View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_265 (Length: 276)

Name: NF10954A_low_265
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_265
NF10954A_low_265
[»] chr8 (20 HSPs)
chr8 (1-266)||(6483508-6483773)
chr8 (208-249)||(44047543-44047584)
chr8 (208-249)||(45041327-45041368)
chr8 (206-266)||(490548-490608)
chr8 (208-266)||(1928598-1928656)
chr8 (208-250)||(5057595-5057637)
chr8 (200-249)||(12491140-12491190)
chr8 (208-250)||(30812827-30812869)
chr8 (208-253)||(3638346-3638391)
chr8 (208-249)||(11523734-11523775)
chr8 (208-249)||(14742093-14742134)
chr8 (208-249)||(25473414-25473455)
chr8 (208-249)||(32931190-32931231)
chr8 (201-249)||(36394951-36395000)
chr8 (208-249)||(36545379-36545420)
chr8 (210-255)||(36565254-36565299)
chr8 (208-249)||(42469738-42469779)
chr8 (208-249)||(44529455-44529496)
chr8 (208-249)||(44699696-44699737)
chr8 (208-249)||(45419465-45419506)
[»] chr4 (31 HSPs)
chr4 (208-266)||(45209216-45209274)
chr4 (208-266)||(29399017-29399075)
chr4 (208-249)||(15665331-15665372)
chr4 (208-261)||(22420728-22420781)
chr4 (208-249)||(23906308-23906349)
chr4 (201-249)||(51811283-51811330)
chr4 (220-255)||(4136766-4136801)
chr4 (208-255)||(17900704-17900751)
chr4 (208-255)||(19154874-19154921)
chr4 (200-250)||(37042666-37042717)
chr4 (208-251)||(38017317-38017360)
chr4 (208-247)||(47372936-47372975)
chr4 (208-250)||(44719372-44719414)
chr4 (208-266)||(49738561-49738619)
chr4 (208-249)||(436459-436500)
chr4 (208-249)||(7947167-7947208)
chr4 (208-249)||(21528518-21528559)
chr4 (208-249)||(27450191-27450232)
chr4 (208-249)||(30634117-30634158)
chr4 (208-249)||(31959825-31959866)
chr4 (208-249)||(32479268-32479309)
chr4 (208-249)||(36255533-36255574)
chr4 (208-249)||(48174104-48174145)
chr4 (208-265)||(49686907-49686964)
chr4 (208-249)||(50238626-50238667)
chr4 (208-249)||(50238712-50238753)
chr4 (208-249)||(50862861-50862902)
chr4 (208-249)||(51438675-51438716)
chr4 (208-249)||(52569526-52569567)
chr4 (208-249)||(55007976-55008017)
chr4 (209-249)||(4441083-4441123)
[»] chr2 (27 HSPs)
chr2 (208-266)||(8197552-8197610)
chr2 (208-266)||(8202312-8202370)
chr2 (202-249)||(3720420-3720467)
chr2 (208-255)||(42092741-42092788)
chr2 (208-266)||(3481367-3481425)
chr2 (208-266)||(11992119-11992177)
chr2 (208-249)||(18959141-18959182)
chr2 (217-264)||(12026032-12026079)
chr2 (208-249)||(227419-227460)
chr2 (208-249)||(451659-451700)
chr2 (208-249)||(3635334-3635375)
chr2 (208-249)||(4807825-4807866)
chr2 (201-249)||(8181010-8181059)
chr2 (208-249)||(9531611-9531652)
chr2 (208-249)||(12474938-12474979)
chr2 (208-249)||(12520073-12520114)
chr2 (208-249)||(17670698-17670739)
chr2 (208-249)||(25834908-25834949)
chr2 (208-249)||(28508908-28508949)
chr2 (208-249)||(30306262-30306303)
chr2 (208-249)||(35755256-35755297)
chr2 (208-249)||(38328381-38328422)
chr2 (208-249)||(41763054-41763095)
chr2 (208-249)||(43573141-43573182)
chr2 (206-266)||(2515180-2515240)
chr2 (208-264)||(10516760-10516816)
chr2 (201-249)||(38430114-38430162)
[»] chr1 (32 HSPs)
chr1 (208-266)||(39525978-39526036)
chr1 (208-249)||(7133313-7133354)
chr1 (208-266)||(19908395-19908453)
chr1 (208-266)||(38869095-38869153)
chr1 (208-262)||(41165499-41165553)
chr1 (208-249)||(4318856-4318897)
chr1 (212-249)||(9599409-9599446)
chr1 (208-249)||(37311766-37311807)
chr1 (209-249)||(32082768-32082808)
chr1 (201-249)||(32404530-32404578)
chr1 (208-252)||(33560869-33560913)
chr1 (209-261)||(43598934-43598986)
chr1 (203-250)||(7124370-7124417)
chr1 (208-266)||(25715337-25715395)
chr1 (208-266)||(27072498-27072556)
chr1 (208-266)||(37462887-37462945)
chr1 (208-266)||(41560442-41560500)
chr1 (208-266)||(52532627-52532685)
chr1 (208-249)||(1210975-1211016)
chr1 (208-249)||(2544823-2544864)
chr1 (208-249)||(4001466-4001507)
chr1 (208-249)||(22175375-22175416)
chr1 (208-249)||(25979242-25979283)
chr1 (208-249)||(29577482-29577523)
chr1 (208-249)||(30202141-30202182)
chr1 (208-249)||(36339815-36339856)
chr1 (208-249)||(42539223-42539264)
chr1 (208-249)||(43481809-43481850)
chr1 (208-249)||(44941787-44941828)
chr1 (208-249)||(49347404-49347445)
chr1 (208-249)||(52561600-52561641)
chr1 (208-249)||(52921310-52921351)
[»] chr7 (30 HSPs)
chr7 (208-249)||(20158682-20158723)
chr7 (201-249)||(9210707-9210756)
chr7 (208-249)||(31681031-31681072)
chr7 (208-249)||(40630664-40630705)
chr7 (208-255)||(34745971-34746018)
chr7 (196-249)||(6263489-6263543)
chr7 (208-266)||(30814136-30814194)
chr7 (208-249)||(2885733-2885774)
chr7 (208-249)||(6375098-6375139)
chr7 (208-249)||(7273330-7273371)
chr7 (208-249)||(11594190-11594231)
chr7 (208-249)||(12841286-12841327)
chr7 (208-253)||(26847832-26847877)
chr7 (208-249)||(27649010-27649051)
chr7 (208-249)||(28208339-28208380)
chr7 (208-249)||(28708611-28708652)
chr7 (208-249)||(29650614-29650655)
chr7 (208-249)||(31005435-31005476)
chr7 (208-249)||(31682613-31682654)
chr7 (208-249)||(31869113-31869154)
chr7 (208-249)||(34869650-34869691)
chr7 (208-249)||(35906212-35906253)
chr7 (208-249)||(36101788-36101829)
chr7 (208-249)||(37618175-37618216)
chr7 (208-249)||(39906383-39906424)
chr7 (208-249)||(40979939-40979980)
chr7 (201-249)||(42187671-42187720)
chr7 (208-249)||(43281904-43281945)
chr7 (209-253)||(17759499-17759543)
chr7 (209-249)||(42969928-42969968)
[»] chr3 (18 HSPs)
chr3 (208-264)||(49503579-49503635)
chr3 (208-249)||(19676092-19676133)
chr3 (198-249)||(41529991-41530043)
chr3 (208-248)||(48734158-48734198)
chr3 (210-249)||(7446275-7446314)
chr3 (210-249)||(7454417-7454456)
chr3 (208-266)||(45374488-45374546)
chr3 (208-254)||(52139025-52139071)
chr3 (208-249)||(5169062-5169103)
chr3 (208-249)||(12096716-12096757)
chr3 (208-249)||(24778620-24778661)
chr3 (208-249)||(29601122-29601163)
chr3 (208-249)||(31566172-31566213)
chr3 (212-249)||(40273220-40273257)
chr3 (208-249)||(40672378-40672419)
chr3 (208-249)||(42510027-42510068)
chr3 (208-249)||(48508465-48508506)
chr3 (208-249)||(52927859-52927900)
[»] chr6 (9 HSPs)
chr6 (200-266)||(21089610-21089677)
chr6 (208-266)||(34516-34574)
chr6 (208-249)||(608391-608432)
chr6 (209-266)||(8364769-8364826)
chr6 (208-249)||(9707000-9707041)
chr6 (208-249)||(12890805-12890846)
chr6 (208-249)||(28085606-28085647)
chr6 (208-249)||(30789085-30789126)
chr6 (208-249)||(34934841-34934882)
[»] chr5 (24 HSPs)
