View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_428 (Length: 245)

Name: NF10954A_low_428
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_428
NF10954A_low_428
[»] chr7 (62 HSPs)
chr7 (6-231)||(12372161-12372386)
chr7 (6-231)||(12465200-12465425)
chr7 (6-231)||(12322870-12323095)
chr7 (6-231)||(8851099-8851324)
chr7 (6-231)||(32433529-32433754)
chr7 (12-231)||(13147418-13147637)
chr7 (6-231)||(11067355-11067580)
chr7 (6-231)||(16999320-16999548)
chr7 (29-231)||(12127126-12127328)
chr7 (65-231)||(20620173-20620339)
chr7 (12-231)||(46386038-46386253)
chr7 (61-231)||(20214034-20214204)
chr7 (66-231)||(14180398-14180563)
chr7 (66-231)||(20586239-20586404)
chr7 (70-231)||(10277215-10277375)
chr7 (66-231)||(24269947-24270112)
chr7 (6-190)||(47974760-47974944)
chr7 (7-118)||(43276685-43276796)
chr7 (6-170)||(12754553-12754716)
chr7 (29-128)||(44374833-44374932)
chr7 (29-128)||(44383698-44383797)
chr7 (6-96)||(14160796-14160886)
chr7 (7-112)||(18074588-18074693)
chr7 (66-178)||(35771441-35771554)
chr7 (7-95)||(19283079-19283167)
chr7 (60-226)||(33002053-33002211)
chr7 (6-96)||(58353-58443)
chr7 (66-188)||(8135238-8135359)
chr7 (66-188)||(13698638-13698761)
chr7 (66-188)||(15095637-15095759)
chr7 (6-118)||(19195611-19195725)
chr7 (66-188)||(48807325-48807448)
chr7 (66-178)||(4071759-4071872)
chr7 (66-178)||(14218895-14219008)
chr7 (66-187)||(15623950-15624070)
chr7 (6-103)||(32160140-32160237)
chr7 (65-195)||(25943041-25943171)
chr7 (55-118)||(4690652-4690715)
chr7 (66-188)||(15140143-15140265)
chr7 (63-136)||(13744655-13744728)
chr7 (66-166)||(16078281-16078382)
chr7 (66-169)||(10658851-10658955)
chr7 (66-170)||(15289052-15289157)
chr7 (108-188)||(13132363-13132443)
chr7 (29-118)||(38299748-38299839)
chr7 (6-113)||(8488034-8488141)
chr7 (188-231)||(25942358-25942401)
chr7 (61-167)||(36704566-36704673)
chr7 (29-96)||(13744471-13744540)
chr7 (66-103)||(29052182-29052219)
chr7 (80-186)||(12557853-12557959)
chr7 (66-112)||(16250222-16250268)
chr7 (54-96)||(25943289-25943331)
chr7 (132-174)||(36685211-36685253)
chr7 (7-96)||(15119248-15119337)
chr7 (66-103)||(16550005-16550042)
chr7 (66-103)||(16615620-16615657)
chr7 (55-112)||(43745662-43745719)
chr7 (11-51)||(16214541-16214581)
chr7 (66-118)||(18955330-18955382)
chr7 (66-118)||(20252182-20252234)
chr7 (106-186)||(41284963-41285043)
[»] chr6 (34 HSPs)
chr6 (6-231)||(7827859-7828084)
chr6 (6-231)||(19655171-19655396)
chr6 (6-231)||(23150227-23150452)
chr6 (6-231)||(18703451-18703680)
chr6 (6-231)||(18709386-18709615)
chr6 (7-231)||(27125419-27125642)
chr6 (66-231)||(15890712-15890877)
chr6 (66-216)||(27329981-27330131)
chr6 (66-216)||(27390721-27390871)
chr6 (67-166)||(24267801-24267900)
chr6 (66-227)||(19235015-19235175)
chr6 (69-190)||(18585733-18585854)
chr6 (66-226)||(28948466-28948627)
chr6 (66-184)||(18928614-18928733)
chr6 (6-84)||(17318106-17318184)
chr6 (155-227)||(19167926-19167998)
chr6 (6-118)||(20410452-20410564)
chr6 (66-227)||(30673402-30673556)
chr6 (65-184)||(19401028-19401147)
chr6 (66-169)||(24550168-24550271)
chr6 (65-167)||(27572121-27572223)
chr6 (66-127)||(15998880-15998941)
chr6 (66-170)||(31731904-31732009)
chr6 (66-118)||(12041620-12041672)
chr6 (29-96)||(19825449-19825516)
chr6 (6-96)||(31734729-31734819)
chr6 (132-188)||(23501601-23501658)
chr6 (29-86)||(25922033-25922090)
chr6 (70-110)||(29625191-29625231)
chr6 (41-96)||(23431422-23431477)
chr6 (54-96)||(10446239-10446281)
chr6 (160-221)||(18259266-18259328)
chr6 (66-136)||(19167853-19167923)
chr6 (66-103)||(15173453-15173490)
[»] chr4 (38 HSPs)
chr4 (6-231)||(25091540-25091765)
chr4 (6-231)||(53630414-53630639)
chr4 (6-231)||(10356376-10356601)
chr4 (6-231)||(19610211-19610436)
chr4 (6-231)||(42875684-42875909)
chr4 (6-231)||(16998412-16998637)
chr4 (44-231)||(11425830-11426017)
chr4 (66-231)||(15115109-15115274)
chr4 (66-227)||(37019561-37019722)
chr4 (70-231)||(6633541-6633701)
chr4 (70-231)||(46001535-46001695)
chr4 (6-118)||(12424230-12424342)
chr4 (6-96)||(40230328-40230418)
chr4 (6-103)||(10694185-10694282)
chr4 (6-103)||(10907951-10908048)
chr4 (6-118)||(25513851-25513963)
chr4 (66-186)||(9924085-9924206)
chr4 (66-183)||(14549695-14549812)
chr4 (6-118)||(9639010-9639122)
chr4 (6-96)||(19022366-19022456)
chr4 (66-179)||(19434559-19434672)
chr4 (152-219)||(26921707-26921774)
chr4 (66-152)||(15613056-15613142)
chr4 (66-169)||(21144-21248)
chr4 (66-188)||(9870444-9870568)
chr4 (66-169)||(51993509-51993613)
chr4 (66-184)||(11478653-11478772)
chr4 (55-112)||(2424376-2424433)
chr4 (65-112)||(35811375-35811422)
chr4 (32-118)||(33186903-33186989)
chr4 (66-103)||(15008978-15009015)
chr4 (66-103)||(21062656-21062693)
chr4 (6-96)||(44023547-44023633)
chr4 (66-122)||(14186955-14187010)
chr4 (41-96)||(33243269-33243324)
chr4 (29-96)||(10273405-10273474)
chr4 (66-103)||(40620547-40620584)
chr4 (66-118)||(16296938-16296990)
[»] chr1 (29 HSPs)
chr1 (6-231)||(19676598-19676823)
chr1 (9-231)||(21045992-21046214)
chr1 (41-231)||(16058289-16058478)
chr1 (6-231)||(20633571-20633799)
chr1 (66-231)||(42912936-42913101)
chr1 (66-190)||(24723351-24723475)
chr1 (66-226)||(51324396-51324556)
chr1 (66-190)||(7051922-7052046)
chr1 (6-96)||(41225394-41225484)
chr1 (6-96)||(41226647-41226737)
chr1 (66-170)||(13302849-13302954)
chr1 (66-227)||(21168825-21168985)
chr1 (6-118)||(12710867-12710979)
chr1 (6-118)||(28476674-28476786)
chr1 (8-96)||(20588660-20588748)
chr1 (8-96)||(20593198-20593286)
chr1 (66-169)||(42697732-42697836)
chr1 (135-190)||(44822090-44822145)
chr1 (66-118)||(51336479-51336531)
chr1 (66-188)||(7320594-7320716)
chr1 (66-215)||(4595853-4595995)
chr1 (66-147)||(21239049-21239130)
chr1 (31-188)||(22350646-22350799)
chr1 (29-113)||(8306611-8306695)
chr1 (66-118)||(12327743-12327795)
chr1 (66-103)||(29763632-29763669)
chr1 (63-128)||(45499382-45499446)
chr1 (66-103)||(46197745-46197782)
chr1 (66-103)||(50001491-50001528)
[»] scaffold0737 (1 HSPs)
scaffold0737 (6-231)||(4654-4879)
[»] scaffold0064 (1 HSPs)
scaffold0064 (6-231)||(58633-58858)
[»] chr3 (57 HSPs)
chr3 (6-219)||(22306523-22306736)
chr3 (6-231)||(17044853-17045078)
chr3 (6-231)||(17693954-17694179)
chr3 (6-231)||(17047013-17047238)
chr3 (6-231)||(35354489-35354714)
chr3 (12-231)||(11259318-11259537)
chr3 (30-231)||(49900617-49900818)
chr3 (7-231)||(17538993-17539217)
chr3 (6-229)||(41172311-41172534)
chr3 (41-231)||(17518848-17519038)
chr3 (41-231)||(17533710-17533900)
chr3 (66-231)||(40807883-40808048)
chr3 (6-231)||(40812720-40812941)
chr3 (6-231)||(15931448-15931672)
chr3 (66-231)||(44274305-44274470)
chr3 (81-231)||(50348041-50348191)
chr3 (66-231)||(10563596-10563760)
chr3 (70-231)||(10311415-10311575)
chr3 (6-215)||(14508749-14508959)
chr3 (6-128)||(17541424-17541546)
chr3 (91-183)||(35064566-35064658)
chr3 (66-226)||(19568208-19568368)
chr3 (66-226)||(9510916-9511076)
chr3 (66-226)||(9518891-9519051)
chr3 (55-188)||(11563654-11563788)
chr3 (167-231)||(35064681-35064745)
chr3 (173-231)||(5200277-5200335)
chr3 (66-186)||(33565018-33565139)
chr3 (66-186)||(35960928-35961049)
chr3 (66-170)||(16050875-16050979)
chr3 (6-73)||(17325561-17325628)
chr3 (66-188)||(42323971-42324094)
chr3 (66-178)||(13185834-13185947)
chr3 (41-118)||(15566744-15566821)
chr3 (66-170)||(24177736-24177840)
chr3 (6-188)||(45530544-45530725)
chr3 (9-96)||(50350759-50350846)
chr3 (69-167)||(11885560-11885658)
chr3 (66-169)||(12509350-12509454)
chr3 (6-118)||(14152339-14152451)
chr3 (66-118)||(15446868-15446920)
chr3 (65-188)||(49968858-49968981)
chr3 (33-87)||(50347602-50347656)
chr3 (66-107)||(5200243-5200284)
chr3 (29-113)||(14641511-14641595)
chr3 (83-188)||(37038978-37039085)
chr3 (66-127)||(36528858-36528919)
chr3 (69-169)||(14250085-14250185)
chr3 (41-96)||(6159427-6159482)
chr3 (41-96)||(53646034-53646089)
chr3 (65-103)||(22652788-22652826)
chr3 (156-221)||(34851388-34851454)
chr3 (66-103)||(16979927-16979964)
chr3 (66-118)||(17208524-17208576)
chr3 (54-118)||(29907639-29907703)
chr3 (54-118)||(29948805-29948869)
chr3 (54-118)||(29997959-29998023)
[»] chr2 (36 HSPs)
chr2 (6-231)||(9975816-9976041)
chr2 (9-232)||(5031072-5031295)
chr2 (9-231)||(24780783-24781005)
chr2 (6-231)||(24436535-24436760)
chr2 (6-218)||(22251388-22251600)
chr2 (29-231)||(17307373-17307575)
chr2 (6-231)||(2523687-2523912)
chr2 (66-231)||(24516073-24516238)
chr2 (66-231)||(40912207-40912372)
chr2 (55-231)||(19201189-19201365)
chr2 (70-231)||(37270587-37270747)
chr2 (103-231)||(27484514-27484642)
chr2 (115-231)||(36841151-36841267)
chr2 (6-180)||(27852605-27852776)
chr2 (66-188)||(25142133-25142256)
chr2 (66-190)||(357809-357933)
chr2 (68-190)||(1383545-1383667)
chr2 (66-188)||(3539766-3539889)
chr2 (41-190)||(22501897-22502048)
chr2 (41-190)||(22509831-22509982)
chr2 (6-77)||(36841268-36841339)
chr2 (6-95)||(21369316-21369405)
chr2 (7-96)||(14179669-14179758)
chr2 (6-90)||(31521197-31521281)
chr2 (41-113)||(149476-149548)
chr2 (66-169)||(25046066-25046170)
chr2 (135-189)||(24884399-24884453)
chr2 (6-99)||(20916326-20916419)
chr2 (66-169)||(5986125-5986229)
chr2 (14-96)||(14183414-14183496)
chr2 (66-103)||(21080969-21081006)
chr2 (66-158)||(44072517-44072609)
chr2 (53-96)||(23801518-23801561)
chr2 (66-183)||(22259974-22260090)
chr2 (10-51)||(24718086-24718127)
chr2 (66-103)||(25184204-25184241)
[»] scaffold1283 (1 HSPs)
scaffold1283 (6-231)||(408-633)
[»] scaffold0001 (3 HSPs)
scaffold0001 (6-231)||(31881-32106)
scaffold0001 (6-231)||(37188-37413)
scaffold0001 (6-231)||(77574-77799)
[»] scaffold1633 (1 HSPs)
scaffold1633 (7-231)||(1092-1316)
[»] chr8 (50 HSPs)
chr8 (8-231)||(42817849-42818072)
chr8 (12-224)||(19140659-19140870)
chr8 (6-231)||(39935947-39936175)
chr8 (66-231)||(20083638-20083803)
chr8 (79-231)||(5082225-5082377)
chr8 (55-231)||(5761421-5761596)
chr8 (70-231)||(6573060-6573221)
chr8 (66-231)||(6101753-6101918)
chr8 (70-231)||(37292593-37292753)
chr8 (70-231)||(6202664-6202824)
chr8 (7-118)||(18761448-18761559)
chr8 (130-231)||(20178593-20178695)
chr8 (66-220)||(20397510-20397656)
chr8 (66-226)||(22532132-22532292)
chr8 (66-226)||(22536817-22536977)
chr8 (6-106)||(23943766-23943866)
chr8 (6-96)||(21579146-21579236)
chr8 (6-96)||(36306019-36306109)
chr8 (9-113)||(22258249-22258353)
chr8 (66-232)||(31722493-31722659)
chr8 (66-188)||(45469219-45469342)
chr8 (55-188)||(20022029-20022155)
chr8 (66-170)||(17906849-17906953)
chr8 (7-96)||(18834444-18834533)
chr8 (66-178)||(36727038-36727151)
chr8 (55-118)||(4380606-4380669)
chr8 (80-226)||(39694291-39694437)
chr8 (66-188)||(22317911-22318033)
chr8 (6-77)||(29762808-29762879)
chr8 (29-118)||(22208269-22208358)
chr8 (66-169)||(23419388-23419493)
chr8 (66-178)||(23899987-23900100)
chr8 (29-86)||(12037127-12037184)
chr8 (66-169)||(19700109-19700213)
chr8 (66-169)||(23948211-23948315)
chr8 (65-170)||(17218649-17218755)
chr8 (29-96)||(22345186-22345255)
chr8 (29-96)||(22356846-22356915)
chr8 (66-103)||(17158963-17159000)
chr8 (66-127)||(22583660-22583721)
chr8 (66-103)||(23479097-23479134)
chr8 (66-127)||(23889790-23889851)
chr8 (66-103)||(26454723-26454760)
chr8 (66-102)||(19880838-19880874)
chr8 (66-118)||(22254766-22254818)
chr8 (70-110)||(34758875-34758915)
chr8 (65-136)||(36305837-36305908)
chr8 (55-113)||(21514696-21514754)
chr8 (66-118)||(12577880-12577931)
chr8 (132-188)||(42265575-42265631)
[»] scaffold0077 (2 HSPs)
scaffold0077 (7-231)||(34226-34450)
scaffold0077 (66-169)||(5898-6002)
[»] scaffold0407 (1 HSPs)
scaffold0407 (6-231)||(11215-11439)
[»] scaffold0080 (2 HSPs)
scaffold0080 (11-231)||(21738-21958)
scaffold0080 (6-59)||(58827-58880)
[»] scaffold0241 (2 HSPs)
scaffold0241 (66-231)||(3069-3234)
scaffold0241 (124-231)||(2451-2558)
[»] chr5 (25 HSPs)
chr5 (41-231)||(21300019-21300209)
chr5 (70-217)||(7484903-7485050)
chr5 (30-231)||(19921525-19921732)
chr5 (66-227)||(20566445-20566598)
chr5 (57-215)||(31622028-31622178)
chr5 (61-190)||(36508628-36508757)
chr5 (7-118)||(23199148-23199259)
chr5 (6-96)||(21398584-21398674)
chr5 (66-184)||(21617928-21618047)
chr5 (66-190)||(31456888-31457012)
chr5 (66-169)||(10954038-10954141)
chr5 (65-184)||(22111762-22111881)
chr5 (66-170)||(20469176-20469281)
chr5 (66-118)||(6551290-6551342)
chr5 (135-189)||(17876132-17876186)
chr5 (65-103)||(266053-266091)
chr5 (30-96)||(32607280-32607346)
chr5 (66-103)||(17011743-17011780)
chr5 (170-219)||(22111715-22111764)
chr5 (69-118)||(30616614-30616663)
chr5 (106-186)||(31251931-31252011)
chr5 (66-147)||(25249828-25249910)
chr5 (66-147)||(25313612-25313694)
chr5 (6-96)||(26762424-26762514)
chr5 (66-118)||(18744874-18744926)
[»] scaffold1941 (1 HSPs)
scaffold1941 (66-231)||(25-190)
[»] scaffold0111 (2 HSPs)
scaffold0111 (41-226)||(12508-12693)
scaffold0111 (69-231)||(5270-5432)
[»] scaffold1766 (1 HSPs)
scaffold1766 (66-231)||(696-861)
[»] scaffold0207 (1 HSPs)
scaffold0207 (66-231)||(13392-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (66-231)||(168999-169164)
scaffold0020 (62-231)||(143498-143667)
scaffold0020 (6-96)||(174243-174333)
[»] scaffold0334 (1 HSPs)
scaffold0334 (66-231)||(405-570)
[»] scaffold0026 (1 HSPs)
scaffold0026 (66-231)||(146610-146775)
[»] scaffold0019 (1 HSPs)
scaffold0019 (6-170)||(24071-24235)
[»] scaffold0004 (5 HSPs)
scaffold0004 (55-231)||(328277-328455)
scaffold0004 (153-221)||(72841-72909)
scaffold0004 (65-219)||(75691-75839)
scaffold0004 (65-170)||(110121-110227)
scaffold0004 (29-113)||(73092-73178)
[»] scaffold0632 (1 HSPs)
scaffold0632 (66-231)||(1052-1217)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-179)||(78125-78298)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-227)||(78955-79161)
[»] scaffold0149 (2 HSPs)
scaffold0149 (66-205)||(29573-29711)
scaffold0149 (66-190)||(21539-21663)
[»] scaffold0956 (1 HSPs)
scaffold0956 (7-149)||(2524-2666)
[»] scaffold0285 (1 HSPs)
scaffold0285 (53-227)||(19652-19818)
[»] scaffold0113 (1 HSPs)
scaffold0113 (66-192)||(35418-35542)
[»] scaffold0213 (1 HSPs)
scaffold0213 (9-118)||(19207-19316)
[»] scaffold0230 (1 HSPs)
scaffold0230 (69-190)||(6688-6809)
[»] scaffold0112 (1 HSPs)
scaffold0112 (66-227)||(2787-2941)
[»] scaffold0431 (1 HSPs)
scaffold0431 (6-118)||(5633-5745)
[»] scaffold0037 (3 HSPs)
scaffold0037 (66-226)||(112966-113127)
scaffold0037 (65-184)||(81501-81620)
scaffold0037 (66-226)||(117807-117960)
[»] scaffold0040 (1 HSPs)
scaffold0040 (66-190)||(106051-106175)
[»] scaffold0162 (1 HSPs)
scaffold0162 (6-96)||(23832-23922)
[»] scaffold0156 (1 HSPs)
scaffold0156 (72-190)||(16532-16650)
[»] scaffold0203 (1 HSPs)
scaffold0203 (41-118)||(17915-17992)
[»] scaffold0083 (2 HSPs)
scaffold0083 (66-226)||(10755-10913)
scaffold0083 (66-108)||(5045-5087)
[»] scaffold0174 (6 HSPs)
scaffold0174 (65-220)||(19605-19759)
scaffold0174 (70-221)||(5167-5310)
scaffold0174 (70-221)||(11287-11430)
scaffold0174 (29-118)||(5454-5543)
scaffold0174 (29-96)||(19878-19945)
scaffold0174 (29-95)||(11639-11705)
[»] scaffold0032 (1 HSPs)
scaffold0032 (41-118)||(61823-61900)
[»] scaffold0107 (1 HSPs)
scaffold0107 (7-86)||(13493-13572)
[»] scaffold0628 (1 HSPs)
scaffold0628 (55-188)||(1047-1181)
[»] scaffold0379 (2 HSPs)
scaffold0379 (6-96)||(10969-11059)
scaffold0379 (65-183)||(10741-10851)
[»] scaffold0802 (1 HSPs)
scaffold0802 (66-186)||(4709-4830)
[»] scaffold0848 (1 HSPs)
scaffold0848 (65-188)||(2020-2143)
[»] scaffold0100 (1 HSPs)
scaffold0100 (70-217)||(26638-26779)
[»] scaffold0853 (1 HSPs)
scaffold0853 (7-118)||(2396-2506)
[»] scaffold0008 (1 HSPs)
scaffold0008 (66-187)||(135504-135625)
[»] scaffold0439 (1 HSPs)
scaffold0439 (132-189)||(12323-12380)
[»] scaffold0175 (1 HSPs)
scaffold0175 (66-188)||(8571-8694)
[»] scaffold0123 (1 HSPs)
scaffold0123 (66-188)||(7205-7329)
[»] scaffold0075 (1 HSPs)
scaffold0075 (66-169)||(60843-60947)
[»] scaffold1256 (1 HSPs)
scaffold1256 (55-118)||(2189-2252)
[»] scaffold0261 (1 HSPs)
scaffold0261 (152-219)||(6619-6686)
[»] scaffold0125 (1 HSPs)
scaffold0125 (7-86)||(28583-28662)
[»] scaffold0010 (1 HSPs)
scaffold0010 (66-169)||(126305-126407)
[»] scaffold0516 (1 HSPs)
scaffold0516 (55-113)||(5294-5352)
[»] scaffold0414 (1 HSPs)
scaffold0414 (6-96)||(11100-11190)
[»] scaffold0220 (1 HSPs)
scaffold0220 (66-167)||(19905-20006)
[»] scaffold0028 (1 HSPs)
scaffold0028 (67-188)||(3053-3174)
[»] scaffold0041 (1 HSPs)
scaffold0041 (71-120)||(5712-5761)
[»] scaffold0071 (1 HSPs)
scaffold0071 (66-118)||(15272-15324)
[»] scaffold0328 (1 HSPs)
scaffold0328 (41-96)||(18615-18670)
[»] scaffold0256 (1 HSPs)
scaffold0256 (74-136)||(1855-1917)
[»] scaffold0251 (1 HSPs)
scaffold0251 (66-183)||(20086-20202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (66-178)||(67060-67173)
[»] scaffold0671 (1 HSPs)
scaffold0671 (66-169)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (66-169)||(4333-4437)
[»] scaffold0002 (1 HSPs)
scaffold0002 (66-169)||(398510-398614)
[»] scaffold0859 (1 HSPs)
scaffold0859 (81-188)||(4612-4718)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-169)||(96347-96446)
[»] scaffold0601 (1 HSPs)
scaffold0601 (65-103)||(195-233)
[»] scaffold0371 (1 HSPs)
scaffold0371 (6-96)||(10386-10476)
[»] scaffold0031 (1 HSPs)
scaffold0031 (29-96)||(127304-127373)
[»] scaffold0676 (1 HSPs)
scaffold0676 (41-118)||(2881-2958)
[»] scaffold0515 (1 HSPs)
scaffold0515 (66-103)||(5044-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (66-103)||(8975-9012)
[»] scaffold0395 (1 HSPs)
scaffold0395 (6-51)||(11956-12001)
[»] scaffold0306 (1 HSPs)
scaffold0306 (66-103)||(5044-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (66-103)||(21112-21149)
scaffold0138 (66-103)||(34127-34164)
[»] scaffold0074 (1 HSPs)
scaffold0074 (6-51)||(2005-2050)
[»] scaffold0057 (1 HSPs)
scaffold0057 (66-103)||(69853-69890)
[»] scaffold0065 (1 HSPs)
scaffold0065 (66-169)||(52544-52648)
[»] scaffold0042 (1 HSPs)
scaffold0042 (66-165)||(29340-29440)
