View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_502 (Length: 235)
Name: NF10954A_low_502
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_502 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 12098474 - 12098695
Alignment:
| Q |
14 |
agacgaagaacggctaccaaaccaatgacttatgaaccttaaaattgtgaaaatatgacacgaaacaaactgcctacaatcagaggcgaaggtcactaaa |
113 |
Q |
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| T |
12098474 |
agacgaagaacggctaccaaaccaatgacttatgaacctcaaaattgtgaaaatatgacacgaaacaaactgcctacaatcagaggcgaaggtcactaaa |
12098573 |
T |
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| Q |
114 |
agcaaccaagacctagtgaaaccaacagaagtagctgaaaagcatcaagcctcaccttaccaatttgacagttcaacccaactaacaaatttcaagaaca |
213 |
Q |
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| T |
12098574 |
agcaaccaagacctagtgaaaccaacaaaagtagctgaaaagcatcaagcctcaccttaccaatttgacagttcaacccaactaacaaatttcaagaaca |
12098673 |
T |
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| Q |
214 |
taacagggccagacaaaaattg |
235 |
Q |
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|||||||||||||||||||||| |
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| T |
12098674 |
taacagggccagacaaaaattg |
12098695 |
T |
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