View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_466 (Length: 241)
Name: NF10954A_low_466
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_466 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 55316217 - 55316457
Alignment:
| Q |
1 |
gaaggagttgtcacaaaattgccattcgtacccactaaatactacaagcctacataattcccttcagcatttctcctttgttgactaattttcctacaga |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55316217 |
gaaggagttgtcacaaaaatgccattcgtacccactaaatactacaagcctacataattcccttcagcatttctcctttgttgactaattttcctacaga |
55316316 |
T |
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| Q |
101 |
gtgttacattacataaaggttaatgtcattattatgtttctcacatcaagtacaaggcttcatcttggttaataactcaatttcattttaaacattgtac |
200 |
Q |
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| T |
55316317 |
gtgttacattacataaaggttaatgtcattattatgtttctcacatcaagtacaaggcttcatcttggttaataactcaatttcattttaaacattgtac |
55316416 |
T |
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| Q |
201 |
tgcttgaacttgatgttatcatgaaattttcctatattttt |
241 |
Q |
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| T |
55316417 |
tgcttgaacttgatgttatcatgaaattttcctatattttt |
55316457 |
T |
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