View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_252 (Length: 281)

Name: NF10954A_low_252
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_252
NF10954A_low_252
[»] chr3 (45 HSPs)
chr3 (1-79)||(48650527-48650605)
chr3 (8-81)||(21533600-21533673)
chr3 (1-78)||(45568239-45568316)
chr3 (1-81)||(6954487-6954567)
chr3 (1-81)||(43017105-43017185)
chr3 (1-81)||(52922908-52922988)
chr3 (1-81)||(9797325-9797405)
chr3 (1-80)||(54149208-54149287)
chr3 (1-81)||(10108453-10108533)
chr3 (1-81)||(36910557-36910637)
chr3 (1-80)||(44959767-44959844)
chr3 (1-81)||(47041839-47041919)
chr3 (1-80)||(9998684-9998763)
chr3 (1-80)||(40487542-40487621)
chr3 (1-80)||(46304313-46304391)
chr3 (1-81)||(10229693-10229773)
chr3 (1-81)||(33580097-33580177)
chr3 (1-81)||(38546016-38546096)
chr3 (1-80)||(40556919-40556998)
chr3 (1-63)||(31271641-31271703)
chr3 (4-78)||(37040988-37041062)
chr3 (1-81)||(628715-628794)
chr3 (1-81)||(10233287-10233367)
chr3 (1-81)||(21313253-21313333)
chr3 (1-81)||(53807650-53807729)
chr3 (7-81)||(20464756-20464835)
chr3 (1-81)||(21431830-21431912)
chr3 (15-77)||(43488386-43488448)
chr3 (1-81)||(4711699-4711779)
chr3 (1-60)||(36461249-36461308)
chr3 (6-80)||(12149575-12149649)
chr3 (5-81)||(47896372-47896448)
chr3 (27-78)||(3085085-3085136)
chr3 (34-81)||(4178818-4178865)
chr3 (34-81)||(25162689-25162736)
chr3 (1-80)||(50194128-50194206)
chr3 (35-81)||(2342702-2342748)
chr3 (1-63)||(7448723-7448785)
chr3 (1-63)||(7456865-7456927)
chr3 (34-80)||(32607722-32607768)
chr3 (27-81)||(55061767-55061821)
chr3 (27-80)||(23799740-23799792)
chr3 (27-60)||(38859943-38859976)
chr3 (36-80)||(29503716-29503760)
chr3 (1-53)||(32701708-32701760)
[»] chr7 (32 HSPs)
chr7 (1-81)||(28044547-28044627)
chr7 (1-80)||(12141099-12141178)
chr7 (1-81)||(37837250-37837329)
chr7 (1-77)||(40993377-40993453)
chr7 (1-80)||(48061642-48061721)
chr7 (1-78)||(45349593-45349670)
chr7 (1-77)||(8001341-8001417)
chr7 (1-81)||(9977001-9977081)
chr7 (1-81)||(34899398-34899478)
chr7 (1-60)||(39171402-39171461)
chr7 (4-78)||(28407712-28407786)
chr7 (1-81)||(42978830-42978906)
chr7 (6-80)||(3222897-3222970)
chr7 (15-81)||(39328585-39328651)
chr7 (27-80)||(3876033-3876086)
chr7 (1-78)||(46700254-46700331)
chr7 (4-61)||(47590534-47590591)
chr7 (1-81)||(41553227-41553306)
chr7 (34-81)||(14627672-14627719)
chr7 (34-81)||(17611647-17611694)
chr7 (34-81)||(26492621-26492668)
chr7 (34-81)||(42066836-42066883)
chr7 (34-80)||(17499455-17499501)
chr7 (34-80)||(17553713-17553759)
chr7 (34-80)||(20083594-20083640)
chr7 (34-80)||(32684924-32684970)
chr7 (34-80)||(34773967-34774013)
chr7 (34-80)||(35261553-35261599)
chr7 (34-80)||(45198808-45198854)
chr7 (39-81)||(48316610-48316652)
chr7 (1-54)||(24770464-24770517)
chr7 (41-81)||(21266655-21266695)
[»] chr6 (27 HSPs)
chr6 (1-81)||(606423-606503)
chr6 (1-81)||(32327011-32327091)
chr6 (1-80)||(12170687-12170766)
chr6 (3-81)||(3913365-3913443)
chr6 (1-81)||(9341442-9341522)
chr6 (1-78)||(21426480-21426557)
chr6 (1-81)||(7514994-7515073)
chr6 (1-81)||(33052959-33053039)
chr6 (1-81)||(67792-67872)
chr6 (1-81)||(14174862-14174942)
chr6 (1-81)||(14179398-14179478)
chr6 (1-81)||(29319668-29319748)
chr6 (1-78)||(30894817-30894894)
chr6 (1-80)||(31297039-31297117)
chr6 (1-63)||(23128837-23128899)
chr6 (1-80)||(28981396-28981474)
chr6 (1-80)||(34185486-34185564)
chr6 (1-63)||(30608324-30608386)
chr6 (8-78)||(34018786-34018856)
chr6 (1-78)||(29255240-29255317)
chr6 (4-81)||(32060098-32060175)
chr6 (34-81)||(8497224-8497271)
chr6 (34-81)||(23947091-23947138)
chr6 (31-81)||(31851672-31851722)
chr6 (27-79)||(679364-679416)
chr6 (34-78)||(7880879-7880923)
chr6 (1-81)||(30493751-30493831)
[»] chr5 (26 HSPs)
chr5 (1-81)||(9113516-9113596)
chr5 (1-81)||(6011929-6012009)
chr5 (1-81)||(13007446-13007526)
chr5 (1-81)||(14726252-14726332)
chr5 (1-81)||(38007574-38007654)
chr5 (1-80)||(24229576-24229655)
chr5 (1-81)||(34945610-34945690)
chr5 (1-80)||(14082188-14082267)
chr5 (1-80)||(35851014-35851093)
chr5 (1-63)||(38598014-38598076)
chr5 (1-78)||(8096293-8096369)
chr5 (1-81)||(13422150-13422229)
chr5 (1-73)||(25980374-25980446)
chr5 (1-81)||(26825647-26825727)
chr5 (1-81)||(10722978-10723058)
chr5 (8-81)||(1409724-1409797)
chr5 (2-78)||(4771075-4771150)
chr5 (8-81)||(8088004-8088076)
chr5 (1-81)||(11073779-11073857)
chr5 (1-81)||(11976726-11976806)
chr5 (34-81)||(21060057-21060104)
chr5 (1-80)||(26877901-26877980)
chr5 (34-81)||(34881975-34882022)
chr5 (34-80)||(781646-781692)
chr5 (34-79)||(18677242-18677287)
chr5 (1-81)||(10332339-10332418)
[»] chr4 (36 HSPs)
chr4 (1-81)||(13634353-13634433)
chr4 (1-80)||(56040438-56040517)
chr4 (1-81)||(19853303-19853383)
chr4 (1-81)||(21686033-21686113)
chr4 (1-80)||(2521017-2521096)
chr4 (1-80)||(26633463-26633542)
chr4 (1-78)||(43510434-43510511)
chr4 (1-81)||(32766752-32766832)
chr4 (1-81)||(4142555-4142635)
chr4 (1-63)||(48257441-48257503)
chr4 (6-81)||(10258692-10258767)
chr4 (7-81)||(47320204-47320277)
chr4 (1-81)||(17949114-17949195)
chr4 (1-81)||(17952966-17953047)
chr4 (7-63)||(24098878-24098934)
chr4 (1-80)||(35348545-35348626)
chr4 (1-81)||(53444356-53444437)
chr4 (27-81)||(6155000-6155054)
chr4 (11-81)||(10496584-10496654)
chr4 (1-63)||(29960758-29960820)
chr4 (27-80)||(22611454-22611507)
chr4 (34-81)||(2115362-2115409)
chr4 (34-81)||(9284179-9284226)
chr4 (34-81)||(9528651-9528698)
chr4 (34-81)||(20569525-20569572)
chr4 (1-80)||(21662675-21662754)
chr4 (1-80)||(21671439-21671518)
chr4 (34-81)||(25274151-25274198)
chr4 (34-73)||(32952540-32952579)
chr4 (34-77)||(46990909-46990952)
chr4 (34-80)||(1931526-1931572)
chr4 (34-80)||(53616425-53616471)
chr4 (27-80)||(40065986-40066039)
chr4 (36-81)||(53811291-53811336)
chr4 (1-81)||(36204171-36204250)
chr4 (27-79)||(43853718-43853770)
[»] chr2 (42 HSPs)
chr2 (1-81)||(18763696-18763776)
chr2 (1-81)||(31788684-31788764)
chr2 (1-81)||(5427661-5427741)
chr2 (1-81)||(36942914-36942994)
chr2 (1-80)||(31193129-31193208)
chr2 (1-81)||(1415785-1415865)
chr2 (1-81)||(4041386-4041466)
chr2 (1-81)||(4778981-4779061)
chr2 (1-80)||(36692102-36692181)
chr2 (1-79)||(35220556-35220634)
chr2 (1-81)||(33923933-33924013)
chr2 (1-80)||(38445394-38445473)
chr2 (8-78)||(11985028-11985098)
chr2 (1-78)||(12677246-12677323)
chr2 (1-81)||(7646706-7646786)
chr2 (1-81)||(33585527-33585607)
chr2 (1-81)||(37876398-37876478)
chr2 (6-77)||(1421908-1421979)
chr2 (1-78)||(29173512-29173589)
chr2 (1-80)||(4903938-4904017)
chr2 (1-81)||(7677665-7677745)
chr2 (1-81)||(10929893-10929972)
chr2 (27-81)||(12553961-12554015)
chr2 (8-78)||(17248943-17249012)
chr2 (34-80)||(30923250-30923296)
chr2 (1-78)||(4100563-4100635)
chr2 (27-80)||(14416420-14416473)
chr2 (1-78)||(30399824-30399901)
chr2 (32-81)||(32448409-32448458)
chr2 (8-80)||(25508861-25508933)
chr2 (34-81)||(4193097-4193144)
chr2 (34-81)||(9374337-9374384)
chr2 (34-81)||(25087295-25087342)
chr2 (34-81)||(31580429-31580476)
chr2 (34-81)||(36234258-36234305)
chr2 (34-80)||(4228383-4228429)
chr2 (4-74)||(9169056-9169126)
chr2 (34-80)||(21570183-21570229)
chr2 (35-81)||(32913489-32913535)
chr2 (1-42)||(27097238-27097279)
chr2 (32-81)||(37994542-37994591)
chr2 (34-78)||(38575263-38575307)
[»] chr8 (32 HSPs)
chr8 (1-81)||(7883030-7883110)
chr8 (1-81)||(30568110-30568190)
chr8 (1-80)||(16928547-16928626)
chr8 (1-78)||(33214463-33214540)
chr8 (1-79)||(40211091-40211171)
chr8 (8-81)||(40618862-40618935)
chr8 (1-81)||(1236487-1236566)
chr8 (1-81)||(23230863-23230943)
chr8 (1-81)||(31013397-31013477)
chr8 (1-80)||(9637199-9637278)
chr8 (1-79)||(45445602-45445680)
chr8 (1-81)||(8412311-8412391)
chr8 (1-81)||(17693402-17693482)
chr8 (1-81)||(27498155-27498235)
chr8 (10-81)||(28086601-28086672)
chr8 (1-63)||(41684593-41684655)
chr8 (1-81)||(24099046-24099125)
chr8 (1-63)||(7198003-7198064)
chr8 (1-63)||(25190872-25190934)
chr8 (1-81)||(3673661-3673741)
chr8 (1-81)||(21238008-21238087)
chr8 (17-81)||(37971523-37971587)
chr8 (34-81)||(14906697-14906744)
chr8 (39-81)||(10377932-10377974)
chr8 (30-80)||(19443843-19443893)
chr8 (36-81)||(3240636-3240681)
chr8 (1-81)||(15344528-15344609)
chr8 (1-81)||(15433593-15433674)
chr8 (1-81)||(15524897-15524978)
chr8 (35-71)||(13977814-13977850)
chr8 (1-80)||(16247014-16247094)
chr8 (8-68)||(24186463-24186523)
[»] chr1 (42 HSPs)
chr1 (1-80)||(4413335-4413414)
chr1 (1-80)||(11462274-11462353)
chr1 (1-81)||(49504386-49504466)
chr1 (1-81)||(44915860-44915940)
chr1 (1-80)||(10776253-10776332)
chr1 (1-80)||(21687599-21687678)
chr1 (1-78)||(24583171-24583247)
chr1 (8-81)||(26535564-26535637)
chr1 (1-81)||(7337454-7337534)
chr1 (1-81)||(29738456-29738535)
chr1 (1-81)||(32395218-32395298)
chr1 (1-81)||(34878069-34878149)
chr1 (16-80)||(36894200-36894264)
chr1 (1-80)||(19596252-19596331)
chr1 (5-72)||(35484191-35484258)
chr1 (179-232)||(21695315-21695368)
chr1 (4-77)||(21947413-21947486)
chr1 (1-78)||(24583367-24583443)
chr1 (1-78)||(51373652-51373729)
chr1 (1-81)||(8211098-8211178)
chr1 (1-81)||(45415779-45415859)
chr1 (1-80)||(14872860-14872939)
chr1 (34-81)||(41081478-41081525)
chr1 (1-78)||(940459-940536)
chr1 (8-77)||(16989599-16989668)
chr1 (1-81)||(44543493-44543571)
chr1 (1-81)||(50377544-50377624)
chr1 (2-77)||(23289187-23289262)
chr1 (6-81)||(47133129-47133203)
chr1 (1-63)||(1742508-1742570)
chr1 (1-81)||(15431458-15431537)
chr1 (1-81)||(39888403-39888483)
chr1 (1-77)||(49627134-49627208)
chr1 (30-81)||(5984066-5984117)
chr1 (34-81)||(14545735-14545782)
chr1 (34-81)||(27456743-27456790)
chr1 (34-81)||(30879335-30879382)
chr1 (34-81)||(48217697-48217744)
chr1 (34-80)||(35584398-35584444)
chr1 (36-81)||(20266564-20266609)
chr1 (1-77)||(13144608-13144683)
chr1 (36-80)||(44637679-44637723)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-80)||(1765-1844)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-80)||(9834-9913)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-81)||(71661-71741)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-81)||(15710-15790)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-52)||(1562-1613)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-80)||(31066-31145)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-55)||(32564-32618)
[»] scaffold0634 (1 HSPs)
scaffold0634 (6-80)||(8736-8810)
[»] scaffold0014 (1 HSPs)
scaffold0014 (34-80)||(201148-201194)
[»] scaffold0603 (1 HSPs)
scaffold0603 (27-81)||(7971-8025)
[»] scaffold0049 (1 HSPs)
scaffold0049 (6-80)||(71092-71166)


Alignment Details
Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48650605 - 48650527
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  48650605 ttcaccctttacatttttagcgatatttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttg 48650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 21533673 - 21533600
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21533673 tttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtc 21533600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45568316 - 45568239