[»] scaffold0878 (1 HSPs)
scaffold0878 (54-96)||(3410-3452)
[»] scaffold0505 (1 HSPs)
scaffold0505 (54-96)||(4958-5000)
[»] scaffold0058 (1 HSPs)
scaffold0058 (70-103)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (66-103)||(21777-21814)
[»] scaffold0034 (1 HSPs)
scaffold0034 (66-103)||(29216-29253)
[»] scaffold0017 (1 HSPs)
scaffold0017 (69-118)||(26727-26776)
[»] scaffold0007 (1 HSPs)
scaffold0007 (132-193)||(158888-158949)
[»] scaffold0070 (1 HSPs)
scaffold0070 (41-77)||(11194-11230)
[»] scaffold0061 (2 HSPs)
scaffold0061 (54-118)||(14574-14638)
scaffold0061 (54-118)||(23632-23696)


Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 12372386 - 12372161
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12372386 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12372287  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372286 tataattctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12372187  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||||||||||    
T  12372186 tcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 12465200 - 12465425
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12465200 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12465299  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12465300 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12465399  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  12465400 ccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 12322870 - 12323095
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  12322870 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttg 12322969  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12322970 tataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaat 12323069  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  12323070 ccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 8851099 - 8851324
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8851099 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 8851198  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  8851199 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaat 8851298  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    | ||||||||||||||||||||||||    
T  8851299 ctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 32433529 - 32433754
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  32433529 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 32433628  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32433629 tataattctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 32433728  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
      ||||||||||||||||| ||||||    
T  32433729 tagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 13147418 - 13147637
Alignment:
Q  12 agagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataat 111  Q
    |||||||||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  13147418 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataat 13147517  T
Q  112 tcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 211  Q
    || |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13147518 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttg 13147617  T
Q  212 aatttgtgtagaattgatgt 231  Q
    ||||||||||||| ||||||    
T  13147618 aatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 11067580 - 11067355
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||| ||| | ||||||||||| |||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11067580 cagagaagagaagaatattgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11067481  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  11067480 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaat 11067381  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     ||||||||||||| |||| ||||||    
T  11067380 tcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 16999548 - 16999320
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattcta--agt 103  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||  |||    
T  16999548 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagt 16999449  T
Q  104 tgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaattt-gagaattaggttttgaagttgtaattggttgttaatagagtagaa 202  Q
    |||||||||| |||||||||||||| ||||| || ||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  16999448 tgtataattctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaa 16999349  T
Q  203 aatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||    
T  16999348 aatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 12127126 - 12127328
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttag 128  Q
    ||||||||||| ||| |||||| || |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||     
T  12127126 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaa 12127225  T
Q  129 gatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 228  Q
     |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |    
T  12127226 catgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaattta 12127325  T
Q  229 tgt 231  Q
    |||    
T  12127326 tgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 20620339 - 20620173
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 46386038 - 46386253
Alignment:
Q  12 agagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataat 111  Q
    |||||| ||||||| | ||||| ||||| |||||||| || | ||||    || |||| ||||||| |||||||||||||||||||||||||||||||||    
T  46386038 agagaataatcttgtgagaagatgagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataat 46386133  T
Q  112 tcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 211  Q
    || |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46386134 tctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttg 46386233  T
Q  212 aatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||    
T  46386234 aatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  61 taatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgag 160  Q
    |||| |||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| |    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  161 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 14180398 - 14180563
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||| ||||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 20586404 - 20586239
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||| |  || ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 24269947 - 24270112
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||| | ||||   | ||  || ||| ||||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 47974760 - 47974944
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||||| |||||||||| | ||||||||||| | ||||||||| | |||   |||  ||||||||||||  ||||||||||||||||||||||||||    
T  47974760 cagagaagaaaagaatcttgtgagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttg 47974859  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgtt 190  Q
    ||| |||| |||| ||  ||||  | || ||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||    
T  47974860 tatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 43276685 - 43276796
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  |  |||||    
T  43276685 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgt 43276784  T
Q  107 ataattcggaaa 118  Q
    ||||||| ||||    
T  43276785 ataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 12754553 - 12754716
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| ||   || |||  |||||||||||| ||||||||||||||||||||||||||     
T  12754553 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcatcgat-taacctaaggtaagggtgggactaactttctctaattctaagtta 12754651  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttt 170  Q
    ||| |||| |||| ||  ||||  | || |||||||||||| ||||||||||| |||||| ||||    
T  12754652 tatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 44374932 - 44374833
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttag 128  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  44374932 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 44383797 - 44383698
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttag 128  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  44383797 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 14160796 - 14160886
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||| ||||    
T  14160796 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 18074588 - 18074693
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    |||| |||||||||||||| | ||||| || || ||||||||||||| | |||||||||||||||||| || ||| ||||||||||||||||||||| ||    
T  18074588 agaggagagaagaatcttgtgagaagaagatcaatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggt 18074687  T
Q  107 ataatt 112  Q
    ||||||    
T  18074688 ataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||| | |||| || ||||  | |||||||||||||||| |||||||||| |||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 19283167 - 19283079
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaa 95  Q
    ||||||||||||||||||| | ||| ||||| | ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19283167 agagaagagaagaatcttgtgagaaaaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 226
Target Start/End: Complemental strand, 33002211 - 33002053
Alignment:
Q  60 ctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttga 159  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||       |||| |   ||||||||||| ||| ||||||     
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaatt-------ggatttaacaggttgtagtt-tgggaatttgg 33002120  T
Q  160 gaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||||||| || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 58353 - 58443
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | |||||||| || ||||||||| ||| |||||||||| |||||||||||| |||||| |||||||||||    
T  58353 cagagaagagaagaatcttgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||| ||| ||||| |||||| |||| |||| |||||||| ||||  | |||||||||||||||| | | |||||||||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  166 ggttttgaagttgtaattggttg 188  Q
    ||||| |||||||||||||||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||| ||||| |||||||  |||||| |||| |||  |||   ||||| |||||||||||| |||||||||| |||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||| || |||||||||||||||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 15095637 - 15095759
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| ||| |||||||||||| |||| |||| |||| |||| ||||  | |||||||||||||||| ||| |||||| |||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||| ||||    
T  15095736 aggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 19195725 - 19195611
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaa--gaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||||||||||| | ||   ||||| || ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||  | |||    
T  19195725 cagagaagagaagaatcttgtgagataggaggaacaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagt 19195626  T
Q  104 tgtataattcggaaa 118  Q
    |||||||||| ||||    
T  19195625 tgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| | |||| || ||||  | ||||||| |||||||| ||| |||||| |||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  165 aggttttgaagttgtaattggttg 188  Q
     |||   |||||||||||||||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| || | ||||||  ||||  | |||||||||||||||| |||  |||||||||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | ||||||| ||||  | |||||||||||||||| ||  |||||  |||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 15624070 - 15623950
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||| |||  ||||||||||| |||| |||| |||||||| ||||  | ||||||| |||||||| ||| |||||||||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatta 15623972  T
Q  166 ggttttgaagttgtaattggtt 187  Q
    ||||| | ||||||||||||||    
T  15623971 ggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 32160140 - 32160237
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| | |||   |||  ||||||||||||  ||||||||||||||||||||||||    
T  32160140 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagt 32160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 195
Target Start/End: Complemental strand, 25943171 - 25943041
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| |||| ||| ||| ||||||||||||||| |  |||||||||||| |||||||| ||||| ||||||| | ||||   | ||  ||||||  ||||    
T  25943171 ttaatgtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaatt 25943072  T
Q  165 aggttttgaagttgtaattggttgttaatag 195  Q
    |||||||||||| ||||||||||||||||||    
T  25943071 aggttttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 4690652 - 4690715
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  4690652 atcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 15140265 - 15140143
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||| ||||  ||||||| ||| |||||||||||| |||| |||| |||| |||| ||||  | |||||||||||||||| ||| |||||| |||||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||||||  ||||||||||||||||    
T  15140166 aggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  63 atttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgt 136  Q
    |||||| |||||||| ||| ||||||||||||||| || |||||||||||| |||||| ||||||| |||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataatt-cggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||  | |||| || ||||  | ||||||| |||||||| ||| |||||| |||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  165 ag 166  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 10658851 - 10658955
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga-aatttgagaatt 164  Q
    |||||||||||| |||||||| |||| |||||||||||||||| |||| |||||||  ||||  || ||||||| ||||||| ||||  |||| ||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagttttggaggatttaagaatt 10658950  T
Q  165 aggtt 169  Q
    |||||    
T  10658951 aggtt 10658955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||| ||||||||||||||||||||  ||||| || | ||||||  ||||  | |||||||||||||||| ||   |||||||||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  165 aggttt 170  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  108 taattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttg 188  Q
    |||||| |||||||| ||||  | ||||||||| |||||| ||| |||||| ||||||||||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 38299839 - 38299748
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||  |||||||||||   ||||||||||| |||||||||||| |||||| |||||||||||  |  |||||||||||| ||||    
T  38299839 gaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 8488034 - 8488141
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| || || ||||||| ||| | |||   |||  |||||||||||| ||||||||||||||||||  |  ||||    
T  8488034 cagagaagagaagaatcttgtgagaagaagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttg 8488133  T
Q  106 tataattc 113  Q
    ||||||||    
T  8488134 tataattc 8488141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  188 gttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 36704566 - 36704673
Alignment:
Q  61 taatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga-aatttga 159  Q
    |||| |||||||||||| |||||||| |||| ||||| |||||||| |||||| ||||||   ||||  |||||||| | ||||||| ||||  ||||||    
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttggaggatttga 36704665  T
Q  160 gaattagg 167  Q
    ||||||||    
T  36704666 gaattagg 36704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 13744471 - 13744540
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||  |||||||||||   ||||||||||| |||||||||||| |||||| |||||||||||    
T  13744471 gaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 29052182 - 29052219
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagt 29052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 12557959 - 12557853
Alignment:
Q  80 gactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttg 178  Q
    ||||||| ||| |||||||||||| |||| ||||  ||| |||| ||||  | |||||||||||||||| ||| ||||||  |||||||||| |||||||    
T  12557959 gactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttg 12557861  T
Q  179 taattggt 186  Q
     |||||||    
T  12557860 aaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 16250222 - 16250268
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataatt 16250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 25943331 - 25943289
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  25943331 aatcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 36685211 - 36685253
Alignment:
Q  132 gttgtaggttgtagttatggaaatttgagaattaggttttgaa 174  Q
    |||||||||||||||| |||||||||| |||||||| ||||||    
T  36685211 gttgtaggttgtagttttggaaatttgggaattagggtttgaa 36685253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 15119248 - 15119337
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||||| ||| | ||||||||||| |||||||||||   |||   |||  |||||||||||| |||||||| |||| ||||    
T  15119248 agagaagagaagaatattgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaat 15119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 16550005 - 16550042
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||| | |||||||||||||||||||||||||    
T  16550005 taaggtaaggttgggactaactttctctaattctaagt 16550042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 16615657 - 16615620
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||| | |||||||||||||||||||||||||    
T  16615657 taaggtaaggttgggactaactttctctaattctaagt 16615620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 43745719 - 43745662
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataatt 112  Q
    |||||||||  |||||||||||| |||||| |||||||||||  | ||||||||||||    
T  43745719 atcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataatt 43745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 16214581 - 16214541
