View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_285 (Length: 268)

Name: NF10954A_low_285
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_285
NF10954A_low_285
[»] chr3 (55 HSPs)
chr3 (15-256)||(2167481-2167721)
chr3 (13-229)||(12805781-12805997)
chr3 (12-228)||(41508358-41508574)
chr3 (12-229)||(21303245-21303462)
chr3 (12-256)||(16245593-16245837)
chr3 (38-229)||(20429728-20429919)
chr3 (12-254)||(21301909-21302153)
chr3 (38-228)||(21325358-21325548)
chr3 (23-262)||(17438287-17438527)
chr3 (159-256)||(4650364-4650460)
chr3 (157-229)||(8770144-8770216)
chr3 (157-228)||(8765242-8765313)
chr3 (38-218)||(3116321-3116499)
chr3 (162-229)||(932884-932951)
chr3 (22-120)||(22349410-22349509)
chr3 (17-114)||(28728940-28729038)
chr3 (38-118)||(8557130-8557210)
chr3 (13-120)||(12411143-12411251)
chr3 (38-117)||(4650249-4650328)
chr3 (38-120)||(19171833-19171915)
chr3 (13-118)||(31286017-31286121)
chr3 (158-229)||(8170008-8170080)
chr3 (158-202)||(8883041-8883085)
chr3 (162-229)||(12754813-12754881)
chr3 (158-229)||(16229844-16229916)
chr3 (158-229)||(19576111-19576183)
chr3 (146-229)||(19908432-19908516)
chr3 (166-229)||(19925512-19925576)
chr3 (159-219)||(21825770-21825829)
chr3 (38-121)||(932760-932843)
chr3 (159-250)||(10745040-10745130)
chr3 (22-69)||(51119293-51119340)
chr3 (159-229)||(17155931-17155999)
chr3 (160-229)||(20023443-20023512)
chr3 (15-118)||(10917912-10918016)
chr3 (157-241)||(22349533-22349612)
chr3 (162-229)||(27413787-27413855)
chr3 (13-74)||(6289895-6289957)
chr3 (17-74)||(12759383-12759441)
chr3 (163-228)||(2723727-2723790)
chr3 (38-119)||(10744920-10745001)
chr3 (14-95)||(13908250-13908331)
chr3 (14-74)||(18458469-18458530)
chr3 (157-229)||(19167533-19167605)
chr3 (17-74)||(21083307-21083364)
chr3 (38-74)||(821559-821595)
chr3 (16-119)||(18736672-18736775)
chr3 (41-121)||(19925621-19925701)
chr3 (38-229)||(8319057-8319253)
chr3 (24-74)||(10923150-10923201)
chr3 (40-74)||(8765137-8765171)
chr3 (40-74)||(8770039-8770073)
chr3 (42-120)||(8889151-8889229)
chr3 (13-74)||(11533020-11533082)
chr3 (163-229)||(18736563-18736628)
[»] chr2 (46 HSPs)
chr2 (12-256)||(25618548-25618791)
chr2 (12-253)||(29719097-29719339)
chr2 (22-256)||(27908981-27909217)
chr2 (12-229)||(15339229-15339447)
chr2 (38-229)||(32085481-32085671)
chr2 (144-246)||(17675502-17675605)
chr2 (38-212)||(45621789-45621962)
chr2 (38-227)||(31804791-31804981)
chr2 (38-246)||(17635648-17635856)
chr2 (157-256)||(30411803-30411903)
chr2 (159-229)||(28925660-28925730)
chr2 (158-228)||(29143087-29143157)
chr2 (38-256)||(17349375-17349585)
chr2 (14-192)||(11382680-11382859)
chr2 (158-256)||(26603223-26603321)
chr2 (3-124)||(9774330-9774449)
chr2 (22-229)||(17743367-17743574)
chr2 (158-257)||(25530573-25530672)
chr2 (163-229)||(25196153-25196219)
chr2 (38-120)||(30411696-30411778)
chr2 (38-189)||(20174565-20174716)
chr2 (145-224)||(25887799-25887878)
chr2 (12-124)||(25888219-25888328)
chr2 (38-121)||(25196028-25196111)
chr2 (159-250)||(45553268-45553357)
chr2 (15-120)||(12953293-12953399)
chr2 (17-125)||(19200129-19200237)
chr2 (96-231)||(29027572-29027706)
chr2 (145-228)||(9774152-9774235)
chr2 (158-221)||(17890075-17890137)
chr2 (159-250)||(23933415-23933505)
chr2 (158-257)||(25535399-25535498)
chr2 (17-118)||(8503071-8503173)
chr2 (42-120)||(25530469-25530547)
chr2 (42-104)||(25535296-25535358)
chr2 (15-104)||(45553124-45553214)
chr2 (158-222)||(25920390-25920455)
chr2 (158-228)||(17197993-17198064)
chr2 (158-229)||(24090829-24090900)
chr2 (38-104)||(28770458-28770524)
chr2 (22-104)||(28925523-28925605)
chr2 (12-69)||(20173348-20173405)
chr2 (38-119)||(25885460-25885540)
chr2 (174-221)||(12953242-12953290)
chr2 (17-104)||(25939154-25939241)
chr2 (43-119)||(27418389-27418465)
[»] chr7 (82 HSPs)
chr7 (12-229)||(3329547-3329766)
chr7 (12-259)||(2563809-2564057)
chr7 (13-228)||(17153045-17153261)
chr7 (22-256)||(5108567-5108801)
chr7 (18-219)||(7492163-7492364)
chr7 (13-192)||(7318265-7318445)
chr7 (39-228)||(1848119-1848307)
chr7 (12-229)||(9731517-9731735)
chr7 (12-256)||(4785828-4786077)
chr7 (12-256)||(6042452-6042685)
chr7 (38-221)||(8313291-8313476)
chr7 (38-221)||(3734614-3734796)
chr7 (14-190)||(10586953-10587130)
chr7 (23-229)||(8978896-8979103)
chr7 (157-229)||(13418658-13418730)
chr7 (13-118)||(16306686-16306792)
chr7 (12-124)||(4818828-4818940)
chr7 (157-229)||(17077252-17077324)
chr7 (159-229)||(8877559-8877630)
chr7 (15-228)||(6013587-6013800)
chr7 (17-118)||(10937598-10937700)
chr7 (159-229)||(20582394-20582464)
chr7 (38-118)||(5530039-5530119)
chr7 (38-253)||(9574425-9574639)
chr7 (38-229)||(39273066-39273256)
chr7 (12-221)||(2350645-2350855)
chr7 (13-119)||(31492922-31493029)
chr7 (13-118)||(9864327-9864433)
chr7 (13-256)||(16365697-16365942)
chr7 (14-118)||(10584487-10584592)
chr7 (43-120)||(11803103-11803180)
chr7 (16-104)||(23099967-23100056)
chr7 (16-118)||(22339312-22339418)
chr7 (157-232)||(4449104-4449179)
chr7 (166-229)||(8053953-8054016)
chr7 (15-231)||(16297722-16297925)
chr7 (17-118)||(18449238-18449340)
chr7 (13-118)||(18662433-18662539)
chr7 (159-229)||(18662579-18662648)
chr7 (14-74)||(15869588-15869649)
chr7 (157-229)||(11803205-11803277)
chr7 (38-229)||(18368869-18369061)
chr7 (22-120)||(11221163-11221262)
chr7 (159-229)||(7397280-7397350)
chr7 (38-120)||(13759859-13759941)
chr7 (38-119)||(10648596-10648677)
chr7 (13-124)||(1584537-1584647)
chr7 (22-104)||(8054504-8054587)
chr7 (16-118)||(9500439-9500542)
chr7 (43-118)||(18467474-18467549)
chr7 (13-74)||(5797503-5797565)
chr7 (17-118)||(9916562-9916664)
chr7 (17-118)||(9924474-9924576)
chr7 (159-221)||(14195871-14195932)
chr7 (13-225)||(1587673-1587884)
chr7 (22-120)||(8054060-8054156)
chr7 (17-118)||(21102294-21102395)
chr7 (162-229)||(16058923-16058991)
chr7 (5-104)||(17077112-17077212)
chr7 (46-118)||(18466031-18466103)
chr7 (38-118)||(18495391-18495471)
chr7 (159-218)||(19153434-19153493)
chr7 (159-218)||(20752833-20752892)
chr7 (161-229)||(22067130-22067198)
chr7 (162-209)||(4579239-4579285)
chr7 (13-178)||(4986547-4986713)
chr7 (13-178)||(4990645-4990811)
chr7 (159-246)||(9131049-9131136)
chr7 (146-253)||(17829696-17829801)
chr7 (14-119)||(1872778-1872884)
chr7 (42-104)||(4449002-4449064)
chr7 (166-228)||(6006084-6006145)
chr7 (163-213)||(8293948-8293997)
chr7 (159-213)||(10648717-10648770)
chr7 (17-74)||(15303666-15303723)
chr7 (80-118)||(16224138-16224176)
chr7 (40-120)||(13418553-13418634)
chr7 (43-120)||(17203047-17203123)
chr7 (26-74)||(21227184-21227233)
chr7 (44-104)||(3191074-3191134)
chr7 (38-118)||(4579116-4579195)
chr7 (157-229)||(13277628-13277700)
[»] chr4 (55 HSPs)
chr4 (12-241)||(19562053-19562286)
chr4 (14-259)||(40227770-40228014)
chr4 (31-222)||(17337032-17337223)
chr4 (14-210)||(12578176-12578372)
chr4 (38-229)||(17216835-17217028)
chr4 (13-229)||(17671994-17672210)
chr4 (15-256)||(24639324-24639558)
chr4 (20-219)||(15164766-15164964)
chr4 (22-229)||(13908855-13909063)
chr4 (13-227)||(17951189-17951403)
chr4 (16-201)||(5679200-5679385)
chr4 (13-224)||(17955044-17955255)
chr4 (15-192)||(14648889-14649066)
chr4 (23-224)||(19636483-19636682)
chr4 (23-119)||(7582299-7582396)
chr4 (16-224)||(13128768-13128978)
chr4 (13-119)||(9052666-9052772)
chr4 (22-120)||(19492699-19492798)
chr4 (159-250)||(25121096-25121186)
chr4 (42-119)||(11490554-11490631)
chr4 (13-192)||(20829666-20829845)
chr4 (13-120)||(21323874-21323982)
chr4 (15-120)||(13692668-13692774)
chr4 (13-118)||(19882632-19882738)
chr4 (22-118)||(20315001-20315098)
chr4 (146-202)||(16730318-16730374)
chr4 (163-255)||(17709896-17709987)
chr4 (157-246)||(19492585-19492675)
chr4 (16-119)||(8969722-8969825)
chr4 (17-104)||(11093960-11094048)
chr4 (13-68)||(12318425-12318481)
chr4 (158-229)||(17026234-17026306)
chr4 (42-229)||(19092317-19092503)
chr4 (38-192)||(22357459-22357616)
chr4 (38-118)||(25121227-25121306)
chr4 (159-250)||(26115775-26115865)
chr4 (22-189)||(19929605-19929773)
chr4 (14-118)||(23080334-23080439)
chr4 (158-229)||(25094691-25094763)
chr4 (158-229)||(25097958-25098030)
chr4 (159-229)||(7582435-7582506)
chr4 (13-67)||(9737561-9737616)
chr4 (27-90)||(10589719-10589781)
chr4 (43-74)||(12761272-12761303)
chr4 (16-118)||(19374814-19374916)
chr4 (22-104)||(22175977-22176060)
chr4 (159-209)||(9264916-9264966)
chr4 (157-222)||(13692578-13692644)
chr4 (38-104)||(13992891-13992957)
chr4 (14-74)||(11700614-11700675)
chr4 (22-74)||(17709758-17709811)
chr4 (46-118)||(11521192-11521264)
chr4 (38-74)||(15047146-15047182)
chr4 (38-74)||(15107242-15107278)
chr4 (46-118)||(22526390-22526462)
[»] chr8 (47 HSPs)
chr8 (14-258)||(29382222-29382467)
chr8 (12-256)||(24114146-24114390)
chr8 (15-229)||(34497109-34497324)
chr8 (13-232)||(14528141-14528360)
chr8 (38-256)||(13314856-13315073)
chr8 (13-229)||(25182318-25182535)
chr8 (13-175)||(30806436-30806604)
chr8 (23-116)||(17101896-17101990)
chr8 (158-228)||(18569192-18569262)
chr8 (174-256)||(26394562-26394644)
chr8 (13-103)||(5850933-5851024)
chr8 (13-178)||(6884950-6885115)
chr8 (33-262)||(21314636-21314865)
chr8 (15-120)||(24269592-24269697)
chr8 (58-222)||(13697893-13698055)
chr8 (13-192)||(19786723-19786903)
chr8 (22-118)||(24904634-24904731)
chr8 (158-218)||(23893115-23893175)
chr8 (158-229)||(16404038-16404109)
chr8 (13-118)||(17976611-17976717)
chr8 (157-229)||(17101795-17101868)
chr8 (159-228)||(30122046-30122114)
chr8 (38-118)||(14075612-14075692)
chr8 (166-246)||(24110543-24110623)
chr8 (23-121)||(18448540-18448639)
chr8 (12-74)||(24110700-24110763)
chr8 (159-253)||(7983720-7983813)
chr8 (13-118)||(30122156-30122261)
chr8 (158-246)||(24269734-24269822)
chr8 (22-74)||(26615287-26615339)
chr8 (42-121)||(25226158-25226237)
chr8 (40-74)||(24723486-24723520)
chr8 (17-74)||(26008019-26008077)
chr8 (43-101)||(27659468-27659526)
chr8 (38-88)||(30783772-30783822)
chr8 (42-119)||(2637620-2637697)
chr8 (16-92)||(14628371-14628448)
chr8 (40-121)||(17509266-17509347)
chr8 (146-229)||(14626154-14626238)
chr8 (159-223)||(17509383-17509447)
chr8 (157-227)||(27659571-27659642)
chr8 (16-117)||(15238794-15238896)
chr8 (159-228)||(18448433-18448502)
chr8 (22-87)||(17972173-17972237)
chr8 (158-226)||(19264168-19264237)
chr8 (38-99)||(31288376-31288436)
chr8 (38-118)||(24644856-24644935)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-262)||(69073-69323)
[»] chr6 (53 HSPs)
chr6 (13-259)||(27737549-27737796)
chr6 (20-223)||(9516784-9516988)
chr6 (12-265)||(12183185-12183439)
chr6 (38-230)||(22410218-22410408)
chr6 (38-241)||(23844343-23844546)
chr6 (14-226)||(4339728-4339940)
chr6 (13-253)||(8241269-8241505)
chr6 (13-118)||(9726014-9726120)
chr6 (46-192)||(28933587-28933733)
chr6 (43-232)||(17826983-17827168)
chr6 (157-218)||(25781914-25781975)
chr6 (158-256)||(14079320-14079420)
chr6 (158-241)||(24657347-24657430)
chr6 (13-231)||(15466362-15466579)
chr6 (13-228)||(21907424-21907642)
chr6 (12-104)||(23143713-23143806)
chr6 (160-228)||(22813612-22813680)
chr6 (38-229)||(23645658-23645848)
chr6 (162-228)||(27124386-27124452)
chr6 (166-227)||(17382214-17382275)
chr6 (12-100)||(17729143-17729232)
chr6 (12-237)||(21672316-21672543)
chr6 (145-229)||(24475179-24475264)
chr6 (13-117)||(7542962-7543067)
chr6 (13-192)||(11176942-11177122)
chr6 (12-237)||(21679732-21679959)
chr6 (38-118)||(17299832-17299912)
chr6 (38-102)||(19244603-19244667)
chr6 (38-229)||(5624658-5624849)
chr6 (13-226)||(22567832-22568044)
chr6 (44-221)||(9838380-9838556)
chr6 (165-256)||(14637012-14637104)
chr6 (159-229)||(22566052-22566122)
chr6 (159-228)||(20005809-20005879)
chr6 (38-124)||(21688790-21688876)
chr6 (38-120)||(27124491-27124573)
chr6 (159-228)||(9898854-9898920)
chr6 (13-117)||(25927305-25927410)
chr6 (20-99)||(20005899-20005979)
chr6 (159-226)||(20145015-20145083)
chr6 (157-209)||(21841610-21841662)
chr6 (159-226)||(22187756-22187824)
chr6 (38-124)||(18075382-18075469)
chr6 (158-229)||(22412952-22413023)
chr6 (17-103)||(28586046-28586133)
chr6 (168-229)||(1635110-1635170)
chr6 (16-72)||(14079491-14079548)
chr6 (38-71)||(21932100-21932133)
chr6 (22-61)||(20002440-20002480)
chr6 (14-73)||(20145106-20145166)
chr6 (14-73)||(22187673-22187733)
chr6 (38-74)||(22566207-22566243)
chr6 (163-219)||(24252131-24252186)
[»] scaffold0155 (1 HSPs)
scaffold0155 (38-256)||(35857-36076)
[»] chr1 (66 HSPs)
chr1 (12-256)||(17359153-17359398)
chr1 (38-258)||(12208619-12208840)
chr1 (13-231)||(9787767-9787986)
chr1 (38-256)||(13345200-13345417)
chr1 (22-247)||(15543839-15544064)
chr1 (38-256)||(9401526-9401742)
chr1 (45-216)||(51473780-51473950)
chr1 (42-229)||(29242541-29242715)
chr1 (20-229)||(17610146-17610356)
chr1 (38-229)||(22664224-22664415)
chr1 (14-192)||(23037939-23038117)
chr1 (38-228)||(31235940-31236129)
chr1 (159-229)||(16179144-16179215)
chr1 (22-221)||(14779566-14779766)
chr1 (159-228)||(18100905-18100973)
chr1 (163-245)||(16069436-16069518)
chr1 (38-120)||(25405629-25405711)
chr1 (13-229)||(33190669-33190885)
chr1 (12-120)||(21449080-21449189)
chr1 (13-120)||(16787725-16787833)
chr1 (162-229)||(21449218-21449286)
chr1 (22-120)||(18736239-18736338)
chr1 (26-120)||(21334718-21334813)
chr1 (22-120)||(21987981-21988080)
chr1 (38-192)||(24281295-24281449)
chr1 (13-118)||(3591654-3591760)
chr1 (157-226)||(18736145-18736215)
chr1 (159-229)||(22623029-22623099)
chr1 (40-121)||(21666606-21666687)
chr1 (158-226)||(23179922-23179990)
chr1 (38-118)||(24306307-24306386)
chr1 (157-228)||(727592-727663)
chr1 (146-253)||(12012680-12012785)
chr1 (162-229)||(18529082-18529149)
chr1 (130-229)||(28008216-28008313)
chr1 (158-224)||(18825781-18825847)
chr1 (157-226)||(21987887-21987957)
chr1 (13-74)||(24267827-24267889)
chr1 (13-117)||(27117720-27117825)
chr1 (13-218)||(15813057-15813261)
chr1 (158-225)||(16916840-16916908)
chr1 (161-253)||(21973071-21973164)
chr1 (158-221)||(18830607-18830670)
chr1 (159-229)||(25405521-25405591)
chr1 (159-221)||(16360010-16360071)
chr1 (40-74)||(18825675-18825709)
chr1 (165-246)||(21334591-21334672)
chr1 (163-221)||(21666507-21666565)
chr1 (15-124)||(26648966-26649075)
chr1 (159-229)||(32382899-32382968)
chr1 (15-61)||(147625-147672)
chr1 (14-116)||(12012803-12012906)
chr1 (13-99)||(44795361-44795447)
chr1 (159-229)||(15807911-15807980)
chr1 (12-124)||(15813519-15813633)
chr1 (159-229)||(17121391-17121460)
chr1 (13-118)||(17837509-17837615)
chr1 (192-253)||(15813409-15813470)
chr1 (16-104)||(21847629-21847717)
chr1 (14-74)||(22620255-22620316)
chr1 (40-121)||(22622910-22622991)
chr1 (38-119)||(24214562-24214643)
chr1 (158-229)||(14781756-14781828)
chr1 (40-92)||(16069578-16069630)
chr1 (42-121)||(16916931-16917011)
chr1 (40-104)||(18830501-18830565)
[»] scaffold0102 (1 HSPs)
scaffold0102 (42-228)||(35559-35745)
[»] chr5 (44 HSPs)
chr5 (38-256)||(24245407-24245625)
chr5 (146-229)||(20744560-20744643)
chr5 (38-245)||(17431901-17432107)
chr5 (13-192)||(22755513-22755694)
chr5 (38-229)||(24140460-24140644)
chr5 (17-104)||(17185459-17185547)
chr5 (22-120)||(15375881-15375980)
chr5 (15-104)||(25550519-25550609)
chr5 (162-229)||(20858814-20858881)
chr5 (13-249)||(18208121-18208355)
chr5 (46-253)||(15690803-15691008)
chr5 (159-228)||(24260655-24260723)
chr5 (41-178)||(25402278-25402415)
chr5 (173-249)||(34128788-34128864)
chr5 (161-228)||(28664902-28664969)
chr5 (159-229)||(20315320-20315390)
chr5 (159-229)||(24265366-24265435)
chr5 (159-229)||(24341997-24342066)
chr5 (159-228)||(36175272-36175340)
chr5 (38-194)||(19004153-19004307)
chr5 (158-229)||(20563982-20564054)
chr5 (159-249)||(15375765-15375856)
chr5 (38-121)||(20315428-20315511)
chr5 (42-104)||(17315115-17315177)
chr5 (13-192)||(18937740-18937919)
chr5 (17-74)||(23014654-23014711)
chr5 (37-118)||(24852173-24852254)
chr5 (13-104)||(15469928-15470020)
chr5 (158-229)||(16523693-16523765)
chr5 (13-68)||(19086230-19086286)
chr5 (40-104)||(23388853-23388917)
chr5 (163-250)||(26121007-26121093)
chr5 (13-120)||(36175126-36175233)
chr5 (13-119)||(17171553-17171660)
chr5 (81-120)||(26120925-26120964)
chr5 (38-121)||(39434480-39434563)
chr5 (186-229)||(39434620-39434663)
chr5 (162-228)||(17315004-17315070)
chr5 (167-229)||(26835796-26835857)
chr5 (38-189)||(34487656-34487807)
chr5 (12-104)||(19051540-19051632)
chr5 (40-121)||(34128656-34128737)
chr5 (16-119)||(24266955-24267058)
chr5 (16-119)||(24343586-24343689)
[»] scaffold0035 (1 HSPs)
scaffold0035 (22-229)||(69914-70121)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-228)||(39576-39792)
[»] scaffold0638 (1 HSPs)
scaffold0638 (23-228)||(713-919)
[»] scaffold0671 (1 HSPs)
scaffold0671 (158-229)||(568-639)
[»] scaffold0650 (1 HSPs)
scaffold0650 (16-118)||(6282-6385)
[»] scaffold0062 (1 HSPs)
scaffold0062 (42-192)||(43154-43304)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-192)||(168226-168403)
[»] scaffold0111 (1 HSPs)
scaffold0111 (146-229)||(3759-3843)
[»] scaffold0056 (3 HSPs)
scaffold0056 (158-229)||(25112-25183)
scaffold0056 (158-229)||(21402-21473)
scaffold0056 (43-104)||(21299-21360)
[»] scaffold0008 (3 HSPs)
scaffold0008 (13-192)||(54852-55033)
scaffold0008 (41-104)||(234362-234425)
scaffold0008 (26-74)||(48235-48284)
[»] scaffold0622 (1 HSPs)
scaffold0622 (15-229)||(722-936)
[»] scaffold0054 (1 HSPs)
scaffold0054 (159-222)||(72148-72212)
[»] scaffold0019 (2 HSPs)
scaffold0019 (46-118)||(11266-11338)
scaffold0019 (21-91)||(181734-181804)
[»] scaffold0136 (1 HSPs)
scaffold0136 (13-74)||(15510-15572)
[»] scaffold0043 (2 HSPs)
scaffold0043 (16-119)||(89854-89957)
scaffold0043 (163-229)||(89744-89809)
[»] scaffold1869 (1 HSPs)
scaffold1869 (22-104)||(404-487)
[»] scaffold0016 (1 HSPs)
scaffold0016 (40-104)||(3551-3615)
[»] scaffold0263 (1 HSPs)
scaffold0263 (159-229)||(15785-15855)
[»] scaffold0838 (1 HSPs)
scaffold0838 (22-119)||(2371-2469)
[»] scaffold0832 (1 HSPs)
scaffold0832 (22-119)||(2402-2500)
[»] scaffold0042 (1 HSPs)
scaffold0042 (38-120)||(29925-30006)
[»] scaffold0672 (1 HSPs)
scaffold0672 (38-91)||(1752-1805)
[»] scaffold0957 (1 HSPs)
scaffold0957 (38-106)||(3171-3238)
[»] scaffold0238 (1 HSPs)
scaffold0238 (13-73)||(19103-19163)
[»] scaffold0034 (1 HSPs)
scaffold0034 (158-221)||(76541-76605)


Alignment Details
Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 2167721 - 2167481
Alignment:
Q  15 gattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||  || | | ||||||||| |||||||||||  ||||||||    
T  2167721 gattagacaagtgtaccaaatcgttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattactt 2167622  T
Q  115 atttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaa 214  Q
    |||||||||||    |||||||||| ||| ||| |||||||   ||||||||||||||||||||||||||| |||| |||||| ||||| |||  |||||    
T  2167621 atttttagtttgactataaaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaag-ttacctgttttggttgtggaaaa 2167523  T
Q  215 gtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    ||||| || |||||| ||  ||||||| ||||||||||||||    
T  2167522 gtaagaagtggttaggattcttcgaatccccctatttatatt 2167481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 12805997 - 12805781
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||  ||  ||||||||||||||||||||||||||| |||    
T  12805997 cggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgtta 12805898  T
Q  112 cttatttttagt-ttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| |||   ||| |||||||||| ||  ||||||||||| | ||||||||||||||||||||||||| || ||  ||||||  |||| ||||||    
T  12805897 cttattttaagtcgacgttataaaataaaagattaaagggttaga-gattgcaatttttatctgtttgcaacagag-aaaattacctgatttggttgcag 12805800  T
Q  211 aaaagtaagcagcggttag 229  Q
    |||||||||||| ||||||    
T  12805799 aaaagtaagcaggggttag 12805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 41508358 - 41508574
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||| || | ||||||||||||||||| ||| | ||||||||| || | |||||||||||  |||||||||||||||||    
T  41508358 gcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcatt 41508457  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    ||||||||||| |||   ||||||||||| |||  ||||||||||   ||||||||| ||||||||||||||| |||||| |||| | ||||| ||||||    
T  41508458 acttatttttaatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaag-ttacatgttttggttgcag 41508556  T
Q  211 aaaagtaagcagcggtta 228  Q
    |||||||| |||||||||    
T  41508557 aaaagtaaccagcggtta 41508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 21303462 - 21303245
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||  ||||||||||||||| || ||||| ||||||| ||||||||| ||||||||| |  || ||||||| |||||||||||||||||| | ||    
T  21303462 gcggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgtt 21303363  T
Q  111 acttatttttagtttcgtg-ataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    ||||||||| ||||   |  |||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||| |||| | ||||| |||||    
T  21303362 acttattttaagttgactatataaaataaaagagtaaagggttaga-gattgcaatttttatctgtttgcaacagagcaag-ttacttgttttggttgca 21303265  T
Q  210 gaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||    
T  21303264 gaaaagtaagcagcggttag 21303245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 256
Target Start/End: Complemental strand, 16245837 - 16245593
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    |||||||||||||||||| ||| || || ||||||||||||||||||||||| |||||| ||||  ||  |||| || |||| |||||||||||  | ||    
T  16245837 gcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgtt 16245738  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgca 209  Q
    ||||||||| |||||    |||||||||| |||  ||||||||||   ||||||||||||||| ||||||||| |||||||| |||| |||| | |||||    
T  16245737 acttatttt-agtttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagtt-acctgtttttggttgca 16245640  T
Q  210 gaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||||    
T  16245639 gaaaagtaagcagcggttagaattctccgaatccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 20429728 - 20429919
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta-gtttcgtgataaaat 136  Q
    ||||||||||||||| ||||||||| |||||||||||   |  ||||||| ||||||||| |||||| || ||||||||||||| ||||   |||| |||    
T  20429728 ttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaagtttgacgatataat 20429827  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||| ||| || |||||||| | ||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||| ||| ||||||    
T  20429828 aaaagagtaa-gggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatctattttggttgcagaaaagtaatcagtggttag 20429919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 21301909 - 21302153
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| ||||||||||| |  ||    
T  21301909 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagtt 21302008  T
Q  111 acttatttt--tagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacc-tattttgcttg 207  Q
    |||||||||  ||  ||   |||| ||||||  ||| | ||||||||  |||| ||||||||||||||||||||| |||||||||||| | ||||| |||    
T  21302009 acttatttttgtaaattgacgatataataaa--agatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgattg 21302106  T
Q  208 cagaaaagtaagcagcggttagaatatttcgaatacccctatttata 254  Q
    ||||||| ||| |||||||||| ||  ||||||| ||||| ||||||    
T  21302107 cagaaaaataaacagcggttaggattcttcgaatccccctgtttata 21302153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 228
Target Start/End: Original strand, 21325358 - 21325548
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    ||||||||||||||| ||||||||| |||||||||||  || | ||||||||||| |||||||||||||  ||||||||||| ||||  ||  |||||||    
T  21325358 ttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttattttaagttaacgatataaaat 21325457  T
Q  137 aaacgag-aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||| |||   |||||||||| | ||||||||||||||| ||||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||    
T  21325458 aaaagagttgaagggttaga-gattgcaatttttatctatttgcaacagagcaag-ttacctaatttggttgcagaaaagtaagtagcggtta 21325548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 17438527 - 17438287
Alignment:
Q  23 aagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt-- 120  Q
    ||||||| |||||| ||||||||| ||||| ||||||||| |||||| ||||  ||  |||||||||||| |||||||||||  | ||||||||||||      
T  17438527 aagtgtaccaaatcgttaccaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgt 17438428  T
Q  121 -agtttcgtgataaaataaacgagaaaagggttagacgg-ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaa 218  Q
     |||||   |||| ||||||     ||||| |||||  | ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  17438427 aagtttgacgatataataaat----aaaggtttagaaagcttgcaatttttatctgtttgcaacagagcaattttacctgttttggttgcagaaaagtaa 17438332  T
Q  219 gcagcggttagaatatttcgaataccc-ctatttatattattcga 262  Q
    ||| ||||||| ||  ||||||| ||| ||||||||||| |||||    
T  17438331 gcaacggttaggattcttcgaatcccctctatttatattgttcga 17438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 4650364 - 4650460
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||| ||||||| ||  ||||||| ||||||| ||||||    
T  4650364 ttgcaatttttatctgtttgcaacggagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaat-cccctatgtatatt 4650460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 8770144 - 8770216
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  8770144 ggttgcaatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttag 8770216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 8765242 - 8765313
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||    
T  8765242 ggttgcaatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagtta 8765313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 3116499 - 3116321
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    |||||||||||||||||||||||| | |||| |||||  ||| |||||||||||| |||||||||||  | ||||||||||| || ||   |||||||||    
T  3116499 ttaccaagtaataaagtgataagtga-gtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttattttaag-ttgacgataaaata 3116402  T
Q  138 aacgagaaaagggtt-agacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaa 218  Q
    || |||| ||||||| |||   ||||||||||||||||||||||||| ||||||  |||||  ||||| ||||||||||||||    
T  3116401 aa-gagataagggttaagagatttgcaatttttatctgtttgcaacagagcaag-atacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 932884 - 932951
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||| ||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttgttttggttgcagaaaagtaagcagcggttag 932951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 22349410 - 22349509
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||| ||||||||||||||||| |||||||||||  || | ||||||||||| |||||||||||  ||||||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 28728940 - 28729038
