View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_570 (Length: 229)

Name: NF10954A_low_570
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_570
NF10954A_low_570
[»] chr6 (11 HSPs)
chr6 (1-229)||(2281003-2281231)
chr6 (6-229)||(33004586-33004810)
chr6 (1-229)||(29371878-29372106)
chr6 (1-229)||(29369322-29369551)
chr6 (1-229)||(24458719-24458948)
chr6 (1-186)||(29924870-29925056)
chr6 (23-199)||(349252-349429)
chr6 (128-229)||(33045718-33045819)
chr6 (1-90)||(33045622-33045712)
chr6 (185-229)||(25971034-25971078)
chr6 (185-229)||(25975474-25975518)
[»] chr4 (16 HSPs)
chr4 (1-229)||(16909117-16909345)
chr4 (1-229)||(28389464-28389692)
chr4 (1-229)||(21382711-21382938)
chr4 (1-229)||(52682794-52683022)
chr4 (1-229)||(30387840-30388068)
chr4 (1-229)||(41859683-41859911)
chr4 (1-229)||(29359024-29359252)
chr4 (13-224)||(25839384-25839596)
chr4 (1-229)||(19515037-19515266)
chr4 (1-229)||(21581427-21581656)
chr4 (1-229)||(42347800-42348029)
chr4 (1-229)||(53288370-53288599)
chr4 (1-229)||(31448264-31448497)
chr4 (172-229)||(8121118-8121175)
chr4 (172-229)||(36895635-36895692)
chr4 (172-229)||(26602392-26602449)
[»] chr2 (28 HSPs)
chr2 (1-229)||(1512834-1513062)
chr2 (1-229)||(207808-208036)
chr2 (1-229)||(40605430-40605658)
chr2 (1-229)||(5013377-5013605)
chr2 (1-229)||(26455968-26456196)
chr2 (1-229)||(13908322-13908550)
chr2 (1-229)||(13905390-13905618)
chr2 (13-224)||(25647579-25647791)
chr2 (1-229)||(6123773-6124003)
chr2 (1-229)||(27997300-27997529)
chr2 (1-229)||(28098670-28098899)
chr2 (13-224)||(2300884-2301096)
chr2 (1-229)||(36437452-36437681)
chr2 (1-229)||(1916618-1916847)
chr2 (1-229)||(35431984-35432213)
chr2 (1-229)||(19821965-19822194)
chr2 (1-229)||(19842186-19842415)
chr2 (1-229)||(20890741-20890970)
chr2 (6-229)||(42109284-42109508)
chr2 (1-199)||(1273025-1273224)
chr2 (1-116)||(21588954-21589069)
chr2 (128-229)||(184194-184295)
chr2 (128-229)||(2449428-2449529)
chr2 (128-229)||(976023-976122)
chr2 (1-90)||(184301-184391)
chr2 (1-90)||(975927-976017)
chr2 (6-90)||(2449535-2449620)
chr2 (172-229)||(23455676-23455733)
[»] chr8 (12 HSPs)
chr8 (1-229)||(23827820-23828048)
chr8 (1-229)||(14994290-14994518)
chr8 (3-229)||(22729699-22729925)
chr8 (3-229)||(41376233-41376459)
chr8 (1-229)||(19961689-19961917)
chr8 (1-229)||(405973-406202)
chr8 (13-224)||(18265823-18266035)
chr8 (13-224)||(18274836-18275048)
chr8 (1-178)||(21639991-21640168)
chr8 (6-229)||(37983261-37983485)
chr8 (1-229)||(18492361-18492589)
chr8 (1-229)||(24011667-24011894)
[»] chr7 (17 HSPs)
chr7 (1-229)||(26168904-26169132)
chr7 (1-229)||(45115890-45116118)
chr7 (1-229)||(7893817-7894045)
chr7 (1-229)||(32660284-32660512)
chr7 (1-212)||(20955569-20955780)
chr7 (1-229)||(22007040-22007268)
chr7 (1-229)||(32038503-32038733)
chr7 (1-229)||(27716004-27716232)
chr7 (1-229)||(29956537-29956766)
chr7 (1-229)||(17696975-17697204)
chr7 (1-229)||(16719960-16720190)
chr7 (1-228)||(31100199-31100427)
chr7 (1-229)||(13398223-13398452)
chr7 (1-229)||(46909408-46909636)
chr7 (1-229)||(5093630-5093859)
chr7 (128-229)||(7888927-7889028)
chr7 (1-90)||(7889034-7889124)
[»] chr3 (27 HSPs)
chr3 (1-229)||(36087400-36087628)
chr3 (1-229)||(38655733-38655961)
chr3 (1-229)||(18198777-18199005)
chr3 (1-229)||(26951581-26951809)
chr3 (1-229)||(35716383-35716611)
chr3 (1-229)||(49562219-49562447)
chr3 (1-229)||(31487298-31487525)
chr3 (5-229)||(36091242-36091466)
chr3 (5-229)||(854649-854875)
chr3 (1-229)||(36946966-36947195)
chr3 (1-229)||(13454692-13454921)
chr3 (1-229)||(16651494-16651723)
chr3 (1-229)||(4594186-4594415)
chr3 (1-229)||(12260901-12261131)
chr3 (1-229)||(52418604-52418833)
chr3 (6-229)||(12825274-12825498)
chr3 (1-212)||(859926-860138)
chr3 (6-229)||(11826550-11826774)
chr3 (1-229)||(33003697-33003923)
chr3 (1-135)||(29864635-29864770)
chr3 (1-150)||(47726776-47726925)
chr3 (128-229)||(26947922-26948023)
chr3 (1-90)||(26948029-26948119)
chr3 (1-77)||(43508690-43508767)
chr3 (172-229)||(36006259-36006316)
chr3 (185-229)||(18256307-18256351)
chr3 (172-229)||(53521046-53521103)
[»] chr1 (24 HSPs)
chr1 (1-229)||(2045059-2045287)
chr1 (1-229)||(45503343-45503571)
chr1 (1-229)||(48651079-48651306)
chr1 (1-229)||(13926112-13926340)
chr1 (1-229)||(50708936-50709164)
chr1 (1-229)||(2047309-2047538)
chr1 (1-229)||(36866720-36866949)
chr1 (6-229)||(49787173-49787395)
chr1 (6-229)||(38210808-38211032)
chr1 (6-229)||(45501102-45501326)
chr1 (1-229)||(29245515-29245744)
chr1 (12-229)||(26211715-26211932)
chr1 (1-229)||(48960787-48961015)
chr1 (1-229)||(15691533-15691762)
chr1 (1-229)||(39513065-39513294)
chr1 (128-229)||(7480573-7480674)
chr1 (128-229)||(9533949-9534050)
chr1 (128-229)||(42496657-42496758)
chr1 (1-90)||(42496764-42496854)
chr1 (6-90)||(7480680-7480765)
chr1 (6-90)||(9534056-9534141)
chr1 (1-77)||(36461625-36461702)
chr1 (172-229)||(8256827-8256884)
chr1 (192-229)||(21056875-21056912)
[»] scaffold0121 (1 HSPs)
scaffold0121 (4-229)||(45637-45862)
[»] scaffold0097 (4 HSPs)
scaffold0097 (1-229)||(51728-51955)
scaffold0097 (3-229)||(48907-49133)
scaffold0097 (128-229)||(40382-40483)
scaffold0097 (1-90)||(40286-40376)
[»] chr5 (18 HSPs)
chr5 (1-229)||(32674958-32675186)
chr5 (1-229)||(30090163-30090392)
chr5 (1-229)||(3607748-3607977)
chr5 (1-229)||(20104904-20105132)
chr5 (128-229)||(12655280-12655381)
chr5 (128-229)||(23184065-23184166)
chr5 (128-229)||(23188332-23188433)
chr5 (128-229)||(34761326-34761427)
chr5 (128-229)||(39878160-39878261)
chr5 (1-90)||(12655387-12655477)
chr5 (1-90)||(23184172-23184262)
chr5 (1-90)||(23188439-23188529)
chr5 (1-90)||(34761433-34761523)
chr5 (1-90)||(39878267-39878357)
chr5 (172-229)||(38095492-38095549)
chr5 (192-229)||(38936314-38936351)
chr5 (182-229)||(37609743-37609790)
chr5 (172-229)||(16678746-16678803)
[»] scaffold0642 (1 HSPs)
scaffold0642 (1-229)||(3459-3688)
[»] scaffold0345 (1 HSPs)
scaffold0345 (1-229)||(13371-13600)
[»] scaffold0105 (1 HSPs)
scaffold0105 (1-229)||(25381-25610)
[»] scaffold0374 (1 HSPs)
scaffold0374 (14-229)||(2031-2247)
[»] scaffold0119 (2 HSPs)
scaffold0119 (1-199)||(34268-34467)
scaffold0119 (1-199)||(27867-28066)


Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2281231 - 2281003
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2281231 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 2281132  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2281131 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 2281032  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  2281031 cggaaaacttctctgtagaccacatttga 2281003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 33004586 - 33004810
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| ||||  ||||||||||| |||    
T  33004586 tgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttatgttactttaacata 33004685  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33004686 acatataattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 33004785  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||| | ||||||||||||||    
T  33004786 aaacttctttgtagaccacatttga 33004810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29371878 - 29372106
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  |||  ||| |||||||||||    
T  29371878 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgc-gtttctgttacttta 29371976  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371977 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 29372076  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  29372077 acggaaaacttctttgtagaccacatttga 29372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29369322 - 29369551
