View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_523 (Length: 231)
Name: NF10954A_low_523
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_523 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 1139183 - 1138998
Alignment:
| Q |
31 |
cttggaactgcaaattgggagtaaaagaaggatataaaaaactaaccagtttggcaaagatctcatcattctctttcttgcatgacagaggcttcaagga |
130 |
Q |
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| T |
1139183 |
cttggaactgcaaattgggagtaaaagaaggatataaaaaactaaccagtttggcaaagatctcgtcattctctttcttgcatgacagaggcttcaagga |
1139084 |
T |
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| Q |
131 |
ttcaaactccttggtatccacctttcttcctccatcagtcttaacattcagggctttccttttctcctccagcactttctcatatt |
216 |
Q |
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| T |
1139083 |
ttcaaactccttggtatccacctttcttcctccatcagtcttaacattcagggctttccttttctcctccagcactttctcatatt |
1138998 |
T |
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