View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_315 (Length: 258)
Name: NF10954A_low_315
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_315 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 256
Target Start/End: Complemental strand, 50468202 - 50467957
Alignment:
| Q |
11 |
cagagaggttggggaataaccatagttgaaaattgaaattggcatgtgcatccatgcatggagcatgaccaatagccaataagtgtagttggagacataa |
110 |
Q |
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| T |
50468202 |
cagagaggttggggaataaccatagttgaaaattgaaattggcatgtgcatccatgcatggagcatgaccaatagccaataagtgtagttggagacataa |
50468103 |
T |
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| Q |
111 |
cagttcacttccaactatatttttctcttagaacccaagattcggaagacataatgatacaaagattccacacaaggttatcacttctacggttctacta |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
50468102 |
cagttcacttccaactatatttttctcttagaacccaagattcggaagacataatgatacaaagattccacacaaggatatcacttctacggttctacta |
50468003 |
T |
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| Q |
211 |
ctaatttaaaaagagatttcaaacacattggagaaattaaattatt |
256 |
Q |
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| T |
50468002 |
ctaatttaaaaagagatttcaaacacattggagaaattaaattatt |
50467957 |
T |
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