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||||||| || ||||||||| |  | |||||||||||||||||||||||||||  ||| | || |||||||||||    
T  29369322 tcgcttgaatgtaaaaattgtcgtgaatcaaaacataatgtcaattatgatagactttgttattgttccataattctaagacgcaatttctgttacttta 29369421  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29369422 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 29369521  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  29369522 acggaaaacttctttgtagaccacatttga 29369551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24458948 - 24458719
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| | |||||| ||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| ||||  ||||||||||    
T  24458948 tcgcttgaatgttaaaattttcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttatgttacttta 24458849  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24458848 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacatt 24458749  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | || |||||||||||    
T  24458748 acggaaaacttctttgtacaccacatttga 24458719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 29925056 - 29924870
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  29925056 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccataggctttgttattgttccataattctagtacgtagttcttgttacttta 29924957  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaa 186  Q
    | ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29924956 acataacatataattttaaaagggaaactgaaattcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaa 29924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 349429 - 349252
Alignment:
Q  23 gtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatataattttgaaag 121  Q
    |||||||||| || ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  349429 gtgaatcaaaacataatgtcaattaccatatactttgttattgttccataattctagtacgtagttcctgttactttaatataacatataattttaaaag 349330  T
Q  122 ggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  349329 ggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 349252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 33045718 - 33045819
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  33045718 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 33045817  T
Q  228 ga 229  Q
    ||    
T  33045818 ga 33045819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33045622 - 33045712
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  33045622 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 33045712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 25971034 - 25971078
Alignment:
Q  185 aaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  25971034 aaagtgctacacattacggaaaacttctctctagaccacatttga 25971078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 25975474 - 25975518
Alignment:
Q  185 aaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  25975474 aaagtgctacacattacggaaaacttctctctagaccacatttga 25975518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16909345 - 16909117
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16909345 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatatcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 16909246  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16909245 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 16909146  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  16909145 cggaaaacttctctgtagaccacatttga 16909117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 28389692 - 28389464
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28389692 tcgcgtgaatctaaaaattgttgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 28389593  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28389592 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtccaacacatta 28389493  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  28389492 cggaaaacttctctgtagaccacatttga 28389464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21382938 - 21382711
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21382938 tcgcgtgaatctaaaaattgtcgtgaatgaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtatgtagttcctgttactttaa 21382839  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21382838 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacatta 21382740  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||||||||||||||||    
T  21382739 cggaaaacttctctatagaccacatttga 21382711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 52683022 - 52682794
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52683022 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 52682923  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52682922 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 52682823  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  52682822 cggaaaacttctctgtagaccacatttga 52682794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30387840 - 30388068
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  30387840 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagcacgtagttcctgttactataa 30387939  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30387940 aataacatataattttgaaaggaaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 30388039  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  30388040 cggaaaacttctctgtagaccacatttga 30388068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 41859683 - 41859911
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41859683 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacatagttcctgttactttaa 41859782  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  41859783 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcttacacatta 41859882  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    || |||||||| || ||||||||||||||    
T  41859883 cgaaaaacttcactgtagaccacatttga 41859911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29359024 - 29359252
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  29359024 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattatttcataattctagtacgtagttcctgttactttaa 29359123  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29359124 aataacatataattttggaaggcaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacaatacacaaaaaagtcctacacatta 29359223  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||| | ||||||||||||||    
T  29359224 cggaaaacttctttgtagaccacatttga 29359252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 25839596 - 25839384
Alignment:
Q  13 aaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatata 111  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25839596 aaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattactttaacataacatata 25839497  T
Q  112 attttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 211  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25839496 attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttt 25839397  T
Q  212 tctatagaccaca 224  Q
    ||| |||||||||    
T  25839396 tctgtagaccaca 25839384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 19515037 - 19515266
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19515037 tcgcttgaatgtaaaaattatcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattacttta 19515136  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19515137 acataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 19515236  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    |||| |||||||||| |||| |||| ||||    
T  19515237 acgggaaacttctctgtagatcacacttga 19515266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 21581427 - 21581656