Alignment:
Q  11 aagagaagaatcttgcgtgaagaggagcattcttgtagagt 51  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  16214581 aagagaagaatcttgtgagaagaggagcaatcttgtagagt 16214541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 18955382 - 18955330
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||| |||  ||||||||||||||||||||||||  |||||||| ||||    
T  18955382 taaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20252182 - 20252234
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||| |||||||||||  | ||||||||||||| ||||    
T  20252182 taaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggt 186  Q
    |||||||| |||||||  ||||  | ||| |||||||||||| | | |||||| ||||||||||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 7828084 - 7827859
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7828084 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 7827985  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7827984 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 7827885  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    | ||||||||||||||||||||||||    
T  7827884 cggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 19655171 - 19655396
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  19655171 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 19655270  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||  |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  19655271 tataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaat 19655370  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  19655371 ccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 23150227 - 23150452
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||| ||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23150227 cagagaagagaaaaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 23150326  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23150327 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaat 23150426  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
      ||||||||||||||||||||||||    
T  23150427 ttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 18703680 - 18703451
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||  | |||||||| || ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18703680 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18703581  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgt----aattggttgttaatagagtaga 201  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||    ||||||||||||||||||||||    
T  18703580 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18703481  T
Q  202 aaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||| ||||| ||||||    
T  18703480 aaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 18709615 - 18709386
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||  | |||||||| || ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18709615 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18709516  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgt----aattggttgttaatagagtaga 201  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||    ||||||||||||||||||||||    
T  18709515 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18709416  T
Q  202 aaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||| ||||| ||||||    
T  18709415 aaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 27125419 - 27125642
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    |||||||||| |||| ||| | ||||| ||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27125419 agagaagaga-gaattttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgt 27125517  T
Q  107 ataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 206  Q
    |||| ||  |||||||| |||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  27125518 ataagtctaaaattgagattagcatgttgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatc 27125617  T
Q  207 cgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||| ||||| ||||||    
T  27125618 cgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 15890712 - 15890877
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||  |||||| ||||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 27329981 - 27330131
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||| |||||| ||||||    
T  27329981 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27330080  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330081 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 27390721 - 27390871
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||| |||||| ||||||    
T  27390721 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27390820  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390821 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 24267900 - 24267801
Alignment:
Q  67 aaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattag 166  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 19235175 - 19235015
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||| ||||||| ||| ||||||||||||||| || |||||||||||| |||||||| ||||||||||||| | ||||   | ||  |||||| || |||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggga-tta 19235077  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggt 168  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||||||  |||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  169 tttgaagttgtaattggttgtt 190  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 28948627 - 28948466
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtag-ttatggaaatttgagaatt 164  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||| ||||||| || | |||||||| |||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 18928733 - 18928614
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||| ||||  | ||||||||||| |||| ||| ||||||  ||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  165 aggttttgaagttgtaattg 184  Q
    |||||| |||||||||||||    
T  18928633 aggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 17318106 - 17318184
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggacta 84  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  17318106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 19167926 - 19167998
Alignment:
Q  155 tttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 20410452 - 20410564
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| | ||||||||||||||||||||||| | | || |||||||||||  |  ||||    
T  20410452 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttg 20410551  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  20410552 tataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 30673402 - 30673556
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||  |||||||||||||| ||| ||| | ||||       ||| |||| ||||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt-------gaattttg-gaatta 30673493  T
Q  166 ggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    ||||||||| | |||||| |||||||||||||||||||||| | ||||||||||||| |||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 19401147 - 19401028
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    ||||||||||||| |||||||| ||| |||||||||||| |||| |||| |||| |||| ||||  | |||||||||||||||| ||| |||||||||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  164 taggttttgaagttgtaattg 184  Q
    |||||||  ||||||||||||    
T  19401048 taggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 24550168 - 24550271
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||  |||| ||||| |||||||| |||||| |||||||  ||||  |||||||||| ||||||| |||| |||| |||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 24550267  T
Q  166 ggtt 169  Q
    ||||    
T  24550268 ggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 167
Target Start/End: Original strand, 27572121 - 27572223
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggat-gttgtaggttgtagttatggaaatttgagaat 163  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||| |||||||| ||||  || ||||||||||  |||| | | |||||||||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggttaaagttttag-aatttgagaat 27572219  T
Q  164 tagg 167  Q
    ||||    
T  27572220 tagg 27572223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagttta 127  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||| ||||||||||  |||||||| | ||||||  |||   | |||||||||||||||| |||  |||||||||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  165 aggttt 170  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| ||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 19825449 - 19825516
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||||||  ||||| |||||||||||    
T  19825449 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 31734819 - 31734729
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||| | |||   |||  |||||||||||| |||||||| |||| ||||    
T  31734819 cagagaagaaaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 31734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 23501658 - 23501601
Alignment:
Q  132 gttgtaggttgtagttat-ggaaatttgagaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| | ||||||||| ||||||||||| |||||||||||| ||||    
T  23501658 gttgtaggttgtagtttttggaaatttgggaattaggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 25922090 - 25922033
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaac 86  Q
    ||||||||||| ||| |||||| || |||||||||| |||||||||||| ||||||||    
T  25922090 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataa 110  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 23431422 - 23431477
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||| |||||||||| ||||||||| || |||||||| |||| ||||    
T  23431422 tcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 10446281 - 10446239
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  10446281 aatcatctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 18259266 - 18259328
Alignment:
Q  160 gaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||| | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259266 gaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgt 136  Q
    |||||||||||| | | ||||||| ||||||  || |||||||||||| || ||||||||||| |||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 15173453 - 15173490
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  15173453 taaggtaatggtgggactaactttctctaattctaagt 15173490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 25091765 - 25091540
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25091765 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 25091666  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25091665 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 25091566  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  25091565 ccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 53630414 - 53630639
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||| |||||||||||| | |||||||| || ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53630414 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 53630513  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53630514 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 53630613  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||||||||||    
T  53630614 tcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 10356376 - 10356601
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| | ||| | ||||||||||||||| | |||||||||||||||||||||||||||    
T  10356376 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttg 10356475  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10356476 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaat 10356575  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  10356576 ccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 19610436 - 19610211
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||| ||||||||||||||| | ||||||||| | ||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  19610436 cagaaaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttg 19610337  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19610336 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaat 19610237  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||| ||||||||||||||||||||    
T  19610236 ccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 42875909 - 42875684
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| | ||||||||||  || |||||||||||||||||||| ||||||||||| | |||||||||||||    
T  42875909 cagagaagagaagaatcttgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttg 42875810  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  42875809 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaat 42875710  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  42875709 ccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 16998637 - 16998412
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | |||||| | || |   ||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  16998637 cagagaagagaagaatcttgtgagaagagaaacaattccgtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttg 16998538  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||  |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16998537 tataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 16998438  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||| ||||||||    
T  16998437 tcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 44 - 231
Target Start/End: Complemental strand, 11426017 - 11425830
Alignment:
Q  44 tgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgt 143  Q
    ||||||| || ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  144 agttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 11425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 15115274 - 15115109
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 37019722 - 37019561
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    ||||||||  ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 12424230 - 12424342
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||  |  ||||    
T  12424230 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 12424329  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  12424330 tataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 40230418 - 40230328
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||||    
T  40230418 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 10694185 - 10694282
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||||||||| | | ||||| ||||| ||||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  10694185 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 10907951 - 10908048
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||||||||| | | ||||| ||||| ||||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  10907951 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 25513963 - 25513851
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||  |||||||||| |||||||| ||| |||||| |||||||||||  | |||||    
T  25513963 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttg 25513864  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  25513863 tataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 9924206 - 9924085
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | ||||||| ||||  | ||||||||||| |||| ||| ||||||  ||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  9924106 aggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 14549812 - 14549695
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||||||||||||||  ||| |||| ||  ||||  | || ||||||||||||| |||||||||| ||||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  166 ggttttgaagttgtaatt 183  Q
    ||||| ||||||||||||    
T  14549712 ggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 9639122 - 9639010
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||| || ||||||| |||||||||||| |||||| |||||||||||  | |||||    
T  9639122 cagagaagagaagaatcttgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttg 9639023  T
Q  106 tataattcggaaa 118  Q
    | |||||| ||||    
T  9639022 tgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 19022456 - 19022366
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||| |||||||| |||  |||||||||||||||||    
T  19022456 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| | |||||||| ||||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  166 ggttttgaagttgt 179  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 26921707 - 26921774
Alignment:
Q  152 aaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921707 aaatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 15613142 - 15613056
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga 152  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||  ||||  |||||||||| ||||||| ||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagttttgga 15613056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 21248 - 21144
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||| |  ||||||| |||| ||||||||||||||||||||| || |||||| ||||  |||||||||||||||||| ||   |||||||||||    
T  21248 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 21149  T
Q  165 aggtt 169  Q
    |||||    
T  21148 aggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaa-t 163  Q
    |||| ||||||| ||||||||||||  ||||||||||||||||||||| |||| |||  |||   ||| |||||||||||||| ||| |||||| ||| |    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 51993613 - 51993509
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga-aatttgagaatt 164  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||| |||||||  ||||  |||||||||| ||||||| ||||  |||| ||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggaggatttaagaatt 51993514  T
Q  165 aggtt 169  Q
    |||||    
