View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_281 (Length: 270)
Name: NF10954A_low_281
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_281 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 25837214 - 25836947
Alignment:
| Q |
1 |
tcatctactgcatgctctagctgatatgaaccctctgataaaaatacgattttgaggagcatctaagaaacaaattcccatgaggcccatgagtaggacc |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25837214 |
tcatctactgcatgctctagctgatatgaaccctccgataaaaatacgattttgaggagcatctaagaaacaaattcccatgaggcccatgagtaggacc |
25837115 |
T |
|
| Q |
101 |
cctaaccaatctagaaagttgcagcccaggataccggaaataagatttcttagcaggatagaagtctatcgatgtccctgaactcgctgcatatcatatg |
200 |
Q |
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||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25837114 |
cctaatcaatctagaaagttgcagcccaggataccagaaataagatttcttagcaggatagaagtctatcgatgtccctgaactcgctgcatatcatatg |
25837015 |
T |
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| Q |
201 |
caccccaagcggcaggtccaggtacaggtgcaggtgcatactgctgaaaattctcgccaccagcccgc |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
25837014 |
caccccaagcggcaggtccaggtacaggtgcaggtgcatactgctgaaaattctcgccaccaggccgc |
25836947 |
T |
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