chr5 (208-266)||(15588401-15588459)
chr5 (212-248)||(38830550-38830586)
chr5 (210-266)||(42272690-42272746)
chr5 (206-249)||(13561395-13561438)
chr5 (208-255)||(28411900-28411947)
chr5 (208-266)||(408505-408563)
chr5 (208-250)||(2645219-2645261)
chr5 (208-266)||(20456986-20457044)
chr5 (208-245)||(79747-79784)
chr5 (208-249)||(2915507-2915548)
chr5 (208-249)||(3302074-3302115)
chr5 (208-249)||(4496614-4496655)
chr5 (208-249)||(5558371-5558412)
chr5 (208-249)||(5860064-5860105)
chr5 (208-249)||(7359272-7359313)
chr5 (200-252)||(11002423-11002476)
chr5 (208-249)||(16347391-16347432)
chr5 (208-249)||(28985313-28985354)
chr5 (208-249)||(29816612-29816653)
chr5 (208-249)||(30213805-30213846)
chr5 (208-249)||(38685197-38685238)
chr5 (208-249)||(42576240-42576281)
chr5 (217-249)||(219480-219512)
chr5 (208-248)||(1287590-1287630)
[»] scaffold1318 (1 HSPs)
scaffold1318 (208-249)||(561-602)
[»] scaffold0570 (1 HSPs)
scaffold0570 (208-249)||(959-1000)
[»] scaffold0168 (1 HSPs)
scaffold0168 (208-249)||(28900-28941)
[»] scaffold0018 (1 HSPs)
scaffold0018 (208-249)||(31698-31739)
[»] scaffold0050 (1 HSPs)
scaffold0050 (209-249)||(58238-58278)


Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 6483773 - 6483508
Alignment:
Q  1 tcaaaataaaaaataaagaacacaaggtagcaacaatagcataatatcattaggttcctacgcaatattaccattcaccaaaaggtgattttctcccaca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  6483773 tcaaaataaaaaataaagaacacaaagtagcaacaatagcataatatcattaggttcctgcacaatattaccattcaccaaaaggtgattttctcccaca 6483674  T
Q  101 tcacctctaatgttatactattgctcgcacagatagattgtttagaagttaaaaacacaaattcttaatttgattactatcaatgtacctatagcaaatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483673 tcacctctaatgttatactattgctcgcacagatagattgtttagaagttaaaaacacaaattcttaatttgatcactatcaatgtacctatagcaaatt 6483574  T
Q  201 acaacaacaagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483573 acaacaacaagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 6483508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 44047543 - 44047584
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  44047543 caagccttatcccactaagtggggtcagctacatggatcaaa 44047584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 45041327 - 45041368
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  45041327 caagccttatcccactaagtggggtcagctacatggatcaaa 45041368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 490608 - 490548
Alignment:
Q  206 aacaagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||  |||| ||||| ||||    
T  490608 aacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttct 490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 1928598 - 1928656
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||  |||| ||||| ||||    
T  1928598 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttct 1928656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 5057637 - 5057595
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    |||||||| |||||||||||||| |||| ||||||||||||||    
T  5057637 caagccttatcccactaagtaggatcagttacatggatcaaac 5057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 12491140 - 12491190
Alignment:
Q  200 tacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  12491140 tacaacaactaagccttatcccactaagtggggtcggctacatggatcaaa 12491190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 30812827 - 30812869
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    |||||||||||||||||||| ||||| |||||||| |||||||    
T  30812827 caagccttttcccactaagtggggtcggctacatgaatcaaac 30812869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 3638346 - 3638391
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaac 253  Q
    |||||||| ||||||||||| ||||||||| |||||| ||||||||    
T  3638346 caagccttatcccactaagtggggtcagctccatggaacaaacaac 3638391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 11523734 - 11523775
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  11523734 caagccttatcccactaagtggggtcggctacatggatcaaa 11523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 14742093 - 14742134
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  14742093 caagccttatcccactaagtggggtcggctacatggatcaaa 14742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 25473414 - 25473455
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  25473414 caagccttatcccactaagtggggtcggctacatggatcaaa 25473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 32931231 - 32931190
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||| ||||||||||||||| ||||| |||||||||||||||    
T  32931231 caaggcttttcccactaagtggggtcggctacatggatcaaa 32931190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 36394951 - 36395000
Alignment:
Q  201 acaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  36394951 acaacaacgaagccttatcccactaagtggggtcggctacatggatcaaa 36395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 36545420 - 36545379
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  36545420 caagccttatcccactaagtggggtcggctacatggatcaaa 36545379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 36565254 - 36565299
Alignment:
Q  210 agccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||| ||||||||||| ||||| ||||||||||||||| |||||    
T  36565254 agccttatcccactaagtggggtcggctacatggatcaaataacgc 36565299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 42469738 - 42469779
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||| ||||| |||||||||||||||||||||    
T  42469738 caagccttatcccaataagtggggtcagctacatggatcaaa 42469779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 44529496 - 44529455
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  44529496 caagccttatcccactaagtggggtcggctacatggatcaaa 44529455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 44699737 - 44699696
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| |||||| ||||||||    
T  44699737 caagccttttcccactaagtggggtctgctacagggatcaaa 44699696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 45419506 - 45419465
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  45419506 caagccttatcccactaagtggggtcggctacatggatcaaa 45419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 45209216 - 45209274
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  45209216 caagccttatcccactaagtggggtcggctacatggatcaaactacgccataatattct 45209274  T