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||| ||||||| |||||| ||| | ||||||||||||||||||||| |||||||||||  || |||||||||||||| |||||||||| || ||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 8557210 - 8557130
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||| ||||||||||||||||||| |||||||||||  ||  ||||||||||||||  ||||||||||| ||||||||||    
T  8557210 ttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 12411143 - 12411251
Alignment:
Q  13 cggattagacaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||| || |||||||| ||||||| |||||||||||||||||||| |||| |||||||||||  ||  |||||||||||| | ||||||||||   |||    
T  12411143 cggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggtta 12411242  T
Q  112 cttattttt 120  Q
    |||||||||    
T  12411243 cttattttt 12411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 4650249 - 4650328
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatt 117  Q
    |||||||||||||||||||| ||||||||||||||||  ||| ||||||| ||||  |||||||||| || |||||||||    
T  4650249 ttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 19171915 - 19171833
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    ||||||||||||||||||||||| | || ||| |||   ||  |||||||||||| |||||||||||||||||||||||||||    
T  19171915 ttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttattttt 19171833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 31286121 - 31286017
Alignment:
Q  13 cggattagacaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||| || | |||||||||  ||| |||||| ||||| |||||||||||| | |||    
T  31286121 cggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaatttccgtta 31286024  T
Q  112 cttattt 118  Q
    |||||||    
T  31286023 cttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 8170008 - 8170080
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||| ||||||||||||||||||||||||| | |||||||  ||||| ||||||||||||| |||||||||||    
T  8170008 gttgtaatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttag 8170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 8883085 - 8883041
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctatttt 202  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  8883085 gttgcaatttttatctgtttgcaacatagcgagtttacctatttt 8883041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 12754881 - 12754813
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||| ||||||||||| ||| |||||||||  ||||| |||||||||||||||||||||||||    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttag 12754813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 16229916 - 16229844
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||| | |||||||  ||||| ||||| |||||||||||||||||||    
T  16229916 gttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttag 16229844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 19576183 - 19576111
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||||||||||    
T  19576183 gttgcaatttttatctgtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttag 19576111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 19908432 - 19908516
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||| | | ||| ||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||    
T  19908432 aagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagtaagcagcagttag 19908516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 19925576 - 19925512
Alignment:
Q  166 ttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttag 229  Q
    |||||| ||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||    
T  19925576 ttttatatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttag 19925512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 21825829 - 21825770
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaag 219  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||    
T  21825829 ttgcaatttttatctgtttgtaacatagcaag-ttaccttttttggttgcagaaaagtaag 21825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 932760 - 932843
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    |||| |||||||||| |||||| || |||||||||||  ||||||||||| |||| |||||| ||||  |||||||||||||||    
T  932760 ttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttattttta 932843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 10745040 - 10745130
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatt 250  Q
    ||||||||||||||| ||||||||| |||||| |||||| ||||| ||||||||| ||||||| | |||| ||  |||||||| ||||||||    
T  10745040 ttgcaatttttatctatttgcaacagagcaag-ttacctgttttggttgcagaaatgtaagcaacagttaaaaattttcgaatccccctatt 10745130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 51119340 - 51119293
Alignment:
Q  22 caagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatc 69  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  51119340 caagtgtatcaaatcgttaccaaataataaagtgataagtaaagtatc 51119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 17155931 - 17155999
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||| |||| ||||    
T  17155931 ttgcaatttttatctgtttgcaacagagcaag-ttaccta-tttggttgcagaaaagtaagtagcgattag 17155999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 20023512 - 20023443
Alignment:
Q  160 tgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||| ||| | ||||||  ||||| ||||||||||||||| ||| |||||    
T  20023512 tgcaatttttatctgtttgcaacagagcgaatttaccagttttggttgcagaaaagtaagtagcagttag 20023443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 10917912 - 10918016
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| |||||| || ||||| ||||||||||||||||| |||||||||||  ||  |||||| ||||| || ||||| || |||||||     
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacc 10918011  T
Q  114 tattt 118  Q
    |||||    
T  10918012 tattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 22349533 - 22349612
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaat 241  Q
    ||||||||||||||||||||||||     |||| |||| |||||||  |||||||||| ||| ||||||||||||| ||||||||    
T  22349533 ggttgcaatttttatctgtttgca-----gcaaatttatctattttagttgcagaaaaataaacagcggttagaatttttcgaat 22349612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 27413855 - 27413787
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||| ||||| ||| | ||||||| |||| | |||||||||||||||||||||||||    
T  27413855 caatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttag 27413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 6289895 - 6289957
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||| ||| ||||||||||| || ||||||||||||||||||||||| |||||| ||||    
T  6289895 cggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatc 6289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 12759383 - 12759441
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||| |||||  || ||||||||||||||||||||||| |||||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatc 12759441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 2723790 - 2723727
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||||||||| |||||| ||||||  |||| ||||| ||||||||||||||||||    
T  2723790 aatttttatctgtttgcaacaaagcaag-ttacct-gtttggttgcaaaaaagtaagcagcggtta 2723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 10744920 - 10745001
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    ||||||||||||||||||||||||| |||||||| ||   || |||||||||||| || |||||| |  ||||| |||||||    
T  10744920 ttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaattatttt 10745001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 13908331 - 13908250
Alignment:
Q  14 ggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatc 95  Q
    |||||||  ||||||| |||||| || |||||||||||||||||||||| |||||| ||||   || |||| ||||||||||    
T  13908331 ggattaggaaagtgtaccaaatcttttccaagtaataaagtgataagtagagtatcatatccatagggattatcgtttcatc 13908250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 18458530 - 18458469
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||||||||||| |||||  || | ||||||||||||||||||||| |||||||||||    
T  18458530 ggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatc 18458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 19167533 - 19167605
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| | ||| | |||||||| ||||| |||||| |||||||||| |||||||    
T  19167533 ggttgcaatttttatctgtttgcaataaagcgaatttacctatttttggttgcag-aaagtaagcaacggttag 19167605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21083307 - 21083364
Alignment:
Q  17 ttagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||| |||||||| |||||| ||||||| ||||||| ||| |||||||||||||||||    
T  21083307 ttaggcaagtgtaacaaatcgttaccaaataataaaatgacaagtaaagtatcgtatc 21083364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 821595 - 821559
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||| |||||||||||    
T  821595 ttaccaagtaataaagtgataagtagagtatcgtatc 821559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 18736775 - 18736672
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||||||||||||| |||||| || ||||||||||||||| ||||||| | |||||||||  |||   |||||||||| || |||||| | || ||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttactt 18736677  T
Q  115 atttt 119  Q
    |||||    
T  18736676 atttt 18736672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 19925701 - 19925621
Alignment:
Q  41 ccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||| |||||| ||| |||||||||||  ||  ||||||| |||| |||||| |||| || |||||||||||||    
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttattttta 19925621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 8319057 - 8319253
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttc-gtgataaaat 136  Q
    |||||||||||| |||||||||||| | ||| |||||  ||| |||| ||||||| | |||||||||    ||||||||||| ||||   |  |||||||    
T  8319057 ttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttacttattttaagttgatgatataaaat 8319156  T
Q  137 aaacgagaaaagggttagacggttgcaatttttat------ctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    | | |||| ||| |||||| | ||||||||||| |      ||||| |||||||||||| || |||||||||| ||||| |||||||||||| ||||||    
T  8319157 acaagagataagagttaga-gattgcaattttttttttcttctgttagcaacatagcaaatt-acctattttggttgcataaaagtaagcagtggttag 8319253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10923150 - 10923201
Alignment:
Q  24 agtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||| ||||||||| |||||||||||||||||||| || |||||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatc 10923201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 8765137 - 8765171
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||| |||||||||||||||||||||||||||||    
T  8765137 accaattaataaagtgataagtaaagtatcgtatc 8765171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 8770039 - 8770073
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||||||||||||||||||||||||| ||||    
T  8770039 accaagtaataaagtgataagtaaagtatcatatc 8770073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 8889229 - 8889151
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    ||||||||||||||||||||| ||||| |||||  ||| ||||||| |||| | | |||||||  | ||||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattttt 8889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11533082 - 11533020
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||| ||||||||| |||| |||| ||||| ||||||||||||||||| |||| ||||||    
T  11533082 cggattaaacaagtgtaccaaaacatttaccaaataataaagtgataagtagagtaccgtatc 11533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 18736628 - 18736563
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||| ||||||||||  | |||||| |||| ||||| |||||||||| ||||||||||||||    
T  18736628 aatttttatttgtttgcaaccgaacaagtt-acctgttttggttgcagaaaaataagcagcggttag 18736563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 25618548 - 25618791
Alignment:
Q  12 gcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||| |||||| ||||  ||  |||||||||||| || |||||||| || | |    
T  25618548 gcggattaggcaagcgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaa 25618647  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcaga 211  Q
    |||||||||||||    |||| |||||| |||  ||  ||||||   ||||||||||||||||||||||||| || |||||||||| ||||| |||||||    
T  25618648 cttatttttagttgac-gatataataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctgttttggttgcaga 25618746  T
Q  212 aaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||||||||| ||||  ||||||| |||| |||||||||    
T  25618747 aaagtaagcagcggttcgaattcttcgaatccccccatttatatt 25618791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 29719339 - 29719097
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||| || ||||||||||||||||||||||| | |||||||||  ||  |||||||||||| | ||||||||| || ||    
T  29719339 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgtt 29719240  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctat-tttgcttgca 209  Q
    |||||||||||||||   | || ||||||  | | ||||||||||  |||||||||||||| ||| ||||||| ||||||||||||| | |||| |||||    
T  29719239 acttatttttagtttgacggtataataaa--atataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgca 29719142  T
Q  210 gaaaagtaagcagcggttagaatatttcgaataccc-ctatttat 253  Q
    |||||||||||||| ||||| ||  ||||||| ||| ||||||||    
T  29719141 gaaaagtaagcagcagttaggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 27909217 - 27908981
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  | || | |||||||||||||||||  | ||||||||||||    
T  27909217 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattttt 27909118  T
Q  121 ---agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagta 217  Q
       |||||   ||||   |||| |  ||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||    
T  27909117 gtaagtttgacgata---taaaagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaatta 27909021  T
Q  218 agcagcggttagaatatttcgaat-acccctatttatatt 256  Q
    |||||||||||| ||  |||||||  ||||||||||||||    
T  27909020 agcagcggttaggattcttcgaatcccccctatttatatt 27908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 15339229 - 15339447
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| ||||| |||||| ||||  ||  |||||||||||| ||||||||||| || ||    
T  15339229 gcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgtt 15339328  T
Q  111 actta-tttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgc 208  Q
    ||||| ||| ||  ||   |||| ||||||  ||| ||||||||||  |||||||||||||| ||||||||||| |||||||||| ||  ||||  ||||    
T  15339329 acttactttgtaagttaaggatataataaa--agataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttgc 15339426  T
Q  209 agaaaagtaagcagcggttag 229  Q
    ||||||||||||||| |||||    
T  15339427 agaaaagtaagcagcagttag 15339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 32085481 - 32085671
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||| ||||  ||  |||||||||||| || |||||  | |  ||||||||||| ||||  ||  |||||||    
T  32085481 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttacttattttaagttgacgatataaaat 32085580  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||| |||  ||| |||||| | ||||||||||||||||||||||||| |||||| ||||||  |||| |||||||||||||||||||||||||    
T  32085581 aaaagagttaagagttaga-gattgcaatttttatctgtttgcaacagagcaag-ttacctggtttggttgcagaaaagtaagcagcggttag 32085671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 246
Target Start/End: Complemental strand, 17675605 - 17675502
Alignment:
Q  144 aaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaata 242  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||| ||||||||||||| ||||||||     
T  17675605 aaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaaataaacagcggttagaatttttcgaatt 17675506  T
Q  243 cccc 246  Q
    ||||    
T  17675505 cccc 17675502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 45621962 - 45621789
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||||||| ||||| |||||||||||  ||  |||||||||||| ||||||||||| |  |||||||||||| |   |   ||||||||    
T  45621962 ttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttttg-aacaaaataaaata 45621864  T
Q  138 aacga-gaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaa 212  Q
    || || || |||||||||| | ||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  45621863 aaagatgataagggttaga-gtttgtaatttttatctgtttgcaacatagcaagtttacttgttttgattgcagaa 45621789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 31804981 - 31804791
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt--agtttcgtgataaaa 135  Q
    ||||||| ||||||||||||||||| ||||| |||||  ||||||||| |||||| ||||| |||| ||  ||||||||||||  |  ||   |||| ||    
T  31804981 ttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaagttgacgatataa 31804882  T
Q  136 taaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggtt 227  Q
    ||||  ||| ||||||||||  |||||||||||||| ||||||||| | ||||| |||||||  ||||| |||||||||||||||||||||||    
T  31804881 taaa--agataagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 246
Target Start/End: Complemental strand, 17635856 - 17635648
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    |||||||||||||||| || ||||| || ||| ||||  |||||||||||||||| || ||| || |  | |||||||||||| ||    |||  |  ||    
T  17635856 ttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttattttt-gtaagttgacgatgta 17635758  T
Q  138 aacgagaaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatattt 236  Q
    || || ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| || ||| |||| |||||||| |||    
T  17635757 aaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagataaataaacagcagttagaattttt 17635658  T
Q  237 cgaatacccc 246  Q
    ||||| ||||    
T  17635657 cgaattcccc 17635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 30411803 - 30411903
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatat 255  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||| ||||||||||||||||||||||||| || |||||||| ||||| || ||||    
T  30411803 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatat 30411902  T
Q  256 t 256  Q
    |    
T  30411903 t 30411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 28925660 - 28925730
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  28925660 ttgcaatttttatttgtttgcaacatagcaagtttacctgttttggttgcagaaaagtaagcagaggttag 28925730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 29143087 - 29143157
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||    
T  29143087 gttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgtagaaaagtaaacagcggtta 29143157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 256
Target Start/End: Original strand, 17349375 - 17349585
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt-tagtttcgtgataaaat 136  Q
    |||||||||||||||||| |||||| |||||||||||  || ||||||||||||| |||||||| || || ||||||||||| ||  ||   |||| |||    
T  17349375 ttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttgtaagttgacgatataat 17349473  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaatatt 235  Q
    |||  ||| |||||||        ||||||||||||||||||||||| ||||||||||| |  ||||| ||||| |||||||||||||||| |||||  |    
T  17349474 aaa--agataagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtcagaattct 17349563  T
Q  236 tcgaataccc-ctatttatatt 256  Q
    |||||| ||| |||||||||||    
T  17349564 tcgaatcccctctatttatatt 17349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 11382859 - 11382680
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    |||||| |||||||||||||||| || ||||  ||||||||||||||||| |||||| ||||  ||   |||||  ||||||||||| |||| || ||||    
T  11382859 ggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttac 11382760  T
Q  113 ttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||||||||||   ||||| ||||| |||  ||  ||||||   |||||| |||||||||||||||||| ||||||||    
T  11382759 ttatttttagtttgacgataagataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaagtt 11382680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 26603321 - 26603223
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||||||||||||||||||| |||| |||||||| |||| | ||| ||||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  26603321 gttgcaatttttatctgtttgcaacagagca-gtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatccccctatttatatt 26603223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 9774449 - 9774330
Alignment:
Q  3 agtgatgtagcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaa 102  Q
    |||||||||||||||||| ||| |||||| || | |||||||| |||||||||||  ||| |||||||||||  ||  |||||||||||  ||||| |||    
T  9774449 agtgatgtagcggattaggcaaatgtatcgaaccgttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaa 9774352  T
Q  103 tttgcattacttatttttagtt 124  Q
    ||||| ||||||||||||||||    
T  9774351 tttgcgttacttatttttagtt 9774330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 17743574 - 17743367
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  |||| ||||||| ||||||||||| |  ||||||||||||    
T  17743574 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattttt 17743475  T
Q  121 ---agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagt 216  Q
       |||||   |||   |||||  ||  ||||||||||  |||||||||||||||| ||||||||  |||||||||||||  ||||| ||| |||||||     
T  17743474 gcaagtttaacgat---ataaa--agttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaaaagg 17743380  T
Q  217 aagcagcggttag 229  Q
    |||| ||||||||    
T  17743379 aagccgcggttag 17743367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25530573 - 25530672
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatta 257  Q
    |||||||||||||||||||||||||| ||| | ||||||| ||||| ||||| || |||||||||||||||| ||  ||||||| ||||| | |||||||    
T  25530573 gttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcaaaatagtaagcagcggttaggattcttcgaatccccctctgtatatta 25530672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 25196153 - 25196219
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||    
T  25196153 aatttttatatgtttgcaacatagcaagtttacctgttttggttgcaaaaaagtaagcagtggttag 25196219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 30411696 - 30411778
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||| |||||||||||||||||| |||||||||||  ||| ||||||| |||| ||| |||||||||| ||||||||||||    
T  30411696 ttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattttt 30411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 189
Target Start/End: Complemental strand, 20174716 - 20174565
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||| | ||  ||  |||||||||||| |||||||||||    ||||||||||| ||||   |  |||||||    
T  20174716 ttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttacttattttaagttgatgatataaaat 20174617  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaa 189  Q
    |||  ||  |||||||||| | ||| ||||||||||||||||||||| |||||    
T  20174616 aaaatagttaagggttaga-gattggaatttttatctgtttgcaacagagcaa 20174565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 25887878 - 25887799
Alignment:
Q  145 aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcg 224  Q
    |||||||||||   ||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| |||||    
T  25887878 aaagggttagagatttgcaatttttatctgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcg 25887799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 25888328 - 25888219
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||  || ||||||||||||||||||||||| |||||||||||  ||  |||||||||||    ||||||||| || ||    
T  25888328 gcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgtt 25888233  T
Q  111 acttatttttagtt 124  Q
    ||||||||| ||||    
T  25888232 acttattttaagtt 25888219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 25196028 - 25196111
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||||||||||||| |||||| ||||  ||| | ||||| |||| |||||||||||  | |||||||||||||    
T  25196028 ttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattttta 25196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 45553268 - 45553357
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatt 250  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||||| || || |||||||||||| ||  || |||| ||||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaag-ttacctgttttggttgcag-aacgttagcagcggttaggattctttgaatccccctatt 45553357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 12953399 - 12953293
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| ||||||||| | ||||||||||||| ||||||| ||||| || ||  ||  |||||||||||| || |||||||| || |||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttact 12953300  T
Q  114 tattttt 120  Q
    |||||||    
T  12953299 tattttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 19200237 - 19200129
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| |||||||| |||||| || ||||| |||||| ||||||||| | ||||||||||  ||  |||||||||||||||||||||| |  |||||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagtga-gtatcgtatccacaaggattgtcgtttcatccaaacaactcacattactta 19200139  T
Q  116 tttttagttt 125  Q
    |||| |||||    
T  19200138 ttttaagttt 19200129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 29027572 - 29027706
Alignment:
Q  96 caaacaatttgcattacttatttttagtttc-gtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagttta 194  Q
    |||| ||||||| ||||||||||| |||| | |  || ||||||| |||| |||||||||| | ||||||||||||||||||||||| | |||||| | |    
T  29027572 caaataatttgcgttacttattttaagttgccgatattaaataaaagagataagggttaga-gattgcaatttttatctgtttgcaagagagcaag-tga 29027669  T
Q  195 cctattttgcttgcagaaaagtaagcagcggttagaa 231  Q
    |||  |||| ||||||||||| || || |||||||||    
T  29027670 cctgatttggttgcagaaaagaaaacaacggttagaa 29027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 9774235 - 9774152
Alignment:
Q  145 aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||   |||||||| |||| ||||| ||||| |||||| ||| |||||||| ||| ||||||||||| ||||||||    
T  9774235 aaagggttagagatttgcaattgttatatgtttacaacagagcaagcttatctattttggttgaagaaaagtaagaagcggtta 9774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 17890075 - 17890137
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    |||||||||||||| ||||||||||| |||||| |||||| ||||| ||||||||| |||||||    
T  17890075 gttgcaatttttatatgtttgcaacagagcaag-ttacctgttttggttgcagaaatgtaagca 17890137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 23933505 - 23933415
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatt 250  Q
    ||||||||||||||||||||||||| |||||| |||| |  |||| || || ||||||||||||||||||| ||  || |||| ||||||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaag-ttacttggtttggtttcacaaaagtaagcagcggttaggattctttgaatccccctatt 23933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25535399 - 25535498
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatta 257  Q
    |||||||||||||||| |||||||||  |  | ||||||| ||||| ||||| ||||||||||||||||| | ||  ||||||| ||||| | |||||||    
