View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10953_low_13 (Length: 275)
Name: NF10953_low_13
Description: NF10953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10953_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 28254931 - 28255157
Alignment:
| Q |
16 |
acatcaagaagttaggnnnnnnncaggggaagacaaagaatattgaagaaaagtgttaaaagtaagaccataattattttttc-ctttgatataaaaaag |
114 |
Q |
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| T |
28254931 |
acatcaagaagttaggaaaaaaacaggggaagacaaagaatattgaagaaaagtgttaaaagcaagaccataattattttttttctttgatataaaaaag |
28255030 |
T |
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| Q |
115 |
caagaccattctgcaagtggttagcctgcagttgcaccaacatacatataatgtgacagtgtaaagagcattgcagttcgacttgttcatttgaaagtta |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28255031 |
caagaccattctgcaagtggttagcctgcagttgcaccaacatacatataatgtgacagtgtaaagagcattgcagttcgacttgttcatttgaaagtta |
28255130 |
T |
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| Q |
215 |
ggtactcatatactcaagtgattttctct |
243 |
Q |
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||||||| |||||||||||||||||||| |
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| T |
28255131 |
ggtactc--atactcaagtgattttctct |
28255157 |
T |
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