T  51993513 aggtt 51993509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 11478653 - 11478772
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||| | ||||||| ||||  | ||||||| ||| |||| ||| ||||||  ||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  165 aggttttgaagttgtaattg 184  Q
    |||||| ||| |||||||||    
T  11478753 aggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 2424376 - 2424433
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataatt 112  Q
    |||||||||  ||||||||||||  |||||||||||||||||||||||||||||||||    
T  2424376 atcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataatt 2424433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 35811375 - 35811422
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataatt 35811422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 33186989 - 33186903
Alignment:
Q  32 gaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||| | ||||||||||| |||||||||||||||||| ||||  ||||| |||||||||||  |  |||||||||||| ||||    
T  33186989 gaggagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 15009015 - 15008978
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagt 15008978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21062693 - 21062656
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 44023547 - 44023633
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||| |||    ||| ||||||||||||  ||||||| |||| ||||    
T  44023547 cagagaagagaagaatcttgtgaaaagaggagcaatcttgtagagtccgatc----aatctaaggtaagggtgcgactaaccttctttaat 44023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 14187010 - 14186955
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattga 122  Q
    |||||||||||| ||| |||||||||||||||||||| ||||| |||| ||||||||    
T  14187010 taaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 33243269 - 33243324
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||||| |||| ||||    
T  33243269 tcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaat 33243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 10273474 - 10273405
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||  |||||||||||   |||| |||||| |||||||||||| |||||| |||||||||||    
T  10273474 gaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 40620584 - 40620547
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  40620584 taaggtaagggtgggaataactttctctaattctaagt 40620547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 16296990 - 16296938
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||| |||||||||||  | ||||||||||||| ||||    
T  16296990 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 19676823 - 19676598
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19676823 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 19676724  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19676723 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 19676624  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  19676623 ccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 21045992 - 21046214
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    ||||||||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21045992 agaagagaagaatcttgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 21046091  T
Q  109 aattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 208  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21046092 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 21046191  T
Q  209 ttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||    
T  21046192 ttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 16058289 - 16058478
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggt 140  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16058289 tcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt 16058388  T
Q  141 tgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16058389 tgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 20633571 - 20633799
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  20633571 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttg 20633670  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtag---ttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaa 202  Q
    |||||||| |||||||||||||| |||||||||||| |||   |||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||    
T  20633671 tataattctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaa 20633770  T
Q  203 aatccgttgaatttgtgtagaattgatgt 231  Q
    |||  ||||||||||||||||||||||||    
T  20633771 aataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 42913101 - 42912936
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||  ||||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||  | || |||| |||||||| |||||||||||||||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
     |||| |||||||||||||||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 51324556 - 51324396
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||||||| ||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| ||| || ||| ||||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || |||| || ||||| | |||||||| ||||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| ||| |||||||||||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 41225394 - 41225484
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| |||||| |||| | ||||||||||||||||||||||| |||||||| |||| ||||    
T  41225394 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 41226647 - 41226737
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| |||||| |||| | ||||||||||||||||||||||| |||||||| |||| ||||    
T  41226647 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | ||||||| ||||  | |||||||||||||||| ||| |||||| |||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  165 aggttt 170  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 21168985 - 21168825
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| | | ||||||||||||||| || ||||||||||||  ||||||||||||| ||||||| | ||||   | ||  |||||| |||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    ||||||||| | ||  || ||| ||||||||||||||||||| ||||||||||||| |||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 12710979 - 12710867
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||| |||||||||| |||||||| | | |||||| |||||||||||  |  ||||    
T  12710979 cagagaagagaagaatcttatgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttg 12710880  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  12710879 tataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 28476674 - 28476786
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||| ||||||||||| | ||||||||||| ||||| |||||||  ||||||||| |||||||||||| ||||||  ||||||||||  | |||||    
T  28476674 cagagaagggaagaatcttgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttg 28476773  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  28476774 tataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 20588748 - 20588660
Alignment:
Q  8 gagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||||  || | ||||||||||| ||||||||||||| |||||| |||||||||||||||| ||| || |||||||||||    
T  20588748 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 20593286 - 20593198
Alignment:
Q  8 gagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||||  || | ||||||||||| ||||||||||||| |||||| |||||||||||||||| ||| || |||||||||||    
T  20593286 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||||| || |||||  ||||  |||||||||||||||||| ||   |||||||||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  165 aggtt 169  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 44822090 - 44822145
Alignment:
Q  135 gtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgtt 190  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 51336531 - 51336479
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| | | |||||||||||| |||| |||| |||| |||| ||||  | ||||||| |||||||| ||| |||||| |||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    | |||| || ||||||||||||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 215
Target Start/End: Original strand, 4595853 - 4595995
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||| | |||| || ||||  | |||||||||||||||        |||| |||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tttgggaatt 4595944  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    || ||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  4595945 agatttagaagttgtaattggttgatttaagagtagataatccgatgaatt 4595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagtt 147  Q
    ||||||| |||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 22350799 - 22350646
Alignment:
Q  31 agaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttagg 129  Q
    ||||||||| ||||||||||||| ||||    || |||||||||||| |||||||| |||  ||||||| |||  ||| |||| |||| |||| ||||      
T  22350799 agaggagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaac 22350705  T
Q  130 atgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttg 188  Q
    | |||||||||||||||| ||| |||||| |||||||| || ||||||| || ||||||    
T  22350704 aagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 8306695 - 8306611
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||| || |||||| |||||||||||  |  ||||||||||||    
T  8306695 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattc 8306611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 12327743 - 12327795
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||| ||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 29763632 - 29763669
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagt 29763669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 45499446 - 45499382
Alignment:
Q  63 atttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttag 128  Q
    |||||| |||||||| ||| ||||| ||||||||| || |||||||||||| ||||||||||||||    
T  45499446 atttaacgtaagggt-ggattaactctctctaattttaggttgtataattctgaaattgagtttag 45499382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 46197745 - 46197782
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagt 46197782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 50001528 - 50001491
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  50001528 taaggtaagggtgggactaactttctttaattctaagt 50001491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 4654 - 4879
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4654 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttg 4753  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4754 tataattctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 4853  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||| ||||||    
T  4854 ccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 58858 - 58633
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  58858 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttg 58759  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    || ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58758 tacaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 58659  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||| ||||||||||||    
T  58658 ccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 6 - 219
Target Start/End: Original strand, 22306523 - 22306736
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22306523 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 22306622  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22306623 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22306722  T
Q  206 ccgttgaatttgtg 219  Q
    ||||||||||||||    
T  22306723 ccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 17045078 - 17044853
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17045078 cagagaagagaagaatcttgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17044979  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17044978 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 17044879  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
      ||||||||||||||||||||||||    
T  17044878 ttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 17694179 - 17693954
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  17694179 cagagaagagaagaatcttgcgagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttg 17694080  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  17694079 tataattctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaat 17693980  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  17693979 ccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 17047238 - 17047013
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17047238 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17047139  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||||||||||||||||||   |||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  17047138 tataattctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaat 17047039  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  17047038 ccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 35354714 - 35354489
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| |||||||    
T  35354714 cagagaagagaagaatcttgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttg 35354615  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||| ||||||  |||||||||||||||||||||||| |||||  |||||||||||||    
T  35354614 tataattctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaat 35354515  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  35354514 ccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 11259537 - 11259318
Alignment:
Q  12 agagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataat 111  Q
    |||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11259537 agagaagaatcttgcgagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataat 11259438  T
Q  112 tcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 211  Q
    || |||||||| ||||| ||||||||| |||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11259437 tctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttg 11259338  T
Q  212 aatttgtgtagaattgatgt 231  Q
    ||||||||||||| ||||||    
T  11259337 aatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 30 - 231
Target Start/End: Complemental strand, 49900818 - 49900617
Alignment:
Q  30 aagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttagg 129  Q
    |||||||| | ||| |||||| || |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||     
T  49900818 aagaggagtaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagc 49900719  T
Q  130 atgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 229  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900718 atgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 49900619  T
Q  230 gt 231  Q
    ||    
T  49900618 gt 49900617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 17539217 - 17538993
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | ||||||||| | ||||||||| ||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  17539217 agagaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgt 17539118  T
Q  107 ataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 206  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  17539117 ataattctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatc 17539018  T
Q  207 cgttgaatttgtgtagaattgatgt 231  Q
     ||||||||||||||||||||||||    
T  17539017 tgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 41172311 - 41172534
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| |  |||| ||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  41172311 cagagaagagaagaatcttgtgacaagatgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttg 41172410  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    ||||| || |||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  41172411 tataactctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 41172510  T
Q  206 ccgttgaatttgtgtagaattgat 229  Q
      ||||||||||||||||||||||    
T  41172511 ttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 17518848 - 17519038
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggt 140  Q
    |||| |||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  17518848 tcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggt 17518947  T
Q  141 tgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518948 tgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 17533710 - 17533900
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggt 140  Q
    |||| |||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  17533710 tcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggt 17533809  T
Q  141 tgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533810 tgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 40808048 - 40807883
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 40812941 - 40812720
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||||| |||||||||| | ||||| || || | ||||||||| | ||||    || |||||||||||| |||||||||||||||||||||||||||    
T  40812941 cagagaagaaaagaatcttgtgagaagatgaacaattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagttg 40812846  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
     ||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40812845 cataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaat 40812746  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  40812745 ccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 15931448 - 15931672
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||| ||||| ||||||||||||| |||  |||||||||||||||||||||||| |    
T  15931448 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-g 15931546  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||  |||||  ||||||||||| ||||||||||||  || |||||||||||||||||    
T  15931547 tataattctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaat 15931646  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||||||||||    