T  25535399 gttgcaatttttatctatttgcaacagcgtgaatttacctgttttggttgcaaaaaagtaagcagcggttgggattcttcgaatccccctctatatatta 25535498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 8503173 - 8503071
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| |||||||| |||||| || |||||||||||| |||||||||| || ||| ||||  ||  ||||||| ||||| ||||||||||||| ||||| |    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaa 8503074  T
Q  116 ttt 118  Q
    |||    
T  8503073 ttt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 25530469 - 25530547
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    ||||||||||||||||||||| |||||||||||  ||| ||||||| |||| |||  | ||||  ||||||||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttattttt 25530547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 25535296 - 25535358
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||||||||||||| |||||||||||  ||| ||||||| |||| ||| |||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaatt 25535358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 45553124 - 45553214
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||| |||||||| |||||| || | ||||||||||||||||||||||| ||||||||   ||| |||||||||||  ||||| |||||    
T  45553124 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaatt 45553214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 25920390 - 25920455
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcag 222  Q
    |||||||||||||||||||||||||| ||| | |||||||  ||||| |||||||||||| |||||    
T  25920390 gttgcaatttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcag 25920455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 17197993 - 17198064
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggtta 228  Q
    ||||||| ||||||| ||||||| || ||| | || ||||||||| | ||||||||||||||||||||||||    
T  17197993 gttgcaacttttatcagtttgcagcagagcgaattcacctatttttggttgcagaaaagtaagcagcggtta 17198064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 24090900 - 24090829
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||| | ||||||| |  || | ||||||| ||||| |||||||||||||||||| ||||||    
T  24090900 gttgcaatttttatatttttgcaaaactgcgaatttacctgttttggttgcagaaaagtaagcagtggttag 24090829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 28770524 - 28770458
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||| ||||||||||||||||| |||||||||||   ||  | |||| ||||||||||||||||    
T  28770524 ttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaatt 28770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 28925523 - 28925605
Alignment:
Q  22 caagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||  ||||| ||||||||||||||||||||||||| ||  | |||||  |   |||||||||||| |||||||||||    
T  28925523 caagtgtactaaatcgttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaatt 28925605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 20173405 - 20173348
Alignment:
Q  12 gcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatc 69  Q
    |||||||||  ||||||| |||||| ||||||||| ||||||||||||| | ||||||    
T  20173405 gcggattaggaaagtgtaccaaatcgttaccaagttataaagtgataagcagagtatc 20173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 25885540 - 25885460
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    |||| ||||||||| |||||||| | |||||||||||  ||   ||||||||||| |||||||||||||  |||||||||||    
T  25885540 ttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 12953290 - 12953242
Alignment:
Q  174 gtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagca 221  Q
    |||||||||||||||||||||| |  ||||| |||||||||||||||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagca 12953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 25939154 - 25939241
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||| |||||| || |||||| | |||||||||||||| ||||||||||||||||||   |  |||| |||||||| ||||||||||    
T  25939154 ttagactagtgtaccacatcatttatcaagtaataaagtg-taagtaaagtatcgtatccataaggattttcgtttcaaccaaacaatt 25939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 27418389 - 27418465
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    |||||||||||||||||||| |||||| ||||  ||  |||| || ||||| |||||||||| |  |||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 3329766 - 3329547
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    |||||||||  ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||  ||  ||||||||||||||||||||||| ||| ||    
T  3329766 gcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgtt 3329667  T
Q  111 acttattttt---agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgctt 206  Q
    ||||||||||   |||||   | || ||| ||  ||| ||||||||||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||    
T  3329666 acttatttttgtaagtttaacg-tataatgaa--agataagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggtt 3329570  T
Q  207 gcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||    
T  3329569 gcagaaaagtaagcagcggttag 3329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 259
Target Start/End: Original strand, 2563809 - 2564057
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||  |||||||| |||||| || |||||||||||||||| |||||| |||||||||||  ||  |||||||||||| |||||||||||||  ||    
T  2563809 gcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgtt 2563907  T
Q  111 acttattttt--agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttg 207  Q
    |||||||| |  |  |||  |||| ||||||  ||| ||||||||||  |||| ||||||||||||||||||||| |||||||||||||  ||| | |||    
T  2563908 acttatttctgtaagttcacgatataataaa--agataagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttg 2564005  T
Q  208 cagaaaagtaagcagcggttagaatatttcgaatacccctatttatattatt 259  Q
    |||||||||||| ||||||||| ||  ||||||| ||||| |||||||||||    
T  2564006 cagaaaagtaagtagcggttaggatccttcgaatccccctgtttatattatt 2564057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 17153261 - 17153045
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||| |||||||||||||  || ||||||||| ||||||||||||| |||||||||||  || ||||||||||||| || |||||  | || |||    
T  17153261 cggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgtta 17153162  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgca 209  Q
    |||||||| ||||  ||  |||||||||| |||| |||||||||| | |||  |||||||||||||||||||| |||||| ||||||  ||||| |||||    
T  17153161 cttattttaagttgacgacataaaataaaagagataagggttaga-gattgttatttttatctgtttgcaacaaagcaag-ttacctgtttttggttgca 17153064  T
Q  210 gaaaagtaagcagcggtta 228  Q
    |||||||||||||||||||    
T  17153063 gaaaagtaagcagcggtta 17153045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 5108567 - 5108801
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| ||||| ||| |||||||||||||||| |||||| |||||||||||  ||  |||||||||||| ||||||||||| | |  ||||||||||    
T  5108567 caagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgaac-acttattttt 5108664  T
Q  121 agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaag 219  Q
    |  ||   |||| |||||| ||| | | |||||||  ||| |||||||||||||||||||| | ||||||||||| | |||||| |||||||||||||||    
T  5108665 aagttgacgatataataaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaag 5108764  T
Q  220 cagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||| ||  || |||| ||||||||||||||    
T  5108765 cagcggttaggattctttgaatccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 7492364 - 7492163
Alignment:
Q  18 tagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatt 117  Q
    ||||| |||||| |||||  ||| | ||||||||| ||||||||| |||||||||||  ||  |||||| ||||| | ||||||||||||||||||||||    
T  7492364 tagactagtgtaccaaattgttatccagtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatt 7492265  T
Q  118 tttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagt 216  Q
    |||| |||  ||||| |||||| |||  ||||||||||   |||||||||||| |||||||||||| |||||| ||||||  ||||| ||||||||||||    
T  7492264 tttattttgatgatataataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagt 7492166  T
Q  217 aag 219  Q
    |||    
T  7492165 aag 7492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 7318265 - 7318445
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| || ||| || ||||||||||||||||||||||| |||||||||||  ||  |||||||||||| || |||||  | ||||||    
T  7318265 cggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcatta 7318364  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||||| ||||  ||  |||||||||| |||| |||||||||| | ||||||||||||||||||||||||| ||||||||    
T  7318365 cttattttaagttgacgatataaaataaaagagataagggttaga-gattgcaatttttatctgtttgcaacagagcaagtt 7318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 1848307 - 1848119
Alignment:
Q  39 taccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt---agtttcgtgataaaa 135  Q
    |||||||||||||||||||||||| |||||||||||  | | ||||||| |||| |||||||||||||| ||||||||||||   |||||   |||| ||    
T  1848307 taccaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataa 1848208  T
Q  136 taaacgagaaaagggttagacgg-ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
     ||       ||||||||||  | |||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  1848207 aaatt-----aagggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctgttttggttgcagaaaagtaagcagcggtta 1848119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 9731735 - 9731517
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||| || |  ||||| |||||||||||||| ||||||||| |  ||  |||||||||||| ||||||||||| || ||    
T  9731735 gcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgtt 9731636  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgca 209  Q
    |||||||||||||||  |||||||||||| |||  | |  |||||   ||||||||||||||| | || ||||||||||| ||||||  ||||| |||||    
T  9731635 acttatttttagtttgatgataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaag-ttacctgtttttggttgca 9731537  T
Q  210 gaaaagtaagcagcggttag 229  Q
     |||||||||||||||||||    
T  9731536 taaaagtaagcagcggttag 9731517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 4785828 - 4786077
Alignment:
Q  12 gcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||  |||  ||| |||||||||||| ||||| || ||  | |||    
T  4785828 gcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgtta 4785927  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaa---tttttatctgtttgcaacatagcaagtttacct-attttgctt 206  Q
    |||||||||||||  ||  |||||||||| |||  ||||||||||   ||  ||   ||||||||| ||||||| | |||||| ||||||  ||||| ||    
T  4785928 cttatttttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaag-ttacctgtttttggtt 4786026  T
Q  207 gcagaaaagtaagcagcggttagaatatttcgaatacc-cctatttatatt 256  Q
    ||||||||||||||||||||||| ||  ||||||| || ||||||||||||    
T  4786027 gcagaaaagtaagcagcggttaggattcttcgaatccctcctatttatatt 4786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 6042452 - 6042685
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||||||||||||||||||| || |||| |||||||| || |||||| |||||||||||  ||||| |||||||||| | |||||||||||| ||    
T  6042452 gcggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgtt 6042550  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacc-tattttgcttgca 209  Q
    |||||||||||||||   | || |||||| ||         ||||  |||||||||||||| ||||||||||| || ||||||||| | ||||| |||||    
T  6042551 acttatttttagtttgacggtataataaaaga---------taga-tgttgcaatttttatatgtttgcaacagag-aagtttacctttttttggttgca 6042639  T
Q  210 gaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    ||||| |||||||||||||| ||  || |||| ||||||||||||||    
T  6042640 gaaaaataagcagcggttaggattctttgaat-cccctatttatatt 6042685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 8313476 - 8313291
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt---tgcattacttatttttagtttcgtg-ataa 133  Q
    ||||||||||||||||||||||||| | |||||||||  ||| |||||||||||| || |||||| |   ||  ||||||||||| ||||    | ||||    
T  8313476 ttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaagttgaaggtataa 8313377  T
Q  134 aataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    |||||| |||  |||||||||| | ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||    
T  8313376 aataaaagagttaagggttaga-gattgcaatttttatctgttttcaacagagcaagtt-acctattttggttgcagaaaagtaagca 8313291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 221
Target Start/End: Original strand, 3734614 - 3734796
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||||||||  ||   ||||| ||||  |||||||||||  | ||||||||||| ||||  ||  |||||||    
T  3734614 ttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttattttaagttgacgatataaaat 3734713  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    ||| |||  |||||||| | | |||||| |||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  3734714 aaaagagttaagggtta-aagattgcaaattttatctgtttgcaacagagcaag-ttacctgttttggttgcagaaaagtaagca 3734796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 10587130 - 10586953
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||| |||||||||||| || |||||| |    ||||    
T  10587130 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttac 10587031  T
Q  113 ttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaag 190  Q
    ||||||| ||||| |   |||||||||| || | |||||||| | | ||||||||||||||||||||||||| ||||||    
T  10587030 ttattttaagtttacaatataaaataaaagaaataagggtta-aagattgcaatttttatctgtttgcaacagagcaag 10586953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 8979103 - 8978896
Alignment:
Q  23 aagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt-- 119  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||  ||  |||||| ||||| ||||||||||| ||||||||||||||      
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttgg 8979004  T
Q  120 tagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaa 218  Q
    ||  ||  ||| || ||||| || |||||||||||    |||||||||| |||||||||||| | | |||||||||||  ||||| |||||||||| |||    
T  8979003 taagtt--tgacaatataaaagataaaagggttag-gatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataa 8978907  T
Q  219 gcagcggttag 229  Q
    ||||| |||||    
T  8978906 gcagcagttag 8978896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 13418658 - 13418730
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||||    
T  13418658 ggttgcaatttttatctgtttgcaacagagcaagtttacctgttttgattgcagcaaagtaagcagcggttag 13418730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 16306686 - 16306792
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||||||||||||| ||||| || | ||||||||||||||||||||| |||||||||||  ||  |||| || ||||||| |||||||||||||||    
T  16306686 cggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcatta 16306785  T
Q  112 cttattt 118  Q
    |||||||    
T  16306786 cttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 4818828 - 4818940
Alignment:
Q  12 gcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||  |||  ||| |||||||||||| ||||| || ||  | |||    
T  4818828 gcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgtta 4818927  T
Q  112 cttatttttagtt 124  Q
    |||||||||||||    
T  4818928 cttatttttagtt 4818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 17077252 - 17077324
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| | || |||||||||| ||||| |||||||||||||||||||||||||    
T  17077252 ggttgcaatttttatctgtttgcaatagagtaagtttacctgttttgtttgcagaaaagtaagcagcggttag 17077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 8877559 - 8877630
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaa-agtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgcaaaaatagtaagcagcggttag 8877630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 6013587 - 6013800
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| ||||||||| | |||||| | |||||||||||| |||||||||||  ||  |||| || ||| |||||||||||| || |||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttact 6013686  T
Q  114 tatttttagtttcgtg--ataaaataaacgagaaaagggttagacggttgcaa-tttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    || |||||||||  ||  |||||||||| ||| |||||||||| || |||||| ||||||| ||||||||||| ||||| ||||| |  |||| ||||||    
T  6013687 ta-ttttagtttgatgatataaaataaaagagtaaagggttag-cgattgcaattttttatttgtttgcaacaaagcaa-tttacat-gtttggttgcag 6013782  T
Q  211 aaaagtaagcagcggtta 228  Q
    |||||| |||| ||||||    
T  6013783 aaaagtgagcaacggtta 6013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 10937598 - 10937700
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||  ||  |||||||||||||  |||||||||  |||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 10937697  T
Q  116 ttt 118  Q
    |||    
T  10937698 ttt 10937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 20582394 - 20582464
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  20582394 ttgcaatttttatctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttag 20582464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 5530039 - 5530119
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||| |||||||||||| ||||||||  |||||||| ||||||| |||||||||||||  ||||||||||    
T  5530039 ttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 253
Target Start/End: Original strand, 9574425 - 9574639
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    |||||||| |||||||||||||||| |||||||||||  |||||||||| ||||| || |||| | | || ||| ||||||| ||||  ||  |||||||    
T  9574425 ttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttatttattttaagttgacgatataaaat 9574524  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatattt 236  Q
    ||| |||  ||||||||||   ||| ||||||||||||||||||| | |||||| | ||||  |||| ||| |||||||||| |||| ||||| ||  ||    
T  9574525 aaaagagttaagggttaga-aattgtaatttttatctgtttgcaatagagcaag-taacctggtttgtttgaagaaaagtaaacagcagttaggattctt 9574622  T
Q  237 cgaatacccctatttat 253  Q
     |||| |||||||||||    
T  9574623 tgaatccccctatttat 9574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 229
Target Start/End: Complemental strand, 39273256 - 39273066
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt---agtttcgtgataaa 134  Q
    |||| |||||||||||||||||||| ||||||||||    |  |||||||||||| |||||| ||||||  ||||||||||||   |||||   ||||      
T  39273256 ttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgata-- 39273159  T
Q  135 ataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
     ||||  ||  |||||||| |  ||||||| ||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  39273158 -taaa--agttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttag 39273066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 2350855 - 2350645
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| ||||||||| ||||||||||||| || |||||| | |||||||||  ||  |||||||||||  |||||| |||  || ||    
T  2350855 gcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgtt 2350756  T
Q  111 acttatttttagtttcgtgataaaataaacgag-aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    |  ||||||||||||   |||||||||||  ||  |||||||||||   || |||||||||||||||| ||||| | |||  |||||| ||||| |||||    
T  2350755 aaatatttttagtttgaagataaaataaaatagttaaagggttagagattttcaatttttatctgtttacaacacatcaa-attacctgttttggttgca 2350657  T
Q  210 gaaaagtaagca 221  Q
     |||||||||||    
T  2350656 aaaaagtaagca 2350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 31492922 - 31493029
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||| || ||||||||||||||| || |||| |||||||||||||||||| |||||||||||  ||  |||||||||||  |||||||||||||  |||    
T  31492922 cggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgtttta 31493021  T
Q  112 cttatttt 119  Q
    ||||||||    
T  31493022 cttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 9864433 - 9864327
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||  || ||||||||||||||||||||||| |||||| ||||  ||  |||||||||||| || ||||||||||| |||    
T  9864433 cggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgtta 9864334  T
Q  112 cttattt 118  Q
    |||||||    
T  9864333 cttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 16365697 - 16365942
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||| ||||||| |||||| || ||||||||||||||| | ||||| |||||||||||  ||  |||||||||||  | ||||||||| || |||    
T  16365697 cggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgtta 16365796  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcag 210  Q
    ||||||||||  ||   |||| |||||| |||  |||| |||||   || ||||||| |||| |||||| |  |||||| |||| |  ||||| |||||     
T  16365797 cttatttttaagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaag-ttacatgtttttggttgcaa 16365895  T
Q  211 aaaagtaagcagcggttagaatatttcgaat-acccctatttatatt 256  Q
    ||||||||||||||||||| ||  |||||||  ||||||||||||||    
T  16365896 aaaagtaagcagcggttaggattcttcgaatctcccctatttatatt 16365942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 10584592 - 10584487
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    |||||||||||||||| |||||| || | ||||||||||||||||||| |||||||||||||  ||  ||||||||||||||  |||||||| |  ||||    
T  10584592 ggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttac 10584493  T
Q  113 ttattt 118  Q
    ||||||    
T  10584492 ttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 11803103 - 11803180
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||||||||||| |||||||||||  ||| ||||||| |||| ||||||||||| || ||||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattttt 11803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 23100056 - 23099967
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||| |||||||| |||||| || ||||| ||||||||||||||||| |||||||||||  || ||||||||||||| |||||||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 22339418 - 22339312
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaata---aagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||| |||| ||||||||| | |||||||||   |||||||||||||||||||| ||| |||  |||||||||||| ||||||||||| || |||    
T  22339418 attagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgcctta 22339319  T
Q  112 cttattt 118  Q
    |||||||    
T  22339318 cttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 4449104 - 4449179
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaat 232  Q
    ||||| |||||||||||||||||| || ||| | ||||||||||||| ||||| |||||||| |||||||||||||    
T  4449104 ggttgaaatttttatctgtttgcagcagagcgaatttacctattttggttgcaaaaaagtaaacagcggttagaat 4449179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 8054016 - 8053953
Alignment:
Q  166 ttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  8054016 ttttatctatttgcaatatagcaagtttacctgttttggttgcagaaaagtaagcagcagttag 8053953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 16297925 - 16297722
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| ||||| ||| |||||||||||| |||||||||| | ||||||||   ||  ||||||| |||| |||||||||||  |||||||    
T  16297925 gattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattcacattact 16297826  T
Q  114 tatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaa 212  Q
    ||||||             ||| ||| |||  ||||||||||   ||||||||||||| ||||||||||| || ||||| ||||||||| | ||||||||    
T  16297825 tatttt-------------aaacaaaagagttaagggttagaaa-ttgcaatttttatatgtttgcaacagagtaagtt-acctatttttggttgcagaa 16297741  T
Q  213 aagtaagcagcggttagaa 231  Q
    |||||||||||||||||||    
T  16297740 aagtaagcagcggttagaa 16297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 18449238 - 18449340
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| ||||||||||||||  || ||||||||||||||||| ||||| | |||||||||   || ||||||||||||| |||||||||| || |||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggcgttactta 18449337  T
Q  116 ttt 118  Q
    |||    
T  18449338 ttt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 18662433 - 18662539
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||  ||||||||||||||| || |||||| | |||||||||||||| |||||||||||  ||  |||||||||||| |||||||||||  | |||    
T  18662433 cggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgtta 18662532  T
Q  112 cttattt 118  Q
    |||||||    
T  18662533 cttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 18662579 - 18662648
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||| ||||||||| |||||||||||||||    
T  18662579 ttgcaatttttatttgtttgcaacagagcaag-ttacctgttttggttgcagaaatgtaagcagcggttag 18662648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 15869588 - 15869649
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  15869588 ggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 15869649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 11803205 - 11803277
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||| ||||||||  ||||||||||| ||||||||||||| ||||| ||||||| |||||| ||||||||||    
T  11803205 ggttgaaatttttagttgtttgcaacagagcaagtttacctgttttggttgcagagaagtaaccagcggttag 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 229
Target Start/End: Complemental strand, 18369061 - 18368869
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaa-at 136  Q
    ||||||||||||||||||||||||| ||||| |||||   || |||||||||||| |||||||||||    ||||||||||||| |    ||| ||| ||    
T  18369061 ttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattttta-taagttgacaaatat 18368963  T
Q  137 aaacgagaaaagggttagacggt--tgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    ||| ||  |||||||||||  ||  |||||||||||||||||||||||| |||||| ||||||  ||||| ||| ||||||||||| | |||||||    
T  18368962 aaaaga-taaagggttagaaagtcgtgcaatttttatctgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaagtaagaaacggttag 18368869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 11221262 - 11221163
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || || |||||||||| ||||||||| ||||| |||||  ||| |||||||||||| |  ||||||||||| ||||||||||||    
T  11221262 caagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 7397280 - 7397350
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| | ||||||  |   ||||| |||||||||||||||||||||||||    
T  7397280 ttgcaatttttatctgtttgcaacaaaacaagttatctgtttttggttgcagaaaagtaagcagcggttag 7397350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 13759941 - 13759859
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    ||||||| ||||||||||||||||| |||||| ||||  ||  |||||||||||| |||||||| || || ||||||||||||    
T  13759941 ttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattttt 13759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 10648596 - 10648677
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    |||||||||||||||||||||| || |||||| |||  |||  ||||||||||||||| |||||||| |  |||||||||||    
T  10648596 ttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 1584537 - 1584647
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| ||| ||||| ||||||||||||||||||||||  |||||||||||  ||| |||||| ||||| || |||||| | || |||    
T  1584537 cggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgtta 1584634  T
Q  112 cttatttttagtt 124  Q
    |||||||| ||||    
T  1584635 cttattttaagtt 1584647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 8054587 - 8054504