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Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 29399075 - 29399017
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||||||||||||||| |||||||||||||| ||||||  |||| ||||| ||||    
T  29399075 caagccttttcccactaagtggggtcagctacatgaatcaaattacgccataatgttct 29399017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 15665372 - 15665331
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  15665372 caagccttatcccactaagtggggtcagctacatggatcaaa 15665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 22420728 - 22420781
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataat 261  Q
    |||||||| ||||||||||| |||||| |||||| ||||||||||||| |||||    
T  22420728 caagccttatcccactaagtggggtcaactacatagatcaaacaacgccataat 22420781  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 23906308 - 23906349
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  23906308 caagccttatcccactaagtggggtcagctacatggatcaaa 23906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 51811283 - 51811330
Alignment:
Q  201 acaacaacaagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  51811283 acaacaacaagccttatcccactaagt-gggtcggctacatggatcaaa 51811330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 4136766 - 4136801
Alignment:
Q  220 cactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||||||||| |||||||||||||||||||||    
T  4136766 cactaagtagggtcggctacatggatcaaacaacgc 4136801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 17900751 - 17900704
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||| ||||||||||| |||||||||| ||| ||||||||||||    
T  17900751 caagccttatcccactaagtggggtcagctaaatgaatcaaacaacgc 17900704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 19154874 - 19154921
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| |||||    
T  19154874 caagccttatcccactaagtggggtcagctgcatggatcaaataacgc 19154921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 37042666 - 37042717
Alignment:
Q  200 tacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37042666 tacaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaac 37042717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 38017360 - 38017317
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaaca 251  Q
    |||||||| |||||||||||||| || |||||||||||||||||    
T  38017360 caagccttatcccactaagtaggatcggctacatggatcaaaca 38017317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 47372975 - 47372936
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatca 247  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  47372975 caagccttatcccactaagtagggtcggctacatggatca 47372936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 44719372 - 44719414
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||    
T  44719372 caagtcttatcccactaagtagggtcggctacatggatcaaac 44719414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 49738561 - 49738619
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||| ||| ||||| ||||    
T  49738561 caagccttatcccactaaatggggtcggctacatggatcaaacaccgccataatgttct 49738619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 436500 - 436459
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  436500 caagccttatcccactaagtggggtcggctacatggatcaaa 436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7947208 - 7947167
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  7947208 caagccttatcccactaagtggggtcggctacatggatcaaa 7947167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 21528559 - 21528518
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  21528559 caagccttatcccactaagtggggtcggctacatggatcaaa 21528518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 27450191 - 27450232
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  27450191 caagccttatcccactaagtggggtcggctacatggatcaaa 27450232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30634117 - 30634158
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  30634117 caagccttatcccactaagtggggtcggctacatggatcaaa 30634158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 31959825 - 31959866
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31959825 caagccttatcccactaagtggggtcggctacatggatcaaa 31959866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 32479309 - 32479268
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  32479309 caagcctttttccactaagtggggtcggctacatggatcaaa 32479268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36255533 - 36255574
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  36255533 caagccttttcccactaagtggggtcggccacatggatcaaa 36255574  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 48174104 - 48174145
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  48174104 caagccttatcccactaagtggggtctgctacatggatcaaa 48174145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 49686964 - 49686907
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattc 265  Q
    |||| ||| ||||||||||| ||||| ||||||||| |||||| |||| |||||||||    
T  49686964 caagtcttatcccactaagtggggtcggctacatggttcaaacgacgccataatattc 49686907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 50238626 - 50238667
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  50238626 caagccttatcccactaagtggggtcggctacatggatcaaa 50238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 50238712 - 50238753
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  50238712 caagccttatcccactaagtggggtcggctacatggatcaaa 50238753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 50862902 - 50862861
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  50862902 caagccttatcccactaagtggggtcggctacatggatcaaa 50862861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 51438716 - 51438675
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| |||||| |||| |||||||||||||||||||||    
T  51438716 caagccttatcccacaaagttgggtcagctacatggatcaaa 51438675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 52569526 - 52569567
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  52569526 caagccttatcccactaagtggggtcggctacatggatcaaa 52569567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 55008017 - 55007976
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  55008017 caagccttatcccactaagtggggtcggctacatggatcaaa 55007976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 4441123 - 4441083
