View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_219 (Length: 292)
Name: NF10954A_low_219
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_219 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 6 - 287
Target Start/End: Original strand, 11757937 - 11758218
Alignment:
| Q |
6 |
agaacgaactcgagaagtgaaatttcgagtggtgttgaatgtgttcgtagatttgagaagaggagtgagaatgaagttgaagtttcggagacttcgtgtg |
105 |
Q |
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| T |
11757937 |
agaacgaactcgagaagtgaaatttcgagtggtgttgaatgtgttcgtagatttgagaagaggaatgagaatgaagttgaagtttcggagacttcgtgtg |
11758036 |
T |
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| Q |
106 |
tggattctagttctggagttcgtagaaacttgattttgaagtttgaaaatggaaaggagaacgatgaagtttcagaagtttgtacgaaatcggaacttac |
205 |
Q |
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| T |
11758037 |
tggattctagttctggagttcgtagaaacttgattttgaagtttgaaaatggaaaagagaacgatgaagtttctgaagtttgtacgaaatcggaacttac |
11758136 |
T |
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| Q |
206 |
ttttgctgagaattcaaaatcgagtaacggaaattcgaatttgaatttgaatttgaatatctcgtcggagataacaccaaac |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
11758137 |
ttttgctgagaattcaaaatcgagtaacggaaattcgaatttgaatttgaatttgaatatctcgtcggagataacacgaaac |
11758218 |
T |
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