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21581427 tcgcttgaatgtaaaaattatcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattacttta 21581526  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21581527 acataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 21581626  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    |||| |||||||||| |||| |||| ||||    
T  21581627 acgggaaacttctctgtagatcacacttga 21581656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 42348029 - 42347800
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | ||||||| |||||||||||||||||||  ||| ||||  ||||||||||    
T  42348029 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttattattgttccataattctaagacgcagtttttgttacttta 42347930  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42347929 acataacatataattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 42347830  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  42347829 acggaaaacttctttgtagaccacatttga 42347800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 53288599 - 53288370
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  |||   || |||||| ||||    
T  53288599 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcgatttctgttatttta 53288500  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  53288499 acataacatataattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacacatt 53288400  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    || |||||||||| | ||||||||||||||    
T  53288399 acagaaaacttctttgtagaccacatttga 53288370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31448264 - 31448497
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||| |||| || ||||||||| || | |||||||||||||||||||||||||||  ||| |||| || ||||||||    
T  31448264 tcgcttgaatgtaaaaattgtcgtgaagcaaaacataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttctattacttta 31448363  T
Q  100 aaataacatataattttg--aaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaa--gtcctaca 195  Q
    | |||||||||||||||   ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||    
T  31448364 acataacatataattttttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaaagctcctaca 31448463  T
Q  196 cattacggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||||| | ||||||||||||||    
T  31448464 cattacggaaaacttctttgtagaccacatttga 31448497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8121175 - 8121118
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| |||||||||||||||||||||||| ||||||| ||||||    
T  8121175 aatactacaaaacaaagtgctacacattacggaaaacttctctgtagaccatatttga 8121118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 36895635 - 36895692
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| ||| |||||||||||||||||||| ||||||||||||||    
T  36895635 aatactacaaaacaaagtgctaaacattacggaaaacttctctgtagaccacatttga 36895692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 26602392 - 26602449
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| ||||||||||  |||||||||||| ||||||||||||||    
T  26602392 aatactacaaaacaaagtgctacacattatagaaaacttctctgtagaccacatttga 26602449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1513062 - 1512834
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1513062 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 1512963  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1512962 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 1512863  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  1512862 cggaaaacttctctgtagaccacatttga 1512834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 208036 - 207808
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  208036 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 207937  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  207936 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 207837  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  207836 cggaaaacttctctgtagaccacatttga 207808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 40605658 - 40605430
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40605658 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 40605559  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40605558 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 40605459  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  40605458 cggaaaacttctctgtagaccacatttga 40605430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5013377 - 5013605
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5013377 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 5013476  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5013477 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 5013576  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    || ||||||||||| ||||||||||||||    
T  5013577 cgaaaaacttctctgtagaccacatttga 5013605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26456196 - 26455968
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26456196 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagtttctgttactttaa 26456097  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  26456096 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtactacacatta 26455997  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  26455996 cggaaaacttctctgtagaccacatttga 26455968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13908550 - 13908322
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13908550 tcgcatgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgtttttgttccataattctagtacgtagttcctgttactttaa 13908451  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13908450 aataatatataattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 13908351  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||| ||||||||||||||||||    
T  13908350 cggaaaacttttctatagaccacatttga 13908322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13905618 - 13905390
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13905618 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 13905519  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  13905518 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacatatt 13905420  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||| ||||    
T  13905419 acggaaaacttctctgtagaccacacttga 13905390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 25647791 - 25647579
Alignment:
Q  13 aaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatata 111  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25647791 aaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattactttaacataacatata 25647692  T
Q  112 attttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 211  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25647691 attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttt 25647592  T
Q  212 tctatagaccaca 224  Q
    ||| |||||||||    
T  25647591 tctgtagaccaca 25647579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6124003 - 6123773
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6124003 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 6123904  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacacat 198  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6123903 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacat 6123804  T
Q  199 tacggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||| |||| |||| ||||    
T  6123803 tacggaaaacttctctgtagatcacacttga 6123773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 27997300 - 27997529