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  4441123 aagccttatcccactaagtggggtcggctacatggatcaaa 4441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 8197552 - 8197610
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||| || ||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  8197552 caagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattct 8197610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 8202312 - 8202370
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||| || ||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  8202312 caagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattct 8202370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 3720420 - 3720467
Alignment:
Q  202 caacaacaagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  3720420 caacaacaagccttctcccactaagtggggtcggctacatggatcaaa 3720467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 42092788 - 42092741
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  42092788 caagcctaatcctactaagtagggtcagctacatggatcaaacaacgc 42092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 3481425 - 3481367
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||||||| ||||||| |||||||||||||||||||||  |||| ||||| ||||    
T  3481425 caagccttttccaactaagtggggtcagctacatggatcaaattacgccataatgttct 3481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 11992119 - 11992177
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| | ||||||||| ||||||||||||||||||||| ||||| ||||| ||||    
T  11992119 caagccttattccactaagtggggtcagctacatggatcaaataacgccataatgttct 11992177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 18959182 - 18959141
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  18959182 caagccttatcccactaagtggggtcagctacatggatcaaa 18959141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 12026032 - 12026079
Alignment:
Q  217 tcccactaagtagggtcagctacatggatcaaacaacgcgataatatt 264  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||    
T  12026032 tcccactaagtggggtcagctacatggatcaaacgacgttataatatt 12026079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 227460 - 227419
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  227460 caagccttatcccactaagtggggtcggctacatggatcaaa 227419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 451659 - 451700
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  451659 caagccttgtcccactaagtggggtcggctacatggatcaaa 451700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 3635334 - 3635375
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  3635334 caagccttatcccactaagtggggtcggctacatggatcaaa 3635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 4807866 - 4807825
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  4807866 caagccttatcccactaagtggggtcggctacatggatcaaa 4807825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 8181059 - 8181010
Alignment:
Q  201 acaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  8181059 acaacaacgaagccttatcccactaagtggggtcggctacatggatcaaa 8181010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 9531611 - 9531652
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  9531611 caagccttatcccactaagtggggtcggctacatggatcaaa 9531652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 12474938 - 12474979
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  12474938 caagccttatcccactaagtggggtcggctacatggatcaaa 12474979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 12520073 - 12520114
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  12520073 caagccttatcccactaagtggggtcggctacatggatcaaa 12520114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 17670739 - 17670698
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  17670739 caagccttatcccactaagtggggtcggctacatggatcaaa 17670698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 25834949 - 25834908
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  25834949 caagccttatcccactaagtggggtcggctacatggatcaaa 25834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28508949 - 28508908
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28508949 caagccttatcccactaagtggggtcggctacatggatcaaa 28508908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 30306303 - 30306262
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  30306303 caagccttatcccactaagtggggtcggctacatggatcaaa 30306262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 35755256 - 35755297
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||||||||| ||| |||||||||||    
T  35755256 caagccttatcccactaagtagggtcggctgcatggatcaaa 35755297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 38328381 - 38328422
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  38328381 caagccttatcccactaagtggggtcggctacatggatcaaa 38328422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 41763054 - 41763095
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  41763054 caagccttatcccactaagtggggtcggctacatggatcaaa 41763095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 43573141 - 43573182
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  43573141 caagccttatcccactaagtggggtcggctacatggatcaaa 43573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 2515180 - 2515240
Alignment:
Q  206 aacaagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||||| ||||||||||| ||||| |||| || |||||||  |||| ||||||||||    
T  2515180 aacaagccttatcccactaagtggggtcggctagatagatcaaagtacgccataatattct 2515240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 10516760 - 10516816
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatatt 264  Q
    |||||||| |||||||||||  | ||||||||||||||||||  |||| ||||||||    
T  10516760 caagccttatcccactaagtgagatcagctacatggatcaaattacgccataatatt 10516816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 38430162 - 38430114
Alignment:
Q  201 acaacaacaagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||| |||||||| || |||||||| ||||| |||||||||||||||    
T  38430162 acaacaccaagccttatctcactaagtggggtcggctacatggatcaaa 38430114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 39526036 - 39525978
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||  ||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  39526036 caagcctggtcccactaaatagggtcagctacatggatcaaacgacgccataatattct 39525978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 7133313 - 7133354