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  45568316 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttttt 45568239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6954567 - 6954487
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||    
T  6954567 ttcaccctttacgtttttagcgatgtttgtatctgaagtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 6954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43017105 - 43017185
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  43017105 ttcatcctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 43017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52922988 - 52922908
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  52922988 ttcaccctttacgtttttagcgatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 52922908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9797405 - 9797325
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||| ||||||||  |||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||    
T  9797405 ttcaccctttacgttcttagcgatgtttgtatctgatgtactatatcgatttgaatgaatgaatatcgttttgtttttgtc 9797325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 54149208 - 54149287
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||  |||||||    
T  54149208 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttaatttttgt 54149287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10108453 - 10108533
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  10108453 ttcaccctttacgtttttagctatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttatttttgtc 10108533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36910637 - 36910557
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||| |||||  || |||||||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  36910637 ttcaccctttacgttttttgcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttttatttttgtc 36910557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44959844 - 44959767
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||  || |||||||||||||    
T  44959844 ttcaccctttacgtttttagcgatgtttgtatctgatgtattctatcgatttgaatgaatga--ataattttgtttttgt 44959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47041919 - 47041839
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||| ||  |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  47041919 ttcaccttttacgtttttagcaatgtttgtatctgatgtaatctatctatttgaatgaatgaatatcattttgtttttgtc 47041839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9998684 - 9998763
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||||||||||| ||||||| ||| |||| |||||||    
T  9998684 ttcaccctttacgtttttagctatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttatttttgt 9998763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40487542 - 40487621
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||| ||||| ||||||||||||  ||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||    
T  40487542 ttcactctttatgtttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttttgt 40487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46304391 - 46304313
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  46304391 ttcaccctttacgtttttagc-atgtttgtatctgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 46304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10229693 - 10229773
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  |||||| |||| ||||||||||||||||| ||||||| ||| |||| ||||||||    
T  10229693 ttcaccctttacgtttttagctatgtttgtatttgatatactctatcgatttgaatgaatgaatatcgttttatttttgtc 10229773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33580097 - 33580177
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||| |||  |||||| ||||||| |||||||||||||| ||||||| ||| | |||||||||||    
T  33580097 ttcaccctttacgtttttagtgatgtttgtatttgatgtaatctatcgatttgaatgaatgaatatcgtcttgtttttgtc 33580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38546016 - 38546096
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||| |||  |||||||||| ||| |||||||||||||| |||| || ||| |||||||||||||    
T  38546016 ttcaccctttacgtttttagtgatgtttgtatctgaggtaatctatcgatttgaatgaataaatatcgttttgtttttgtc 38546096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40556919 - 40556998
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||| ||||||||||||  |||||| ||||||||| | |||||||||| ||||||| ||| ||||||||||||    
T  40556919 ttcaccctttatgtttttagcgatgtttgtatttgatgtactatgtcgatttgaatgaatgaatatcgttttgtttttgt 40556998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31271703 - 31271641
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||| || |||||||    
T  31271703 ttcaccctttacgtttttagcgatatttgtatctgatgttctctatcaatttaaatgaatgaa 31271641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 37040988 - 37041062
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||| |||||||  ||||||||||||||||||||| || |||| ||||||| ||| ||||||||||    
T  37040988 accctttacgtttctagcgatttttgtatctgatgtactctatcaatctgaatgaatgaatatcgttttgttttt 37041062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 628794 - 628715
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||||||||||||||| ||||  | ||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  628794 ttcatcctttacgtttttagcgat-cttgattttgatgtattctatcaatttgaatgaatgaatatcattttgtttttgtc 628715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10233287 - 10233367
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| ||||||| | ||  |||||| |||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  10233287 ttcaccctttatgtttttatctatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttatttttgtc 10233367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21313253 - 21313333
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||| ||||||||| |  ||||||||||| ||||| ||| ||||||| ||||||| ||| |||||||||||||    
T  21313253 ttcaccctttacatttttagcggtgtttgtatctgatatactcaatcaatttgaatgaatgaatatcgttttgtttttgtc 21313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 53807729 - 53807650
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||||||||||||||| ||||  ||||||||| ||||| ||||| || ||||||| |||||||||||||||||    
T  53807729 ttcatcctttacgtttttagcgat-cttgattctgatgtattctattgattttaatgaatgaatatcattttgtttttgtc 53807650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 20464835 - 20464756
Alignment:
Q  7 ctttacgtttttagcgatacttgtatc-----tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||  |||||||     |||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  20464835 ctttacgtttttagcgatgtttgtatctgatctgatgtactctatcaatttgaatgaatgaatatcattttgtttttgtc 20464756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21431830 - 21431912
Alignment:
Q  1 ttcaccctttacgtttttagcgatac--ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||    ||||||||||||||||||||||||||||| |||||||  || |||| ||||||||    
T  21431830 ttcaccatttacgtttttagcgatgtgtttgtatctgatgtactctatcgatttgaatgaatgaatgtcgttttatttttgtc 21431912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 43488448 - 43488386
Alignment:
Q  15 ttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||||| ||| |||||||||    
T  43488448 ttttagcgatgtttgtatctaatgtactctatcgatttgaatgaatgaatatcgttttgtttt 43488386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4711699 - 4711779
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||| |||||||| |||  |||||||||||||||||||||||||||   ||||||| ||| |||| ||||||||    
T  4711699 ttcatcctttatgtttttagtgatgtttgtatctgatgtactctatcgatttggttgaatgaatatcgttttatttttgtc 4711779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36461308 - 36461249
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaat 60  Q
    |||||||||||| |||||||||||  |||||||| |||||||||||| ||||||| ||||    
T  36461308 ttcaccctttacatttttagcgatgtttgtatctaatgtactctatcaatttgaatgaat 36461249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 12149649 - 12149575
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||| || |||||||| |||||| | |||||||||||| ||| ||| ||| |||| |||||||    
T  12149649 cctttacgtttttagctatgcttgtatcagatgtattttatcgatttgaatgaaggaatatcgttttatttttgt 12149575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 47896372 - 47896448
Alignment:
Q  5 ccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| |||||||| |||  |||||| | |||||||||||| |||||||  |||||| ||| |||||||||||||    
T  47896372 ccctttaagtttttagggatgtttgtatttaatgtactctatcaatttgaatcaatgaatatcgttttgtttttgtc 47896448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 3085136 - 3085085
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||| ||| |||||| ||||||| ||||||| ||||||||||||||    
T  3085136 ttgtatctgaagtattctatcaatttgaatgaatgaatatcattttgttttt 3085085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 4178818 - 4178865
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  4178818 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 4178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 25162689 - 25162736
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  25162689 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50194206 - 50194128
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||||||||||  |||  ||||||||| | |||| ||||||| ||||||| ||||||||| ||||||    
T  50194206 ttcatcctttacgtttttagcgat-gttgattctgatgtattatatcaatttgaatgaatgaatatcattttgcttttgt 50194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 2342702 - 2342748
Alignment:
Q  35 gatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  2342702 gatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 2342748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7448785 - 7448723
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||| |||||||||||| ||||  || |||||| ||||||||||| ||||||| |||||||    
T  7448785 ttcaccatttacgtttttatcgatgtttatatctgttgtactctatcaatttgaatgaatgaa 7448723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7456927 - 7456865
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||| |||||||||||| ||||  || |||||| ||||||||||| ||||||| |||||||    
T  7456927 ttcaccatttacgtttttatcgatgtttatatctgttgtactctatcaatttgaatgaatgaa 7456865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 32607722 - 32607768
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  32607722 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 32607768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 55061767 - 55061821
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||| ||||||   ||||||||||||| ||| |||||||||||||    
T  55061767 ttgtatctgatgtattctatcaggttgaacgaatgaatatcgttttgtttttgtc 55061821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 23799792 - 23799740
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||| |||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  23799792 ttgtatct-atgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 23799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 38859976 - 38859943