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| || |||||| || | |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27997300 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataaggtcaattacgatagactttgttattgttccataattctaagacgcagttcctgttacttta 27997399  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27997400 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagttctacacatt 27997499  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||||||||    
T  27997500 acggaaaacttctctgtagaccacatttga 27997529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 28098670 - 28098899
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| || |||||| || | |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  28098670 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataaggtcaattacgatagactttgttattgttccataattctaagacgcagttcctgttacttta 28098769  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28098770 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagttctacacatt 28098869  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||||||||    
T  28098870 acggaaaacttctctgtagaccacatttga 28098899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 2301096 - 2300884
Alignment:
Q  13 aaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatata 111  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  2301096 aaaaattatcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattactttaacaaaacatata 2300997  T
Q  112 attttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 211  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2300996 attttaaaagggaaactgaagttcgttgatatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttt 2300897  T
Q  212 tctatagaccaca 224  Q
    ||| |||||||||    
T  2300896 tctgtagaccaca 2300884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36437452 - 36437681
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  36437452 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttctgttacttta 36437551  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36437552 acataacatataattttaaaagggaaactgaagttcgttgacatacaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 36437651  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  36437652 acggaaaacttctttgtagaccacatttga 36437681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1916618 - 1916847
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| ||||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  1916618 tcgcttgaatgtaaaaattatcgtgaatcaaagaataatgtcaattaccatagactttgttattgttccataattctaagacgcagttcctgttacttta 1916717  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1916718 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacatatt 1916817  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    | ||||||||||| | ||||||||||||||    
T  1916818 atggaaaacttctatgtagaccacatttga 1916847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 35431984 - 35432213
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  35431984 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaaaacgaagttcctgttacttta 35432083  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacac-aaaaaagtcctacacat 198  Q
    | ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35432084 acataacatataattttaaaagggaaactaaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaaagtcctacacat 35432183  T
Q  199 tacggaaaacttctctatagaccacatttga 229  Q
    || ||||||||||||| ||| ||||||||||    
T  35432184 tatggaaaacttctctgtag-ccacatttga 35432213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19822194 - 19821965
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| | || |||||||||||    
T  19822194 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcaatttctgttacttta 19822095  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19822094 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaagtcctacacatt 19821995  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
     |||||||||||| | ||||||||||||||    
T  19821994 ccggaaaacttctttgtagaccacatttga 19821965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19842415 - 19842186
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| | || |||||||||||    
T  19842415 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcaatttctgttacttta 19842316  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19842315 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaagtcctacacatt 19842216  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
     |||||||||||| | ||||||||||||||    
T  19842215 ccggaaaacttctttgtagaccacatttga 19842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20890970 - 20890741
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||||||| || ||||||||| || | ||| |||||||||||||||||||||||  ||| |||| |||||||||||    
T  20890970 tcgcttgaatgtaaaaattgtcgtgaatcaaaccataatgtcaattacgatagattttgttattgttccataattctaagacgcagtttctgttacttta 20890871  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20890870 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaatgtcctacacatt 20890771  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  20890770 acggaaaacttctttgtagaccacatttga 20890741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 42109284 - 42109508
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| |||| |||||||||||| |||    
T  42109284 tgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttctgttactttaacata 42109383  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42109384 acatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaggtcctacacattacgga 42109483  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||| | | ||||||||||||||    
T  42109484 aaacttttttgtagaccacatttga 42109508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1273224 - 1273025
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||| ||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1273224 tcgcttgaatgtaaaaattgttgtgaatcaaagcataatgtcaattaccatagacattgttattgttccataattctagtacgtagttcctgttacttta 1273125  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1273124 acataacatataattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 1273025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21588954 - 21589069
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21588954 tcgcgtgaatctaaaaaattttgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 21589053  T
Q  101 aataacatataatttt 116  Q
    ||||||||||||||||    
T  21589054 aataacatataatttt 21589069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 184295 - 184194
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  184295 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 184196  T
Q  228 ga 229  Q
    ||    
T  184195 ga 184194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 2449529 - 2449428
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  2449529 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 2449430  T
Q  228 ga 229  Q
    ||    
T  2449429 ga 2449428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 976023 - 976122
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  976023 tgaagttcgtt--catgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 976120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 184391 - 184301
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  184391 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 184301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 975927 - 976017
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  975927 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 976017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 2449620 - 2449535