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||| |||||| || ||||| ||||||||||||||||| ||||||||||   |||  ||||||||||| |||||||||||    
T  8054587 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaatt 8054504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 9500439 - 9500542
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| ||||||||  |||||||| |||||||||||| ||||| | || |||||||||||  ||  |||||| ||||| || |||||||| |||||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattactt 9500538  T
Q  115 attt 118  Q
    ||||    
T  9500539 attt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||||||||||||||||||| |||||  ||  |||||||||||| || |||||||||   ||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 5797503 - 5797565
Alignment:
Q  13 cggattagacaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||| |||||||| ||||||  ||||||||||||||||| ||||||| |||||||||||    
T  5797503 cggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatc 5797565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 9916562 - 9916664
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| ||||| || ||||||||| |||| |||||||||| ||||||| |||||||||||  ||  |||||| |||||| ||||||||| ||  |||||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9916661  T
Q  116 ttt 118  Q
    |||    
T  9916662 ttt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 9924474 - 9924576
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactta 115  Q
    |||| ||||| || ||||||||| |||| |||||||||| ||||||| |||||||||||  ||  |||||| |||||| ||||||||| ||  |||||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9924573  T
Q  116 ttt 118  Q
    |||    
T  9924574 ttt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 14195932 - 14195871
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    ||||||||||||||||||||||||| |||||| ||| || ||||| ||||||||| |||||||    
T  14195932 ttgcaatttttatctgtttgcaacagagcaag-ttatctgttttgattgcagaaatgtaagca 14195871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 1587673 - 1587884
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||| |||| |||||| || || ||||| ||||||||||| || |||||| ||||  || |||| || ||||||||||||||||| || |||    
T  1587673 cggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgtta 1587772  T
Q  112 cttatttttagttt---cgtgataaaataaacgagaaaagggttaga-cggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttg 207  Q
    | ||||||  ||||   ||  |||||||||| ||    |||||||||  | ||||||||||||| ||||||||||| |||||| |||||  | ||| |||    
T  1587773 cctatttt--gttttgacgatataaaataaaaga-tttagggttagagagattgcaatttttatttgtttgcaacagagcaag-ttacc--tcttggttg 1587866  T
Q  208 cagaaaagtaagcagcgg 225  Q
    ||||||||||||||||||    
T  1587867 cagaaaagtaagcagcgg 1587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 8054156 - 8054060
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || |||||||||||||||||||| || |||||||||||  ||   |||||||||   |||||||||||  ||||||||||||||    
T  8054156 caagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattttt 8054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 21102395 - 21102294
Alignment:
Q  17 ttagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttat 116  Q
    ||||| ||||||||  |||| ||||||||||||||||||||||||| ||||| ||||   ||  |||||||||||||     | ||||||||||||||||    
T  21102395 ttagataagtgtattgaatcgttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgtttcaattggaaaatttgcattacttat 21102296  T
Q  117 tt 118  Q
    ||    
T  21102295 tt 21102294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 16058991 - 16058923
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||| ||||| ||||| |  ||||| |||||| |||||||||||| |||||    
T  16058991 caatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttag 16058923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 17077112 - 17077212
Alignment:
Q  5 tgatgtagcggattagacaagtgtatcaaa-tcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaat 103  Q
    |||||||||||||||||||| |||| |||| |  ||| ||| ||||||||||||| ||| ||||| |||||    | |||||||||||| ||||||||||    
T  17077112 tgatgtagcggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaat 17077211  T
Q  104 t 104  Q
    |    
T  17077212 t 17077212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 18466031 - 18466103
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||| |||| ||||||   || |||| |||||||| ||||||||||||  ||||||||||    
T  18466031 taataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 18495391 - 18495471
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||| |||||||||||||||||||||||||  |||||    | |||||||||||| || ||||||||||  ||||||||||    
T  18495391 ttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatttgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 19153434 - 19153493
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaa 218  Q
    ||||||||||||||||||||||||||| |||| ||||||  ||||| ||||||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa 19153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 20752833 - 20752892
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaa 218  Q
    ||||||||||||||||||||||||||| |||| ||||||  ||||| ||||||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa 20752892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 22067198 - 22067130
Alignment:
Q  161 gcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||| ||| ||||||| ||  | ||||||| ||||| ||||||||||||||||| |||||||    
T  22067198 gcaatttttatatgtctgcaacaaagagaatttacctgttttggttgcagaaaagtaagcaacggttag 22067130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 4579239 - 4579285
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  4579239 caatttttatctgtttgtaacatagcaag-ttacctattttggttgca 4579285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 4986547 - 4986713
Alignment:
Q  13 cggattagacaagtgtatcaaatc-attaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| ||||||  |||||||||||||||||| | |||| ||||| ||| |  ||  |||||||||||| || ||| |  | || |||    
T  4986547 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4986646  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttg 178  Q
    |||||||| ||||  ||  | |||||||| | |  |||||||||| | ||||||||||||||||||||    
T  4986647 cttattttaagttgacgataaaaaataaaagtgttaagggttaga-gattgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 4990645 - 4990811
Alignment:
Q  13 cggattagacaagtgtatcaaatc-attaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| ||||||  |||||||||||||||||| | |||| ||||| ||| |  ||  |||||||||||| || ||| |  | || |||    
T  4990645 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4990744  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttg 178  Q
    |||||||| ||||  ||  | |||||||| | |  |||||||||| | ||||||||||||||||||||    
T  4990745 cttattttaagttgacgataaaaaataaaagtgttaagggttaga-gattgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 9131049 - 9131136
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccc 246  Q
    ||||||||||||| ||||||||| | |||||||| ||   ||||| ||||| |||||||||| |||||||| ||  ||||||| ||||    
T  9131049 ttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagctgcggttaggattcttcgaatccccc 9131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 17829696 - 17829801
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaataccc 245  Q
    ||||||||| || ||| ||||||||||||||||||||| | |||| ||| || ||||| ||| |||||| ||||||| |||||  ||  ||||||| |||    
T  17829696 aagggttag-cgattgtaatttttatctgtttgcaacagaacaag-ttaactgttttggttggagaaaattaagcagtggttaagattcttcgaatcccc 17829793  T
Q  246 ctatttat 253  Q
    ||||||||    
T  17829794 ctatttat 17829801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 1872778 - 1872884
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| |||||||  |||||| || || |||||||| | ||||||||| |||||||||||  || |  |||||||||||| ||||||||| |  ||||    
T  1872778 ggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttac 1872877  T
Q  113 ttatttt 119  Q
    |||||||    
T  1872878 ttatttt 1872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 4449002 - 4449064
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||||||||||||||||||| |||||  ||| || |||| |||  |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaatt 4449064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 6006084 - 6006145
Alignment:
Q  166 ttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||||||||| || ||||| |||| ||||| | ||||||||||||| ||||||||    
T  6006084 ttttatctgtttgcaacagagtaagtt-acctgttttggtggcagaaaagtaagtagcggtta 6006145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 8293997 - 8293948
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaa 213  Q
    ||||||||||||||||||||| |||||| |||||| ||||| |||||||||    
T  8293997 aatttttatctgtttgcaacagagcaag-ttacctgttttggttgcagaaa 8293948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 10648717 - 10648770
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaa 213  Q
    ||||||||||||||||||||||||| |||||| |||| | ||||| |||||||||    
T  10648717 ttgcaatttttatctgtttgcaacaaagcaag-ttacatgttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 15303723 - 15303666
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||| |||||| || |||| ||||||||||| ||||||||||||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatc 15303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 16224176 - 16224138
Alignment:
Q  80 agattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  16224176 agattgtcgtttcgtctaaacaatttgcattacttattt 16224138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 13418553 - 13418634
Alignment:
Q  40 accaagtaataaa-gtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    ||||||||||||| |||||||||| |||||||||||   || ||||||| |||| |||||||| ||  | ||||||||||||    
T  13418553 accaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttattttt 13418634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 17203047 - 17203123
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||| ||||||| ||||||||||   | | |||||||||||| ||||||||||  || ||||||||||||    
T  17203047 aagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttattttt 17203123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  26 tgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 3191134 - 3191074
Alignment:
Q  44 agtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||||| |||||||||||  ||||   || |||||||||||| |||||||||||    
T  3191134 agtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaatt 3191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 4579116 - 4579195
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||| ||||||||| |||||||||| |||||||||||   |||||||||| |||  ||||||||||| |  ||||||||||    
T  4579116 ttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 13277628 - 13277700
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||| | | ||| | || |||| ||||| ||| ||||||||||| |||| ||||    
T  13277628 ggttgcaatttttatctgtttgctatagagcgaattgacctgttttggttgtagaaaagtaagtagcgattag 13277700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 9e-42; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 19562286 - 19562053
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||| |||    
T  19562286 gcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtatt 19562187  T
Q  111 acttattttt--agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttg 207  Q
    ||||||||||  |||||     || |||||| || ||||||||||     ||||||||||||||| ||||||||| |||||||||||||  ||||| |||    
T  19562186 acttattttttaagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttttggttg 19562087  T
Q  208 cagaaaagtaagcagcggttagaatatttcgaat 241  Q
    ||||||||||| |||||||||||||  |||||||    
T  19562086 cagaaaagtaatcagcggttagaattcttcgaat 19562053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 40227770 - 40228014
Alignment:
Q  14 ggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||| || ||| |||||   ||  ||||| ||||||||||||||||| || |||||    
T  40227770 ggattaggcaagtgtaccaaatcgttaccaagtaataaagtgataagttaa-tattgtatccataggaattgtagtttcatccaaacaattcgcgttact 40227868  T
Q  114 tatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaa 212  Q
    ||||||||||||   ||||| ||||| ||| |||||| |||| | || |||||||||||||||||||||  || ||||||||||| ||||  |||| |||    
T  40227869 tatttttagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatctgtttgcaacggagtaagtttacctattttttgttgccgaa 40227968  T
Q  213 aagtaagcagcggttagaatatttcgaatacccctatttatattatt 259  Q
    || |||||||||||||| || | | |||| |||||||||||||||||    
T  40227969 aaataagcagcggttaggat-tcttgaatccccctatttatattatt 40228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 17337223 - 17337032
Alignment:
Q  31 caaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtga 130  Q
    |||||||||||| |||||||| |||||||||| |||||||||||   |||||||||| |||| |||||||||||||| ||||||||||||||||    ||    
T  17337223 caaatcattaccgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgac-ga 17337125  T
Q  131 taaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcag 222  Q
    || |||||| ||| |||||||| ||   ||||||||||||||||||| ||||| |||||||||||||  ||||| ||||| ||||||||||||    
T  17337124 tataataaaagagtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcag 17337032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 12578372 - 12578176
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||| || |||||||||||  ||  |||||||||||  |||||||||||||| || |    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttc 12578273  T
Q  113 ttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    ||||||| ||||  ||  |||||||||| ||| ||||||||||| | || |||||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  12578272 ttattttaagttgacgatataaaataaaagagtaaagggttaga-gattacaatttttatctgtttgcaacagagcaag-ttacctgttttggttgcag 12578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 17216835 - 17217028
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt--agtttcgtgataaaa 135  Q
    |||||||| |||||||||||||||| |||||| ||||  ||  |||||||||||| |||||||||||  | |||||||| |||  |  ||  ||||| ||    
T  17216835 ttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttgtaagttgatgatataa 17216934  T
Q  136 taaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    || | || ||||||||||||  |||||||||||||||||||||||||| ||||||||||| | ||||| ||| ||||||||||||| |||||||    
T  17216935 tacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatgttttggttgtagaaaagtaagcaacggttag 17217028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 17671994 - 17672210
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || ||||||||||||||||||||||| ||||| |||||  ||  |||||| ||||| || |||||| | || |||    
T  17671994 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgtta 17672093  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| ||||  ||  |||||||||| |||  || ||||||| | ||||||||||||||||||||||||| |||||| ||||||  |||| ||||||    
T  17672094 cttattttaagttaacgatataaaataaaagagttaaaggttaga-gattgcaatttttatctgtttgcaacagagcaag-ttacctggtttggttgcag 17672191  T
Q  211 aaaagtaagcagcggttag 229  Q
    ||||||||| ||| |||||    
T  17672192 aaaagtaagaagcagttag 17672210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 24639558 - 24639324
Alignment:
Q  15 gattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||  |||| ||||||  |||||||||||||      |     
T  24639558 gattagagaagtgtatcaaatcattaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg------ta 24639465  T
Q  115 atttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaa 213  Q
    | |||||| ||   |||| ||||||  || |||||||||||   ||| || |||||| ||||||||||| ||||||||||||| |||| | |||||||||    
T  24639464 acttttag-ttgacgatataataaaatagtaaagggttagagatttgtaa-ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaa 24639367  T
Q  214 agtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    ||||||||| |||||| ||  || |||| || |||||||||||    
T  24639366 agtaagcagtggttaggattctttgaatccctctatttatatt 24639324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 15164766 - 15164964
Alignment:
Q  20 gacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||| |||||| || |||||||||| || | ||||| | |||||||||||  ||| ||||||| |||| |||||||||||||| ||||||||||    
T  15164766 gacaagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattt 15164865  T
Q  119 tt---agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaag 215  Q
    ||   |||||   ||||   ||||  ||  ||||||||||  |||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||    
T  15164866 ttgtaagtttgacgata---taaa--agttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctgttttggttgcagaaaag 15164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 13908855 - 13909063
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  |||||||||||| ||||||||||| |  ||||||||||||    
T  13908855 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 13908954  T
Q  121 agtttcgtgataaaataaacgagaaaagggttagacgg--ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagta 217  Q
        |  |||  | |||||  || ||| |||||||  |  ||||||||||||||||||||||||| |||||||||||||  ||||| ||||| |||||||    
T  13908955 gtaattttgacgatataaa--agtaaa-ggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagta 13909051  T
Q  218 agcagcggttag 229  Q
    ||||||||||||    
T  13909052 agcagcggttag 13909063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 17951403 - 17951189
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||    |   |||||||||| || ||  |  | || |||    
T  17951403 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17951304  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| ||||  ||  |||||||||| |||  | |||||||| | ||||||||||||||||||||||||| |||||| ||||||  |||| ||||||    
T  17951303 cttattttaagttgacgatataaaataaaagagtgacgggttaga-gattgcaatttttatctgtttgcaacagagcaag-ttacctgatttggttgcag 17951206  T
Q  211 aaaagtaagcagcggtt 227  Q
    ||||| |||||||||||    
T  17951205 aaaagcaagcagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 5679200 - 5679385
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||||||||||||| |||||| || |||||||||||||||||| |||| |||||||||||  ||   | | | ||||| ||||||||||| || ||||||    
T  5679200 attagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactt 5679299  T
Q  115 atttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattt 201  Q
    ||||| ||||  ||  |||||||||| |||  |||||||||||  |||||||||||||||||||| |||| |||||| ||||||||||    
T  5679300 attttaagttaacgatataaaataaaagagttaagggttagaca-ttgcaatttttatctgtttgtaacagagcaag-ttacctattt 5679385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 17955255 - 17955044
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||    |   |||||||||| || ||  |  | || |||    
T  17955255 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17955156  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| ||||  ||  |||||||||| |||  | |||||||| | ||||||||||||||||||||||||| |||||| ||||||  |||| ||||||    
T  17955155 cttattttaagttgacgatataaaataaaagagtgatgggttaga-gattgcaatttttatctgtttgcaacagagcaag-ttacctgatttggttgcag 17955058  T
Q  211 aaaagtaagcagcg 224  Q
    ||||| ||||||||    
T  17955057 aaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 14648889 - 14649066
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||| |||||||||||| || ||| |  | |  |||||    
T  14648889 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacag-gattgtcgtttcttctaaatagctcgtgttact 14648987  T
Q  114 tatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||| ||||  ||  |||||||||| || | |||||||||| | || |||||||||||||||||||||| ||||||||    
T  14648988 tattttaagttgacgatataaaataaaagacataagggttaga-gatttcaatttttatctgtttgcaacagagcaagtt 14649066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 19636682 - 19636483
Alignment:
Q  23 aagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttag 122  Q
    ||||||| |||||| |||| ||||||||||||| |||||| ||||| |||||   || ||||||||||||||||||||||||    ||||||||||| ||    
T  19636682 aagtgtaccaaatcgttacaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattttaag 19636583  T
Q  123 tttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcag 222  Q
    |||   ||||||||||| |||  ||||||||||   |  | |||||||| |||||| | || ||||||||   |||||||  ||| ||||||||||||||    
T  19636582 tttgacgataaaataaaagagttaagggttagagattcactatttttatatgtttgtagcagagcaagtt--actatttttgttgtagaaaagtaagcag 19636485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 7582299 - 7582396
Alignment:
Q  23 aagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||  ||  |||||| ||||| |||||||||| |||||||||||||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttatttt 7582396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 13128978 - 13128768
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| |||||||| |||||| || ||||||||||||| ||||||||| ||||| |||||   || |||||||||||| ||||||||| | || ||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttactt 13128879  T
Q  115 at--ttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt--gcttgcag 210  Q
    ||  |||||| ||    ||| ||||||  ||| ||||||||||  |||||||||||||| |||||| |||| || |||||| ||| ||||  | ||||||    
T  13128878 atttttttag-ttgaccatataataaa--agataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggttgcag 13128782  T
Q  211 aaaagtaagcagcg 224  Q
    ||||||||||||||    
T  13128781 aaaagtaagcagcg 13128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 9052666 - 9052772
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| ||||||||| ||||||||||||| || |||||| ||||||||||| ||| ||||||| |||||| ||||||||||  | |||    
T  9052666 cggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgtta 9052764  T
Q  112 cttatttt 119  Q
    ||||||||    
T  9052765 cttatttt 9052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 19492798 - 19492699
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || |||||||||||||| |||||||| |||||||||||  ||   ||||||||||||||||||||||| || ||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattttt 19492699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 25121186 - 25121096
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatt 250  Q
    ||||||||| ||||||||||||||| |||||||| |||  ||||| ||||||||||||||||||||||||| ||  ||||||| ||||||||    
T  25121186 ttgcaatttctatctgtttgcaacagagcaagtt-acccgttttgattgcagaaaagtaagcagcggttaggattcttcgaatccccctatt 25121096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 11490554 - 11490631
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||| ||||| ||||||||||| || |||||||||||    
T  11490554 caagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 20829845 - 20829666
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||| | | |||| |||||  ||  |||||| ||||| | |||| |||||||||||    
T  20829845 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataactga-gtattgtatccacaaggattgttgtttcgttcaaaaaatttgcatta 20829747  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaagggtt-agacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||||| ||||    |||||||||||  ||| ||||||| |||   || |||||||||||||||||| ||||||||||||    
T  20829746 cttattttaagttcgacgataaaataaa-aagataagggttaagagatttacaatttttatctgtttgcgacatagcaagtt 20829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 21323982 - 21323874
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||||||  ||||| || ||||| |||||| ||||| |||| |||||||||||  || ||||||||||||| ||||||||||| || |||    
T  21323982 cggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgtta 21323883  T
Q  112 cttattttt 120  Q
    |||||||||    
T  21323882 cttattttt 21323874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 13692774 - 13692668
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| |||||| || ||||||||||||||||||||||| |||||| ||||  ||  ||||||||||||  |||||||||| |  |||||    
T  13692774 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttact 13692675  T
Q  114 tattttt 120  Q
    |||||||    
T  13692674 tattttt 13692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 19882632 - 19882738
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||||||  ||||| || | |||||||||||||||| |||| |||||||||||  ||  |||||||||||| ||||||||||| || |||    
T  19882632 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgtta 19882731  T
Q  112 cttattt 118  Q
    |||||||    
T  19882732 cttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 20315001 - 20315098
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||| |||||| || ||||||||||||| ||||||||| | |||| ||||  ||  |||||||||||| |||||||||||||| ||||||||||    
T  20315001 caagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 16730374 - 16730318
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt 202  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||    
T  16730374 aagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacctgtttt 16730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 17709896 - 17709987
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatat 255  Q
    ||||||||| ||||||||||| ||||||||||||| ||||| ||||| ||||||||| ||| ||||| ||  ||||||| ||||||| |||||    
T  17709896 aatttttatatgtttgcaacagagcaagtttacctgttttggttgcaaaaaagtaagtagctgttaggattcttcgaat-cccctatgtatat 17709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 19492675 - 19492585
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccc 246  Q
    ||||||||| ||||| ||||||||||| ||||||||||| |  ||||| |||||||||||||||| |||||||| ||  ||||||| ||||    
T  19492675 ggttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggttaggattcttcgaatccccc 19492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 8969825 - 8969722
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||||||||||||| ||||| ||| || ||||||||||||| |||||| || | ||||||  | |||||||||||||| ||||||||||| |  ||||||    
T  8969825 attagacaagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttactt 8969727  T
Q  115 atttt 119  Q
    |||||    
T  8969726 atttt 8969722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 11093960 - 11094048
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||| |||||||||||||| || ||||||||||||| ||||| ||| ||| || ||||  |||||||||||||||||  |||||||||    
T  11093960 ttagataagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttcaatcaaacaatt 11094048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 12318425 - 12318481
Alignment:
Q  13 cggattagacaagtgtatcaaatcatta-ccaagtaataaagtgataagtaaagtat 68  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  12318425 cggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 17026306 - 17026234
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||| ||||||||||||||||||| || || |||||||  ||||| ||||||| |||||||||||||||||    
T  17026306 gttgcagtttttatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttag 17026234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 19092317 - 19092503
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt-cgtgataaaataaac 140  Q