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaat 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  38859976 ttgtatctgatgtactctatcgatttgaatgaat 38859943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 29503716 - 29503760
Alignment:
Q  36 atgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||| ||||| |||||||| ||||||| ||||||||||||||||    
T  29503716 atgtaatctattgatttgaatgaatgaatatcattttgtttttgt 29503760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32701708 - 32701760
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttg 53  Q
    |||||| ||||  |||||||||||  |||||||||||||| ||||||||||||    
T  32701708 ttcaccttttatatttttagcgatgtttgtatctgatgtattctatcgatttg 32701760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28044627 - 28044547
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  28044627 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 28044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12141178 - 12141099
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  12141178 ttcaccttttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 12141099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37837329 - 37837250
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||    
T  37837329 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatc-gtttgtttttgtc 37837250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40993377 - 40993453
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||| ||| |||||||||    
T  40993377 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttaaatgaatgaatatcgttttgtttt 40993453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48061642 - 48061721
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||| |||  ||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  48061642 ttcaccctttacgtttttagagatgtttgtacctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 48061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45349670 - 45349593
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||| ||| |||| |||||    
T  45349670 ttcaccctttacgtttttagcgatatttgtatctgatgtactctatcgatttaaattaatgaatatcgtttttttttt 45349593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8001417 - 8001341
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||| ||| |||| ||||    
T  8001417 ttcaccctttacgtttttagcgatgtttgtatctgatgcactctatcgatttgaatgaatgaatatcgttttatttt 8001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9977081 - 9977001
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||| |||| || ||||||| ||| |||||||||||||    
T  9977081 ttcaccctttacgtttttagcaatgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgtttttgtc 9977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34899478 - 34899398
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| ||||||| |||| || |||||||| ||||||||    
T  34899478 ttcaccctttacgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaataaatatcattttatttttgtc 34899398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39171461 - 39171402
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaat 60  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  39171461 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaat 39171402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 28407786 - 28407712
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||| ||||||||||||  |||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  28407786 accctttatgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgttttt 28407712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42978830 - 42978906
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||| ||||||| ||||    ||| |||||||||||||    
T  42978830 ttcaccctttacgtttttagcgatgtttgtatctgatggactctatcaatttgaatgaat----atcgttttgtttttgtc 42978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 3222970 - 3222897
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||| || | ||||||||| | |||| |||| || ||||||| ||||||||||||||||    
T  3222970 cctttacgtttttagcgatatttat-tctgatgtattatatcaatttaaatgaatgaatatcattttgtttttgt 3222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 39328651 - 39328585
Alignment:
Q  15 ttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||  |||||| ||||||| || ||||||||||| ||||||| ||| |||||||||||||    
T  39328651 ttttagcgatgtttgtatttgatgtaatccatcgatttgaatgaatgaatatcgttttgtttttgtc 39328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 3876086 - 3876033
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| ||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  3876086 ttgtatttgatgtattctatcaatttgaacgaaagaatatcattttgtttttgt 3876033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46700254 - 46700331
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||||||||| ||| ||| ||||||| ||| ||| ||||||    
T  46700254 ttcaccctttatgtttttaacgatttttgtacctgatgtactctatcaattagaatgaatgaatatcgtttggttttt 46700331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 47590534 - 47590591
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatg 61  Q
    |||||||||||||| ||||||  || |||||||| ||||||||||||||||| |||||    
T  47590534 accctttacgttttcagcgatgtttatatctgatatactctatcgatttgaatgaatg 47590591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41553306 - 41553227
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||| |||  |||  ||||||||| |||||  ||||||| ||||||| ||| |||||||||||||    
T  41553306 ttcaccctttacgtttttagtgatg-ttgattctgatgtattctattaatttgaatgaatgaatatcgttttgtttttgtc 41553227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 14627719 - 14627672
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  14627719 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 14627672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 17611647 - 17611694
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  17611647 tgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 17611694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 26492621 - 26492668
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  26492621 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 26492668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 42066883 - 42066836
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  42066883 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 42066836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 17499501 - 17499455
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||| |||||||||||||||| |||||||| |||||||    
T  17499501 tgatgttctctattgatttgaacgaatgaatatcattttatttttgt 17499455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 17553713 - 17553759
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||| |||||||||||||||| |||||||| |||||||    
T  17553713 tgatgttctctattgatttgaacgaatgaatatcattttatttttgt 17553759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 20083594 - 20083640
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||| |||||||||||| |||| || ||||||||||||||||    
T  20083594 tgatgtactatatcgatttgaatgaataaatatcattttgtttttgt 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 32684924 - 32684970
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  32684924 tgatgtagtctctcgatttgaatgaatgaatatcattttgtttttgt 32684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 34773967 - 34774013
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  34773967 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 34774013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 35261553 - 35261599
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||||    
T  35261553 tgatgtactctatcaatttgaatgaatgaatatcattctgtttttgt 35261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 45198854 - 45198808
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  45198854 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 45198808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 48316652 - 48316610
Alignment:
Q  39 tactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||    
T  48316652 tactctatcgatttgaatgaatgaatatcgttttgtttttgtc 48316610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24770464 - 24770517
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttga 54  Q
    ||||||||||||||| ||||||||  |||||||||||||| | ||| |||||||    
T  24770464 ttcaccctttacgttgttagcgatgtttgtatctgatgtaatttattgatttga 24770517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 21266655 - 21266695
Alignment:
Q  41 ctctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  21266655 ctctctcgatttgaatgaatgaatatcattttgtttttgtc 21266695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 606423 - 606503
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  606423 ttcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtc 606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32327091 - 32327011
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  32327091 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 32327011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12170687 - 12170766
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  12170687 ttcaccctttacatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 12170766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 3913443 - 3913365
Alignment:
Q  3 caccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  3913443 caccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttatttttgtc 3913365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9341522 - 9341442
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  9341522 ttcaccctttacgtttttagcaatgtttgtatctgatgtactctatcgatttgaatgaatgagtatcgttttgtttttgtc 9341442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21426557 - 21426480
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| | ||||||||    
T  21426557 ttcaccgtttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtgttgttttt 21426480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7515073 - 7514994
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||||||||||| ||||||| ||| |||||||||||||    
T  7515073 ttcaccctttacgtttttagcgatt-ttatatctgatgcactctatcgatttgaatgaatgaatatcgttttgtttttgtc 7514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33053039 - 33052959
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  33053039 ttcaccctttacgtttttagcaatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 33052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 67872 - 67792
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||| ||||||| | | |||| ||||||||    
T  67872 ttcaccctttacgtttttagcaatgtttgtatctgatatactctatcgatttgaatgaatgaataccgttttatttttgtc 67792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14174942 - 14174862
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||| ||  |||||||||||||| | |||||||||||| ||||||| ||| |||||||||||||    
T  14174942 ttcaccttttacgtttttagcaatgtttgtatctgatgtaatatatcgatttgaatgaatgaatatcgttttgtttttgtc 14174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14179478 - 14179398
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||| ||  |||||||||||||| | |||||||||||| ||||||| ||| |||||||||||||    