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7133313 caagccttttcccactaagtggggtcagctacatggatcaaa 7133354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 19908395 - 19908453
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||||| |||||||||||||| |||| |||| |||||    
T  19908395 caagccttatcccactaagtggggtcaggtacatggatcaaactacgcaataagattct 19908453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 38869153 - 38869095
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||| |||||||||||||| ||||| |||||||||||||||| |||| ||||| ||||    
T  38869153 caagcattttcccactaagtggggtcggctacatggatcaaacgacgccataatgttct 38869095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 41165553 - 41165499
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataata 262  Q
    |||||||||||||||||||| ||||| |||||||||||||||  |||| ||||||    
T  41165553 caagccttttcccactaagtggggtcggctacatggatcaaatgacgccataata 41165499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 4318856 - 4318897
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  4318856 caagccttttcccactaagtggggtcggctacatggatcaaa 4318897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 9599409 - 9599446
Alignment:
Q  212 ccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9599409 ccttttcccactaagtaaggtcagctacatggatcaaa 9599446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 37311766 - 37311807
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  37311766 caagccttttcccactaagtggggtcggctacatggatcaaa 37311807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 32082768 - 32082808
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  32082768 aagccttttcccactaagtggggtcggctacatggatcaaa 32082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 32404530 - 32404578
Alignment:
Q  201 acaacaacaagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| |||||| ||||||||||| ||||| |||||||||||||||    
T  32404530 acaacaaccagccttatcccactaagtggggtcggctacatggatcaaa 32404578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 33560869 - 33560913
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaa 252  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  33560869 caagccttatcccactaagtagggttggctacatggatcaaacaa 33560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 43598934 - 43598986
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataat 261  Q
    ||||||| ||||| ||||||||||| |||||||||||||||| |||| |||||    
T  43598934 aagccttatcccagtaagtagggtctgctacatggatcaaactacgccataat 43598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 7124417 - 7124370
Alignment:
Q  203 aacaacaagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    |||||||| |||| |||||||||||  |||||||||||||||||||||    
T  7124417 aacaacaacccttatcccactaagtgaggtcagctacatggatcaaac 7124370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 25715337 - 25715395
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| |||||||||||  |||| |||||||||||||||  |||| ||||||||||    
T  25715337 caagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattct 25715395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 27072498 - 27072556
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||||||||||||||||| | |||| |||||||||||||||  |||| ||||| ||||    
T  27072498 caagccttttcccactaagcatggtcggctacatggatcaaattacgccataatgttct 27072556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 37462887 - 37462945
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||  |||| ||||| ||||    
T  37462887 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttct 37462945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 41560500 - 41560442
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||  |||| ||||| ||||    
T  41560500 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttct 41560442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 52532627 - 52532685
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||||||||||||||| ||||| |||||||| ||||||  |||| ||||| ||||    
T  52532627 caagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttct 52532685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 1211016 - 1210975
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  1211016 caagccttatcccactaagtggggtcggctacatggatcaaa 1210975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 2544864 - 2544823
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  2544864 caagccttttaccactaagtggggtcggctacatggatcaaa 2544823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 4001466 - 4001507
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||  |||||||||||||||    
T  4001466 caagccttttcccactaagtggggttggctacatggatcaaa 4001507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 22175416 - 22175375
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  22175416 caagccttatcccactaagtggggtcggctacatggatcaaa 22175375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 25979242 - 25979283
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  25979242 caagccttatcccactaagtggggtcggctacatggatcaaa 25979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 29577523 - 29577482
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  29577523 caagccttatcccactaagtggggtcggctacatggatcaaa 29577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30202141 - 30202182
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  30202141 caagccttatcccactaagtggggtcggctacatggatcaaa 30202182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36339815 - 36339856
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  36339815 caagcattttcccactaagtggagtcagctacatggatcaaa 36339856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 42539223 - 42539264
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  42539223 caagccttttcccactaagtggggtcgtctacatggatcaaa 42539264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 43481809 - 43481850
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  43481809 caagccttatcccactaagtggggtcggctacatggatcaaa 43481850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 44941787 - 44941828
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  44941787 caagccttatcccactaagtggggtcggctacatggatcaaa 44941828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 49347404 - 49347445
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  49347404 caagccttatcccactaagtggggtcggctacatggatcaaa 49347445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 52561600 - 52561641