T  15931647 tcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 44274470 - 44274305
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
      |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  81 actaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgta 180  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  181 attggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 10563760 - 10563596
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||| | |||||||||||||||||||||  |||||||||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 14508959 - 14508749
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||| ||||||| | ||||| ||| | ||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  14508959 cagagaagagaataatcttgtgagaagaagagtaatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttg 14508860  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtttt-gaagttgtaattggttgttaatagagtagaaaa 204  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||  | |||||||| ||    
T  14508859 tataattctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataa 14508760  T
Q  205 tccgttgaatt 215  Q
    || | ||||||    
T  14508759 tctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 17541546 - 17541424
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17541546 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17541447  T
Q  106 tataattcggaaattgagtttag 128  Q
    |||||||| ||||||||||||||    
T  17541446 tataattctgaaattgagtttag 17541424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  91 tctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaatt 183  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 19568208 - 19568368
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| |   ||||  | |||||||||||||||| ||| |||||| ||||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    || || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 9510916 - 9511076
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||   |||||||||||||||||||||||||||| |||| |||| ||  ||||  | || |||| |||||||| ||| |||||||||||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    ||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 9518891 - 9519051
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||   |||||||||||||||||||||||||||| |||| |||| ||  ||||  | || |||| |||||||| ||| |||||||||||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    ||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 11563788 - 11563654
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaa 153  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||| | ||||  | ||||  | |||||||||||||||| ||| |    
T  11563788 atcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttggga 11563689  T
Q  154 atttgagaattaggttttgaagttgtaattggttg 188  Q
    ||||| |||||||||||  ||||||||||||||||    
T  11563688 atttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  167 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  173 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 33565139 - 33565018
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | ||||||| ||||  | ||||||||||| |||| ||| ||||||  ||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  33565039 aggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 35960928 - 35961049
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||| |||||||||||||||||| || ||||||||| |||| |||| ||||  | ||||||||||| |||| ||||||||||  ||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  35961028 aggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||  | |||||| ||||||||| ||   ||||||||||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  166 ggttt 170  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 17325561 - 17325628
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaa 73  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||||||    
T  17325561 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| || | ||||| ||||||||||||||| |||| |||| |||   |||||||||||||||||| ||| ||||||  ||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||| || |||||||||||||||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaatt-gagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||| |||||  ||||||||  ||| | || ||||  | |||||||||||||||| |||||||||| |||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 15566821 - 15566744
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||| |||||| ||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15566821 tcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||| |||| ||  ||||  | || ||||||||||||| |||||||||| ||||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  166 ggttt 170  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 45530544 - 45530725
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||||| |||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||||||| | | |||||||| ||   |||||||||| |     
T  45530544 cagagaaga-aagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-ta 45530640  T
Q  106 tataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgag-aattaggttttgaagttgtaattggttg 188  Q
    ||| |||| | ||||||| ||||  | ||||| |||||||||| ||| |||||| | ||||||| || |||||||||||||||||    
T  45530641 tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 50350759 - 50350846
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||||||| | |||||||| || | ||||||||||| |||||||||| |||||||||||| |||||||| |||| ||||    
T  50350759 agaagagaagaatcttgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattagg 167  Q
    ||||||||| |||||||||||||||||||||||||  |||||||| | ||||||  ||||  | |||||||||||||||| ||| |||||||||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 12509350 - 12509454
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga-aatttgagaatt 164  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||||||| |||||||  ||||  |||| ||||| ||||||| ||||  |||| ||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagttttggaggatttaagaatt 12509449  T
Q  165 aggtt 169  Q
    |||||    
T  12509450 aggtt 12509454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 14152339 - 14152451
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||| ||| | |||   |||  |||||||||||| |||||| |||||||||||  | |||||    
T  14152339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagttg 14152438  T
Q  106 tataattcggaaa 118  Q
    ||| |||| ||||    
T  14152439 tatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15446868 - 15446920
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    |||||||||| || |||||||| ||| |||||||||||| |||| |||| |||| |||| ||||  | ||||||| |||||||| ||  |||||| ||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||||||  ||||||||||||||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 50347602 - 50347656
Alignment:
Q  33 aggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaact 87  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||    
T  50347602 aggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 5200243 - 5200284
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgta 107  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 14641511 - 14641595
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    ||||||||||| ||| |||||| || |||||||||| |||||||||||| ||| || |||||||||||  |  ||||||||||||    
T  14641511 gaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattc 14641595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  83 taactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgag-aattaggttttgaagttgta 180  Q
    |||| |||| ||||| ||||||||||||||| |||| |||  ||||  |||||||||||||||||| ||| |||||| | ||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  181 attggttg 188  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 36528919 - 36528858
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagttta 127  Q
    |||||||||||| ||| |||||||||||||||||||||  |||||||| || |||| |||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggttta 36528858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 14250085 - 14250185
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggt 168  Q
    |||||| || |||||||| |||| |||||||||||||| |||||   ||||||  ||||  |||||||| | ||||||| |||| |||| ||||||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaagaattaggt 14250184  T
Q  169 t 169  Q
    |    
T  14250185 t 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6159482 - 6159427
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||  |||||||||||    
T  6159482 tcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 53646034 - 53646089
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||  |||||||||| |||||||||||| |||||||| |||| ||||    
T  53646034 tcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 22652826 - 22652788
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||| || |||||||||||||||||||||||||    
T  22652826 ttaaggtaagagtgggactaactttctctaattctaagt 22652788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 34851388 - 34851454
Alignment:
Q  156 ttgagaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||| | | |||||||||||    
T  34851388 ttgagaattaggttttgagaattgtaattagttgttaattgaatagaaaattcatagaatttgtgta 34851454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 16979964 - 16979927
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  16979964 taaggtaagggtgggactaactttctttaattctaagt 16979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 17208576 - 17208524
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||| |||||||||||  | ||||||||||||| ||||    
T  17208576 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 29907703 - 29907639
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| |||||||||||| |||||| |||||| ||||  |  |||||||||||| ||||    
T  29907703 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 29948869 - 29948805
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| |||||||||||| |||||| |||||| ||||  |  |||||||||||| ||||    
T  29948869 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 29998023 - 29997959
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| |||||||||||| |||||| |||||| ||||  |  |||||||||||| ||||    
T  29998023 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 9976041 - 9975816
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||  | |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9976041 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 9975942  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  9975941 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaat 9975842  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||| ||||||||||||||||||||||    
T  9975841 ccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 5031072 - 5031295
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5031072 agaagagaagaatcttgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 5031171  T
Q  109 aattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 208  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  5031172 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcg 5031271  T
Q  209 ttgaatttgtgtagaattgatgtc 232  Q
    |||||||||||||||| |||||||    
T  5031272 ttgaatttgtgtagaagtgatgtc 5031295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 24780783 - 24781005
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24780783 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 24780882  T
Q  109 aattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 208  Q
    ||||| |||||||||||||| |||  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780883 aattctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 24780982  T
Q  209 ttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||| ||||||    
T  24780983 ttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 24436760 - 24436535
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  24436760 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttg 24436661  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  24436660 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaat 24436561  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  24436560 ccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 22251388 - 22251600
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||  |||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  22251388 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttg 22251487  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22251488 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22251587  T
Q  206 ccgttgaatttgt 218  Q
    | |||||||||||    
T  22251588 ctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 17307575 - 17307373
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttag 128  Q
    |||||||||||   | |||||| || |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17307575 gaagaggagcaaaatcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 17307476  T
Q  129 gatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 228  Q
     |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17307475 catgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 17307376  T
Q  229 tgt 231  Q
    |||    
T  17307375 tgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 2523687 - 2523912
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||| ||||||| ||||||| | ||||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2523687 cagaaaagagaaaaatcttgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 2523786  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    ||||||||  ||||||||||||  ||||||||||||||| |||||| ||||||  ||||||||||| || |||||||||||| |||||||||||||||||    
T  2523787 tataattcttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaat 2523886  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     ||||||||||||| |||||||||||    
T  2523887 tcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 24516238 - 24516073
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||| ||||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 40912372 - 40912207
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 55 - 231
Target Start/End: Original strand, 19201189 - 19201365
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaa 154  Q
    |||||||||  |||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| | ||    
T  19201189 atcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaa 19201288  T
Q  155 tttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19201289 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  103 ttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaa 202  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  203 aatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 36841267 - 36841151
Alignment:
Q  115 gaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaat 214  Q
    |||||||||||||  |||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  36841267 gaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaat 36841168  T
Q  215 ttgtgtagaattgatgt 231  Q
    |||||||||||||||||    
T  36841167 ttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 27852776 - 27852605
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||| ||||    || |||||||||||| ||||||||||||||||||||||||| |    
T  27852776 cagagaagagaagaatcttgtgaaaagaggagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtgg 27852681  T
Q  106 tataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgta 180  Q
    |||||||| | ||||||| ||||  | |||||||||||| ||| ||| |||||| ||||||| ||| |||||||||    
T  27852680 tataattctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| |||| |||| ||||  | |||||||||||||||| ||| |||||| |||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| | |||||||| ||||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| |||||||||||||||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  68 aggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattagg 167  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||||||| ||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  168 ttttgaagttgtaattggttgtt 190  Q
    ||| |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaatt-gagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||||| |||| | || ||||  | |||||||||||||||| | | ||||||||||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 22502048 - 22501897
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtagg 139  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||  | |||||| || |||||  ||||  ||||||| ||    
T  22502048 tcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtggg 22501949  T
Q  140 ttgtagttatggaaatttgag-aattaggttttgaagttgtaattggttgtt 190  Q
    |||||||| |   |||||| | ||||||| || |||||||| ||||||||||    
T  22501948 ttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 22509982 - 22509831
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtagg 139  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||  | |||||| || |||||  ||||  ||||||| ||    
T  22509982 tcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtggg 22509883  T
Q  140 ttgtagttatggaaatttgag-aattaggttttgaagttgtaattggttgtt 190  Q
    |||||||| |   |||||| | ||||||| || |||||||| ||||||||||    
T  22509882 ttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 36841339 - 36841268
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggt 77  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36841339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggt 36841268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 21369405 - 21369316
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaa 95  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| |||||||||| |||||||||||| |||| | ||||||||||    
T  21369405 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaa 21369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 14179669 - 14179758
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| ||||||| | ||||||||||| ||||||||||| | |||||||||| |||||||||||| |||||||| |||| ||||    