T  14179478 ttcaccttttacgtttttagcaatgtttgtatctgatgtaatatatcgatttgaatgaatgaatatcgttttgtttttgtc 14179398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29319748 - 29319668
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  ||||||||||| |||| |||  ||||||| ||||||| |||||||||||||||||    
T  29319748 ttcaccttttacgtttttagcgatgtttgtatctgatatactttattaatttgaatgaatgaatatcattttgtttttgtc 29319668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30894817 - 30894894
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| |||||||||||||||||||  |||||||||||||| || ||||||||||| ||||||| ||| |||| |||||    
T  30894817 ttcatcctttacgtttttagcgatgtttgtatctgatgtattccatcgatttgaatgaatgaatatcgttttattttt 30894894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31297039 - 31297117
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  |||  ||||||||| |||||| ||||||| ||||||| ||| ||||||||||||    
T  31297039 ttcaccctttacgtttttagcgatg-ttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgt 31297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23128837 - 23128899
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||||||||| |||||||||||  |||||||||||||||||| || ||||||| |||||||    
T  23128837 ttcaccctttacatttttagcgatgtttgtatctgatgtactctgtctatttgaatgaatgaa 23128899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28981396 - 28981474
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  |||  ||||||||| |||||| ||||||||| ||||| ||| |||| |||||||    
T  28981396 ttcaccctttacgtttttagcgat-gttgattctgatgtattctatcaatttgaacgtatgaatatcgttttatttttgt 28981474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34185564 - 34185486
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| ||||| |||||||||||  ||| ||||||| ||||||||| ||||||| ||||||| |||||||| |||||||    
T  34185564 ttcaccttttacttttttagcgat-gttgaatctgatatactctatcaatttgaatgaatgaatatcattttatttttgt 34185486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30608386 - 30608324
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||| |||||||||||||| ||||  ||||||||||| ||||||||| ||||||| |||||||    
T  30608386 ttcatcctttacgtttttaacgatgtttgtatctgatttactctatcaatttgaatgaatgaa 30608324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 34018786 - 34018856
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||||||||||  |||||||| || ||||||||| |||| || ||||||| ||| ||||||||||    
T  34018786 tttacgtttttagcgatgtttgtatctaatatactctatcaatttaaatgaatgaatatcgttttgttttt 34018856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29255317 - 29255240
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||| ||||||||||||||||  |||||| |||||||||| ||| ||||||  ||||||| |||  |||||||||    
T  29255317 ttcacccattacgtttttagcgatgtttgtatttgatgtactccatcaatttgactgaatgaatatcgctttgttttt 29255240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 32060098 - 32060175
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||| ||||||||||   |||||||||||||| | |||| ||||||| ||||||| ||| |||| ||||||||    
T  32060098 accctttacatttttagcgaagtttgtatctgatgtaatatatcaatttgaatgaatgaatatcgttttatttttgtc 32060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 8497224 - 8497271
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  8497224 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 8497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 23947138 - 23947091
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  23947138 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 23947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 31851722 - 31851672
Alignment:
Q  31 atctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||| |||||| ||||||| ||||||| || ||||||||||||||    
T  31851722 atctgatgtattctatcaatttgaatgaatgaatattattttgtttttgtc 31851672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 679364 - 679416
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    |||||||||||||| |||||| ||||||| |||| || | |||||||||||||    
T  679364 ttgtatctgatgtattctatcaatttgaatgaataaataacattttgtttttg 679416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 7880923 - 7880879
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||    
T  7880923 tgatgtaatctctcgatttgaatgaatgaatatcattttgttttt 7880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30493751 - 30493831
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  | |  |||||| || |||||| ||||||| ||||||| | | |||| ||||||||    
T  30493751 ttcaccctttacgtttttagcgatgttagattctgatatattctatctatttgaatgaatgaataacgttttatttttgtc 30493831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9113596 - 9113516
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  9113596 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 9113516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6012009 - 6011929
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  6012009 ttcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 6011929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13007446 - 13007526
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  13007446 ttcaccctttacgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 13007526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14726332 - 14726252
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  14726332 ttcaccctttacgtttttagtgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtc 14726252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38007574 - 38007654
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  |||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  38007574 ttcaccttttacgtttttagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtc 38007654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24229655 - 24229576
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||| ||||||||||||||||||  || |||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  24229655 ttcactctttacgtttttagcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 24229576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34945610 - 34945690
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||| ||| ||| |||| ||||||||    
T  34945610 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgattttaatgaaagaatatcgttttatttttgtc 34945690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14082267 - 14082188
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||| ||||| | ||| ||||||||||||    
T  14082267 ttcaccctttatgtttttagcgatgtttgtatctgatgtgctctatcgatttgaatgaatggatatcgttttgtttttgt 14082188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35851014 - 35851093
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||||||||||||||  ||||||||||| || ||||| |||||||| ||||||| ||||||||||||||||    
T  35851014 ttcaccttttacgtttttagcgatgtttgtatctgatataatctattgatttgaatgaatgaatatcattttgtttttgt 35851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38598014 - 38598076
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||    
T  38598014 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcaatttgaatgaatgaa 38598076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8096369 - 8096293
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||||| |||||||||||  |||||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  8096369 ttcaccctttacatttttagcgatgtttgtatct-atgtactctatcgatttgaatgaatgaatatcgttttgttttt 8096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13422150 - 13422229
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||  |||||| ||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  13422150 ttcatcctttacgtttttagcgatgtttgtatatgatgta-tctatcaatttgaatgaatgaatatcattttgtttttgtc 13422229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25980374 - 25980446
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttg 73  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||| ||||||| ||| |||||    
T  25980374 ttcaccctttacgtttttagcgatgtttgcatctgatatactctatcgatttgaatgaatgaatatcgttttg 25980446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26825647 - 26825727
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  |||||| |||| ||||||||||||||||| ||||||| ||| |||| ||||||||    
T  26825647 ttcaccctttacgtttttagctatgtttgtatttgatatactctatcgatttgaatgaatgaatatcgttttatttttgtc 26825727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10722978 - 10723058
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| ||||| |||||||||||| |||||| |||||||||| ||| ||||||| |||| || ||| |||||||||||||    
T  10722978 ttcaccatttacatttttagcgatatttgtatttgatgtactcgatcaatttgaatgaataaatatcgttttgtttttgtc 10723058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 1409724 - 1409797
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||||||||  ||||||||||||||||||| | |||||||  |||||| ||| |||||||||||||    
T  1409724 tttatgtttttagcgatgtttgtatctgatgtactctaccaatttgaataaatgaatatcgttttgtttttgtc 1409797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 4771075 - 4771150
Alignment:
Q  2 tcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||||||| |||| |||| |||||||| || ||||||||| ||||||| ||||||| ||| ||||||||||    
T  4771075 tcaccctttacgttcttagtgatatttgtatct-atatactctatcaatttgaatgaatgaatatcgttttgttttt 4771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 8088076 - 8088004
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| |||||||| || |||| |||||||| | |||||| ||||||| ||||||| |||||||||||||||||    
T  8088076 tttacctttttagcaat-cttgaatctgatgcattctatcaatttgaatgaatgaatatcattttgtttttgtc 8088004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11073857 - 11073779
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| ||||| |||| ||||||  |||||| |||||||||||||  ||||||| ||||||| |||||||| ||||||||    
T  11073857 ttcaccatttacattttgagcgatgtttgtatatgatgtactctat--atttgaatgaatgaatatcattttatttttgtc 11073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11976806 - 11976726
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||| |||||||||||  ||| |||||||||| |||||| |||| || |||| || |||||||| ||||||||    
T  11976806 ttcatcctttacatttttagcgatgtttgcatctgatgtaatctatcaattttaatgaattaatatcattttatttttgtc 11976726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21060104 - 21060057
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  21060104 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 21060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26877980 - 26877901
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||||| | ||  |||||| |||||||||||||| ||| ||| ||||||| ||| ||||| ||||||    
T  26877980 ttcatcctttacgtttttaccaatgtttgtatatgatgtactctatcaattcgaatgaatgaatatcgttttgattttgt 26877901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 34881975 - 34882022
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  34881975 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 34882022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 781646 - 781692
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  781646 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 781692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 18677287 - 18677242