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  52561600 caagccttatcccactaagtggggtcggctacatggatcaaa 52561641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 52921351 - 52921310
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  52921351 caagccttatcccactaagtggggtcggctacatggatcaaa 52921310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 20158682 - 20158723
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  20158682 caagccttatcccactaagtagggtcagctacatggatcaaa 20158723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 9210707 - 9210756
Alignment:
Q  201 acaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  9210707 acaacaacgaagccttatcccactaagtggggtcagctacatggatcaaa 9210756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 31681031 - 31681072
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  31681031 caagccttttcccactaagtggggtcggctacatggatcaaa 31681072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 40630705 - 40630664
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  40630705 caagccttttcccactaagtggggtcggctacatggatcaaa 40630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 34746018 - 34745971
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||||||||    
T  34746018 caagccttatcccactaagtggggtcggctacatgaatcaaacaacgc 34745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 6263543 - 6263489
Alignment:
Q  196 aaattacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||| |||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  6263543 aaataacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 6263489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 30814136 - 30814194
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||||| |||||||||||| ||||| |||||||||||||||  ||| |||||| ||||    
T  30814136 caagcctcttcccactaagtggggtcggctacatggatcaaattacgtgataatgttct 30814194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 2885733 - 2885774
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  2885733 caagccttatcccactaagtggggtcggctacatggatcaaa 2885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 6375139 - 6375098
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  6375139 caagccttatcccactaagtggggtcggctacatggatcaaa 6375098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7273371 - 7273330
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  7273371 caagccttatcccactaagtggggtcggctacatggatcaaa 7273330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 11594231 - 11594190
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  11594231 caagccttatcccactaagtggggtcggctacatggatcaaa 11594190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 12841286 - 12841327
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  12841286 caagccttatcccactaagtggggtcggctacatggatcaaa 12841327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 26847877 - 26847832
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaac 253  Q
    |||||||| ||||||||||| ||||| ||||| |||||||||||||    
T  26847877 caagccttatcccactaagtcgggtcggctacgtggatcaaacaac 26847832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 27649051 - 27649010
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  27649051 caagccttatcccactaagtggggtcggctacatggatcaaa 27649010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 28208339 - 28208380
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28208339 caagccttatcccactaagtggggtcggctacatggatcaaa 28208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28708652 - 28708611
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28708652 caagccttatcccactaagtggggtcggctacatggatcaaa 28708611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 29650655 - 29650614
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  29650655 caagccttatcccactaagtggggtcggctacatggatcaaa 29650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 31005476 - 31005435
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31005476 caagccttatcccactaagtggggtcggctacatggatcaaa 31005435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 31682613 - 31682654
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31682613 caagccttatcccactaagtggggtcggctacatggatcaaa 31682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 31869113 - 31869154
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31869113 caagccttatcccactaagtggggtcggctacatggatcaaa 31869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 34869691 - 34869650
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||| ||||||| |||||||||||||||    
T  34869691 caagccttatcccactaattagggtcggctacatggatcaaa 34869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 35906212 - 35906253
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  35906212 caagccttatcccactaagtggggtcggctacatggatcaaa 35906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36101788 - 36101829
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||| ||||||||||||||    
T  36101788 caagccttatcccactaagtggggtcaactacatggatcaaa 36101829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 37618216 - 37618175
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  37618216 caagccttatcccactaagtggggtcggctacatggatcaaa 37618175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 39906383 - 39906424
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  39906383 caagccttatcccactaagtggggtcggctacatggatcaaa 39906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 40979939 - 40979980
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  40979939 caagccttatcccactaagtggggtcggctacatggatcaaa 40979980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 42187720 - 42187671
Alignment:
Q  201 acaacaacaa-gccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||| ||||| ||||||||||| ||||| |||||||||||||||    
T  42187720 acaacaacaaagccttatcccactaagtggggtcggctacatggatcaaa 42187671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 43281945 - 43281904
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  43281945 caagccttgtcccactaagtggggtcggctacatggatcaaa 43281904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 17759543 - 17759499
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaacaac 253  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||||||    