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  2449620 tgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 2449535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 23455676 - 23455733
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||||||||||||||||||||| |||||| ||||| ||||||||    
T  23455676 aatactacaaaacaaagtcctacacattacggaaaaattctctgtagactacatttga 23455733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 23828048 - 23827820
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23828048 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaatatgtcaataccaaagactttgttattgttccataattctagtacatagttcctgttactttaa 23827949  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23827948 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 23827849  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  23827848 cggaaaacttctctgtagaccacatttga 23827820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14994290 - 14994518
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14994290 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccgtaattctagtacgtagttcctgttactttaa 14994389  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14994390 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 14994489  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||| ||||||    
T  14994490 cggaaaacttctctgtagaccatatttga 14994518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 22729699 - 22729925
Alignment:
Q  3 gcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaa 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22729699 gcgtgaatctaaaaattgtcatgaatcaaagcaaaatgtcaataccaaagactgtgttattgttccataattctagtacgtagttcctgttactttaaaa 22729798  T
Q  103 taacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacg 202  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22729799 taacatataattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacg 22729898  T
Q  203 gaaaacttctctatagaccacatttga 229  Q
     ||||||| ||| ||||||||||||||    
T  22729899 taaaacttttctgtagaccacatttga 22729925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 41376233 - 41376459
Alignment:
Q  3 gcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41376233 gcgtgaatctaaaaattgttgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcttgttactttaaaa 41376332  T
Q  103 taacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacg 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41376333 taacatataattttgaaagggaaattgaagttcgttgacatgcaaatattttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacg 41376432  T
Q  203 gaaaacttctctatagaccacatttga 229  Q
    |||||||| ||| |||| |||| ||||    
T  41376433 gaaaacttttctgtagatcacacttga 41376459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19961917 - 19961689
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||| ||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19961917 tcgcgtgaatttaaaaaaatttgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 19961818  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  19961817 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcagcaagtaagaaaatgaatagtacacaaaaaagtcctacacatta 19961718  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    | |||||||||||| ||||||||||||||    
T  19961717 cagaaaacttctctgtagaccacatttga 19961689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 405973 - 406202
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  405973 tcgcttgaatgtaaaaattgttgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 406072  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  406073 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacgcaaaaaagtcctacacatt 406172  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  406173 acggaaaacttctctgtagatcacacttga 406202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 18265823 - 18266035
Alignment:
Q  13 aaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatata 111  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18265823 aaaaattgtcgtgaatcatagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctattactttaacataacatata 18265922  T
Q  112 attttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 211  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18265923 attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 18266022  T
Q  212 tctatagaccaca 224  Q
    ||| |||||||||    
T  18266023 tctgtagaccaca 18266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 18274836 - 18275048
Alignment:
Q  13 aaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatata 111  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18274836 aaaaattgtcgtgaatcatagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttccttttactttaacataacatata 18274935  T
Q  112 attttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 211  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18274936 attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttc 18275035  T
Q  212 tctatagaccaca 224  Q
    ||| |||||||||    
T  18275036 tctgtagaccaca 18275048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 21640168 - 21639991
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  21640168 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactatgttattgttacataattctagtacgtagttcctgttactttaa 21640069  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagta 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21640068 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagta 21639991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 37983261 - 37983485
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| |||||||| ||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| |||| |||||||||||| |||    
T  37983261 tgaatgtaaaaattatcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttctgttactttaacata 37983360  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37983361 acatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacgga 37983460  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||| | ||||||||||||||    
T  37983461 aaacttctttgtagaccacatttga 37983485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18492589 - 18492361
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||| |||||||||||| ||||||||| || | |||||||||||||||| ||||||||||  |||  ||| |||||||||||    
T  18492589 tcgcttgaatgtaaaaattgtcatgaatcaaagcataatgtcaattacgatagactttgttattgtttcataattctaagacgc-gtttctgttacttta 18492491  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18492490 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 18492391  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  18492390 acggaaaacttctttgtagaccacatttga 18492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24011667 - 24011894
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| || |||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  24011667 tcgcttgaatgtaaaaattttcttgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaaaacgcagtttctgttacttta 24011766  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||  ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24011767 acataacata--attttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcttacacatt 24011864  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  24011865 acggaaaacttctttgtagaccacatttga 24011894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26169132 - 26168904
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26169132 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 26169033  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26169032 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 26168933  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  26168932 cggaaaacttctctgtagaccacatttga 26168904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 45116118 - 45115890