T  14179669 agagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 31521281 - 31521197
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttc 90  Q
    |||||||||||||||||||| | ||||||||||| ||||||| ||||| ||||||||||||| |||||||||  | |||||||||    
T  31521281 cagagaagagaagaatcttgtgagaagaggagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttc 31521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 149476 - 149548
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    ||||||||||||| |||||||||| |||||||||||| | |||| |||||||||||  | |||||||||||||    
T  149476 tcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattc 149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 25046170 - 25046066
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| || |||||  ||||  |||||||||| ||||||| ||   |||| ||||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 25046071  T
Q  165 aggtt 169  Q
    |||||    
T  25046070 aggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  135 gtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgt 189  Q
    ||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 20916419 - 20916326
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattct 99  Q
    ||||||||||| |||||||  | ||||||||||| ||||||||||  | |||||||||||||| |||||||| | |||||| |||  |||||||    
T  20916419 cagagaagagaggaatcttatgagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttcaataattct 20916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||||||| | ||||||  ||||  | |||||||||| ||||| ||   |||||||||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  165 aggtt 169  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 14183414 - 14183496
Alignment:
Q  14 agaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||| | |||| | |||| |||| || | ||| ||||||||||||||||||||||| |||||||| |||| ||||    
T  14183414 agaagaatcttgtgagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21080969 - 21081006
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagt 21081006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 44072609 - 44072517
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtat-aattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttg 158  Q
    ||||||||||||  ||||||||||| ||||||||||| ||||| | || | ||||||| ||||| | |||||||||||||||| ||| ||||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaag-tgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttg 44072517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23801561 - 23801518
Alignment:
Q  53 caatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||| |||||||||||| |||||| |||||||||||    
T  23801561 caatcatctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 22260090 - 22259974
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||| ||  ||||||||||| ||||||||||| || || |||| | ||||||| ||||  | |||||||||||||||| | | |||||| |||||    
T  22260090 taaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaatt 22259993  T
Q  165 aggttttgaagttgtaatt 183  Q
    ||| || ||||||||||||    
T  22259992 aggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 24718127 - 24718086
Alignment:
Q  10 gaagagaagaatcttgcgtgaagaggagcattcttgtagagt 51  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  24718127 gaagagaagaatcttgtgagaagaggagcaatcttgtagagt 24718086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25184241 - 25184204
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  25184241 taaggtaagggtgagactaactttctctaattctaagt 25184204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 408 - 633
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||| |||||||||||| | |||||||| || ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  408 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 507  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  508 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 607  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
      ||||||||||||||||||||||||    
T  608 aagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 170; Significance: 2e-91; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 32106 - 31881
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  32106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 32007  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  32006 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 31907  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||| ||||||    
T  31906 tcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 37413 - 37188
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  37413 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 37314  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  37313 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 37214  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||||||||||| ||||||    
T  37213 tcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 77799 - 77574
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||| |||||||||||| | ||||||||| | ||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  77799 cagagaacagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttg 77700  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  77699 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaat 77600  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||| |||||||||    
T  77599 ccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 1316 - 1092
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | |||||| |||| | ||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1316 agagaagagaagaatcttgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 1217  T
Q  107 ataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 206  Q
    ||||||| |||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  1216 ataattctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatc 1117  T
Q  207 cgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||    
T  1116 cgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 42817849 - 42818072
Alignment:
Q  8 gagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgta 107  Q
    |||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  42817849 gagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgta 42817948  T
Q  108 taattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatcc 207  Q
    |||||| |||||||||||||| |||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  42817949 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatcc 42818048  T
Q  208 gttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||    
T  42818049 gttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 224
Target Start/End: Complemental strand, 19140870 - 19140659
Alignment:
Q  12 agagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataat 111  Q
    |||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19140870 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataat 19140772  T
Q  112 tcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 211  Q
    || |||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140771 tctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 19140672  T
Q  212 aatttgtgtagaa 224  Q
    |||||||||||||    
T  19140671 aatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 39935947 - 39936175
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||||||||||||| || | ||||| || || ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  39935947 cagagaagagaagaatcatgtgagaagaagaacagtcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttg 39936046  T
Q  106 tataattcggaaattgagtttaggatgtt---gtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaa 202  Q
    |||||||  |||||||||||||| |||||   ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  39936047 tataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaa 39936146  T
Q  203 aatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||| |||||||||    
T  39936147 aatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 20083638 - 20083803
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||||| ||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 20083803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 5082225 - 5082377
Alignment:
Q  79 ggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttg 178  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5082225 ggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttg 5082324  T
Q  179 taattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082325 taattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 5761596 - 5761421
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaa 154  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| ||    
T  5761596 atcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaa 5761498  T
Q  155 tttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5761497 tttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    ||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| |||||| |||| |||||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 6101753 - 6101918
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||| |||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    ||||||||  ||||||||||||||||||||| |||||||||||| |||||||| ||| | |||||||||||||||||||||  |||||||||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 18761559 - 18761448
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  18761559 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggt 18761460  T
Q  107 ataattcggaaa 118  Q
    ||||||| ||||    
T  18761459 ataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 20178593 - 20178695
Alignment:
Q  130 atgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 228  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20178593 atgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20178692  T
Q  229 tgt 231  Q
    |||    
T  20178693 tgt 20178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||    ||||| || ||     |||| ||||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgttgtgat-----tttgggaatta 20397600  T
Q  166 ggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 220  Q
    |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 22532132 - 22532292
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||| ||| ||||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 22536817 - 22536977
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||| ||| ||||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 23943766 - 23943866
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||| ||| | ||||||||||| |||||||||||||  |||||||||||||||||||||| ||  || ||||||||||||||||||||    
T  23943766 cagagaagagaagaattttgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttg 23943865  T
Q  106 t 106  Q
    |    
T  23943866 t 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 21579146 - 21579236
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||| |||| ||||    
T  21579146 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 36306109 - 36306019
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||    
T  36306109 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 22258249 - 22258353
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    ||||||||||||||||| | ||||| ||||| |||||||| |||| |||||||||||||||||||||||  ||||| |||||||||||  | ||||||||    
T  22258249 agaagagaagaatcttgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtat 22258348  T
Q  109 aattc 113  Q
    |||||    
T  22258349 aattc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 31722493 - 31722659
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaatt-gagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||  |||| | || ||||  | |||||||||||||||| ||| ||||||  ||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtc 232  Q
     ||||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||||| |||||    
T  31722593 tggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtc 31722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | |||| || ||||  | |||||||||| ||||| || ||||||| |||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    | |||| |||||||||||||||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 20022029 - 20022155
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaa 153  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| | |||| || ||||  | |||||||||||||||           
T  20022029 atcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt------- 20022121  T
Q  154 atttgagaattaggttttgaagttgtaattggttg 188  Q
     |||| ||||||||||| |||||||||||||||||    
T  20022122 -tttgggaattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | |||||||||||||||  |||  ||||||||||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  166 ggttt 170  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 18834533 - 18834444
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||| |||||||||||| | ||||||| ||| |||||||| | || ||||||||||||||||||||||| |||||| |||||||||||    
T  18834533 agagaaaagaagaatcttgtgagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||| | ||||||  ||||  | |||||||||||||||| | |  |||||||||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 4380606 - 4380669
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4380606 atcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 39694291 - 39694437
Alignment:
Q  80 gactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgt 179  Q
    ||||| |||||||||||| |||||||||| |||| |||| ||  ||||  | |||||||||||||||| ||| |||||| |||||||| || || |||||    
T  39694291 gactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagacgttgt 39694390  T
Q  180 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    |||| |||||    | |||||| |||| |||||||| ||||||||||    
T  39694391 aattagttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| ||| |||||||||||| |||| |||| |||| |||| ||||  | ||| ||||||||||||  || |||||| || ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 29762808 - 29762879
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggt 77  Q
    |||||||||  ||||||||| | ||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  29762808 cagagaagaagagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggt 29762879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 22208358 - 22208269
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| ||| |||||| || |||||||||| |||||||||||| |||||| |||||||||||  |  |||||||||||| ||||    
T  22208358 gaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 23419493 - 23419388
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaa-atttgagaat 163  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| || |||||  ||||  || ||||||| ||||||| ||||| |||| |||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagttttggaagatttaagaat 23419394  T
Q  164 taggtt 169  Q
    ||||||    
T  23419393 taggtt 23419388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||| || || |||||| ||||  | |||||||| ||||||| |||  ||||||||| |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 12037127 - 12037184
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaac 86  Q
    ||||||||||| ||| ||||||||| |||||||||| |||||||||||| ||||||||    
T  12037127 gaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 19700213 - 19700109
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||  | ||| |  ||||  |||||||||||||||||| ||   ||||||| |||    
T  19700213 taaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatttgaggatt 19700114  T
Q  165 aggtt 169  Q
    |||||    
T  19700113 aggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| | |||||| |||| |||||||||||||||| |||| | ||| ||  ||||  | |||||||||||||||| |||  |||||||||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  165 aggtt 169  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 17218755 - 17218649
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgag-tttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    ||||| ||||||| |||||||||||||||| ||||||||  |||||||| |||| | || ||||| |  ||||||||||| ||| ||   ||||||||||    
T  17218755 ttaagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaat 17218656  T
Q  164 taggttt 170  Q
    |||||||    
T  17218655 taggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 22345255 - 22345186
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||  |||||||||||   ||||||||||| |||||||||||| |||||| |||||||||||    
T  22345255 gaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 22356915 - 22356846
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||  |||||||||||   ||||||||||| |||||||||||| |||||| |||||||||||    
T  22356915 gaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 22583660 - 22583721
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagttta 127  Q
    |||||||||||| ||| |||| |||| |||||||| |||||||||||| |||||||| ||||    
T  22583660 taaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaattta 22583721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 23889851 - 23889790
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagttta 127  Q
    |||| |||||||  || |||||||||||||||||| |||||||||||| |||||||| ||||    
T  23889851 taagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaattta 23889790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 26454760 - 26454723
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagt 26454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaag 102  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 22254818 - 22254766
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||| ||| |||||||||||||||||||||||||  |||||||| ||||    
T  22254818 taaggtaatggtgggactaactttctctaattctaagtgttataattctgaaa 22254766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataa 110  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 36305908 - 36305837
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgt 136  Q
    |||| ||||||||  || ||||||||| ||||| || |||||||||||  |||||||||||||| |||||||    