T  17759543 aagccttatcccactaagtggggtcggctacatgaatcaaacaac 17759499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 42969968 - 42969928
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  42969968 aagccttatcccactaagtggggtcggctacatggatcaaa 42969928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 49503579 - 49503635
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatatt 264  Q
    |||||||| ||||||||||||||||| |||||||||||||||  |||| ||||||||    
T  49503579 caagccttatcccactaagtagggtcggctacatggatcaaattacgccataatatt 49503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 19676092 - 19676133
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  19676092 caagccttatcccactaagtggggtcagctacatggatcaaa 19676133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 41530043 - 41529991
Alignment:
Q  198 attacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  41530043 attacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 41529991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 48734158 - 48734198
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaa 248  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  48734158 caagccttatcccactaagtggggtcagctacatggatcaa 48734198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 7446314 - 7446275
Alignment:
Q  210 agccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  7446314 agccttttcccactaagtggagtcagctacatggatcaaa 7446275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 7454456 - 7454417
Alignment:
Q  210 agccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  7454456 agccttttcccactaagtggagtcagctacatggatcaaa 7454417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 45374488 - 45374546
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||||||||||||||| |||  |||| ||||| ||||    
T  45374488 caagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttct 45374546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 52139071 - 52139025
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacg 254  Q
    |||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  52139071 caagccttatcccactaagtggggtcggctacatggatcaaataacg 52139025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 5169103 - 5169062
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  5169103 caagccttatcccactaagtggggtcggctacatggatcaaa 5169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 12096716 - 12096757
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  12096716 caagccttatcccactaagtggggtcggctacatggatcaaa 12096757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 24778620 - 24778661
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  24778620 caagccttatcccactaagtggggtcggctacatggatcaaa 24778661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 29601163 - 29601122
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  29601163 caagccgtatcccactaagtggggtcagctacatggatcaaa 29601122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 31566172 - 31566213
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31566172 caagccttatcccactaagtggggtcggctacatggatcaaa 31566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 40273220 - 40273257
Alignment:
Q  212 ccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  40273220 ccttttcccactaagtggggtcggctacatggatcaaa 40273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 40672378 - 40672419
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| |||||||||||  ||||||||||||||||||||    
T  40672378 caagccttatcccactaagtgaggtcagctacatggatcaaa 40672419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 42510027 - 42510068
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||||||| |||||| ||||| |||||||||||||||    
T  42510027 caagccttttccctctaagtggggtcggctacatggatcaaa 42510068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 48508506 - 48508465
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  48508506 caagccttatcccactaagtggggtcggctacatggatcaaa 48508465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 52927859 - 52927900
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  52927859 caagccttatcccactaagtggggtcggctacatggatcaaa 52927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 21089677 - 21089610
Alignment:
Q  200 tacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||| || ||||| ||||    
T  21089677 tacaacaaccaagccttatcccactaagtgggggcagctacatggatcaaacaatgccataatgttct 21089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 34516 - 34574
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||| ||| ||||||||||| |||||||||||||||||||||  |||| ||||| ||||    
T  34516 caagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttct 34574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 608432 - 608391
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||| ||| ||||||||||||||||| |||||||||||||||    
T  608432 caagtcttatcccactaagtagggtcggctacatggatcaaa 608391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 8364826 - 8364769
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    ||||||||||||||||||  ||||| |||||||||||||||  |||| ||||| ||||    
T  8364826 aagccttttcccactaagcggggtcggctacatggatcaaattacgccataatgttct 8364769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 9707041 - 9707000
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  9707041 caagccttatcccactaagtggggtcggctacatggatcaaa 9707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 12890846 - 12890805
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  12890846 caagccttatcccactaagtggggtcggctacatggatcaaa 12890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28085647 - 28085606
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28085647 caagccttatcccactaagtggggtcggctacatggatcaaa 28085606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30789085 - 30789126
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| |||||||||||||| || |||||||||||||||    
T  30789085 caagccttatcccactaagtaggatcggctacatggatcaaa 30789126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 34934841 - 34934882
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  34934841 caagccttatcccactaagtggggtcggctacatggatcaaa 34934882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 15588401 - 15588459
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| |||| ||||| ||||    
