View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_406 (Length: 247)
Name: NF10954A_low_406
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_406 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 37195707 - 37195940
Alignment:
| Q |
3 |
aaatcaaatattgatgaggtttactgtgtattcctttttaggtgccttattttaaactatttttgccttctcactattcttcatctggtaagaaagtgac |
102 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37195707 |
aaatcaaatattgatgaggtttactgtgtattgctttttaggtgccttattttaaactatttttttcttctcactattcttcatctggtaagaaagtgac |
37195806 |
T |
|
| Q |
103 |
caagctaggtaacttgttcaatgagtctaaggttattgtattacattctaatgcactagttggttaaaagttccaactaacctttgttatttaccgactc |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
37195807 |
caagctaggtaacttgttcaatgagtctaaggttattgtattacattctaatgcactagttggttaaaagttctaactaacctttgttatttaccgactc |
37195906 |
T |
|
| Q |
203 |
atgttattaaatgttgacaaggaactgtattcat |
236 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
37195907 |
atgttattaaatgttgacaaggaactgtattcat |
37195940 |
T |
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