    ||||||||||||||||||| | ||||||| ||   ||  |||||||||||| ||||||||| |  | || |||||||| ||||  ||  || |||||||     
T  19092317 caagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgcttattttaagttgacgatattaaataaaa 19092416  T
Q  141 gagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||| ||| |||||| | ||||||||||||||||||| ||||| || ||  |||||| ||||| || |||||||||||  |||||||||    
T  19092417 gagataagagttaga-gattgcaatttttatctgtttacaacagagtaa-attacctgttttggttacagaaaagtaaatagcggttag 19092503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 22357616 - 22357459
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaag---tatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataa 133  Q
    ||||||||||||||||||||||||||||   |||||||||  ||  ||||||||||||||  ||||| || |  ||||||||||  ||||  ||  ||||    
T  22357616 ttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgttacttatttaaagttgacgatataa 22357517  T
Q  134 aataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    || | | |||| ||| |||||| | ||||||||||||| ||||||||| ||||||||||    
T  22357516 aaaataagagataagagttaga-gattgcaatttttatttgtttgcaatatagcaagtt 22357459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 25121306 - 25121227
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||||||||||| |||||| |||||||||||  ||  |||||| ||||| ||||||||||| || ||||||||||    
T  25121306 ttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 26115865 - 26115775
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatt 250  Q
    ||||||||||||||||||||||||| || ||| |||||| ||||| ||||| ||| || |||||||||||| ||  ||| ||| ||||||||    
T  26115865 ttgcaatttttatctgtttgcaacagagtaag-ttacctgttttggttgcataaatgttagcagcggttaggattcttcaaatccccctatt 26115775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 19929773 - 19929605
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| ||||||||| ||||||||| |||||||||| || |||||||||||  ||  |||||||||||| || ||| |    |  |||||||||||     
T  19929773 caagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttatttta 19929674  T
Q  121 agtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaa 189  Q
    ||||  |   |||||||||| |||| |||||||| | | || |||||||||||||||||||||| |||||    
T  19929673 agttgacaatataaaataaaagagataagggtta-aagatttcaatttttatctgtttgcaacagagcaa 19929605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 23080334 - 23080439
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    |||||||| |||||||  |||| ||| ||||| |||||| |||||||||| | ||| ||||   ||  ||||||||||||| ||||||||||||| ||||    
T  23080334 ggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttac 23080433  T
Q  113 ttattt 118  Q
    ||||||    
T  23080434 ttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 25094691 - 25094763
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||| | |||||||| |||||  || ||||||  |||||||||||||    
T  25094691 gttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttag 25094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 25097958 - 25098030
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||| |||||| ||||| |||||||  ||||| |||  |||||||| |||||||||||    
T  25097958 gttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttag 25098030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 7582435 - 7582506
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||| |||||||||||| | | |||||||||||  ||||| |||||||||| ||||||| ||||||    
T  7582435 ttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagtggttag 7582506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 9737616 - 9737561
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagta 67  Q
    |||||||| |||||||| |||||| || |||||||||||||||||| |||||||||    
T  9737616 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagta 9737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 10589719 - 10589781
Alignment:
Q  27 gtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtt 90  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||  ||| ||||||||||    
T  10589719 gtatcaaatccttaccaagtaataaagtgataagt-gagtgtcgtatcaacagggattgtcgtt 10589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 12761272 - 12761303
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||||||||||    
T  12761272 aagtaataaagtgataagtaaagtatcgtatc 12761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 19374916 - 19374814
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||||| ||||||| |||||| || | ||||||||||| || |||||| |||||||||||  | |||||||||||||  ||||||||||||  || ||||    
T  19374916 attagataagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaatttatataactt 19374818  T
Q  115 attt 118  Q
    ||||    
T  19374817 attt 19374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 22176060 - 22175977
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||| |||||| || | ||||||||||||||||||||| ||||| |||||   |||||||||| |||  |||||||||||    
T  22176060 caagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaatt 22175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 9264966 - 9264916
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    ||||||||||||||||||||||||| || |||||||| | ||||| |||||    
T  9264966 ttgcaatttttatctgtttgcaacagagaaagtttacgtgttttgattgca 9264916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 13692644 - 13692578
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcag 222  Q
    |||||||||||||||  ||||| || | |||||||||||||  ||||| ||||||||||||||||||    
T  13692644 ggttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaagtaagcag 13692578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 13992957 - 13992891
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||||||||||| |||||| |||||||||||  ||  |||| ||||||  |||||||||||    
T  13992957 ttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 11700675 - 11700614
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||||||||||| |||||  || ||||||||||||| |||||| || |||||||||||    
T  11700675 ggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatc 11700614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 17709758 - 17709811
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||| |||||| || ||||||||||||||||||||||| ||||| |||||    
T  17709758 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatc 17709811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 11521264 - 11521192
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||| ||||||||||   ||  |||||||||||| || |||| |||  ||||||||||||    
T  11521264 taataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttattt 11521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 15047146 - 15047182
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||| || ||||||||    
T  15047146 ttaccaagtaataaagtgataagtagaggatcgtatc 15047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15107278 - 15107242
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||| || ||||||||    
T  15107278 ttaccaagtaataaagtgataagtagaggatcgtatc 15107242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 22526390 - 22526462
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||| |||||||||||  ||   |||||||||||| |||||| || ||  ||||||||||    
T  22526390 taataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttattt 22526462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 29382467 - 29382222
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||| ||||    
T  29382467 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttac 29382368  T
Q  113 ttattttt---agtttcgtgataaaataaacgagaaaagggttag-acggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttg 207  Q
    ||||||||   ||||   |||  | |||||  ||  || |||||| | | ||||||||||||||||||||||||||||||||| |||||| ||||| |||    
T  29382367 ttatttttgtaagtt---tgacgatataaa--agttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttggttg 29382273  T
Q  208 cagaaaagtaagcagcggttagaatatttcgaatacccctatttatattat 258  Q
    ||||||||||||||| |||||| ||  ||| ||  ||||| ||||||||||    
T  29382272 cagaaaagtaagcagtggttaggattcttcaaacccccctgtttatattat 29382222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 256
Target Start/End: Complemental strand, 24114390 - 24114146
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||  || ||||||||||||| ||||||||| ||||||||||| |||| |||||||||||| ||||||||| |||| ||    
T  24114390 gcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgtt 24114291  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggtta-gacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    |||||||||| ||    |||  | |||||  ||| ||||||||  | |||||||||||||||||||||||| || ||||||||||||| ||||| |  |     
T  24114290 acttattttt-gtaagttgacgatataaa--agataagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctgttttggtatct 24114194  T
Q  210 gaaaagtaagcagcggttagaatatttcgaat-acccctatttatatt 256  Q
    |||||||||||||||||||| ||  |||||||  ||||||||||||||    
T  24114193 gaaaagtaagcagcggttaggattcttcgaatcccccctatttatatt 24114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 34497109 - 34497324
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| ||||| ||||||||| || |||||||||||||||||| |||| |||||||||||   ||||| ||||||||| ||||||||||   | |||||    
T  34497109 gattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttact 34497208  T
Q  114 tatttttagttt-cgtgataaaataaacgaga-aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcaga 211  Q
    |||||| | ||  ||  |||||||||| |||  ||||||||||| | ||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||    
T  34497209 tattttaaattgacgatataaaataaaagagttaaagggttaga-gattgcaatttttatctttttgcaacatagcatgtt-acctggtttgcttgcaga 34497306  T
Q  212 aaagtaagcagcggttag 229  Q
    ||||||||||||||||||    
T  34497307 aaagtaagcagcggttag 34497324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 14528141 - 14528360
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||  |||||| || ||||||||||||||||||| ||| |||||||||||  || ||||||||||||| ||||||||| |  | |||    
T  14528141 cggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgtta 14528240  T
Q  112 cttatttt-tagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    ||||||||  | |  ||  ||||||||||  ||  |||||||||| | |||||||||||| |||||||||||| |||||| ||||||  |||| ||||||    
T  14528241 cttattttaaactgacgatataaaataaaatagttaagggttaga-gattgcaatttttagctgtttgcaacaaagcaag-ttacctggtttggttgcag 14528338  T
Q  211 aaaagtaagcagcggttagaat 232  Q
    ||||||||||||||||| ||||    
T  14528339 aaaagtaagcagcggtttgaat 14528360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 13315073 - 13314856
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt-tagtttcgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||||||||  ||  |||| | ||||| ||||||||||| || ||||||||||| ||  ||   |||| |||    
T  13315073 ttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattttataagttgacgatataat 13314974  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaatatt 235  Q
    |||  ||| ||  ||||||  |||||||||||||| ||||||||||  | ||| |||||||  ||||| ||||||||||||||||| ||||||  ||  |    
T  13314973 aaa--agataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaagcaacggttaagattct 13314876  T
Q  236 tcgaatacccctatttatatt 256  Q
    |||||| ||||||||||||||    
T  13314875 tcgaat-cccctatttatatt 13314856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 25182535 - 25182318
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||| | ||||| ||| ||||| ||||||||||| ||||| ||||||||||   ||  ||||||| |||| || ||||   |||| |||    
T  25182535 cggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgtta 25182436  T
Q  112 cttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgca 209  Q
    |||||||| ||||  ||  |||||||||| |||| |||||||||| | ||||||||||||||| ||||||||| |||||| ||||||  ||||| |||||    
T  25182435 cttattttaagttgacgatataaaataaaagagataagggttaga-gattgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttgca 25182338  T
Q  210 gaaaagtaagcagcggttag 229  Q
    |||||| || ||| ||||||    
T  25182337 gaaaaggaaacagtggttag 25182318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 30806604 - 30806436
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcgg-----cagagattgtcgtttcatccaaacaatttg 106  Q
    |||||||| ||||||||||||||| || |  |||||||||||||||||||| |||||||||||       ||  ||||||||||||||||||||||||||    
T  30806604 cggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttg 30806505  T
Q  107 cattacttatttttagttt--cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgt 175  Q
    | ||||||| |||||||||  ||  |||||||||| |||  |||||||||| | |||||||||||||||||    
T  30806504 cgttactta-ttttagtttgacgatataaaataaaagagttaagggttaga-gattgcaatttttatctgt 30806436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 17101990 - 17101896
Alignment:
Q  23 aagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttat 116  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||   || ||||||||||||||||||||||| ||  ||||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttat 17101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 18569192 - 18569262
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||| |||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  18569192 gttgctatttttatctgtttgcaacatagcgagtttacttgttttggttgcagaaaagtaagcagcggtta 18569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 26394644 - 26394562
Alignment:
Q  174 gtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||| ||  ||||||| ||||||||||||||    
T  26394644 gtttgcaacaaagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 5850933 - 5851024
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaat 103  Q
    |||||||| |||||||| | |||| || ||||||||||||||||||||||| |||||||||||  || |||||||||||||| |||||||||    
T  5850933 cggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaat 5851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 6884950 - 6885115
Alignment:
Q  13 cggattagacaagtgtatcaaatcat-taccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||||||  ||||| | |||| |||||||||||||||||| | ||||||||||  ||  |||||||||||| ||||||||| ||||  ||    
T  6884950 cggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagtga-gtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgcta 6885048  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaaggg-ttagacggttgcaatttttatctgtttg 178  Q
    |||||||| |||||   ||||||||||| |||| ||||| |||||   ||||||||||||||||||||    
T  6885049 cttattttaagtttgacgataaaataaa-gagataagggtttagagatttgcaatttttatctgtttg 6885115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 262
Target Start/End: Original strand, 21314636 - 21314865
Alignment:
Q  33 aatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgata 132  Q
    ||||||||||||||||||||||||||||||  ||||||||||  ||| |||| ||||||| | ||||||||   | |||||||||||||||| |   |||    
T  21314636 aatcattaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttatttttagttac-caata 21314734  T
Q  133 aaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaa 231  Q
     |||| | |||  || ||||||| | ||||||| |||||||| || ||| | ||||||||| |||  ||||  || || ||||||||| ||||||||| |    
T  21314735 taatagaagagttaaaggttagaagtttgcaatatttatctgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttagga 21314834  T
Q  232 tatttcgaatacccctatttatattattcga 262  Q
       ||||||| |||||||| ||||| |||||    
T  21314835 gtattcgaatccccctattgatattcttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 24269592 - 24269697
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| ||||| ||| |||||||||||||||| |||||| |||||||||||  ||| |||||||||||| |||||||||||  ||||| |    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatt 24269690  T
Q  114 tattttt 120  Q
    |||||||    
T  24269691 tattttt 24269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 13697893 - 13698055
Alignment:
Q  58 aagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt-cgtgataaaataaacgagaaaagggttagac 156  Q
    ||||| |||||||||||  ||  |||| ||||||| |||||||||  ||| ||||||||||| ||||  ||  |||||||| | |||| ||||||||||     
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttaga- 13697991  T
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcag 222  Q
    | ||||||||||||||| ||||||||| |||||| ||||||  |||| ||||||||||||||||||    
T  13697992 gattgcaatttttatctctttgcaacagagcaag-ttacct-gtttggttgcagaaaagtaagcag 13698055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 19786723 - 19786903
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||||||||| || |||||| || ||||||||||||||||| |||||||||||| ||||   || || ||||||||| ||||||||| | |  |||    
T  19786723 cggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgtta 19786822  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    ||| |||| ||||   |  |||||||||| |||| ||  |||||| | ||| ||||||||||||||||||||| ||||||||    
T  19786823 cttgttttaagttgatgatataaaataaaagagataaaagttaga-gattgtaatttttatctgtttgcaacagagcaagtt 19786903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 24904634 - 24904731
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||||  ||| |||||||||||| || ||||||||  ||||||||||||    
T  24904634 caagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttattt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 23893175 - 23893115
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaa 218  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  23893175 gttgcaatttttatctgtttgcaacaaagcaaatttacctgttttggttgcagaaaagtaa 23893115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 16404038 - 16404109
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||| ||||||||||| ||| | |||||||||||||  ||||||||| ||||||||||||||    
T  16404038 gttgcaatttttatttgtttgcaacagagcgaatttacctattttggctgcagaaaaataagcagcggttag 16404109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 17976611 - 17976717
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||  ||||||||| | ||||||||||||||||||||| |||||||||||  || ||||| ||||||| || | ||| || ||||||    
T  17976611 cggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcatta 17976710  T
Q  112 cttattt 118  Q
    |||||||    
T  17976711 cttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 17101868 - 17101795
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||| |||||||||||||||||||||| |||||||||||||  ||||| ||||| |||||||||||| ||||||    
T  17101868 ggttccaatttttatctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaagcagtggttag 17101795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 30122114 - 30122046
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||||||||||| |||| || ||||| |||||||||| |||||||||||||||||| |||||    
T  30122114 ttgcaatttttatctgtttgtaacagagtaagtt-acctattttggttgcagaaaagtaagcagtggtta 30122046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 14075612 - 14075692
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||| ||||||||||||| | |||||||||  ||  ||||||||||||| ||||||||| ||| ||||||||||    
T  14075612 ttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 24110623 - 24110543
Alignment:
Q  166 ttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccc 246  Q
    |||||||||||||||||| || ||||||| || ||||| |||||||||||||||||| |||||| ||  ||||||| ||||    
T  24110623 ttttatctgtttgcaacagaggaagtttatctgttttggttgcagaaaagtaagcaggggttaggattattcgaatccccc 24110543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 18448639 - 18448540
Alignment:
Q  23 aagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||| ||||||||| ||||||||||||||| |||| || || ||||||||   ||||||||||||||  |||||||||||  | |||||||||||||    
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24110763 - 24110700
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||  |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  24110763 gcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatc 24110700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 7983720 - 7983813
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttat 253  Q
    ||||||||||||||||||||| |||||||||| || |||  |||| ||||||||||||||||| ||| ||| ||  || |||| |||||||||||    
T  7983720 ttgcaatttttatctgtttgcgacatagcaag-ttgcctggtttggttgcagaaaagtaagcaacgggtaggattctttgaatccccctatttat 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 30122261 - 30122156
Alignment:
Q  13 cggattagacaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| ||||||| || ||||||||||||||| |||||| |||||| ||||  ||  ||||||| |||  ||||||||||| ||||||    
T  30122261 cggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcatta 30122163  T
Q  112 cttattt 118  Q
    |||||||    
T  30122162 cttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 24269734 - 24269822
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttagaatatttcgaatacccc 246  Q
    |||||||| ||||||||||||||||| || | |||||||| |||| | ||||||||||||||||||||||||| ||  ||||||| ||||    
T  24269734 gttgcaatctttatctgtttgcaacagagta-gtttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaatccccc 24269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 26615339 - 26615287
Alignment:
Q  22 caagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  26615339 caagtgtatcaaatcgttaccaactaataaagtgataagtagagtattgtatc 26615287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 25226158 - 25226237
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||||||||  ||||||||||   ||| |||| | ||||| |||||||||||||| |||| ||||||||    
T  25226158 caagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatattttta 25226237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 24723520 - 24723486
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||||||||||||||||||||||||||||||    
T  24723520 accaagtaataaagtgataagtaaagtatcgtatc 24723486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 26008019 - 26008077
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatc 26008077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 27659468 - 27659526
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaaca 101  Q
    |||||||||||||||||||| |||||||||||  ||  |||||||||||| ||||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaaca 27659526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 30783822 - 30783772
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcg 88  Q
    ||||||||||||||||||||||||| |||||||||||  || |||||||||    
T  30783822 ttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 2637620 - 2637697
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    ||||||||||||||||||||| |||||||||||  ||  |||||||||||| || |||||| |  | |||||||||||    
T  2637620 caagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 14628371 - 14628448
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttc 92  Q
    ||||| ||||| || ||||||||| ||||||||||||  ||||||||||| ||| ||||| ||||| |||||||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaaatattgtatccgcagatattgtcgtttc 14628448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 17509266 - 17509347
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||||||||||| |||||| ||||  ||  ||||||  |||| |||||||||||  | |||||||||||||    
T  17509266 accaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttattttta 17509347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 14626154 - 14626238
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||  |||||||||||||| |||||| |  | |||| |||||||| |||| | ||||||||||||||||||| |||||    
T  14626154 aagggttagagagttgcaatttttatgtgtttggattagagcatgtttacctttttttggttgcagaaaagtaagcagcagttag 14626238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 17509383 - 17509447
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagc 223  Q
    |||||||||| | |||||||||| | ||||||||||||| ||||  ||||| |||||||||||||    
T  17509383 ttgcaattttcacctgtttgcaatagagcaagtttacctgtttttgttgcaaaaaagtaagcagc 17509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 27659571 - 27659642
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggtt 227  Q
    |||||||||||| |||| ||||||| | |||||||||||||  ||||  |||||||||| ||||||||||||    
T  27659571 ggttgcaattttaatctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcggtt 27659642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 15238794 - 15238896
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| ||||||||||||||  || ||||||||| ||| ||||||||| | |||||||||  ||   ||||||||||| || |||||||| || ||||||    
T  15238794 attaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttactt 15238893  T
Q  115 att 117  Q
    |||    
T  15238894 att 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 18448502 - 18448433
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||| ||||||||||||||||||| |||||| ||||||  ||||| ||||| ||||||||||| ||||||    
T  18448502 ttgcagtttttatctgtttgcaacagagcaag-ttacctgtttttggttgcataaaagtaagcaacggtta 18448433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 17972173 - 17972237
Alignment:
Q  22 caagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtc 87  Q
    |||| ||| |||||||||| |||||||||||||| |||||| ||||||||||| |||  |||||||    
T  17972173 caagcgtaccaaatcattatcaagtaataaagtg-taagtagagtatcgtatccgcatggattgtc 17972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 19264168 - 19264237
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggt 226  Q
    |||| ||||||||||| ||||||||| |||||||||| ||| ||||| ||| | ||| ||||||||||||    
T  19264168 gttgtaatttttatctttttgcaacagagcaagtttatctatttttggttgaaaaaaggtaagcagcggt 19264237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 31288376 - 31288436
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaa 99  Q
    |||||||||||||||||| ||||||||||||||||||   || ||||||| ||||| |||||    
T  31288376 ttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttcaaccaaa 31288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 24644856 - 24644935
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||||||||||| |||||| ||||| |||||  ||  |||| ||||||  |||||| |||| |||||||||||||    
T  24644856 ttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 262
Target Start/End: Original strand, 69073 - 69323
Alignment:
Q  12 gcggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||  || ||||||||  ||  |||||||  ||  |||||||||||||||||     
T  69073 gcggattaggcaagtgtaccaaatcattaccaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattg 69172  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctatt-ttgcttgcag 210  Q
    ||||||||||| ||    ||| ||||||||||  |||||||| |   ||||||||||||||||||||||||| || |||||||||| || || | |||||    
T  69173 cttatttttag-ttgacaatataataaacgag-taagggttatagaattgcaatttttatctgtttgcaacagagaaagtttacctgttcttacatgcag 69270  T
Q  211 aaaagtaagcagcggttagaatatttcgaatac-ccctatttatattattcga 262  Q
    |||| |||||||||||||| ||  || |||| | | |||||||||||||||||    
T  69271 aaaaataagcagcggttaggattcttagaattcacactatttatattattcga 69323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 259
Target Start/End: Complemental strand, 27737796 - 27737549
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||||||  ||||| || ||||||||||||||||||||||| |||||| || |  ||  |||||| ||||| ||||||||||| || |||    
