View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_395 (Length: 248)
Name: NF10954A_low_395
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_395 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 38323357 - 38323142
Alignment:
| Q |
15 |
ttgaggttaagaagattcatggattgttgtttaaatttgggttggaattggatgttttcgttggaagtgctttggttactacttatttgaaattttggtt |
114 |
Q |
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| T |
38323357 |
ttgaggttaagaagattcatggattgttgtttaaatttgggttggaattggatgtttttgttggaagtgctttggttactacttatttgaaattttggtt |
38323258 |
T |
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| Q |
115 |
ggttgtggatgcacatgaggtgtttgaggaattgcctgttagagatgttgtgctttggaattcgatggttaatggatatgcgcagattgggtgctttgag |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
38323257 |
ggttgtggatgcacatgaggtgtttgaggaattgcctgttagagatgttgtgctttggaattcgatggttaatggatatgcacagattgggtgctttgag |
38323158 |
T |
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| Q |
215 |
gaggctttggggatgt |
230 |
Q |
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|||||||||||||||| |
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| T |
38323157 |
gaggctttggggatgt |
38323142 |
T |
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