T  36305908 ttaacgtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 21514754 - 21514696
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||  | |||||||||||||    
T  21514754 atcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattc 21514696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 12577931 - 12577880
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||||| ||||    
T  12577931 taaggtaagggtgggactaactttctctaataat-agttgtataattccgaaa 12577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 42265575 - 42265631
Alignment:
Q  132 gttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| ||| |||||| |||||||| || ||||||| || ||||||    
T  42265575 gttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 161; Significance: 6e-86; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 34450 - 34226
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | |||||| |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  34450 agagaagagaagaatcttgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgt 34351  T
Q  107 ataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 206  Q
     |||||| |||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||     
T  34350 ttaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatt 34251  T
Q  207 cgttgaatttgtgtagaattgatgt 231  Q
     ||||||||||||||||||||||||    
T  34250 tgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 6002 - 5898
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga-aatttgagaatt 164  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||| ||||  |||||||||| ||||||| ||||  |||| ||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagttttggaggatttaagaatt 5903  T
Q  165 aggtt 169  Q
    |||||    
T  5902 aggtt 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 11215 - 11439
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||| || || | | ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11215 cagagaagagaagaatcttgtgagaaaag-agtaatgttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11313  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11314 tatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 11413  T
Q  206 ccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||    
T  11414 ccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 21738 - 21958
Alignment:
Q  11 aagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataa 110  Q
    ||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||     
T  21738 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatag 21837  T
Q  111 ttcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgtt 210  Q
    ||| |||||||| ||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  21838 ttctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagtt 21937  T
Q  211 gaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||||||    
T  21938 gaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 58827 - 58880
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcat 59  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||| |||||    
T  58827 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcat 58880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 3234 - 3069
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||| ||||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  124 tttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 223  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  224 attgatgt 231  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 21300019 - 21300209
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggt 140  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||    
T  21300019 tcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtaggt 21300118  T
Q  141 tgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21300119 agtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 231
Target Start/End: Complemental strand, 19921732 - 19921525
Alignment:
Q  30 aagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttgga------ctaactttctctaattctaagttgtataattcggaaattgag 123  Q
    |||| ||||| ||| |||||| || |||||||||| |||||||||||| |||      ||| |||||||||||||||||||||||||||| |||||||||    
T  19921732 aagatgagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgag 19921633  T
Q  124 tttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 223  Q
    ||||  ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  19921632 tttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtaga 19921533  T
Q  224 attgatgt 231  Q
    ||||||||    
T  19921532 attgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 20566598 - 20566445
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||        ||||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg--------gaatta 20566507  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 215
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  57 catctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatt 156  Q
    |||||||| |||||||||||| ||| ||||||||||||||| || |||||||||||| |||||||||||||| ||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  157 tgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  61 taatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgag 160  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||||||| |    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  161 aattaggttttgaagttgtaattggttgtt 190  Q
    ||||| |||| |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 23199148 - 23199259
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||  |  |||||    
T  23199148 agagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 23199247  T
Q  107 ataattcggaaa 118  Q
    ||||||| ||||    
T  23199248 ataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 21398584 - 21398674
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||| |||||||||||| ||| || |||||||||||    
T  21398584 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21617928 - 21618047
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| ||   ||||||| ||||  | |||||||||||||||| ||| ||||||||||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  165 aggttttgaagttgtaattg 184  Q
    ||| || ||||||| |||||    
T  21618028 agggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||| ||||| |||| |||| |||| ||  ||||  |    ||||||||||||| ||||||||||  |||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| |||||||||||||||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 10954141 - 10954038
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||| |||  |||||||||||||| |||||  |||||||  ||||  |||||||||| ||||||| |||| |||| |||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 10954042  T
Q  166 ggtt 169  Q
    ||||    
T  10954041 ggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 22111881 - 22111762
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| |||||||| ||| ||||||||||||||| |  |||||||||||  |||||||||||||| ||||||| | ||||   | ||  ||||||||||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  165 aggttttgaagttgtaattg 184  Q
    ||||||| |||| |||||||    
T  22111781 aggttttcaagtcgtaattg 22111762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| || | ||||||  ||||  | |||||||||||||||| |||  | |||||||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  165 aggttt 170  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  135 gtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgt 189  Q
    ||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 266091 - 266053
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagt 103  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagt 266053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 32607280 - 32607346
Alignment:
Q  30 aagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||| ||| |||||| || || ||||||| |||||||||||| |||||| |||||||||||    
T  32607280 aagaggagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 17011780 - 17011743
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagt 17011743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggt 186  Q
    |||||||| |||||||  ||||  | ||| |||||||||||| | | |||||||||||||||||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 25249828 - 25249910
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagtt 147  Q
    |||||||||||| |||||||| |||| ||||| |||||| |||||||| | ||||||  ||||  |||||||||||| |||||    
T  25249828 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 25313612 - 25313694
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagtt 147  Q
    |||||||||||| |||||||| |||| ||||| |||||| |||||||| | ||||||  ||||  |||||||||||| |||||    
T  25313612 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 26762514 - 26762424
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||| |||||||||| | |||||| |||| ||||||||||| | |||   |||  |||||||||||| |||||||| |||| ||||    
T  26762514 cagagaagaaaagaatcttgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 26762424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 18744926 - 18744874
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| ||||||||||||||||||  |  |||||||||||| ||||    
T  18744926 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 190 - 25
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||| ||||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 12508 - 12693
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggt 140  Q
    ||||||||||||| ||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  12508 tcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttataggt 12607  T
Q  141 tgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12608 tgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggt 168  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  169 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 696 - 861
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||| ||||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 13392 - 13557
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| ||||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 134; Significance: 7e-70; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 168999 - 169164
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  62 aatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgaga 161  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||   |||||| ||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  162 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 174333 - 174243
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| | |||   |||  ||| |||||||| |||||||| |||| ||||    
T  174333 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaat 174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 570 - 405
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||  ||||||  |||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 146775 - 146610
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 24071 - 24235
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24071 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 24170  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttt 170  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  24171 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 128; Significance: 3e-66; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 55 - 231
Target Start/End: Original strand, 328277 - 328455
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattct--aagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga 152  Q
    |||||||||  |||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| || |||||||||||||    
T  328277 atcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatgga 328376  T
Q  153 aatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  328377 aatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 72909 - 72841
Alignment:
Q  153 aatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72909 aatttgtgaattaggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| |||||||| ||| ||||||||||||||  || |||||||||||| |||||||||| ||| ||||||| | |||||  | ||  |||||| |||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    |||||      ||||||||||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 110227 - 110121
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    |||| ||||||||  ||||||||||||||||||||||||  |||||||| | ||||||| ||||  | |||||||||||||||| |||  ||||||| ||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggat 110128  T
Q  164 taggttt 170  Q
    |||||||    
T  110127 taggttt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 73178 - 73092
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    |||||||||||  |||||||||||   || |||||||| |||||||||||| ||||||||||||||||||  | |||||||| ||||    
T  73178 gaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattc 73092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 1217 - 1052
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||| ||||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 231  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 78125 - 78298
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||| ||||||| ||||||| | ||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  78125 cagataagagaataatcttgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 78224  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgt 179  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  78225 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 79161 - 78955
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    ||||||||| |||||| ||| | ||||||||||| ||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  79161 cagagaagataagaattttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 79062  T
Q  106 tataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||| |||||||||||||| ||       |||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||    
T  79061 tataattctgaaattgagtttagcat-------gttgtagttatgg--------gaattaggttttgaagttgtaattggttgttaataaagtagaaaat 78977  T
Q  206 ccgttgaatttgtgtagaattg 227  Q
    || |||||||||||||||||||    
T  78976 ccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||| ||||||||||||||||||||||| |||| |||| ||  ||||  |  | |||| |||||||| |||||||||| ||||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
     |||| |||||||||||||||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 2666 - 2524
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||| || |||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  2666 agagaagagaagaatcttgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgt 2567  T
Q  107 ataattcggaaattgagtttaggatgttgtaggttgtagttat 149  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  2566 ataattctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 227
Target Start/End: Complemental strand, 19818 - 19652
Alignment:
Q  53 caatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatgga 152  Q
    |||||| | ||| ||||||||||||  |||| |||||||||||||||||||||||||||||  ||||||||||||| | |||||||| |||             
T  19818 caatcaaccaatctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgtg-------- 19727  T
Q  153 aatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||| ||| |||||| ||||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  166 ggttttgaagttgtaattggttgttaa 192  Q
    ||||||||||| |||||||||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 19316 - 19207
Alignment:
Q  9 agaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||| || ||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  19316 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtat 19217  T
Q  109 aattcggaaa 118  Q
    ||||| ||||    
T  19216 aattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggt 168  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||| ||  ||||  | || ||||||||||||| |||||||||  |||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  169 tttgaagttgtaattggttgtt 190  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 2941 - 2787
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||| |||||||||||||| ||||||| | ||||         |||||| ||||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  166 ggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 227  Q
    ||||||||| | || ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 5745 - 5633
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 105  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||  |  ||||    
T  5745 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 5646  T
Q  106 tataattcggaaa 118  Q
    |||||||| ||||    
T  5645 tataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 112966 - 113127
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa--ttgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    |||| ||||||| |||||||||||||||||||||||||  ||||| || ||||  |||| ||||  | ||||||||||||| || ||| |||||| ||||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  164 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    ||||||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 81620 - 81501
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    ||||||||||||| |||||||| ||| |||||||||| | | || ||||  ||| |||| ||||  | |||||||||||||||| ||| |||||| ||||    
T  81620 ttaaggtaagggtgggactaaccttcactaattctaaatgg-atgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 81522  T
Q  164 taggttttgaagttgtaattg 184  Q
    ||||||| |||||||||||||    
T  81521 taggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 117807 - 117960
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgg--aaattgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| || |  ||||||| ||||  | |||| || ||||        || |||| ||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgt--------aattttgggaat 117898  T
Q  164 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    ||||||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||||    