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||    
T  18677287 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttg 18677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10332418 - 10332339
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||  |||  ||||||||| |||||| ||||||| ||||| | ||  |||||||||||||    
T  10332418 ttcatcctttacgtttttagcgatg-ttgattctgatgtattctatcaatttgaatgaatggatattgttttgtttttgtc 10332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13634353 - 13634433
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13634353 ttcaccctttacgcttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtc 13634433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 56040517 - 56040438
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  56040517 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19853383 - 19853303
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  19853383 ttcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 19853303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21686113 - 21686033
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  21686113 ttcaccctttacgtttgtagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 21686033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2521017 - 2521096
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||    
T  2521017 ttcaccctttacgtttttagcgatgtttgtatctgatggactctatcgatttgaatgaatgaatatcgttttgtttttgt 2521096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26633542 - 26633463
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  26633542 ttcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43510434 - 43510511
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||| ||| ||||||||||    
T  43510434 ttcaccctttacgtttttagcgatatttgtatttgatgtactttatcgatttgaatgaatgaatatcgttttgttttt 43510511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32766752 - 32766832
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||  |||||||||||||    
T  32766752 ttcaccctttgcgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatattgttttgtttttgtc 32766832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4142635 - 4142555
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||| |||||||| ||  |||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  4142635 ttcaccctttacatttttagcaatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 4142555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48257503 - 48257441
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||    
T  48257503 ttcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaa 48257441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 10258767 - 10258692
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||| ||  ||||||||||||||||||||| ||||||| |||||||  ||| ||||||||||||    
T  10258767 cctttacgtttttagcaatgtttgtatctgatgtactctatcaatttgaatgaatgaatctcactttgtttttgtc 10258692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 47320277 - 47320204
Alignment:
Q  7 ctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||| ||||  ||||||||| |||||||||||||| ||||||| || ||||||||||||||    
T  47320277 ctttacgtttttagcgat-cttgattctgatgtattctatcgatttgaatgaatgaatataattttgtttttgtc 47320204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17949195 - 17949114
Alignment:
Q  1 ttcaccctttacgttttt-agcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||| ||||| ||||||  ||||||||||| ||||||||||||||||| ||||||| ||| |||||||| ||||    
T  17949195 ttcaccctttacattttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttctgtc 17949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17953047 - 17952966
Alignment:
Q  1 ttcaccctttacgttttt-agcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||| ||||| ||||||  ||||||||||| ||||||||||||||||| ||||||| ||| |||||||| ||||    
T  17953047 ttcaccctttacattttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttctgtc 17952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 24098934 - 24098878
Alignment:
Q  7 ctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||    
T  24098934 ctttacgtttttagcaatgtttgtatctgatgtactctatcgatttgaatgaatgaa 24098878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35348545 - 35348626
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactc--tatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||||||||   ||||||| ||| ||||||| ||||    
T  35348545 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctttatcgatttggttgaatgaatatcgttttgttattgt 35348626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 53444356 - 53444437
Alignment:
Q  1 ttcaccctttacgtttttagcgatactt-gtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  || |||||| ||||| |||||| ||||||| ||||||| || ||||||||||||||    
T  53444356 ttcaccttttacgtttttagcgatgttttgtatctaatgtaatctatctatttgaatgaatgaatattattttgtttttgtc 53444437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 6155054 - 6155000
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||| ||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  6155054 ttgtatctaatgtattctatcaatttgaatgaatgaatatcattttgtttttgtc 6155000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 10496584 - 10496654
Alignment:
Q  11 acgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||| |||||| |||| ||||||||| ||||||| ||||||| ||| ||||  |||||||    
T  10496584 acgtttttagcgatatttgtatttgatatactctatcaatttgaatgaatgaatatcgttttaattttgtc 10496654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29960820 - 29960758
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||| |||| ||||||||||||| |||||||| || ||||| ||||||||||| |||||||    
T  29960820 ttcaccttttatgtttttagcgatatttgtatctaatatactccatcgatttgaatgaatgaa 29960758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 22611454 - 22611507
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||||||||| || |||| || ||| ||||||||||||    
T  22611454 ttgtatctgatgtactctatcgatttaaatgaataaatatcgttttgtttttgt 22611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 2115409 - 2115362
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  2115409 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 2115362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9284179 - 9284226
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  9284179 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 9284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 9528698 - 9528651
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  9528698 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 9528651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 20569525 - 20569572
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  20569525 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 20569572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21662675 - 21662754
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||| ||||||||||||  |||||| ||||||||||||||  |||||| |||| || ||| ||||| ||||||    
T  21662675 ttcaccatttatgtttttagcgatgtttgtatttgatgtactctatcactttgaatgaataaatatcgttttgattttgt 21662754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21671439 - 21671518
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||| ||||||||||||  |||||| ||||||||||||||  |||||| |||| || ||| ||||| ||||||    
T  21671439 ttcaccatttatgtttttagcgatgtttgtatttgatgtactctatcactttgaatgaataaatatcgttttgattttgt 21671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 25274151 - 25274198
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  25274151 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25274198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 32952579 - 32952540
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttg 73  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  32952579 tgatgtactctatcgatttgaatgaatgaatatcattttg 32952540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 46990952 - 46990909
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||    
T  46990952 tgatgtactctatcgatttgaatgaatgaatatcattttttttt 46990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 1931572 - 1931526
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||| |||||||||||||||| |||||||| |||||||    
T  1931572 tgatgttctctattgatttgaacgaatgaatatcattttatttttgt 1931526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 53616471 - 53616425
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  53616471 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 53616425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 40066039 - 40065986
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||| | ||||||||||||||| ||||||| ||  ||||||||||||    
T  40066039 ttgtatctgatcttctctatcgatttgaatgaatgaatattgttttgtttttgt 40065986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 53811291 - 53811336
Alignment:
Q  36 atgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||| || ||||||| ||| |||||||||||||    
T  53811291 atgtactctatcgatttaaatgaatgaatatcgttttgtttttgtc 53811336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36204250 - 36204171
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| ||||||||||||  |||  ||||||||| ||| || ||||||| ||| ||| ||| |||||||||||||    
T  36204250 ttcaccctttatgtttttagcgatg-ttgattctgatgtattctgtcaatttgaatgaaagaatatcgttttgtttttgtc 36204171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 43853718 - 43853770
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    |||||||||||||| |||||| ||||||| ||||||| ||| |||| ||||||    
T  43853718 ttgtatctgatgtattctatcaatttgaatgaatgaatatcgttttatttttg 43853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18763696 - 18763776
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  18763696 ttcaccctttacgtttttagcgatatttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtc 18763776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31788684 - 31788764
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  31788684 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 31788764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5427741 - 5427661
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  5427741 ttcaccctttacgcttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 5427661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36942994 - 36942914
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  36942994 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtc 36942914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31193208 - 31193129
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  31193208 ttcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 31193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1415785 - 1415865
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| || ||||||||||||||  |||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  1415785 ttcacctttaacgtttttagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcattttgtttttgtc 1415865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4041466 - 4041386
