View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_420 (Length: 246)
Name: NF10954A_low_420
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_420 |
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Alignment Details
Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 8840617 - 8840418
Alignment:
| Q |
7 |
tctacctcaccctagtgtctgccattgcagcatacataggacagaaaatcattgacaagcttgtcaatatctttcaaagagcttccttgattatctttgt |
106 |
Q |
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| T |
8840617 |
tctacctcaccctagtgtctaccattgcagcatacataggacagaaaatcattgacaagcttgtcaatatctttcaaagagcttccttgattatctttgt |
8840518 |
T |
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| Q |
107 |
tttatccttcacaattcttgttagtgcaattgcactaggtgagtaatgcttatatatgttataatgagtcaaattgccatgcttgttttaactatatcaa |
206 |
Q |
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| T |
8840517 |
tttatccttcacaattcttgttagtgcaattgcactaggtaagtaatgcttatatatgttataatgagtcaaattgtcatgtttgatttaactatatcaa |
8840418 |
T |
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