View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_155 (Length: 326)
Name: NF10954A_low_155
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_155 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 44999138 - 44999350
Alignment:
| Q |
9 |
atcatagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatataga |
108 |
Q |
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| T |
44999138 |
atcatagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatataga |
44999237 |
T |
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| Q |
109 |
aggaaggaaaaaataaataaataaagaaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaact |
208 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44999238 |
aggaaggaaaaaataaataaat----aaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaact |
44999333 |
T |
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| Q |
209 |
ccaattcgtgagcccta |
225 |
Q |
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||||||||||||||||| |
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| T |
44999334 |
ccaattcgtgagcccta |
44999350 |
T |
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