View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_379 (Length: 249)
Name: NF10954A_low_379
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_379 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 12624907 - 12624664
Alignment:
| Q |
1 |
accgagtaatgatatcaaccatcgatggaaaaaagcatcaccatgtagatttaaaagtaatgtggacgcctctttctcatcatctaagaataaggctggt |
100 |
Q |
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| T |
12624907 |
accgagtaatgatatcagccatcgttggaaaaaagcatccccaggtagatttaaatgtaatgtcgacgcctctttctcatcatctaagaataaggctggt |
12624808 |
T |
|
| Q |
101 |
attgatatgttcattcgtgatgccgacagatgcattttgcttgcaaagaccatctggttttccccattgtgttcagtgaagacagacgaagcaatgtgag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12624807 |
attgatatgttcattcgtgatgccgacagatgcattttgcttgcaaagaccatctggttttccccattgtgttcagtgaagacagacgaagcaatgtgac |
12624708 |
T |
|
| Q |
201 |
tttatcaggtgttactatgagcagccgacgtccttcatctcagt |
244 |
Q |
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||||||||||||||||||||||||| |||||||| ||| ||||| |
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| T |
12624707 |
tttatcaggtgttactatgagcagctgacgtcctacatttcagt |
12624664 |
T |
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