T  27737796 cggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgtta 27737697  T
Q  112 cttattttt--agtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    |||||||||  |  ||   |||||||| ||  ||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||  |||||    
T  27737696 cttatttttgtaagttgacgataaaatgaa--agataagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgttgca 27737599  T
Q  210 gaaaagtaagcagcggttagaatatttcgaatacccctatttatattatt 259  Q
     ||||||||||||||||||| ||  ||||||| | ||  |||||||||||    
T  27737598 aaaaagtaagcagcggttaggattcttcgaatcctccattttatattatt 27737549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 9516784 - 9516988
Alignment:
Q  20 gacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||| |||||| || ||| ||||||||||||||||||| |||||||||||  ||  |||||||||||| ||||||||| | || ||||||||||    
T  9516784 gacaagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattt 9516883  T
Q  119 ttagtttcgtgataaaataaacgagaaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagta 217  Q
    || ||    |||  | ||||| || ||||||||||||  ||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  9516884 tt-gtaagttgacgatataaaagataaaagggttagaaaggttgtaagttttatctgttagcaacatagcaagtttacctattttgattgcagaaaatta 9516982  T
Q  218 agcagc 223  Q
    ||||||    
T  9516983 agcagc 9516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 12183439 - 12183185
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||  |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| ||| |||||||  | ||    
T  12183439 gcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgtt 12183340  T
Q  111 acttatttttagttt-cgtgataaaataaacgagaa-aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgc 208  Q
    ||||||||| || |  ||  |||||||||| |||   || ||||||| | ||||||| |||||||||||||||||||||||||| |||| ||||| || |    
T  12183339 acttattttaaggtgacgatataaaataaaagagtttaaaggttaga-gattgcaatgtttatctgtttgcaacatagcaagtt-acctgttttggttac 12183242  T
Q  209 agaaaagtaagcagcggttagaatatttcgaatacccctatttatattattcgacat 265  Q
    ||||||||||||| ||||||| ||  ||||||| |||||||||||||| || |||||    
T  12183241 agaaaagtaagcaacggttaggattcttcgaatccccctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 230
Target Start/End: Complemental strand, 22410408 - 22410218
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||| ||||||||| |||||||||||  ||| |||||||||||||| |||||||||  | |||||||||||||  ||   |||| ||||    
T  22410408 ttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataata 22410309  T
Q  138 aacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttaga 230  Q
    ||  ||| ||||||||||   ||||||||||||||||||||||||| ||||||||| |||| ||||| |||||| |||| ||||||||| ||||    
T  22410308 aa--agataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcag-aaaggaagcagcggctaga 22410218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 241
Target Start/End: Complemental strand, 23844546 - 23844343
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||| ||||||||| |||||| ||||   || |||||||||||| ||||||||| | || |||||||||||| ||    |||  | |||    
T  23844546 ttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttattttt-gtaagttgacgatata 23844448  T
Q  138 aacgagaaaagggttagacg-gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatattt 236  Q
    || || ||||||||||||   |||||||||||||||||||||||| | | ||||||||||| ||||| ||||| ||||||||||||||||||| || |||    
T  23844447 aaagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctgttttggttgcataaaagtaagcagcggttaggattttt 23844348  T
Q  237 cgaat 241  Q
    |||||    
T  23844347 cgaat 23844343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 4339728 - 4339940
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    |||||||||||||||| |||||  || | ||| ||||||||||||||||| ||||| |||||  ||  |||||||||||  ||||| ||||| |||||||    
T  4339728 ggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattac 4339827  T
Q  113 ttatttttagttt--cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    ||| |||||||||  ||  |||||||||| |||| |||||||||| | || |||| ||||| ||||||||||  |||||| |||||| ||||| ||||||    
T  4339828 tta-ttttagtttgacgatataaaataaaagagataagggttaga-gattacaatatttatttgtttgcaactaagcaag-ttacctgttttggttgcag 4339924  T
Q  211 aaaagtaagcagcggt 226  Q
    |||||||| |||||||    
T  4339925 aaaagtaaccagcggt 4339940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 8241269 - 8241505
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || || |||||| ||||||||||||| |||||||||||  || || ||| |||||  |||||||||||  |||||    
T  8241269 cggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccaca-aggttg-cgttttgtccaaacaattcacatta 8241366  T
Q  112 cttatttttagtttcgtgata--aaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    |||||||| ||||||  ||||  ||||||| |||  ||| |||||| | |||||||||||||||||||||||||||||||| ||||||  |||| ||| |    
T  8241367 cttatttt-agtttcacgatataaaataaaagagttaagagttaga-gattgcaatttttatctgtttgcaacatagcaag-ttacct-gtttggttgta 8241462  T
Q  210 gaaaagtaagcagcggttagaatatttcgaatacccctatttat 253  Q
    |||||||||||||| |||||| | ||| |||| |||||||||||    
T  8241463 gaaaagtaagcagcagttagact-ttttgaatccccctatttat 8241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 9726014 - 9726120
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  |||||||||||| |||||||||||||| |||    
T  9726014 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgtta 9726113  T
Q  112 cttattt 118  Q
    |||||||    
T  9726114 cttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 28933733 - 28933587
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttc-gtgataaaataaacgaga 144  Q
    ||||||||||||||||| |||||||||||  ||  |||| ||||||| |||||||||||||  || |||||||| ||||   |  |||||||||| ||||    
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttattttaagttgatgatataaaataaaagaga 28933634  T
Q  145 aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
     |||||||||| | ||||||||||||||||||||||||| ||||||||    
T  28933633 taagggttaga-gattgcaatttttatctgtttgcaacagagcaagtt 28933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 232
Target Start/End: Complemental strand, 17827168 - 17826983
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaataaacga 142  Q
    |||||||||||| |||| || |||||||||||  ||  |||||||||||| ||||||||||| || ||||||||||||  |||   || || |||||  |    
T  17827168 aagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttatttttttttt---gacaatataaa--a 17827074  T
Q  143 gaaaagggttagacg-gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaat 232  Q
    || |||||||| | | |||||||||||||| ||||||||||||||| ||||||| |  ||||| ||||||||||||||||| ||||||||||    
T  17827073 gataagggttaaaagagttgcaatttttatatgtttgcaacatagc-agtttacttgtttttggttgcagaaaagtaagcaacggttagaat 17826983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 25781914 - 25781975
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaa 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  25781914 ggttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgcagaaaagtaa 25781975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 14079420 - 14079320
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttagaatatttcgaa-tacccctatttatat 255  Q
    |||||||||||||||||||||||||| || |||||| |||| ||||| || |||||||||||||||||||||||||  |||||| | |||||||||||||    
T  14079420 gttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatat 14079321  T
Q  256 t 256  Q
    |    
T  14079320 t 14079320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 24657430 - 24657347
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaat 241  Q
    |||| ||||||||||||||||||||| ||| | ||||||| ||||| ||||||||||||||||||||||||||||  |||||||    
T  24657430 gttgaaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttagaattcttcgaat 24657347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 15466362 - 15466579
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || |||||||||||||||| || ||| |||||||||||   || ||||||| |||| || |||||||| || |||    
T  15466362 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgtta 15466460  T
Q  112 cttatttttagttt---cgtgataa-aataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttg 207  Q
     |||||||  ||||   ||  |||| |||||| |||  |||||||||| | |||||| |||||||||||||||||| |||||| ||||||| |||| |||    
T  15466461 gttatttt--gttttaacgatataataataaaagagttaagggttaga-gattgcaaattttatctgtttgcaacagagcaag-ttaccta-tttggttg 15466555  T
Q  208 cagaaaagtaagcagcggttagaa 231  Q
    ||||||||||| ||||||||||||    
T  15466556 cagaaaagtaaacagcggttagaa 15466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 21907424 - 21907642
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||| || |||||| || |||||||||||||||||||||||||||||||||||  ||  |||||||||||| |||||| || | || |||    
T  21907424 cggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgtta 21907523  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgc--aatttttatctgtttgcaacatagcaagtttaccta-ttttgcttg 207  Q
    |||| ||| ||||   |  |||||||||| |||| ||||||||||   || |  ||||||||||||||||||||| |||||| ||| ||| ||||| |||    
T  21907524 cttaatttaagttgatgatataaaataaaagagataagggttaga-aattacataatttttatctgtttgcaacagagcaag-ttagctatttttggttg 21907621  T
Q  208 cagaaaagtaagcagcggtta 228  Q
    || ||||| || |||||||||    
T  21907622 caaaaaaggaaacagcggtta 21907642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 23143713 - 23143806
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||||  ||| |||||||||||| |||||||||||    
T  23143713 gcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 22813680 - 22813612
Alignment:
Q  160 tgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||    
T  22813680 tgcaatttttatttgtttgcaacaaagcaagtttacctgttttggttgcagaaaagtaagtagcggtta 22813612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 229
Target Start/End: Complemental strand, 23645848 - 23645658
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt-agtttcgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||||||||   || |||||||||||| |||||||||||  | ||| |||||||| |        |||||||    
T  23645848 ttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaacaataaaataaaat 23645749  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||| |||   ||||||||| | ||||||||||||| ||||||||||| |||||| |||| | ||||| ||||| |||||||||||| ||||||    
T  23645748 aaaagagttgagggttaga-gattgcaatttttatttgtttgcaacagagcaag-ttacatgttttggttgcataaaagtaagcagtggttag 23645658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 27124452 - 27124386
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||| ||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||    
T  27124452 caatttttatatgtttgcaacagagcaagtttacctgtcttggttgcagaaaagtaagcagcggtta 27124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 17382214 - 17382275
Alignment:
Q  166 ttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtt 227  Q
    |||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatgttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 17729143 - 17729232
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaac 100  Q
    |||||||||  ||||||| |||||| || ||||||||||||||||||||||| |||||||||||  || ||||||||||||| |||||||    
T  17729143 gcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaac 17729232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 21672543 - 21672316
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||| | |||||| || ||||||||||||||||||||||| |||||||||||  ||  |||| || |||| ||||||||||| |  ||    
T  21672543 gcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgtt 21672444  T
Q  111 acttatttttagtttcgtgataaaataa-acgag-aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgc 208  Q
    |||| ||||||| ||   |||||||||| | |||  ||||| |||||   ||||||||||||||| ||||||||  |||||| |||||| ||||  ||||    
T  21672443 acttttttttag-ttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaag-ttacctgttttcgttgc 21672346  T
Q  209 agaaaagtaagcagcggtta-gaatatttc 237  Q
    | |||||||||  ||||||| |||||||||    
T  21672345 ataaaagtaagtggcggttaggaatatttc 21672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 24475179 - 24475264
Alignment:
Q  145 aaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||  ||||||||| ||||||||||||||||| | ||||||||||| ||||| ||||||||||||||| || ||||||    
T  24475179 aaagggttagaaaggttgcaatctttatctgtttgcaacaaaacaagtttacctgttttggttgcagaaaagtaagtagtggttag 24475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 7543067 - 7542962
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||| ||||||||||  || |||||||||||||||||||||||||||||||||||      || ||| ||||||||||||||||| || |||    
T  7543067 cggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgtta 7542968  T
Q  112 cttatt 117  Q
    ||||||    
T  7542967 cttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 11176942 - 11177122
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| | |||| || ||| |||| |||||||||||||| |||||||||||  ||  | |||||||||| || ||| |||| |  |||    
T  11176942 cggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgtta 11177041  T
Q  112 cttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||||| | ||  ||  |||||||||| |||| ||||||||||   |||||||||||||  |||||||||||||||||||    
T  11177042 cttattttaaattgacgatataaaataaaagagataagggttagaaa-ttgcaatttttataagtttgcaacatagcaagtt 11177122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 21679959 - 21679732
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||| | |||||| || || |||||||||||||||||||| |||||||||||  ||  |||| || |||| ||||||||||| |  ||    
T  21679959 gcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgtt 21679860  T
Q  111 acttatttttagtttcgtgataaaataa-acgag-aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgc 208  Q
    |||| ||||||| ||   |||||||||| | |||  ||||| |||||   ||||||||||||||| ||||||||  |||||| |||||| ||||  ||||    
T  21679859 acttttttttag-ttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaag-ttacctgttttcgttgc 21679762  T
Q  209 agaaaagtaagcagcggtta-gaatatttc 237  Q
    | |||||||||  ||||||| |||||||||    
T  21679761 ataaaagtaagtggcggttaggaatatttc 21679732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 17299912 - 17299832
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||||||||||| ||||||||||     | |||||||||||  |||||||||||||| ||||||||||    
T  17299912 ttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 19244603 - 19244667
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaa 102  Q
    ||||||||||||||||||||||||| ||||||| |||   ||||||||||||||| |||||||||    
T  19244603 ttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 5624658 - 5624849
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtat-cggcagagattgtcgtttcatccaaacaatttgcattacttattttt---agtttcgtgataa 133  Q
    ||||||||||||||||||||||||| |||||| ||| |   ||||||||||||||  | |||||||||||| ||||||||||||   |||||   ||||     
T  5624658 ttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgtaagtttgacgatag 5624757  T
Q  134 aataaacgagaaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    || |     |  ||||||||||  |||||||||||||||||||||| || | |||| |||||||   ||||| |||||||||||||||||||||||||    
T  5624758 aaaa-----gttaagggttagaaaggttgcaatttttatctgtttgtaatagagca-gtttaccggcttttggttgcagaaaagtaagcagcggttag 5624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 22567832 - 22568044
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||  || |||||||||||| |||| ||||| ||||| |||||  ||  |||||| ||||| ||||||||| |  | |||    
T  22567832 cggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgtta 22567931  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| ||||  ||  |||||||||| | |  |||||||||| | ||| || |||||||||||||||||| ||  || ||||||| |||| ||||||    
T  22567932 cttattttaagttaacgatataaaataaaagggttaagggttaga-gattgtaa-ttttatctgtttgcaacagagtcag-ttacctagtttggttgcag 22568028  T
Q  211 aaaagtaagcagcggt 226  Q
    ||||||||||| ||||    
T  22568029 aaaagtaagcaacggt 22568044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 9838380 - 9838556
Alignment:
Q  44 agtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt--cgtgataaaataaacg 141  Q
    ||||||||||||||||||| ||||| |||||  ||  ||||||| |||  |  |||||| | || ||||||||||| |||||  ||  |||||||||| |    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt-agtttgacgatataaaataaaag 9838478  T
Q  142 agaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    ||  ||| |||||| | ||| ||||||||||||||||||| | |||||| |||||  ||||| |||||||||||||||||    
T  9838479 agtgaagcgttaga-gattgtaatttttatctgtttgcaaaagagcaag-ttacccgttttggttgcagaaaagtaagca 9838556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 14637012 - 14637104
Alignment:
Q  165 tttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttatatt 256  Q
    |||||||||  || ||||| ||||||||||||| |||| | ||||||||||||||||||||  ||| ||  ||||||| ||||||||||||||    
T  14637012 tttttatcttattacaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaatccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 22566122 - 22566052
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||   |||| ||||||| ||||| ||| |||||||||||||||||||||    
T  22566122 ttgcaatttttatctgtttgcaacactacaag-ttacctatttttgattgtagaaaagtaagcagcggttag 22566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 20005879 - 20005809
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||| ||||||||||| ||| |||||||||  ||||| ||||||||| ||| ||||||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggtta 20005809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 21688876 - 21688790
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt 124  Q
    |||| ||||||| |||||||||||| ||||| |||||   || |||||||||| |||||||| |||| || ||||||||||| ||||    
T  21688876 ttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttattttgagtt 21688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 27124573 - 27124491
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||||||||||||| || | |||||||||| ||  ||||||||||||   |||||||||  | ||||||||||||    
T  27124573 ttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttattttt 27124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 9898920 - 9898854
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||||||||||| | | |||||| |||||||||| |||||||||||||| |||||||||    
T  9898920 ttgcaatttttatctgtttgcaa-agaacaagtt-acctattttggttgcagaaaagtaa-cagcggtta 9898854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 25927410 - 25927305
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||| | || ||||||||||||||||||||||| | |||||||||  ||  |||| | ||||| |||||||||||  | |||    
T  25927410 cggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgtta 25927311  T
Q  112 cttatt 117  Q
    ||||||    
T  25927310 cttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 20005979 - 20005899
Alignment:
Q  20 gacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaa 99  Q
    |||||||||| |||||| || ||||||||||||||||||||| | |||||||||||  ||  |||| ||||||| ||||||    
T  20005979 gacaagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 20145083 - 20145015
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggt 226  Q
    ||||||||||||| ||||||||||| || |||||||| || ||||  ||||||||||| ||||||||||    
T  20145083 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggt 20145015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 21841662 - 21841610
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    |||||||||||||||||| |||||||| ||||||||||| | ||||| |||||    
T  21841662 ggttgcaatttttatctgattgcaacaaagcaagtttacttgttttggttgca 21841610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 22187756 - 22187824
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggt 226  Q
    ||||||||||||| ||||||||||| || |||||||| || ||||  ||||||||||| ||||||||||    
T  22187756 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggt 22187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 18075469 - 18075382
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttg-cattacttatttttagtt 124  Q
    ||||||||||||||||||||||| | |||||||||||  |   |||||||||||  |||||||||| ||   ||||||||||||||||    
T  18075469 ttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatctgagtttacttatttttagtt 18075382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 22413023 - 22412952
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||| ||||||||||||| |||| ||| | ||||||| ||||| || ||| |||||||| |||||||||    
T  22413023 gttgcaacttttatctgtttgtaacagagcgaatttacctgttttggttacaggaaagtaagtagcggttag 22412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 28586133 - 28586046
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaat 103  Q
    |||||||||| || |||||| || ||| ||||||||| ||||||||| |||||| ||||| ||  ||||||||||||| | |||||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaat 28586046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 1635110 - 1635170
Alignment:
Q  168 ttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||| |||||| |||| | ||||| ||| |||||||||| ||||||||||    
T  1635110 ttatctgtttgcaacaaagcaag-ttacatgttttggttgtagaaaagtaaacagcggttag 1635170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 14079548 - 14079491
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgta 72  Q
    ||||| |||||||| |||||| || ||||||| ||||||||||||||| |||||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 21932133 - 21932100
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgt 71  Q
    ||||||||||||||||||||||||| ||||||||    
T  21932133 ttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 20002480 - 20002440
Alignment:
Q  22 caagtgtatcaaatca-ttaccaagtaataaagtgataagt 61  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  20002480 caagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 20145166 - 20145106
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtat 73  Q
    ||||||| |||||||| |||||  || ||||||||||||||||||||||| ||||| ||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 22187673 - 22187733
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtat 73  Q
    ||||||| |||||||| |||||  || ||||||||||||||||||||||| ||||| ||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 22566243 - 22566207
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  22566243 ttaccaagtaataaagtgataagtagagtatcatatc 22566207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 24252186 - 24252131
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaag 219  Q
    ||||||||||||||||||||| ||||||||| | | ||||| ||||||||| |||||    
T  24252186 aatttttatctgtttgcaacagagcaagttt-cgtgttttggttgcagaaatgtaag 24252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 36076 - 35857
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    |||| |||||||||||||||||||| |||||||||||  ||   |||||||||||||||||| |||| |  ||||||||||| |||||   |||||||||    
T  36076 ttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattttaagtttgacgataaaata 35977  T
Q  138 aacgaga-aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttagaatatt 235  Q
     | |||  |||||||||||   ||||||||||||||| |||| |||| || ||||| |||| |||||| ||||||||||||||||||||||||| ||  |    
T  35976 taagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagtt-acctgattttggttgcagaaaagtaagcagcggttaggattct 35878  T
Q  236 tcgaatacccctatttatatt 256  Q
    | |||| ||||||||||||||    
T  35877 tagaatccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 17359153 - 17359398
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    ||||||||| |||||||| |||||| || ||||||||||||||||||||||  |||||| ||||   | ||||||||||||| |||||| ||||  | ||    
T  17359153 gcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgtt 17359252  T
Q  111 acttatttttagtttcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgca 209  Q
    |||||||||||| ||   |||| ||||||  ||| ||||||||||  ||||||||||||||||| | |||||||||||| |||||||  ||||| |||||    
T  17359253 acttatttttaggttgacgatataataaa--agataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgca 17359350  T
Q  210 gaaaagtaagcagcggttagaatatttcgaataccc-ctatttatatt 256  Q
     |||||||||  |||||||| ||  ||||||| ||| |||||||||||    
T  17359351 taaaagtaagatgcggttaggattcttcgaatcccctctatttatatt 17359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 12208619 - 12208840
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||||||||||||| | |||| ||||  ||  |||||||||||| ||||||||||| || |||||||||||| ||    |||  | |||    
T  12208619 ttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattttt-gtaagttgacgatata 12208717  T
Q  138 aacgagaaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatattt 236  Q
    || || ||||||||||||  |||| || |||| |||||||||||||| ||||||||||||| ||||   |||||||||||||||||||||||| ||  ||    
T  12208718 aaagataaaagggttagaaaggtttcagttttaatctgtttgcaacagagcaagtttacctgttttagctgcagaaaagtaagcagcggttaggattctt 12208817  T
Q  237 cgaat-acccctatttatattat 258  Q
    |||||  ||||||||||||||||    
T  12208818 cgaatcccccctatttatattat 12208840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 9787986 - 9787767
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| ||||||||| | ||||||||||||||||||||| |||||||||||   | | ||||||||||| || |||||| |   ||||    
T  9787986 cggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaactccaatta 9787887  T
Q  112 cttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgca 209  Q
    |||||||| |||||  |  |||||||| | ||||||||||||||| | |||||||||| | |||||||||||| |||||| | ||||  ||||| |||||    
T  9787886 cttattttaagtttatgatataaaatagaagagaaaagggttaga-gattgcaattttgaactgtttgcaacagagcaag-tgacctgtttttggttgca 9787789  T
Q  210 gaaaagtaagcagcggttagaa 231  Q
    ||||||||||  ||||||||||    
T  9787788 gaaaagtaagttgcggttagaa 9787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 13345417 - 13345200
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||||||||||||| |||||| ||||  ||  |||||||||||  ||||||||||| || |||||||||| ||||||   |||||||||    
T  13345417 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaata 13345318  T
Q  138 aacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttc 237  Q
    || |||  || ||||| |   ||||| ||||||||| |||  |||||||||   |||||| ||||| ||  |||||||||| |||||||||| || ||||    
T  13345317 aaagagttaaaggttaaagatttgcagtttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaaacagcggttaggatttttc 13345220  T
Q  238 gaat-acccctatttatatt 256  Q
    ||||  ||||||||||||||    
T  13345219 gaatcccccctatttatatt 13345200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 15544064 - 15543839
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttat--tt 118  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  | || ||||||||||| ||||||||||| |  ||||||||  ||    
T  15544064 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattttt 15543965  T
Q  119 ttagtttcgtgataaaataaacgagaaaagggttagacg-gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagt 216  Q
    ||| ||   |||  | |||||  ||| |||||||| | | |||||||||||||| |||||||||||||| ||||||||||  ||||  ||||||||||||    