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||    
T  4041466 ttcaccctttacgtttttaacgatttttgtatctgatgtacactatcgatttgaatgaatgaatatcattttatttttgtc 4041386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4778981 - 4779061
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||||| ||||||| ||  |||||||||||||    
T  4778981 ttcaccctttacgtttttagcgatgtttgtatttgatgtactctatcgatttgaatgaatgaatatagttttgtttttgtc 4779061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36692102 - 36692181
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  36692102 ttcaccctttacgttcttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgtatatcgttttgtttttgt 36692181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35220556 - 35220634
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||  || |||||||||||    
T  35220556 ttcaccctttacgtttttagcgatctttgtatctgatgtactctatcaatttgaatgaatgaatgtcgttttgtttttg 35220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33923933 - 33924013
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| ||||| |||||||||||  |||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  33923933 ttcaccttttacctttttagcgatttttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtc 33924013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 38445394 - 38445473
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  38445394 ttcatcctttacgtttttaacaatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 38445473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 11985098 - 11985028
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| |||| |||||    
T  11985098 tttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttttttttt 11985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12677323 - 12677246
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||| ||||||||||||  |||||||||||||| ||| |||||||||| ||||||| ||| ||||||||||    
T  12677323 ttcaccctttatgtttttagcgatgtttgtatctgatgtaatctgtcgatttgaatgaatgaatatcgttttgttttt 12677246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7646706 - 7646786
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  || ||| ||||||||| |||||||||||| ||||||| ||| |||||||||||||    
T  7646706 ttcaccttttacgtttttagcgatctttatatttgatgtactttatcgatttgaatgaatgaatatcgttttgtttttgtc 7646786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33585607 - 33585527
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||| ||||  |||||||||||||||||||| |||||||| ||| ||| ||| |||||||||||||    
T  33585607 ttcatcctttacgtttttaacgatgtttgtatctgatgtactctattgatttgaatgaaagaatatcgttttgtttttgtc 33585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37876478 - 37876398
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||| ||||||||||||  |||||| |||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  37876478 ttcaccatttatgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 37876398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 1421908 - 1421979
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||||||||| |||  |||||||||||||||| |||||||||||| ||||||| |||||||| ||||    
T  1421908 cctttacgtttttagtgatgtttgtatctgatgtactttatcgatttgaatgaatgaatatcattttttttt 1421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29173589 - 29173512
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| |||||||||||||||||||  |||||||||||||| || ||| ||||||| |||| || ||||||||||||||    
T  29173589 ttcatcctttacgtttttagcgatgtttgtatctgatgtaatcaatcaatttgaatgaataaatatcattttgttttt 29173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4904017 - 4903938
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||||||| ||| || ||| |||||||||||||| |||| || ||||||| ||| ||||||||||||    
T  4904017 ttcagcctttacgtttttagcaatatttatatttgatgtactctatcaatttaaatgaatgaatatcgttttgtttttgt 4903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7677745 - 7677665
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  || |||||||| ||||||||| |||| ||  |||||| ||| |||||||||||||    
T  7677745 ttcaccttttacgtttttagcgatgtttatatctgatatactctatcaatttaaaaaaatgaatatcgttttgtttttgtc 7677665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10929893 - 10929972
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| |||||||||||| ||||  | |||| || |||||| ||||||||||||||| ||| |||||||||||||    
T  10929893 ttcaccctttatgtttttagcgat-cttgattttgatatattctatcaatttgaacgaatgaatatctttttgtttttgtc 10929972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 12554015 - 12553961
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| ||||||||| ||||||| ||||||| |||||||| ||||||||    
T  12554015 ttgtatctgatatactctatcaatttgaatgaatgaatatcattttatttttgtc 12553961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 17249012 - 17248943
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||| ||||  ||||||||| | |||||||||||| ||||||| |||||||| |||||    
T  17249012 tttacgtttttagcgat-cttgattctgatgtattttatcgatttgaatgaatgaatatcattttattttt 17248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 30923296 - 30923250
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  30923296 tgatgtactctatcaatttgaatgaatgaatatcattttgtttttgt 30923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4100563 - 4100635
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||||||||||  ||||     ||||| |||||||||||||| ||||||| ||| ||||||||||    
T  4100563 ttcaccctttacgtttttagcgatgtttgt-----atgtaatctatcgatttgaatgaatgaatatcgttttgttttt 4100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 14416420 - 14416473
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||| |||||| ||||||| |||| || ||||||||||||||||    
T  14416420 ttgtatctgatgtattctatcaatttgaatgaataaatatcattttgtttttgt 14416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30399901 - 30399824
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| ||||||| ||||| |||||| || |||||||||||||| ||| |||||||  |||||| |||||||| |||||    
T  30399901 ttcatcctttacattttttgcgatatttatatctgatgtactcgatcaatttgaataaatgaatatcattttattttt 30399824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 32448458 - 32448409
Alignment:
Q  32 tctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  32448458 tctgatgtattctatcaatttgaatgaatgaatatcattttgtttttgtc 32448409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 25508933 - 25508861
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| ||||||| ||||  |||||| |||||||||||||| ||||||| |||| || ||| ||||||||||||    
T  25508933 tttatgtttttaccgatgtttgtatatgatgtactctatcaatttgaatgaataaatatcgttttgtttttgt 25508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 4193097 - 4193144
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  4193097 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 4193144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 9374384 - 9374337
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  9374384 tgatgtactctgtcgatttgaatgaatgaatatcgttttgtttttgtc 9374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 25087295 - 25087342
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  25087295 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25087342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 31580476 - 31580429
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  31580476 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 31580429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 36234258 - 36234305
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  36234258 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 36234305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 4228383 - 4228429
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  4228383 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 9169126 - 9169056
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgt 74  Q
    ||||||||||||||||| |||  || ||||||||| |||| ||||||||||| ||| ||| ||| ||||||    
T  9169126 accctttacgtttttagtgatgtttttatctgatgcactcaatcgatttgaatgaacgaatatcgttttgt 9169056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 21570229 - 21570183
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  21570229 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 21570183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 32913489 - 32913535
Alignment:
Q  35 gatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  32913489 gatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 32913535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27097279 - 27097238
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtact 42  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  27097279 ttcaccctttacgtttttagagatatttgtatttgatgtact 27097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 37994542 - 37994591
Alignment:
Q  32 tctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||| |||||| ||||||| ||||||| ||| |||||||||||||    
T  37994542 tctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtc 37994591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 38575307 - 38575263
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||    
T  38575307 tgatgtaatctctcgatttgaatgaatgaatatcattttgttttt 38575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7883110 - 7883030
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  7883110 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtc 7883030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30568190 - 30568110
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  30568190 ttcaccctttacgtttttagcgatgtttgtatatgatgtaatctatcaatttgaatgaatgaatatcattttgtttttgtc 30568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16928626 - 16928547
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| || ||| |||||    
T  16928626 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttctgtctttgt 16928547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33214540 - 33214463
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||||||||||||||||||||||   || ||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  33214540 ttcaccctttacgtttttagcgacgtttatatctaatgtactctatcgatttgaatgaatgaatatcgttttgttttt 33214463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40211171 - 40211091
Alignment:
Q  1 ttcaccctttacg--tttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    |||||||||||||  |||||||||||  || |||||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  40211171 ttcaccctttacgcgtttttagcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttg 40211091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 40618935 - 40618862
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||  |||||||||||||| |||||| ||||||| ||||||| ||| |||||||||||||    
T  40618935 tttacgtttttagcgatgtttgtatctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtc 40618862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1236566 - 1236487
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||| || ||||  ||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  1236566 ttcatcctttacgtttttagcaat-cttgattctgatgtattctatcgatttgaatgaatgaatatcattttgtttttgtc 1236487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23230863 - 23230943