T  117899 taggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaatt 117960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||  ||||  | || ||||  ||||||| |||||||||| ||||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| || ||||||||||||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 23832 - 23922
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||| |||||||||||    
T  23832 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  72 aagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtttt 171  Q
    |||||| ||||||| ||| |||||||||||||||||| |||| |||| ||  ||||  |||| ||||||||||||| ||||||||||  ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  172 gaagttgtaattggttgtt 190  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 17915 - 17992
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  17915 tcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 10755 - 10913
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||  |||| ||  ||||  | |||||||||| ||||| ||| |||||| ||||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 226  Q
    || || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 5045 - 5087
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtat 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtat 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 56; Significance: 3e-23; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 19759 - 19605
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| ||||| || ||| ||| ||||||||||  || ||| |||||||| |||||||||||||| ||||||| | ||||   | ||  ||||||||||||    
T  19759 ttaacgtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaatt 19660  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 220  Q
    ||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19659 aggttatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| ||| ||||||||||||||  || |||||||||||| |||||||||||| | ||||||| | ||||         |||||| |||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgtg--------aatttgggaattacgtt 5219  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||||||| ||| ||||||||||||||  || ||||||| |||| |||||||||||| | ||||||| | ||||         |||||| ||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgtg--------aatttgggaattaggtt 11339  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 5543 - 5454
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| ||| |||||| ||||||||||||| |||||||||||| |||||| |||||||||||  | ||||||||||||| ||||    
T  5543 gaagaggagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 19945 - 19878
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| ||| |||||  || |||||||||| |||||||||||| ||||||  ||||||||||    
T  19945 gaagaggagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 11705 - 11639
Alignment:
Q  29 gaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaa 95  Q
    ||||||||||| ||| | |||| || |||||||||| |||| ||||||| ||||||| |||||||||    
T  11705 gaagaggagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaa 11639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 61823 - 61900
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||| ||| |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  61823 tcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 13493 - 13572
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaac 86  Q
    ||||||||||||||||||| | ||||||||  | ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13493 agagaagagaagaatcttgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 1047 - 1181
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaa 153  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||  |||||||| | ||||||| ||||  | ||||||||||| |||| ||  |    
T  1047 atcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgaga 1146  T
Q  154 atttgagaattaggttttgaagttgtaattggttg 188  Q
    ||||| || ||||| || |||||||||||| ||||    
T  1147 atttgggatttagggttagaagttgtaattagttg 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 11059 - 10969
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||| | ||||||||||| ||||||||| ||  |||||||||| |||||||||||| | |||| |||||||||||    
T  11059 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 10851 - 10741
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| |||||||| ||| ||||||||||||||| || |||||||||||| |||||||||||||| ||||||| | ||||         |||||| |||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  165 aggttttgaagttgtaatt 183  Q
    |||||||||||||||||||    
T  10759 aggttttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 4709 - 4830
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||| ||||  | ||||||||||| ||||   | ||||||  ||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||| ||||||    
T  4809 aggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaat 163  Q
    ||||| ||||||| ||| |||| ||| |||||||||||| |||| |||  |||| |||| ||||  |||||||||||||||||| |||||||||| ||||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||||||  ||||||||||||||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 217
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggt 168  Q
    |||||||| ||| ||||||||| ||||| || |||||||||||| |||| |||||||||| ||||||| | ||||         |||||| |||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgtg--------aatttgggaattaggt 26729  T
Q  169 tttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttg 217  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 2396 - 2506
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgt 106  Q
    |||||||||| |||||||| | |||||| |||| ||||||| ||||| | ||||||||||||||||||||| |||||| |||||||||||  |  |||||    
T  2396 agagaagagaggaatcttgtgagaagag-agcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 2494  T
Q  107 ataattcggaaa 118  Q
    ||||||| ||||    
T  2495 ataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| ||| |||||||||||| ||||||||| |||| |||| ||||  | |||||||||||||||| ||| |||||| |||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  165 aggttttgaagttgtaattggtt 187  Q
    ||  || ||||||| ||||||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 12380 - 12323
Alignment:
Q  132 gttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgt 189  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  12380 gttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgag-aat 163  Q
    |||||||||||| |||||||| ||| ||||||||||| ||||| |||| | ||||||| ||||  | |||||||||||||||| ||| |||||| | |||    
T  8694 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttg-agaat 163  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||| |||| |||  |||   |||||||||||| ||||| ||| |||||| | |||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 60947 - 60843
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||| |  ||||||| |||| ||||||||||||||||||||| || |||||| ||||  |||||||||||||||||| ||   |||||||||||    
T  60947 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 60848  T
Q  165 aggtt 169  Q
    |||||    
T  60847 aggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 2189 - 2252
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  2189 atcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 6619 - 6686
Alignment:
Q  152 aaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6619 aaatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 28662 - 28583
Alignment:
Q  7 agagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaac 86  Q
    |||||||| || ||||||| | ||||||||||| ||||||||||||| |||||||||| ||||||||| || ||||||||    
T  28662 agagaagaaaataatcttgtgagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 126305 - 126407
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    |||||||||| | |||||||||||||||||||||||||||||| |||| |||||||  ||||  | ||||||| |||||||| ||   ||||||||||||    
T  126305 taaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaatta 126403  T
Q  166 ggtt 169  Q
    ||||    
T  126404 ggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 5294 - 5352
Alignment:
Q  55 atcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattc 113  Q
    |||||||||  |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  5294 atcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattc 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 11100 - 11190
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||||||||||  | |||||| |||| |||| ||| |||| |||| |||||||||||||||| | |||||| |||||||||||    
T  11100 cagagaagagaagaatcttctgagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 20006 - 19905
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||| | ||||||  ||||  | |||||||||||||||| |||  |||||||||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatt 19908  T
Q  165 agg 167  Q
    |||    
T  19907 agg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  67 aaggtaagggttggactaactttctctaattctaagttgtataattcggaaa-ttgagtttaggatgttgtaggttgtagttatggaaatttgagaatta 165  Q
    ||||||||||| |||||||| |||  ||||||||||| |||| |||| |||| |||| ||||  | |||||||||||||||| ||| |||||  ||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  166 ggttttgaagttgtaattggttg 188  Q
    || || |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  71 taagggttggactaactttctctaattctaagttgtataattcggaaatt 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15324 - 15272
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 18615 - 18670
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  18615 tcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  74 gggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgt 136  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||  |||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 20086 - 20202
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||  |||||||| ||| ||||||||||| |||||||||| | ||||||| ||||  | |||||||||| ||||| ||| |||||| |||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaag-tgtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  165 aggttttgaagttgtaatt 183  Q
    | |||| ||||||||||||    
T  20184 atgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||||| | ||||||  ||||  |  ||||||||||||||| | | |||||| ||||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 4992 - 4888
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||| || | |||  ||||  |||||||||| ||||||| ||   |||| ||||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatttaagaatt 4893  T
Q  165 aggtt 169  Q
    |||||    
T  4892 aggtt 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 4437 - 4333
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||| | | |||||||| |||| ||||||||||||||||||||| || || ||  ||||  |||||||||||||||||| ||   |||||||||||    
T  4437 taaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatt 4338  T
Q  165 aggtt 169  Q
    |||||    
T  4337 aggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 398614 - 398510
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||| |||| |||||||| |||||||||||| || |||||  ||||  |||||||||| ||||||| ||   |||| ||||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 398515  T
Q  165 aggtt 169  Q
    |||||    
T  398514 aggtt 398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  81 actaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggttttgaagttgta 180  Q
    |||||| ||| ||||| |||||| |||| ||||  ||||||| ||||  | ||| |||||||| ||| ||| |||||||||||||||||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  181 attggttg 188  Q
    ||| ||||    
T  4619 attagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 96446 - 96347
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagttgtataattcggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaattaggtt 169  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||| |||| ||  ||||  | |||||||||||||||| ||   ||| ||||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggagaattaggtt 96347  T

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Target: scaffold0601 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 195 - 233
Alignment:
Q  65 ttaaggtaagggttggactaactttctctaattctaagt 103  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0371 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 10386 - 10476
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||| ||||||| | ||||||||||| ||||||||||| | |||   |||  |||||||||||| |||||||| |||| ||||    
T  10386 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 10476  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 127304 - 127373
Alignment:
Q  29 gaagaggagcattcttgtagagtcc--aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    |||||||||||  |||||||||||   ||||||||||| |||||||||||| |||||| |||||||||||    
T  127304 gaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

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Target: scaffold0676 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 2958 - 2881
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||||  ||||| |||| |||||||||||| |||||| |||||||||||  |  |||||||||||| ||||    
T  2958 tcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

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Target: scaffold0515 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0436 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 9012 - 8975
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagt 8975  T

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Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 12001 - 11956
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagt 51  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||    
T  12001 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagt 11956  T

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Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21149 - 21112
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagt 21112  T

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Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 34164 - 34127
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagt 34127  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 2050 - 2005
Alignment:
Q  6 cagagaagagaagaatcttgcgtgaagaggagcattcttgtagagt 51  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||    
T  2050 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagt 2005  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 69853 - 69890
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagt 69890  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 52544 - 52648
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattcgga-aattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||| ||||||| |||||||| |||  |||||||||||||| |||||| || |||||  ||||  |||||||||| ||||||| ||   |||||||||||    
T  52544 taagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaatt 52643  T
Q  165 aggtt 169  Q
    |||||    
T  52644 aggtt 52648  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 29440 - 29340
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagttgtataattc-ggaaattgagtttaggatgttgtaggttgtagttatggaaatttgagaatt 164  Q
    |||||||||||| |||||||  |||| |||||||||||||||| |||| | ||| ||  ||||  | |||||||||||||||| |||  |||||||||||    
T  29440 taaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 29341  T
Q  165 a 165  Q
    |    
T  29340 a 29340  T

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Target: scaffold0878 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 3410 - 3452
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  3410 aatcatctaatctaaggtaagggtgggactagctttctctaat 3452  T

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Target: scaffold0505 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 5000 - 4958
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaat 96  Q
    ||||||||||| |||||||||||| |||||| |||||||||||    
T  5000 aatcatctaatataaggtaagggtgggactagctttctctaat 4958  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 6416 - 6383
Alignment:
Q  70 gtaagggttggactaactttctctaattctaagt 103  Q
    |||||||| |||||||||||||||||||||||||    
T  6416 gtaagggtgggactaactttctctaattctaagt 6383  T

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Target: scaffold0046 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21777 - 21814
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    |||||||||| | |||||||||||||||||||||||||    
T  21777 taaggtaaggatgggactaactttctctaattctaagt 21814  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 29216 - 29253
Alignment:
Q  66 taaggtaagggttggactaactttctctaattctaagt 103  Q
    ||||||||| || |||||||||||||||||||||||||    
T  29216 taaggtaagagtgggactaactttctctaattctaagt 29253  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  69 ggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||| ||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 158888 - 158949
Alignment:
Q  132 gttgtaggttgtagttatggaaatttgagaattaggttttgaagttgtaattggttgttaat 193  Q
    |||||||||||||||| ||| |||||| |||||||| || ||||||| || |||||| ||||    
T  158888 gttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttgataat 158949  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 11230 - 11194
Alignment:
Q  41 tcttgtagagtccaatcatctaatttaaggtaagggt 77  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  11230 tcttgtagagtccgatcatctaatctaaggtaagggt 11194  T

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Target: scaffold0061 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 14574 - 14638
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||  |  |||||||||||| ||||    
T  14574 aatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

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Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 23632 - 23696
Alignment:
Q  54 aatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattcggaaa 118  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||  |  |||||||||||| ||||    
T  23632 aatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

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