View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_196 (Length: 300)
Name: NF10954A_low_196
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_196 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 10 - 293
Target Start/End: Original strand, 28550887 - 28551170
Alignment:
| Q |
10 |
cacatgcaccgtcccaacaaaaaggaaagtgaagtattattgatgtttaaaaatcacaaggttcatgccatattaaacacatttcaataaaactgaatta |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550887 |
cacatgcaccgtcccaacaaaaaggaaagtgaagtattattgatgtttaaaaatcacaaggttcatgccatattaaacacatttcaataaaactgaatta |
28550986 |
T |
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| Q |
110 |
atgtgctagagactctatctcatcttcacgccaattgcgaatttcctctaagatcccagatggttgtcttgttggatcgttcgtagactcattcttgcac |
209 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550987 |
atgtgctagagaatctatctcatcttcacgccaattgcgaatttcctctaagatcccagatggttgtcttgttggatcgttcgtagactcattcttgcac |
28551086 |
T |
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| Q |
210 |
ataagacatgatctcttttcacaggtgataatcttacacgagatattcatacggttcaatagattacgatgactcgagtataat |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28551087 |
ataagacatgatctcttttcacaggtgataatcttacacgagatattcatacggttcaatagattacgatgactcgagtataat |
28551170 |
T |
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