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||  ||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  23230863 ttcaccatttacacttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgcttttgtc 23230943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31013477 - 31013397
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||| ||  |||||||||||||||| ||||||| |||| ||||||  ||| |||||||||||||    
T  31013477 ttcaccctttacgtttttagcaatgtttgtatctgatgtactttatcgatatgaatgaatgactatcgttttgtttttgtc 31013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9637278 - 9637199
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| ||||||||||||| |||  ||||||||||||||||||||| |||| || ||||||| ||| ||||||||||||    
T  9637278 ttcaccatttacgtttttagtgatgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgtttttgt 9637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 45445680 - 45445602
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttg 79  Q
    |||||| |||||||||||| ||||  |||||||||||||| || ||||||||||| ||||||| ||| |||||||||||    
T  45445680 ttcaccttttacgtttttaacgatgtttgtatctgatgtaatccatcgatttgaatgaatgaatatcgttttgtttttg 45445602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8412391 - 8412311
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||| ||||||||||||  ||||||||||| || ||||| |||||||| ||||||| ||| |||| ||||||||    
T  8412391 ttcaccctttatgtttttagcgatgtttgtatctgatttaatctattgatttgaatgaatgaatatcgttttatttttgtc 8412311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17693482 - 17693402
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| |||||| |||||||||||  |||||| |||||||||||||| ||||||  ||||||| ||| |||||||||||||    
T  17693482 ttcactctttacatttttagcgatgtttgtatttgatgtactctatcaatttgagtgaatgaatatcgttttgtttttgtc 17693402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27498235 - 27498155
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||| |||||  |||  ||||||||||||||||||||| ||||||| ||||||| || ||||| ||||||||    
T  27498235 ttcaccctttacgattttaatgatgtttgtatctgatgtactctatcaatttgaatgaatgaatattattttatttttgtc 27498155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28086672 - 28086601
Alignment:
Q  10 tacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||  |||||||||||||||| |||| |||||||  |||||| ||| |||||||||||||    
T  28086672 tacgtttttagcgatgtttgtatctgatgtactatatcaatttgaataaatgaatatcgttttgtttttgtc 28086601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41684593 - 41684655
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| |||| || |||||||    
T  41684593 ttcaccctttacgtttttagcgatgtttatatctgatgtactctatcaatttaaatgaatgaa 41684655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24099125 - 24099046
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||  ||||||||| ||| || ||||||| ||||||| ||| |||||||||||||    
T  24099125 ttcaccctttacgtttttagcgatg-ttgattctgatgtattctgtcaatttgaatgaatgaatatcgttttgtttttgtc 24099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7198064 - 7198003
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||||| ||||||| |||||||    
T  7198064 ttcaccctttacgtttttagcgat-cttgattctgatgtattctatcaatttgaatgaatgaa 7198003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25190934 - 25190872
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    |||||| |||||| ||||||| ||  |||||||||||||| |||||||||||||| |||||||    
T  25190934 ttcaccttttacgattttagcaatgtttgtatctgatgtaatctatcgatttgaatgaatgaa 25190872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3673661 - 3673741
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||||| |  || |||||  |||| | |||| ||||||| ||||||| ||| |||||||||||||    
T  3673661 ttcaccctttacgtttttagcgttgtttatatctagtgtattatatcaatttgaatgaatgaatatcgttttgtttttgtc 3673741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21238008 - 21238087
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||||||||  |||  | ||||||| |||||| ||||||| ||||||| ||  |||||||||||||    
T  21238008 ttcaccctttacgtttttagcgat-gttgattatgatgtattctatcaatttgaatgaatgaatattgttttgtttttgtc 21238087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 37971523 - 37971587
Alignment:
Q  17 ttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||  |||||||||||||||||||| |||||||  ||||||| ||| |||| ||||||||    
T  37971523 ttagcgatgtttgtatctgatgtactctattgatttgagtgaatgaatatcgttttatttttgtc 37971587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 14906744 - 14906697
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  14906744 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 14906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 10377932 - 10377974
Alignment:
Q  39 tactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||    
T  10377932 tactctatcgatttgaatgaatgaatatcgttttgtttttgtc 10377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 19443893 - 19443843
Alignment:
Q  30 tatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||| ||||||| ||||||| ||| |||| |||||||    
T  19443893 tatctgatgtactctatcaatttgaatgaatgaatatcgttttatttttgt 19443843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3240636 - 3240681
Alignment:
Q  36 atgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| |||||| ||||||| ||||||||||| |||||||||||||    
T  3240636 atgtattctatcaatttgaatgaatgaacatcgttttgtttttgtc 3240681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15344528 - 15344609
Alignment:
Q  1 ttcaccctttacgtttttagcgat-acttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||   |||  ||||||||| |||||| ||||||| |||| || |||||||| ||||||||    
T  15344528 ttcatcctttacgtttttagcgatcttttgattctgatgtattctatcaatttgaatgaataaatatcattttatttttgtc 15344609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15433593 - 15433674
Alignment:
Q  1 ttcaccctttacgtttttagcgat-acttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||   |||  ||||||||| |||||| ||||||| |||| || |||||||| ||||||||    
T  15433593 ttcatcctttacgtttttagcgatcttttgattctgatgtattctatcaatttgaatgaataaatatcattttatttttgtc 15433674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15524897 - 15524978
Alignment:
Q  1 ttcaccctttacgtttttagcgat-acttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||   |||  ||||||||| |||||| ||||||| |||| || |||||||| ||||||||    
T  15524897 ttcatcctttacgtttttagcgatcttttgattctgatgtattctatcaatttgaatgaataaatatcattttatttttgtc 15524978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 13977814 - 13977850
Alignment:
Q  35 gatgtactctatcgatttgaacgaatgaacatcattt 71  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  13977814 gatgtactctatcaatttgaacgaatgaatatcattt 13977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16247094 - 16247014
Alignment:
Q  1 ttcaccctttacgttttt-agcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||| |  |||  |||||||||||||| || ||| |||||||  |||||| |||||||| |||||||    
T  16247094 ttcaccctttacgttttttattgatgtttgtatctgatgtattccatcaatttgaataaatgaatatcattttatttttgt 16247014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 24186523 - 24186463
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatca 68  Q
    |||||||||||| ||||  |||||| |||||||||||||| |||||||  |||||| ||||    
T  24186523 tttacgtttttatcgatgtttgtatatgatgtactctatctatttgaataaatgaaaatca 24186463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4413335 - 4413414
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  4413335 ttcatcctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaacgaataaatatcgttttgtttttgt 4413414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11462353 - 11462274
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  11462353 ttcaccatttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49504466 - 49504386
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||    
T  49504466 ttcaccctttacgtttttaacgatgtttgtatcttatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtc 49504386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44915860 - 44915940
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||    
T  44915860 ttcatcctttacgtttttagtgatgtttgtatctgatgtactctatcaatttgaatgaatgaatatcattttatttttgtc 44915940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10776332 - 10776253
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||||| ||||||| ||| ||| ||||||||||||||||    
T  10776332 ttcaccctttacgtttttagcgatgtttgcatctgatatactctatcaatttgaatgaacgaatatcattttgtttttgt 10776253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21687599 - 21687678
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| ||||||||| |||||||  |||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||    
T  21687599 ttcaccttttacgtttctagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgt 21687678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24583171 - 24583247
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| ||||||||||||||||||| ||||  ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  24583171 ttcatcctttacgtttttagcgat-cttgattctgatgtattctatcgatttgaatgaatgaatatcattttgttttt 24583247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 26535564 - 26535637
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  26535564 tttacgtttttagctatgtttgtatctgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 26535637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7337534 - 7337454
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| || | ||||||||    
T  7337534 ttcaccctttatatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttatatttttgtc 7337454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29738535 - 29738456
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| || |||| |||  ||||||||||||    
T  29738535 ttcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgattgaatatc-gtttgtttttgtc 29738456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32395218 - 32395298
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||||||||||||||| || |  |||||| |||||||||||||||||||||| | ||||| ||| |||||||||||||    
T  32395218 ttcaccctttacgtttttaacggtgtttgtatttgatgtactctatcgatttgaatggatgaatatcgttttgtttttgtc 32395298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34878149 - 34878069
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||||||  ||  |||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  34878149 ttcaccttttacgtttttagcgatgtttccatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtc 34878069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36894264 - 36894200
Alignment:
Q  16 tttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  36894264 tttagcgatatttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 36894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19596331 - 19596252
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||| |||||||||||||||||| || ||||| ||||| ||||| |||||||| ||| ||| ||||||||||||||||    
T  19596331 ttcaccttttacgtttttagcgatatttctatctaatgtaatctattgatttgaatgaacgaatatcattttgtttttgt 19596252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 35484258 - 35484191