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45116118 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaatacgaaagactttgttattgttccataattctagtacgtagttcctattactttaa 45116019  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45116018 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacatta 45115919  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||||||||||||||||    
T  45115918 cggaaaacttctctatagaccacatttga 45115890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 7894045 - 7893817
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7894045 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 7893946  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7893945 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 7893846  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  7893845 cggaaaacttctctgtagaccacatttga 7893817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32660512 - 32660284
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  32660512 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagcacgtagttcctgttactataa 32660413  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32660412 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 32660313  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  32660312 cggaaaacttctctgtagaccacatttga 32660284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20955569 - 20955780
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20955569 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 20955668  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20955669 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 20955768  T
Q  201 cggaaaacttct 212  Q
    ||||||||||||    
T  20955769 cggaaaacttct 20955780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22007268 - 22007040
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22007268 tcgcatgaatctaaaaattgttgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctggtacgtagttcctgttactttaa 22007169  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22007168 aataatatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 22007069  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  22007068 cggaaaacttctctgtagaccacatttga 22007040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32038733 - 32038503
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccata--attctagtacgtagttcctgttacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  32038733 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgttaataccaaagactttgttattgttccatataattctagtacgtagttcctattacttt 32038634  T
Q  99 aaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacat 198  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32038633 aaaataacatataattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacat 32038534  T
Q  199 tacggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||| ||||||||||||||    
T  32038533 tacggaaaacttctctgtagaccacatttga 32038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27716232 - 27716004
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27716232 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagacgttgttattgttccataattctagtacgtagttcctgttacttta 27716133  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27716132 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatcgtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacatt 27716034  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  27716033 acggaaaacttctctgtagatcacacttga 27716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 29956766 - 29956537
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  29956766 tcgcttgaatgtaaaaattgtcgtaaatcaaagcataatgtcaattaccatagactttgttattgttccataattctagatcgtacttcctgttacttta 29956667  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29956666 acataacttataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 29956567  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||||||||    
T  29956566 acggaaaacttctctgtagaccacatttga 29956537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 17697204 - 17696975
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17697204 tcgcttgaatgtaaaaattatcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 17697105  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17697104 acataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 17697005  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    |||| |||||||||| |||| |||| ||||    
T  17697004 acgggaaacttctctgtagatcacacttga 17696975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16720190 - 16719960
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16720190 tcgcttgaatgtaaaaattatcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 16720091  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacacat 198  Q
    | ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16720090 acataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacat 16719991  T
Q  199 tacggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||| |||| |||| ||||    
T  16719990 tacggaaaacttctctgtagatcacacttga 16719960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 31100427 - 31100199
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||| |||||||||| || | |||| | || || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  31100427 tcgcttgaatgtaaaaattgtcgtaaatcaaagcataacgccaattatcataggctttgttattgttccataattctagtacgtagttcctattacttta 31100328  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31100327 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtatacaaaaaagtcctacacatt 31100228  T
Q  200 acggaaaacttctctatagaccacatttg 228  Q
    ||||||||||| ||| |||||||||||||    
T  31100227 acggaaaacttatctgtagaccacatttg 31100199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13398223 - 13398452
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| | || |||||||||||    
T  13398223 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcaatttctgttacttta 13398322  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13398323 acataacatataattttaaaagggaaactaaagttcgttgacatacaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 13398422  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  13398423 acggaaaacttctttgtagaccacatttga 13398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 46909636 - 46909408
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  46909636 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaagacgcagttcctgttacttta 46909537  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  46909536 acataacatataattttaaaagggaaactgaagttcgttgacatgtaaatagtttcaataagtaagaaaatgaataggacacaaaaaa-tcctacacatt 46909438  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    | ||||||||||| | ||||||||||||||    
T  46909437 atggaaaacttctatgtagaccacatttga 46909408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5093859 - 5093630
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  |||   || |||||| ||||    
T  5093859 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcgatttctgttatttta 5093760  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  5093759 acataacatataattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacacatt 5093660  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    || |||||||||| | ||||||||||||||    
T  5093659 acagaaaacttctttgtagaccacatttga 5093630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 7889028 - 7888927
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  7889028 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 7888929  T
