View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10951_low_7 (Length: 394)
Name: NF10951_low_7
Description: NF10951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10951_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 12 - 376
Target Start/End: Complemental strand, 34187767 - 34187403
Alignment:
| Q |
12 |
aggagcacagatatcagagtgaattaactgcaacaactgacatgcacgccaattactttgtcgtggaaaagaatctcgttgatgcttacctttgaggcaa |
111 |
Q |
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|||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187767 |
aggaccacaaatatcagagtgaattaactgcaacaactgagatgcacgccaattactttgtcgtggaaaagaatctcgttgatgcttacctttgaggcaa |
34187668 |
T |
|
| Q |
112 |
tgttcacaaagttgagttggtgacttaatggacggcaacccttttaccatatcatattctagtaaagttttcagtccactatagctcaagtgaccataac |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187667 |
tgttcacaaagttgagttggtgacttaatggacggcaacccttttaccatatcatattctagtaaagttttcagtccactatagctcaagtgaccataac |
34187568 |
T |
|
| Q |
212 |
gagagtgccatacttgagctggtggcacaaaactagcctgaaagcaaggttgagaaactccagattttacgctcatagcaaacatacggttagtagtcat |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187567 |
gagagtgccatacttgagctggtggcacaaaactagcctgaaaacaaggttgagaaactccagattttacgctcatagcaaacatacggttagtagtcat |
34187468 |
T |
|
| Q |
312 |
gtatgtttcgaaaataaggcccttttcattaaacacactacacttgttttgcttcatttcaacat |
376 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187467 |
gtatgtttcgaaaataagacccttttcattaaacacactacacttgttttgcttcatttcaacat |
34187403 |
T |
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