Alignment:
Q  5 ccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcatttt 72  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  35484258 ccctttacatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttt 35484191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 21695368 - 21695315
Alignment:
Q  179 ctcttctatatcatttttcttgtcatctcattcgacatgaaaaatattgccaca 232  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  21695368 ctcttctatatcatttttcttgtcatctaattcgaaatgaaaaatattgacaca 21695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 21947486 - 21947413
Alignment:
Q  4 accctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||| |||||| ||||| |||||| |||||||||||||||||||||| ||||||| ||| |||| ||||    
T  21947486 accctttacatttttaacgatatttgtatatgatgtactctatcgatttgaatgaatgaatatcgttttatttt 21947413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24583367 - 24583443
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| ||||||| ||||||||||| ||||  ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  24583367 ttcatcctttacatttttagcgat-cttgattctgatgtattctatcgatttgaatgaatgaatatcattttgttttt 24583443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51373729 - 51373652
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    ||||||||||||||||||| ||||  |||||||| ||||||| |||| ||||||| ||||||||||| |||| |||||    
T  51373729 ttcaccctttacgtttttatcgatgtttgtatctaatgtactttatcaatttgaatgaatgaacatcgttttattttt 51373652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8211178 - 8211098
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||||| ||||  ||||||| ||  |||||||||||||    
T  8211178 ttcacgctttacgtttttagcgatgtttgtatctaatgtactctatcgaattgattgaatgaatattgttttgtttttgtc 8211098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 45415779 - 45415859
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||  |||||| ||||  | ||| |||||||||||||    
T  45415779 ttcaccctttacgtttttagcgatatgtgtatatgatgtactctatcattttgaatgaattgatatcgttttgtttttgtc 45415859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14872860 - 14872939
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||| | ||  |||||  |||||| ||||||||||||||||||| || ||||||| ||||||||||||||||    
T  14872860 ttcaccctttacttcttctgcgatgtttgtatgtgatgtactctatcgatttaaatgaatgaatatcattttgtttttgt 14872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 41081525 - 41081478
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  41081525 tgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtc 41081478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 940459 - 940536
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgttttt 78  Q
    |||| |||||| ||||||||||||  |||||||| ||||||||||| ||||| || ||||||| ||| ||||||||||    
T  940459 ttcatcctttaagtttttagcgatgtttgtatcttatgtactctattgatttaaatgaatgaatatcgttttgttttt 940536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 16989599 - 16989668
Alignment:
Q  8 tttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    ||||||||||||| |||  |||||| ||||||| |||||||||||||| ||||||| ||| |||||||||    
T  16989599 tttacgtttttagtgatgtttgtatatgatgtaatctatcgatttgaatgaatgaaaatcgttttgtttt 16989668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44543493 - 44543571
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| ||||||||||||||||||| ||||  ||||||||| ||||| |||||||| | ||||| |||||||||||||||||    
T  44543493 ttcatcctttacgtttttagcgat-cttgattctgatgtattctattgatttgaatg-atgaatatcattttgtttttgtc 44543571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50377544 - 50377624
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||||||  || |||||||||||   |||| ||||||| ||||||| ||| |||||||||||||    
T  50377544 ttcatcctttacgtttttagcgatgtttatatctgatgtatcttatcaatttgaatgaatgaatatcgttttgtttttgtc 50377624  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23289262 - 23289187
Alignment:
Q  2 tcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    |||| |||||||| |||||||||  |||||| ||||||| |||||||||||||| ||||||| ||| |||| ||||    
T  23289262 tcactctttacgtatttagcgatgtttgtatatgatgtaatctatcgatttgaatgaatgaatatcgttttatttt 23289187  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 47133129 - 47133203
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||||||  |||  ||||||||| |||||| ||||||| ||||||| ||| |||||||||||||    
T  47133129 cctttacgtttttagcgatg-ttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtc 47133203  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1742508 - 1742570
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaa 63  Q
    ||||||||||||||||||||||||  || ||||||||||| | || ||||||||| |||||||    
T  1742508 ttcaccctttacgtttttagcgatgtttatatctgatgtaatatagcgatttgaatgaatgaa 1742570  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15431537 - 15431458
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||| |||||||||||||||| ||  |||||||||||||||||| |  | ||||| ||||||| ||||||||| |||||||    
T  15431537 ttcatcctttacgtttttagcaatgtttgtatctgatgtactctgt-taattgaatgaatgaatatcattttgattttgtc 15431458  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39888403 - 39888483
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| ||||||||||| || |||  |||||||||||||| | |||| ||||| | ||||||| ||| |||||||||||||    
T  39888403 ttcactctttacgttttgagtgatgtttgtatctgatgtattatatcaatttgtatgaatgaatatcgttttgtttttgtc 39888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49627134 - 49627208
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    |||| ||||||||||||||||||| ||||  ||||||||| |||||||||||| | ||||||| |||||||| ||||    
T  49627134 ttcatcctttacgtttttagcgat-cttgattctgatgtattctatcgatttg-atgaatgaatatcattttttttt 49627208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 5984066 - 5984117
Alignment:
Q  30 tatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||| || |||||||||||||| ||||||| ||| |||||||||||||    
T  5984066 tatctgatatattctatcgatttgaatgaatgaatatcgttttgtttttgtc 5984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 14545735 - 14545782
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  14545735 tgatgtaatctctctatttgaacgaatgaatatcattttgtttttgtc 14545782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 27456743 - 27456790
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  27456743 tgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 27456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 30879335 - 30879382
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  30879335 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 30879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 48217697 - 48217744
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  48217697 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 48217744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 35584444 - 35584398
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  35584444 tgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 35584398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 20266564 - 20266609
Alignment:
Q  36 atgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  20266564 atgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 20266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13144683 - 13144608
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttt 77  Q
    |||||||||||| |||||| ||||  |||||| |||||||||||||| |||||||  |||| | |||||||| ||||    
T  13144683 ttcaccctttacatttttaacgatgtttgtat-tgatgtactctatcaatttgaataaatgcatatcattttttttt 13144608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 44637679 - 44637723
Alignment:
Q  36 atgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||| ||| ||||||| |||||||| |||||||    
T  44637679 atgtactctatcgattggaatgaatgaatatcattttatttttgt 44637723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1844 - 1765
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||||| |||||| | |||||||||||||| ||||||| ||||||||||| ||||    
T  1844 ttcaccctttacgtttttagcgatgtttgtacctgatgcattctatcgatttgaatgaatgaatatcattttgttattgt 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9913 - 9834
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||| ||  |||||| |||||    
T  9913 ttcaccctttacgtttttagcgatgtttgtatctggtgtactctatcgatttgaatgaatgaatattgttttgtctttgt 9834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 71741 - 71661
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||| ||||||| || |||  ||| |||||||||||||    
T  71741 ttcaccctttacgtttctagcgatgtttgtatctgatgtactctatcaatttgaatgactgagtatctttttgtttttgtc 71661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15710 - 15790
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    ||||| ||||| ||||||||||||  ||||| ||||||||||| ||||||||||| |||| || ||| |||||||||||||    
T  15710 ttcactctttatgtttttagcgatgtttgtaactgatgtactcaatcgatttgaaggaataaatatcgttttgtttttgtc 15790  T

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Target: scaffold0445 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1562 - 1613
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgattt 52  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  1562 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcaattt 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31145 - 31066
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||| |||||||||||| ||||||  |||||||||||||||| |||| ||||||| ||||||| ||| |||| |||||||    
T  31145 ttcatcctttacgttttaagcgatgtttgtatctgatgtactatatcaatttgaatgaatgaatatcgttttatttttgt 31066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32618 - 32564
Alignment:
Q  1 ttcaccctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaa 55  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||    
T  32618 ttcaccctttacgtttttagccatgtttgtatctgatgtactctatcgttttgaa 32564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 8736 - 8810
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||| || |||||||| |||||| | |||||||||||| ||| ||| ||| |||| |||||||    
T  8736 cctttacgtttttagctatgcttgtatcagatgtattttatcgatttgaatgaaggaatatcgttttatttttgt 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 201194 - 201148
Alignment:
Q  34 tgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  201194 tgatgtaatctatcgatttgaatgaatgaatatcattttgtttttgt 201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 7971 - 8025
Alignment:
Q  27 ttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgtc 81  Q
    |||||| |||||||||||||| ||||||| ||||||| ||| |||| ||||||||    
T  7971 ttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttttttttgtc 8025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 71166 - 71092
Alignment:
Q  6 cctttacgtttttagcgatacttgtatctgatgtactctatcgatttgaacgaatgaacatcattttgtttttgt 80  Q
    |||||||||||||||||||  |||||| | ||  |||||||| | ||||| ||||||| |||||||| |||||||    
T  71166 cctttacgtttttagcgatgtttgtatttaattgactctatcaaattgaatgaatgaatatcattttatttttgt 71092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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