T  15543964 ttaatt---tgacgatataaa--agataagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagt 15543870  T
Q  217 aagcagcggttagaatatttcgaatacccct 247  Q
    ||||| ||||||| ||  ||||||| |||||    
T  15543869 aagcaacggttaggattcttcgaatccccct 15543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 256
Target Start/End: Original strand, 9401526 - 9401742
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt--agtttcgtgataaaa 135  Q
    |||||| ||||||||||   ||||| |||||||||||  ||   ||||||||||| ||||||||||| || ||||||||||||  |  ||  ||||| ||    
T  9401526 ttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataa 9401622  T
Q  136 taaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatt 235  Q
    ||||  ||| || |||||||  |||||||||||||||||||||||||| || |||||||||| ||||| || || ||||||||| ||||||||| ||  |    
T  9401623 taaa--agataacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctgttttggttacaaaaaagtaagtagcggttaggattct 9401720  T
Q  236 tcgaataccc-ctatttatatt 256  Q
    |||||| ||| |||||||||||    
T  9401721 tcgaatcccctctatttatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 51473950 - 51473780
Alignment:
Q  45 gtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcg-tgataaaataaacgag 143  Q
    |||||||||||||||||| |||||||||||   |  |||||||||||  |||||||||||||| |||||| |||||||  |||   |||||||||| |||    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgtttttag--tcgacaataaaataaaagag 51473853  T
Q  144 -aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagt 216  Q
      ||| |||||||   ||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||    
T  51473852 ttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaag-ttatctattttggttgcagaaaagt 51473780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 29242541 - 29242715
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaataaacg 141  Q
    ||||||||||||||||||||| |||||||||||   || |||||||||||||||||||||||| || |||| |||||||      ||    || |  |||    
T  29242541 caagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattttt------gt----aagttgacg 29242630  T
Q  142 agaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    | | ||  |||||   |||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| |||||||||    
T  29242631 atataaaagttag---gttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcaaaaaagtaagaagcggttag 29242715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 17610356 - 17610146
Alignment:
Q  20 gacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||| |||||| || ||||||||||||||| ||||||| |||||||||||  ||  |||||||||||| |||||||||||  | ||||||||||    
T  17610356 gacaagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17610257  T
Q  119 tt---agtttcgtgataaaataaacgagaaaagggttag-acggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaa 213  Q
    ||   ||||   |||  | |||||  ||  || |||||| | | ||| ||||||||| ||||||||||| |||||||||||||  ||||| |||||||||    
T  17610256 ttgtaagtt---tgacgatataaa--agttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcagaaa 17610162  T
Q  214 agtaagcagcggttag 229  Q
    ||||||||||||||||    
T  17610161 agtaagcagcggttag 17610146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 22664224 - 22664415
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt-cgtgataaaat 136  Q
    ||||||||||||||||||||||||| |||||| ||||  | | |||| || |||| || |||||| | || || |||||||| ||||  ||  |||||||    
T  22664224 ttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgcttattttaagttgacgatataaaat 22664323  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||| |||| |||||||||    ||||||||||||| |||||| |||| |||||||| || | ||||| ||||||||||||||| |||||||||    
T  22664324 aaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaagtt-acatgttttggttgcagaaaagtaagtagcggttag 22664415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 23038117 - 23037939
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| |||||||| |||||| || |||||||||||||||||||||| | ||||||||||  ||  |||||||||||| || |||||| |  | ||||    
T  23038117 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtga-gtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttac 23038019  T
Q  113 ttatttttagtttcgtgataaaataaacgagaaaagggtt-agacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    ||||||| |||||  |||||||||||| |||| || |||| |||   || |||||||| ||||||||||||||||||||||    
T  23038018 ttattttaagtttgatgataaaataaaagagataatggttgaga-aattacaatttttttctgtttgcaacatagcaagtt 23037939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 228
Target Start/End: Complemental strand, 31236129 - 31235940
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    |||| |||||||||||||||||| | |||||  ||||  || ||||||||||||  |||||| |||| || |||||||||||||  ||   |||| ||||    
T  31236129 ttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 31236030  T
Q  138 aacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggtta 228  Q
    ||  | | ||||||||||  |||||||||||||||| ||||||||| ||||||||||| |  ||||| ||||| ||||||||||| ||||||    
T  31236029 aa--atataagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagcaacggtta 31235940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 16179144 - 16179215
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  16179144 ttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttag 16179215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 14779566 - 14779766
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| ||||||||| |||||||||||| ||||||| || |||||| ||||  ||| |||||||||||| ||||||||  | || ||| ||||||||    
T  14779566 caagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattttt 14779665  T
Q  121 agtttcgtgataaaataaacgagaaaagggttag-acggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaag 219  Q
     ||    |||  | |||||  |||||| |||||| | ||||||||||||||| ||||| ||||||| ||||||||| | ||||| ||| |||||||||||    
T  14779666 -gtaagttgacgatataaaaaagaaaaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttgttttggttgaagaaaagtaag 14779764  T
Q  220 ca 221  Q
    ||    
T  14779765 ca 14779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 18100973 - 18100905
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||    
T  18100973 ttgcaatttttatctgtttgcaacatagcaag-ttacatgttttggttgcagaaaagtaagcagcggtta 18100905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 16069518 - 16069436
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaataccc 245  Q
    |||||||||||| |||||||| ||||||||||||| ||||| ||| ||||||||||||||| ||||| ||  |||||||||||    
T  16069518 aatttttatctgcttgcaacagagcaagtttacctgttttggttgtagaaaagtaagcagcagttaggattcttcgaataccc 16069436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 25405711 - 25405629
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||||||||||||||||||||||||||||  ||  |||||||||||| |||||||| ||  | ||||||||||||    
T  25405711 ttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattttt 25405629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 33190669 - 33190885
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||| ||||| |||||| || | ||||||||||| ||||||||| |||||  ||||  ||   |||||||||||||| |||||| | |  |||    
T  33190669 cggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgtta 33190768  T
Q  112 cttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcag 210  Q
    |||||||| ||||  ||  ||||||||||  ||  |||| ||||| | ||| ||||||||| |||||||||||  ||||||| ||||  |||| ||||||    
T  33190769 cttattttaagttgacgatataaaataaaatagttaaggtttaga-gattgtaatttttatttgtttgcaacagtgcaagtt-acctggtttgattgcag 33190866  T
Q  211 aaaagtaagcagcggttag 229  Q
    |||||||||||||||||||    
T  33190867 aaaagtaagcagcggttag 33190885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 21449080 - 21449189
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatt 110  Q
    |||||| || |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||  ||||||||||||  |||||||||||   ||    
T  21449080 gcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgtt 21449179  T
Q  111 acttattttt 120  Q
    ||||||||||    
T  21449180 acttattttt 21449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16787833 - 16787725
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||| | |||||||| || | ||||||||||||||||||||| ||||||||||   || ||||||||||||   ||||||||||||| |||    
T  16787833 cggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgtta 16787734  T
Q  112 cttattttt 120  Q
    |||||||||    
T  16787733 cttattttt 16787725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 21449218 - 21449286
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||||||||||| ||  |||||  ||||||||||||||||||||||||    
T  21449218 caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaagtaagcagcggttag 21449286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 18736338 - 18736239
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || | |||||||||||||||||||||  ||||||||||  ||| |||||||||||| | |||||||||| | ||||||||||||    
T  18736338 caagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattttt 18736239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 21334813 - 21334718
Alignment:
Q  26 tgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||| | ||  |||||| |||| |||||||||||  | ||||||||||||    
T  21334813 tgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttattttt 21334718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 21988080 - 21987981
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||| ||||||||||||||||| |||||||||||  | ||||||||| |||| ||||| ||||| || ||||||||||||    
T  21988080 caagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattttt 21987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 24281295 - 24281449
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtt-tcgtgataaaat 136  Q
    ||||||||||||||||||||||||| | |||| ||||  ||  |||| ||||||  ||| |||||||||| ||||||||||| ||||  |   |||||||    
T  24281295 ttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttacttattttaagttgacaatataaaat 24281394  T
Q  137 aaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    ||| ||| ||||||||||| | ||||||||| |||||||||| |||| || |||||    
T  24281395 aaaagagtaaagggttaga-gattgcaatttctatctgtttgaaacagagaaagtt 24281449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 3591760 - 3591654
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||||||  ||||| || | |||||||||||||||||| || |||||||||||  || ||||||||||||  ||||||||||| || |||    
T  3591760 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgcctta 3591661  T
Q  112 cttattt 118  Q
    |||||||    
T  3591660 cttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 18736215 - 18736145
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggt 226  Q
    |||||||| |||||||||||||||| | |||||||||||||| ||||| ||||||||||||| ||||||||    
T  18736215 ggttgcaaattttatctgtttgcaatagagcaagtttacctatttttggttgcagaaaagtaggcagcggt 18736145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 22623029 - 22623099
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||| |||||||| | ||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  22623029 ttgccatttttatatatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagctgttag 22623099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 21666687 - 21666606
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| |||||||||||  | |||||||||||||    
T  21666687 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttattttta 21666606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 23179922 - 23179990
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggt 226  Q
    |||||||||||||||||||| ||| ||| ||| ||||||| ||||| ||| ||||||||||||||||||    
T  23179922 gttgcaatttttatctgtttacaaaataacaattttaccttttttggttggagaaaagtaagcagcggt 23179990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 24306386 - 24306307
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||||||||||| |||||||||||  ||| ||||| ||||||| ||||| |||| || ||||||||||    
T  24306386 ttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 727592 - 727663
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||| |||||||||||||| || ||||||| ||||| |||||||||   ||||||||||||    
T  727592 ggttgcaatttttatttgtttgcaacatagaaaatttacctgttttggttgcagaaagtaaagcagcggtta 727663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 12012785 - 12012680
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaataccc 245  Q
    |||||||||| | ||||||||||||| ||||||||||||||| || |||||| ||||| ||||| |||||||| || || |||| ||  ||||||| |||    
T  12012785 aagggttaga-gattgcaatttttatttgtttgcaacatagcgag-ttacctgttttggttgcacaaaagtaaacaacgattaggattcttcgaatcccc 12012688  T
Q  246 ctatttat 253  Q
    ||||||||    
T  12012687 ctatttat 12012680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 18529149 - 18529082
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||  ||||||||| ||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctgttttggttgtagaaaagtaagcagtggttag 18529082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 28008216 - 28008313
Alignment:
Q  130 ataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||| ||| ||||| ||||| | ||||||||||||||||||| ||| | ||||| || || | ||||| |||||||||||||||||||||||||    
T  28008216 ataaaataaaagagtaaaggattaga-gattgcaatttttatctgtttccaatagagcaaatt-acttgttttggttgcagaaaagtaagcagcggttag 28008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 18825781 - 18825847
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcg 224  Q
    |||||||||||||||||||| ||||| ||||| ||||| | ||||| ||| ||||||||||||||||    
T  18825781 gttgcaatttttatctgtttacaacaaagcaaatttacttgttttggttgtagaaaagtaagcagcg 18825847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 21987957 - 21987887
Alignment:
Q  157 ggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggt 226  Q
    ||||||||||||||| ||||||||||| ||||| |||||||  ||||| ||||| ||||||||||||||||    
T  21987957 ggttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagtaagcagcggt 21987887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24267889 - 24267827
Alignment:
Q  13 cggattagacaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||| ||||    
T  24267889 cggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatc 24267827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 27117825 - 27117720
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| ||||| || |||||| || ||||||||||||||||||||||| ||||| ||||   ||   |||||||||||| ||||||||| ||| |||    
T  27117825 cggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgtta 27117726  T
Q  112 cttatt 117  Q
    ||||||    
T  27117725 cttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 15813261 - 15813057
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || | || ||||||||||||||||| |  |||||||||  ||  |||| ||||| | ||||||||| |  | |||    
T  15813261 cggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagtgac-tatcgtatccacaaggattttcgttgcgtccaaacaactctcgtta 15813163  T
Q  112 cttatttttagtttcgtgataaaataaacgagaaaagggtta-gacggttgcaatttttatctgtttgcaacatagcaagtttacctat-tttgcttgca 209  Q
    |||||||| | |||   ||||||||||| |||| |||||||| || | ||||||||||||| ||||| |||||||||||| |||||| | ||||||||||    
T  15813162 cttattttaa-tttgacgataaaataaa-gagataagggttaagaggtttgcaatttttatatgtttccaacatagcaag-ttacctgtctttgcttgca 15813066  T
Q  210 gaaaagtaa 218  Q
     ||||||||    
T  15813065 aaaaagtaa 15813057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16916908 - 16916840
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcgg 225  Q
    |||||||||||||||| ||||||||| ||| | |||||||  ||||| |||||||||||||||||||||    
T  16916908 gttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgg 16916840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 21973164 - 21973071
Alignment:
Q  161 gcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttaga--atatttcgaatacccctatttat 253  Q
    ||||||||||||||||||||||||| |||| ||||||  ||||| |||||||||||||| |||||||||||  ||  ||||||| |||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatccccctatttat 21973071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 18830607 - 18830670
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    |||||||||| ||||||||||||||| || || ||||||| ||||| ||||| |||||||||||    
T  18830607 gttgcaatttctatctgtttgcaacagagaaattttacctgttttggttgcataaaagtaagca 18830670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 25405591 - 25405521
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||| ||||||||||| ||||||||||| |  ||||| |||||| ||||||||||||||||||    
T  25405591 ttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcag-aaagtaagcagcggttag 25405521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 16360010 - 16360071
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||| ||||||||||| |||||    
T  16360010 ttgcaatttttatttgtttgcaacaaagcaag-ttacctgttttggttgcagaaaagaaagca 16360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 18825675 - 18825709
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||||||||||||||||||||||||||||||    
T  18825675 accaagtaataaagtgataagtaaagtatcgtatc 18825709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 21334672 - 21334591
Alignment:
Q  165 tttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccc 246  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||| |||||||||| |||||||||| ||  ||||||| ||||    
T  21334672 tttttatctgtttgcaaaatagcaag-ttacctatttttggttgaagaaaagtaaacagcggttaggattcttcgaatccccc 21334591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 21666565 - 21666507
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagca 221  Q
    ||||||||||||||||||| | | ||||||||||| ||||| ||| |||||||||||||    
T  21666565 aatttttatctgtttgcaagacaacaagtttacctgttttggttgtagaaaagtaagca 21666507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 26649075 - 26648966
Alignment:
Q  15 gattagacaagtgtatcaaatc-attaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| || ||| |||||  ||  |||| ||||||| ||||||||| | || ||| |    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagtgaa-tattgtatccacatggattatcgtttcgtccaaacaactcgcgttatt 26648977  T
Q  114 tatttttagtt 124  Q
    |||||| ||||    
T  26648976 tattttaagtt 26648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 32382968 - 32382899
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| |||||  |||||| ||||| ||||||||| || |||||| |||||    
T  32382968 ttgcaatttttatctgtttgcaacagagcaa-attacctgttttggttgcagaaatgttagcagccgttag 32382899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 147625 - 147672
Alignment:
Q  15 gattagacaagtgtatcaaatcattac-caagtaataaagtgataagt 61  Q
    |||||||||||||||||||||| || | ||||||||||||||||||||    
T  147625 gattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagt 147672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 12012906 - 12012803
Alignment:
Q  14 ggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattac 112  Q
    ||||||| ||||||||||||||| || | |||||| |||||||||||||| ||||| |||||  ||   |||||||||| ||| |||| ||| || ||||    
T  12012906 ggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgttac 12012807  T
Q  113 ttat 116  Q
    ||||    
T  12012806 ttat 12012803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 44795361 - 44795447
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaa 99  Q
    ||||||||||||||||| | || |||| |||||||||||||| |||||||  |||||||||||  ||  |||||||||||| ||||||    
T  44795361 cggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 15807980 - 15807911
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||| ||||||||||| |||||| |||||  ||||| ||| |||||| ||||||||| ||||    
T  15807980 ttgcaatttttatttgtttgcaacagagcaag-ttaccagttttggttgtagaaaaataagcagcgattag 15807911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 15813633 - 15813519
Alignment:
Q  12 gcggattagacaagtgtatcaaatc-attaccaagtaataaagtgat-aagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcat 109  Q
    |||||||||||||||||| ||||||  ||| |||  ||||||||||| ||||| ||||| |||||  ||  |||||||||||| |  |||||||| |  |    
T  15813633 gcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgt 15813534  T
Q  110 tacttatttttagtt 124  Q
    |||||||||||||||    
T  15813533 tacttatttttagtt 15813519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 17121460 - 17121391
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||| |||| || ||||||||| | |||||||| || | ||||| |||||||||||||||||||||||||    
T  17121460 ttgcatttttcatttgtttgcaatagagcaagtt-acttgttttggttgcagaaaagtaagcagcggttag 17121391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 17837509 - 17837615
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||  || ||||||||||||||| ||||||| |||||| ||||  ||  ||||||| |||  || |||||||| || |||    
T  17837509 cggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgtta 17837608  T
Q  112 cttattt 118  Q
    |||||||    
T  17837609 cttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 15813470 - 15813409
Alignment:
Q  192 ttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctatttat 253  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||  || |||| |||||||||||    
T  15813470 ttacctgttttggttgcagaaaagtaagcagcagttagtattcttagaatccccctatttat 15813409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 21847629 - 21847717
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||| |||||||| |||||| || |||||||||||||||  |||||| ||||| |||||  ||  |||||||||||| |||||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaatt 21847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 22620255 - 22620316
Alignment:
Q  14 ggattagacaagtgtatcaaat-cattaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||| |||||||||||||| | |||  ||||||||||||||||| || |||||||||||    
T  22620255 ggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatc 22620316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 22622910 - 22622991
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    |||||||||||||||||| |||| |||||| ||||   || ||||||| |||| |||||| |||| || ||||||| |||||    
T  22622910 accaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttta 22622991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 24214562 - 24214643
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    ||||||||||||||||||||||||| ||||  |||||  ||  |||||| ||||| || |||||| || | |||||||||||    
T  24214562 ttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttatttt 24214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 14781828 - 14781756
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||| |||||||| || ||||| |||||||  ||||| |||||||||||| | |||| |||||    
T  14781828 gttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttag 14781756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 16069630 - 16069578
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttc 92  Q
    ||||||||||||||||||||||||| |||| |||   ||| ||||||||||||    
T  16069630 accaagtaataaagtgataagtaaaatatcatatacacagggattgtcgtttc 16069578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 16917011 - 16916931
Alignment:
Q  42 caagtaataaagtga-taagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||| | |||||| |||||||||||  ||| ||||||| |||| ||| |||||||  | |||||||||||||    
T  16917011 caagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttattttta 16916931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 18830501 - 18830565
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||| |||||||||  |||| |||||||||  ||| ||||||| |||| |||||||||||    
T  18830501 accaagtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaatt 18830565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 35559 - 35745
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaataaacg 141  Q
    |||||||||||||||||| || ||||| |||||  ||  |||| ||||||| ||||||||||| || ||||||||||| |||||  |||||||||||| |    
T  35559 caagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatgataaaataaaag 35658  T
Q  142 ag-aaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||  |||||||||||   ||||||||||||| ||| ||||||| |||||| |||||| ||||| ||||||||| ||||||||||||||    
T  35659 agttaaagggttagagatttgcaatttttatttgtctgcaacaaagcaag-ttacctgttttggttgcagaaaggtaagcagcggtta 35745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 24245625 - 24245407
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    |||||| |||||||||||||||||| |||||||||||  ||  |||||||||||| ||||||||| | || |||||||||||| ||    ||| || |||    
T  24245625 ttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattttt-gtaagttgagaatata 24245527  T
Q  138 aacgagaaaagggttagac-ggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatattt 236  Q
    || || ||||||||||||  |||| | |||||||| ||||| ||||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||  ||    
T  24245526 aaagataaaagggttagaaaggtttcgatttttatttgtttccaacaaagcaagtttacctgttttagttgcagaaaagtaagcaacggttaggattctt 24245427  T
Q  237 cgaatacccctatttatatt 256  Q
    ||||| ||||| ||||||||    
T  24245426 cgaatccccctgtttatatt 24245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 20744643 - 20744560
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  20744643 aagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacctgttttggttgtagaaaagtaagcagcggttag 20744560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 17431901 - 17432107
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta---gtttcgtgataaa 134  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||||||||||||||||||| |  |  ||||||||||||   ||||  ||   |     
T  17431901 ttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttatttttataagttt--tggcgat 17431998  T
Q  135 ataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatat 234  Q
    |||||  | | |||||||| |  |||| ||||||| ||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| ||      
T  17431999 ataaa--atataagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttgttttggttgcagaaaagtaagcagcggttaggattc 17432096  T
Q  235 ttcgaataccc 245  Q
    |||||||||||    
T  17432097 ttcgaataccc 17432107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 22755513 - 22755694
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||||||||||| | |||| || |||||||||| ||| |||||||| |||||||||||   |  |||||||||||| ||||||||||| ||||||    
T  22755513 cggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcatta 22755612  T
Q  112 cttatttttagttt--cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
     ||||||| |||||  ||  |||||||||| |||  ||||||||||   || |||||||||||||||||||||| ||||||||    
T  22755613 tttatttt-agttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 24140460 - 24140644
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaata 137  Q
    ||||||||||||||||||||||||| ||||| |||||  | | ||||||| |||| ||||||||||| || |||| |||||||| |         || |     
T  24140460 ttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatatttttatt---------aagtt 24140550  T