Q  228 ga 229  Q
    ||    
T  7888928 ga 7888927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7889124 - 7889034
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7889124 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 7889034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36087400 - 36087628
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36087400 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 36087499  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  36087500 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtatacaaaaaagtcctacacatta 36087599  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  36087600 cggaaaacttctctgtagaccacatttga 36087628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38655733 - 38655961
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38655733 tcgcgtgaatctaaaaattgtcgtgaatcaaagaaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 38655832  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38655833 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 38655932  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  38655933 cggaaaacttctctgtagaccacatttga 38655961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18199005 - 18198777
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  18199005 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagacgttgttattgttccataattctagtacgtagttcctgttacattaa 18198906  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18198905 aataacatataattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 18198806  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  18198805 cggaaaacttctctgtagaccacatttga 18198777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26951809 - 26951581
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26951809 tcgcgtgaatctaaaaattgtcgtgaatcaaaacataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 26951710  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26951709 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 26951610  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  26951609 cggaaaacttctctgtagaccacatttga 26951581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 35716611 - 35716383
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35716611 tcgcgtgaatctaaaaattgtcatgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 35716512  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  35716511 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacagatta 35716412  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| || |||||||||||    
T  35716411 cggaaaacttctctgtaaaccacatttga 35716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 49562219 - 49562447
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49562219 tcgcgtgaatctaaaaattgtcatgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcttgttactttaa 49562318  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  49562319 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcatacacatta 49562418  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  49562419 cggaaaacttctctgtagaccacatttga 49562447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31487525 - 31487298
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31487525 tcgcgtgaatctaaaaattgtcgtgaatgaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtatgtagttcctgttactttaa 31487426  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31487425 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacatta 31487327  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    | ||||||||||| |||||||||||||||    
T  31487326 ccgaaaacttctcaatagaccacatttga 31487298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 36091242 - 36091466
Alignment:
Q  5 gtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36091242 gtgaatctaaaaattgtcgtgaatcaaagtataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 36091341  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  36091342 acatataattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcatacacattacgga 36091441  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||| | ||||||||||||||    
T  36091442 aaacttctttgtagaccacatttga 36091466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 854875 - 854649
Alignment:
Q  5 gtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccata--attctagtacgtagttcctgttactttaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  854875 gtgaatctaaaaattgtcgtgaatcaaagcaaaatgttaataccaaagactttgttattgttccatataattctagtacgtagttcctattactttaaaa 854776  T
Q  103 taacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacg 202  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  854775 taacatataattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacg 854676  T
Q  203 gaaaacttctctatagaccacatttga 229  Q
    |||||||||||| ||||||||||||||    
T  854675 gaaaacttctctgtagaccacatttga 854649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36946966 - 36947195
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36946966 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 36947065  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36947066 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 36947165  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    |||||||| |||||| ||||||||||||||    
T  36947166 acggaaaaattctctgtagaccacatttga 36947195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13454692 - 13454921
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13454692 tcgcttgaatgtaaaaattgtcgtgaatgaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 13454791  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13454792 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 13454891  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||| ||||||||||| ||||||||| ||||    
T  13454892 acgaaaaacttctctgtagaccacacttga 13454921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16651723 - 16651494
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16651723 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccacaattctagtacgtagtacctgttacttta 16651624  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16651623 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 16651524  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||| ||||    
T  16651523 acggaaaacttctctgtagaccacacttga 16651494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4594415 - 4594186
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4594415 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaactgtcaattaccatagattttgttattgttccataattctagtacgtagttcctgttacttta 4594316  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4594315 acataacatataattttaaaagagaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 4594216  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||| ||||    
T  4594215 acggaaaacttctctgtagaccacacttga 4594186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12261131 - 12260901
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12261131 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 12261032  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacacat 198  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  12261031 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacat 12260932  T
Q  199 tacggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||| |||| |||| ||||    
T  12260931 tacggaaaacttctctgtagatcacacttga 12260901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 52418604 - 52418833