T  15588401 caagccttatcccactaagtagggtcggctacatagatcaaacgacgccataatgttct 15588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 38830586 - 38830550
Alignment:
Q  212 ccttttcccactaagtagggtcagctacatggatcaa 248  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38830586 ccttttcccactaagtggggtcagctacatggatcaa 38830550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 42272746 - 42272690
Alignment:
Q  210 agccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||| ||||||||||| |||||||||||||||||||||  |||| ||||| ||||    
T  42272746 agccttatcccactaagtggggtcagctacatggatcaaatgacgccataatgttct 42272690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 13561395 - 13561438
Alignment:
Q  206 aacaagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||    
T  13561395 aacaagccttatcccactaagtggggtcggctacatggatcaaa 13561438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 28411947 - 28411900
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgc 255  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||||||||    
T  28411947 caagccttatcccactaagtggggtcggctacatgaatcaaacaacgc 28411900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 408505 - 408563
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||  |||| ||| ||||||    
T  408505 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtattct 408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 2645261 - 2645219
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaac 250  Q
    |||||||| ||||||||||||||| | ||||||||||||||||    
T  2645261 caagccttatcccactaagtagggccggctacatggatcaaac 2645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 20457044 - 20456986
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattct 266  Q
    |||||||| ||||||||||| ||||| |||||||||||||||  |||| ||||| ||||    
T  20457044 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttct 20456986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 79784 - 79747
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggat 245  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  79784 caagccttttcccactaagtggggccagctacatggat 79747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 2915507 - 2915548
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  2915507 caagccttatcccactaagtggggtcggctacatggatcaaa 2915548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 3302115 - 3302074
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  3302115 caagccttatcccactaagtggggtcggctacatggatcaaa 3302074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 4496655 - 4496614
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  4496655 caagccttatcccactaagtggggtcggctacatggatcaaa 4496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 5558412 - 5558371
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  5558412 caagccttatcccactaagtggggtcggctacatggatcaaa 5558371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 5860105 - 5860064
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||||||||| ||||||| |||||||    
T  5860105 caagccttatcccactaagtagggtcggctacatagatcaaa 5860064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 7359272 - 7359313
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||| ||| ||||||||||| |||||||||||||||||||||    
T  7359272 caagtcttgtcccactaagtggggtcagctacatggatcaaa 7359313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 11002423 - 11002476
Alignment:
Q  200 tacaacaac-aagccttttcccactaagtagggtcagctacatggatcaaacaa 252  Q
    ||||||||| ||||||| |||||||||||||||||  ||||||| |||||||||    
T  11002423 tacaacaaccaagccttatcccactaagtagggtcgactacatgaatcaaacaa 11002476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 16347391 - 16347432
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||| ||| ||||||||||||||||| |||||||||||||||    
T  16347391 caagtcttatcccactaagtagggtcggctacatggatcaaa 16347432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28985354 - 28985313
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28985354 caagccttgtcccactaagtggggtcggctacatggatcaaa 28985313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 29816653 - 29816612
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  29816653 caagccttatcccactaagtggggtcggctacatggatcaaa 29816612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 30213846 - 30213805
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  30213846 caagccttatcccactaagtggggtcggctacatggatcaaa 30213805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 38685238 - 38685197
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaa 38685197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 42576281 - 42576240
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  42576281 caagccttatcccactaagtcgggtcggctacatggatcaaa 42576240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 219480 - 219512
Alignment:
Q  217 tcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||||| |||||||||||||||||||||||    
T  219480 tcccactaaatagggtcagctacatggatcaaa 219512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 1287590 - 1287630
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaa 248  Q
    |||||||| ||||||||||| ||||| ||||||||||||||    
T  1287590 caagccttatcccactaagtggggtcggctacatggatcaa 1287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 602 - 561
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  602 caagccttatcccactaagtggggtcggctacatggatcaaa 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 959 - 1000
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||| | |||||||||||||||||||||    
T  959 caagccttatcccactaaatggggtcagctacatggatcaaa 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 28900 - 28941
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  28900 caagccttatcccactaagtggggtcggctacatggatcaaa 28941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 31739 - 31698
Alignment:
Q  208 caagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  31739 caagccttatcccactaagtggggtcggctacatggatcaaa 31698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 58238 - 58278
Alignment:
Q  209 aagccttttcccactaagtagggtcagctacatggatcaaa 249  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  58238 aagccttatcccactaagttgggtcggctacatggatcaaa 58278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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