View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_130 (Length: 347)
Name: NF10954A_low_130
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_130 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 42 - 341
Target Start/End: Complemental strand, 4306828 - 4306529
Alignment:
| Q |
42 |
cctaaatcaacggaatgaaacaaataatgcaattatgagtaactacatttctgggtatccgagtgcatcatcggtggcttcacgttctcggaatgtatta |
141 |
Q |
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| T |
4306828 |
cctaaatcaacggaatgaaacaaataatgcaattatgagtaactacatttctgggtatccgagtgcatcatcggtggcttcacgttctcggaatgtatta |
4306729 |
T |
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| Q |
142 |
ttcttcttggcatcctcctctgcgaaaacggaggatgaaaaagtgcagagtnnnnnnnnnnnnnnnnnnnnntttgttgatgaaaagggtttcataagaa |
241 |
Q |
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| T |
4306728 |
ttcttcttggcatcctcctctgcgaaaacggaggatgaaaaagtgcagagtagaagaagaaaaagaagaagatttgttgatgaaaagggtttcataagaa |
4306629 |
T |
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| Q |
242 |
caaattagggatttggttacgccaaattgaaggattgaaaattgatttgctggagttgggtaatgatcaattgagcattggattgtgtgaaatcgaaaac |
341 |
Q |
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| T |
4306628 |
caaattagggatttggttacgccaaattgaaggattgaaaattgatttggtggagttgggtaatgatcaattgagcattggattgtgtgaaatcgaaaac |
4306529 |
T |
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