagatgagtttcctctatctcaactttcaaacgtgtacatcaactatgccttttactttgtaa 10379839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16545895 - 16545837
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  16545895 actccacctcaagttgagctttcgctacctcaacttccaaatgagtacttccactatgc 16545837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 29721826 - 29721768
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  29721826 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 29721768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 40381571 - 40381513
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||    
T  40381571 actccacctcaagttgagctttctctgcctcaacttccaaatgcgtacttccactatgc 40381513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 13295093 - 13295031
Alignment:
Q  153 ctccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    |||||||||||| ||||||||| |||||||| |||||||||| |||| ||||||||| |||||    
T  13295093 ctccacctcaagctgagctttctctacctcaacttccaaatgagtacttccactatgtctttc 13295031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 16408753 - 16408695
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  16408753 actccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 16408695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 215
Target Start/End: Complemental strand, 32608865 - 32608692
Alignment:
Q  41 gtcctctttaagaattcttttgcttaaaactatagtctaacacccatggtctccgtagtcataccattccagtatcatcaacttgtctcttcctagtcct 140  Q
    |||||||| ||||||||| ||||| | || || ||  ||||||||| |||  || ||||||||| |||   || ||||||||||||||| |||||||||     
T  32608865 gtcctcttgaagaattctcttgctcacaaatagagcataacacccaaggtgcccatagtcatactattttggtgtcatcaacttgtctcctcctagtccc 32608766  T
Q  141 attagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    | || | ||||| || ||||||||  ||| |||| ||| |||| ||||||||||| |||||| |||||| |||||    
T  32608765 actaatggaagattcaacctcaagacgagttttctcta-ctcaacttccaaatgcatacatcgactatgtctttc 32608692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 535188 - 535127
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctt 213  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||   ||||||||||    
T  535188 actccaccttaagttgagctttctctacctcaacttccaaatgcgtacacatactatgcctt 535127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 26174233 - 26174175
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||| | ||||||||    
T  26174233 actccaccttaagttgagctttctctacctcaacttccaaatgagtacttgcactatgc 26174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 42427146 - 42427189
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgc 195  Q
    ||||||||||||||||||||||| || ||||| |||||||||||    
T  42427146 actccacctcaagttgagctttctcttcctcaacttccaaatgc 42427189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 13693995 - 13694067
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttccctttgtaa 224  Q
    |||| |||||||||||||||||| |||||| |  ||| |||||| || |||||||||| ||||| | ||||||    
T  13693995 actctacctcaagttgagctttctctacctaaaattcaaaatgcataaatccactatgactttcaccttgtaa 13694067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 28521650 - 28521739
Alignment:
Q  123 ttgtctcttcctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcct 212  Q
    ||||||| ||||||||| | |||||||| |||||||||||||  ||| |||||| |||||| |||| ||| ||||||||| |||||||||    
T  28521650 ttgtctcctcctagtcccactagtagaatactccacctcaagccgagttttcaccacctcaacttctaaacgcgtacatcaactatgcct 28521739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 16604725 - 16604650
Alignment:
Q  126 tctcttcctagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacat 201  Q
    |||| ||||||||||  |||| ||||||||||||| ||||||||||||| | |||||| |||||||||| ||||||    
T  16604725 tctcatcctagtcctcgtagtggaagactccacctgaagttgagctttctccacctcaacttccaaatgtgtacat 16604650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 28569186 - 28569249
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    ||||||||| ||| ||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  28569186 actccaccttaagctgagctttctctacctcaacttccaaatgcgtacacccactatggctttc 28569249  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 27894245 - 27894184
Alignment:
Q  141 attagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatc 202  Q
    |||||| |||||||||||||||||||||||||||  || ||||  |||||||| ||||||||    
T  27894245 attagtggaagactccacctcaagttgagctttctatatctcaaattccaaatccgtacatc 27894184  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 16676873 - 16676809
Alignment:
Q  134 tagtcctattagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgta 198  Q
    |||||||| |||| |||||||||||||||||||  | |||| | |||||| ||||||||||||||    
T  16676873 tagtcctactagtggaagactccacctcaagttaggatttctccacctcaacttccaaatgcgta 16676809  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 7858536 - 7858628
Alignment:
Q  142 ttagtagaagactccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgcctttccctttgtaaactacacctt 234  Q
    ||||| ||||||| ||||||||| | || |||| | | |||| ||||||||||||||||| ||||| | ||||| | |||| | |||||||||    
T  7858536 ttagtggaagactacacctcaagctaagttttctccatctcaacttccaaatgcgtacattcactacgtctttcaccttgtcatctacacctt 7858628  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 14634714 - 14634762
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtaca 200  Q
    |||||||||||||||||| |||| ||||| || ||||||| ||||||||    
T  14634714 actccacctcaagttgagatttctctaccccaacttccaattgcgtaca 14634762  T

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Target: scaffold1908 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 816 - 758
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||||  ||||||||    
T  816 actccaccttaagttgagctttctctacctcaacttccatatgcgtacacacactatgc 758  T

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Target: scaffold0491 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 9631 - 9689
Alignment:
Q  152 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 210  Q
    ||||||| ||||||||||||||| |||||||| ||| |||||| |||| ||||||||||    
T  9631 actccacatcaagttgagctttctctacctcaactttcaaatgagtacttccactatgc 9689  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 23084 - 23132
Alignment:
Q  167 gagctttcactacctcaccttccaaatgcgtacatccactatgcctttc 215  Q
    |||||||| | |||||| |||||||||||||||||||| |||| |||||    
T  23084 gagctttctccacctcaacttccaaatgcgtacatccattatgtctttc 23132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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