Q  138 aacgagaaaagggttagacgg--ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||| | |||||||| |  |  || |||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  24140551 aacgatataagggttaaagagacttccaatttttatctgtgtgcgacagagcaagtttacctattttggttgcagaaaagtaagcaacggttag 24140644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 17185459 - 17185547
Alignment:
Q  17 ttagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||||||  |||||||| ||||| ||||||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaatt 17185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 15375980 - 15375881
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| |||||| || ||||| ||||||| ||||||||| |||||| ||||  ||| |||||||||||| |||||| ||||||||||||||||||||    
T  15375980 caagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttattttt 15375881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 25550609 - 25550519
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||||| |||||| ||||  ||| ||||||| |||| |||||||||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaatt 25550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 20858814 - 20858881
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||| |||||||||| ||| | ||||||||||||| ||||| |||||||||||||||||||    
T  20858814 caatttttatcggtttgcaacaaagcgaatttacctattttggttgcataaaagtaagcagcggttag 20858881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 18208355 - 18208121
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || || ||||||||||||| |||||| |||||||||||  ||  ||||||| |||| |||||||||||    |||    
T  18208355 cggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgtta 18208257  T
Q  112 cttatttttagtttcg-tg--ataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgc 208  Q
    ||||||||  |||| | ||  |||||||||| |||  ||||||| || ||||||||||||||||||||||||  | |||||| ||||||  |||| ||||    
T  18208256 cttatttt--gttttgatgatataaaataaaagagttaagggttgga-ggttgcaatttttatctgtttgcagtagagcaag-ttacct-gtttggttgc 18208162  T
Q  209 agaaaagtaagcagcggttagaatatttcgaatacccctat 249  Q
    ||||||||||| ||| |||| ||   ||||||| |||||||    
T  18208161 agaaaagtaagtagcagttacaactcttcgaatccccctat 18208121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 253
Target Start/End: Original strand, 15690803 - 15691008
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagaga-ttgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaataaacgaga 144  Q
    ||||||||||||||||| |||||||||||  | |||| |||||||||| ||||| |||||  | ||||||||||||||||     ||||| |||| |||     
T  15690803 taataaagtgataagtagagtatcgtatccac-gagaattgtcgtttcgtccaaccaattctcgttacttatttttagttgacaaataaa-taaaagagt 15690900  T
Q  145 -aaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatac 243  Q
     |||||||||||   ||||||||||||| |||| | |||| ||||| || |||| ||||| ||||||||||||||||||  ||||| ||  ||||||| |    
T  15690901 taaagggttagagatttgcaatttttatttgttcgtaacagagcaaatt-acctgttttggttgcagaaaagtaagcag-tgttaggattcttcgaatcc 15690998  T
Q  244 ccctatttat 253  Q
    ||||||||||    
T  15690999 ccctatttat 15691008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 24260655 - 24260723
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| || || ||||||||    
T  24260655 ttgcaatttttatctgtttgcaacagagcaag-ttacctattttggttgcagaaatgttaggagcggtta 24260723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 178
Target Start/End: Complemental strand, 25402415 - 25402278
Alignment:
Q  41 ccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagtttcgtgataaaataaac 140  Q
    ||||||||  |||||||||||| ||||| |||||  ||| |||||||||||| ||| ||  ||| || ||||||||||| |||||    ||||||||||     
T  25402415 ccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttattttaagtttgacaataaaataaaa 25402316  T
Q  141 gagaaaagggttagacggttgcaatttttatctgtttg 178  Q
    |||  ||||||||||   ||||||||||||||||||||    
T  25402315 gagtgaagggttagagatttgcaatttttatctgtttg 25402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 34128788 - 34128864
Alignment:
Q  173 tgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctat 249  Q
    ||||||||| | ||||||||||||| ||||| ||||||||||||||||| ||||||| ||  ||||||| |||||||    
T  34128788 tgtttgcaatagagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatccccctat 34128864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 28664902 - 28664969
Alignment:
Q  161 gcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||||||||||| ||| | ||||||| ||||| |||||||||| |||||| ||||||    
T  28664902 gcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaaataagcaacggtta 28664969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 20315390 - 20315320
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||| ||||| || |||||| |||| ||||    
T  20315390 ttgcaatttttatctgtttgcaacaaagcaagtttacatgttttggttgcaaaatagtaagaagcgattag 20315320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24265435 - 24265366
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||| | |||||| ||||||  |||  |||||||||||||||||||||||||    
T  24265435 ttgcaatttttatctgtttgcaataaagcaag-ttaccttatttagttgcagaaaagtaagcagcggttag 24265366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24342066 - 24341997
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||||||||| | |||||| ||||||  |||  |||||||||||||||||||||||||    
T  24342066 ttgcaatttttatctgtttgcaataaagcaag-ttaccttatttagttgcagaaaagtaagcagcggttag 24341997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 36175272 - 36175340
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||| ||| ||||||||||| ||||||||    
T  36175272 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggtta 36175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 19004307 - 19004153
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt---agtttcgtgataaa 134  Q
    ||||||||||||||||||||||||  |||||||||||  ||  ||||||| |||  |||||||||||  | ||||||||||||   ||||   |||  |     
T  19004307 ttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttgtaagtt---tgacgat 19004211  T
Q  135 ataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagttta 194  Q
    |||||  ||| |||||||| |  ||||||||||||||||||||||||||  |||||||||    
T  19004210 ataaa--agataagggttaaatagttgcaatttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 20564054 - 20563982
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||||| ||||| |  ||||| ||||||||||||||| ||| |||||    
T  20564054 gttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttag 20563982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 15375856 - 15375765
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttagaatatttcgaatacccctat 249  Q
    ||||||||||||| ||||||||||| ||||||||  |||| ||||| ||||| ||||||||| | ||||||| ||  ||||||| |||||||    
T  15375856 ttgcaatttttatttgtttgcaacagagcaagttcgcctatttttggttgcataaaagtaagtaacggttaggattcttcgaatccccctat 15375765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 20315511 - 20315428
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    |||||||||||||| |||||||||| |||||||||||  ||  |||| || |||| ||||||||||| || | |||||||||||    
T  20315511 ttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattttta 20315428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 17315177 - 17315115
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||||||||||||||||||||||||||  ||  ||||||| |||| ||| |||||||    
T  17315177 caagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaatt 17315115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 18937740 - 18937919
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    |||||||| |||||||| |||||| || |  ||||||||||||||||||| |||||||||||    || |||||| ||||| |||||||||||  | |||    
T  18937740 cggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagt-aagtatcgtattcagagggattgttgtttcgtccaaacaattcacgtta 18937838  T
Q  112 cttatttttagtt-tcgtgataaaataaacgagaaaagggtt-agacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||||| ||||   |  |||||||||| |||  ||||||| ||| | || |||||||||||||||||||||| ||||||||    
T  18937839 cttattttaagttaatgatataaaataaa-gagttaagggttgaga-gatttcaatttttatctgtttgcaacagagcaagtt 18937919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 23014711 - 23014654
Alignment:
Q  17 ttagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||| |||||||||||||| |||| ||| ||||||||||||||||| ||||| |||||    
T  23014711 ttaggcaagtgtatcaaatgattatcaaataataaagtgataagtagagtattgtatc 23014654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 24852254 - 24852173
Alignment:
Q  37 attaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    |||||||||||||||| ||||||||| |||||||||||  ||  |||||| ||||| || ||||||||  | ||||||||||    
T  24852254 attaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 15469928 - 15470020
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||| |||||||| |||||| || ||||||||||||||||||| ||  |||||||||||  ||   ||||||||||| || ||||||||    
T  15469928 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaatt 15470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 16523765 - 16523693
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||| | |||||||  ||||  ||  |||||||||||||||||||||    
T  16523765 gttgcaatttttatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttag 16523693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 19086286 - 19086230
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtat 68  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||||||| |||||    
T  19086286 cggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 19086230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 23388917 - 23388853
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| ||| |||||||    
T  23388917 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaatt 23388853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 26121007 - 26121093
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttagaatatttcgaat-acccctatt 250  Q
    |||||||||||||||||| ||||| |||  ||||| ||||| ||||||||| |||||||| |||||||||  ||||||| |||||||||    
T  26121007 aatttttatctgtttgcagcatagaaag-atacctgttttg-ttgcagaaatgtaagcagtggttagaattcttcgaatcacccctatt 26121093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 36175126 - 36175233
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||| ||||||||| |||||| || |||||||||||||||| |  ||| |||||||||||   |  |||||||||||| |||||||||  ||| |||    
T  36175126 cggattaaacaagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgtta 36175224  T
Q  112 cttattttt 120  Q
    |||||||||    
T  36175225 cttattttt 36175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 17171660 - 17171553
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcatta 111  Q
    ||||||||  ||||||| |||||| || | ||||||||||||||||||||| || ||||||||  ||  |||||||||||| || || ||||| || |||    
T  17171660 cggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgtta 17171561  T
Q  112 cttatttt 119  Q
     |||||||    
T  17171560 attatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 26120925 - 26120964
Alignment:
Q  81 gattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  26120925 gattgtcgtttcgtccaaacaattagcattacttattttt 26120964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 39434480 - 39434563
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||| ||||||||| |  ||||||||  ||  ||||||| |||  ||||||||||| || |||||||||||||    
T  39434480 ttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttta 39434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 39434620 - 39434663
Alignment:
Q  186 gcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||    
T  39434620 gcaagtttacctgttttgtttgcagaaaagtaagcaacggttag 39434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 17315070 - 17315004
Alignment:
Q  162 caatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggtta 228  Q
    |||||||||||| ||||||| | ||| |  |||||| ||||| ||||| ||||||||||||||||||    
T  17315070 caatttttatctttttgcaatagagcgaagttacctgttttggttgcaaaaaagtaagcagcggtta 17315004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 26835796 - 26835857
Alignment:
Q  167 tttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||||| ||| | ||||||| ||||| ||||||||||||| ||||| |||||    
T  26835796 tttatctgtttgcaacagagcgaatttacctgttttg-ttgcagaaaagtatgcagcagttag 26835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 34487656 - 34487807
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt---cgtgataa- 133  Q
    |||||||||||||||||| |||||| | |||| ||||  ||  |||||||||||| || |||||||| || |||||||||||  ||||   ||  ||||     
T  34487656 ttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttatttt--gttttgacgatataat 34487752  T
Q  134 aataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaa 189  Q
    ||||||  ||| |||||||||| | ||||||||||||||||||| ||||| |||||    
T  34487753 aataaaaaagataagggttaga-gattgcaatttttatctgttttcaacagagcaa 34487807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 19051540 - 19051632
Alignment:
Q  12 gcggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||| ||||||| |||||| || || |||||||||||||||||||  ||| |||||||  ||| |||||| ||| |||| ||||||||    
T  19051540 gcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatc-ccagggattgttgttccatctaaacaatt 19051632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 34128656 - 34128737
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttta 121  Q
    ||||||||||||||||||||||| | |||||||||  |||  |||||| |||| |||||| ||||  | || ||||||||||    
T  34128656 accaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttattttta 34128737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 24267058 - 24266955
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| |||||||| |||||| || |||||||||||||||| |||||| |||||||||||  ||  |||| || |||  ||||||||||| |  ||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactt 24266960  T
Q  115 atttt 119  Q
    |||||    
T  24266959 atttt 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 24343689 - 24343586
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| |||||||| |||||| || |||||||||||||||| |||||| |||||||||||  ||  |||| || |||  ||||||||||| |  ||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactt 24343591  T
Q  115 atttt 119  Q
    |||||    
T  24343590 atttt 24343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 69914 - 70121
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||   ||  |||||||||||| |||||||||||  | ||||||||||||    
T  69914 caagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattttt 70013  T
Q  121 agtttcgtgataaaataaacgagaaaagggttag-acggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaa 218  Q
     || |  |||| | |||||  ||| || |||||| | ||||||||||||||| ||||||||| | |||||||||||||  ||||| ||| ||||||||||    
T  70014 -gtatgttgatgatataaa--agataaaggttagaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaa 70110  T
Q  219 gcagcggttag 229  Q
    ||||| |||||    
T  70111 gcagcagttag 70121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 39576 - 39792
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttg-catt 110  Q
    |||||||| ||||||||  |||| ||| ||||||||||||||||||||||| || ||||||||  ||  |||||| ||||  |||||| ||  |  | ||    
T  39576 cggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcacttt 39675  T
Q  111 acttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgca 209  Q
    ||||||||| ||||  ||  |||||||||| |||| |||  ||||| | ||||||||||||||||||||||||| |||||| |||||| ||||| |||||    
T  39676 acttattttaagttgacgatataaaataaaagagataagaattaga-gattgcaatttttatctgtttgcaacagagcaag-ttacctgttttggttgca 39773  T
Q  210 gaaaagtaagcagcggtta 228  Q
    |||||||||||||||||||    
T  39774 gaaaagtaagcagcggtta 39792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 919 - 713
Alignment:
Q  23 aagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttag 122  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||||||||||    |||||||||||||| ||||||||||   | |||||||||||||     
T  919 aagtgtactaaatcgttaccaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttat 820  T
Q  123 tttcgtgataaaataaacgagaaaaggg-ttag-acggttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaag 219  Q
         |||  | |||||  ||| ||||| |||| | | ||||||||||||||||||||||||| || ||||||||||  ||||| |||||||||||||||    
T  819 aagtttgacgatataaa--agataagggtttagaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagtaag 722  T
Q  220 cagcggtta 228  Q
     ||||||||    
T  721 aagcggtta 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 568 - 639
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||||||||||||||| ||| | ||||||| ||||| |||||||||||||||||||||||||    
T  568 gttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttag 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 6282 - 6385
Alignment:
Q  16 attagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    ||||| ||||||||||||||| || || |||||||||||| |||||||||||||||||||  ||  |||||| ||||| ||||||||||| |||||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattactt 6381  T
Q  115 attt 118  Q
    ||||    
T  6382 attt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 43304 - 43154
Alignment:
Q  42 caagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttttagttt-cgtgataaaataaac 140  Q
    |||||||||||||||||||||||||| ||||||  ||  |||||||||||| || |||||  | |  ||||||||||| | ||  ||  ||||||||||     
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaataaaa 43205  T
Q  141 gagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||| |||||||||| | ||||||||||||||||||||||||| ||||||||    
T  43204 gagataagggttaga-gattgcaatttttatctgtttgcaacagagcaagtt 43154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 168403 - 168226
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattact 113  Q
    |||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||||  ||| |||||||||||| || ||| |  | |  |||||    
T  168403 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacag-gattgtcgtttcttctaaatagctcgtgttact 168305  T
Q  114 tatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    |||||| ||||  ||  |||||||||| || | |||||||||| | || |||||||||||||||||||||| ||||||||    
T  168304 tattttaagttgacgatataaaataaaagacataagggttaga-gatttcaatttttatctgtttgcaacagagcaagtt 168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 3759 - 3843
Alignment:
Q  146 aagggttagacggttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||  ||||||||||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||    
T  3759 aagggttagagagttgcaatttttatctgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttag 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 25112 - 25183
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||| ||| ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  25112 gttgcaatttttctctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcaacggttag 25183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 21402 - 21473
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    |||||||||||||| ||||||||||| || |||||||||| ||||| || |||||||||||| |||| ||||    
T  21402 gttgcaatttttatttgtttgcaacagaggaagtttacctgttttggtttcagaaaagtaagtagcgattag 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 21299 - 21360
Alignment:
Q  43 aagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||||||||||||| |||||| ||||  ||| ||||||| |||| ||| |||||||    
T  21299 aagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaatt 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 54852 - 55033
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgttt-catccaaacaatttgcatt 110  Q
    ||||||||  ||||||| |||||| || ||||||||||||||||||||||| ||||| |||||  ||| ||||||||||| | || ||| |  |||| ||    
T  54852 cggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgtt 54951  T
Q  111 acttatttttagttt-cgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtt 192  Q
    ||||||||| ||||  ||  ||||||||||  ||| |||||||||| | || |||||||||| ||||||| ||||||||||||    
T  54952 acttattttaagttaacgatataaaataaaaaagataagggttaga-gattccaatttttatttgtttgcgacatagcaagtt 55033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 234362 - 234425
Alignment:
Q  41 ccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||| |||| ||| |||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaatt 234425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 48284 - 48235
Alignment:
Q  26 tgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  48284 tgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 722 - 936
Alignment:
Q  15 gattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttg-cattac 112  Q
    |||||| |||||||| |||||| || ||||||||||||||||||||||| ||||| |||||  ||  |||||||||||| ||||||||||  | | ||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttac 821  T
Q  113 ttatttttagtt-tcgtgataaaataaacgagaaaagggttagacggttgcaatttttatctgtttgcaacatagcaagtttacctattttgcttgcaga 211  Q
    ||||||| ||||   |  |||||||||| |||  |||||||||| | || ||||||||| |||||||||||| || |||  |||||  |||| ||| |||    
T  822 ttattttaagttgaagatataaaataaaagagttaagggttaga-gatttcaatttttacctgtttgcaacagagtaag-atacct-gtttggttgtaga 918  T
Q  212 aaagtaagcagcggttag 229  Q
    ||| ||||||||||||||    
T  919 aaactaagcagcggttag 936  T

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Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 72148 - 72212
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttaccta-ttttgcttgcagaaaagtaagcag 222  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||  ||||||||||||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcag 72212  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  46 taataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattt 118  Q
    ||||||||||||||||| |||||| ||||  ||  |||||| |||||| ||||||||||||||||||||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

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Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 181804 - 181734
Alignment:
Q  21 acaagtgtatcaaatca-ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgttt 91  Q
    ||||||||| ||||||| |||||||||||||||||||||| |  |||||||||||  || ||||||||||||    
T  181804 acaagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttt 181734  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15572 - 15510
Alignment:
Q  13 cggattagacaagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatc 74  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||| ||| |||||||||||    
T  15572 cggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatc 15510  T

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Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 89957 - 89854
Alignment:
Q  16 attagacaagtgtatcaaatc-attaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattactt 114  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||| |||||| ||||  ||   ||||||||||| || |||||| | || ||||||    
T  89957 attagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttactt 89859  T
Q  115 atttt 119  Q
    |||||    
T  89858 atttt 89854  T

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Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 89809 - 89744
Alignment:
Q  163 aatttttatctgtttgcaacatagcaagtttacctattttgcttgcagaaaagtaagcagcggttag 229  Q
    ||||| ||||||||||||||  | |||||| |||| ||||| |||||||||| ||||||||||||||    
T  89809 aatttctatctgtttgcaaccgaacaagtt-acctgttttggttgcagaaaaataagcagcggttag 89744  T

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Target: scaffold1869 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 487 - 404
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||| ||| || || |||||||||||||||| ||| |||||||||||  ||| ||||||| |||| |||||||||||    
T  487 caagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaatt 404  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 3551 - 3615
Alignment:
Q  40 accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatt 104  Q
    ||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| ||| |||||||    
T  3551 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaatt 3615  T

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Target: scaffold0263 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 15785 - 15855
Alignment:
Q  159 ttgcaatttttatctgtttgcaacatagcaagtttacctatttt-gcttgcagaaaagtaagcagcggttag 229  Q
    ||||||||||||||  ||||||||| |||||||| |||| |||| | |||| ||||||||||||||||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagtt-acctgtttttggttgcggaaaagtaagcagcggttag 15855  T

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Target: scaffold0838 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 2371 - 2469
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    |||||||| |||||| || ||||| |||||||| |||||||| |||||||||||  ||  ||||| | |||| ||||||||||| || ||| |||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2469  T

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Target: scaffold0832 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 2402 - 2500
Alignment:
Q  22 caagtgtatcaaatcatt-accaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttatttt 119  Q
    |||||||| |||||| || ||||| |||||||| |||||||| |||||||||||  ||  ||||| | |||| ||||||||||| || ||| |||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2500  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 29925 - 30006
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttgcattacttattttt 120  Q
    |||||||||||||||||| |||||| ||||| |||||   |||||||||||| ||   |||||||||| | ||||||||||||    
T  29925 ttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttattttt 30006  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 1752 - 1805
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgttt 91  Q
    ||||||||||| ||||||||||||| |||||||||||  |||  ||||||||||    
T  1752 ttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttt 1805  T

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Target: scaffold0957 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 3171 - 3238
Alignment:
Q  38 ttaccaagtaataaagtgataagtaaagtatcgtatcggcagagattgtcgtttcatccaaacaatttg 106  Q
    |||||||||||||||||| || ||| |||||||||||  ||  ||||||| ||||||||||| ||||||    
T  3171 ttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatttg 3238  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 19103 - 19163
Alignment:
Q  13 cggattagacaagtgtatcaaatcattaccaagtaataaagtgataagtaaagtatcgtat 73  Q
    |||||||| |||||||| |||||  ||  ||||||||||| ||||||||||| ||||||||    
T  19103 cggattaggcaagtgtaccaaattgttttcaagtaataaaatgataagtaaattatcgtat 19163  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 76541 - 76605
Alignment:
Q  158 gttgcaatttttatctgtttgcaacatagcaagtttacct-attttgcttgcagaaaagtaagca 221  Q
    ||||||| |||||| ||||| ||||||||||| |||||||  ||||| ||| |||||||||||||    
T  76541 gttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagca 76605  T

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