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||| |||||||||| ||| ||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  52418604 tcgcttgaatgtaaaaattgtcgtaaatcaaagcataatatcaattaacataaactttgttattgttccataattctagtacgtagttcctgttacttta 52418703  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52418704 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctatacatt 52418803  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    || |||||||||||| ||||||||||||||    
T  52418804 acagaaaacttctctgtagaccacatttga 52418833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 12825498 - 12825274
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  12825498 tgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgtttttgttccataattttagtacgtagttcctgttactttaacata 12825399  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12825398 acatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattatgga 12825299  T
Q  205 aaacttctctatagaccacatttga 229  Q
    ||| || ||| |||| |||| ||||    
T  12825298 aaatttatctgtagatcacacttga 12825274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 860138 - 859926
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||||||| || ||||||||| || | |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  860138 tcgcttgaatgtaaaaattgtcgtgaatcaaaacataatgtcaattacgatagactttgttattgttccataattctaagacgcagttcctgttacttta 860039  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  860038 acataacatataattttaaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcatacacatt 859939  T
Q  200 acggaaaacttct 212  Q
    |||||||||||||    
T  859938 acggaaaacttct 859926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 11826774 - 11826550
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| |||||||| ||||||| |||| || ||||||||| || | |||||||||||||||||||||||||||  ||| |||| |||||||||||| |||    
T  11826774 tgaatgtaaaaattatcgtgaaacaaaacataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttctgttactttaacata 11826675  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11826674 acatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 11826575  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||| | ||||||||||||||    
T  11826574 aaacttctttgtagaccacatttga 11826550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 33003697 - 33003923
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||| | ||||||||| || | |||||||||||||||||||||||||||   || |||| |||||||||||    
T  33003697 tcgcttgaatgtaaaaattgtcgtgaatcaaagtataatgtcaattacgatagactttgttattgttccataattcta---cgcagtttctgttacttta 33003793  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33003794 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacatt 33003893  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||| ||||||    
T  33003894 acggaaaacttctttgtagaccatatttga 33003923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29864635 - 29864770
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29864635 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 29864734  T
Q  100 aaataacatataattttgaaagggaaattgaagttc 135  Q
    | ||||||||||||||| ||||||||| ||||||||    
T  29864735 acataacatataattttaaaagggaaactgaagttc 29864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 47726925 - 47726776
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  |||  ||| |||||||||||    
T  47726925 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgc-gtttctgttacttta 47726827  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaata 150  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  47726826 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaata 47726776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 26948023 - 26947922
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  26948023 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 26947924  T
Q  228 ga 229  Q
    ||    
T  26947923 ga 26947922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26948119 - 26948029
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  26948119 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 26948029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43508690 - 43508767
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 77  Q
    |||| ||||| ||||||||||||||||||||| || |||||||| ||| | |||||||||||||||||||||||||||    
T  43508690 tcgcttgaatgtaaaaattgtcgtgaatcaaaacataatgtcaattacgatagactttgttattgttccataattcta 43508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 36006316 - 36006259
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| ||| |||||||||||||||||||| ||||||||||||||    
T  36006316 aatactacaaaataaagtgctatacattacggaaaacttctctgtagaccacatttga 36006259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 18256351 - 18256307
Alignment:
Q  185 aaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||    
T  18256351 aaagtgctacacattatggaaaacttctctgtagaccacatttga 18256307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 53521046 - 53521103
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| |||||||||||  ||||||||||| ||||||||||||||    
T  53521046 aatactacaaaacaaagtgctacacattaccaaaaacttctctgtagaccacatttga 53521103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2045059 - 2045287
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2045059 tcgcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 2045158  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2045159 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 2045258  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||| ||||||||||||||    
T  2045259 cggaaaacttctctgtagaccacatttga 2045287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 45503343 - 45503571
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45503343 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttctataattctagtacgtagttcctgttactttaa 45503442  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45503443 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacatta 45503542  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||  ||||||||||||||    
T  45503543 cggaaaacttctccgtagaccacatttga 45503571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 48651306 - 48651079
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48651306 tcgcgtgaatctaaaaattgtcgtgaatgaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtatgtagttcctgttactttaa 48651207  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48651206 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacatta 48651108  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||||||||||||||||    
T  48651107 cggaaaacttctctatagaccacatttga 48651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13926112 - 13926340
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  13926112 tcgcgtgaatctaaaaattgtcgtgaattaaagcaaaatgtcaataccaaagactttgttattgttccataattctattacgtagttcctgttactttta 13926211  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13926212 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatta 13926311  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||| | ||||||||||||||    
T  13926312 cggaaaacttctttgtagaccacatttga 13926340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 50709164 - 50708936
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50709164 tcgcgtgaatctaaaaaaatttgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 50709065  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50709064 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaaaaagtaagaaaatgaatagtacacaaaaaagtcctacacatta 50708965  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    | |||||||||||| ||||||||||||||    
T  50708964 cagaaaacttctctgtagaccacatttga 50708936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2047309 - 2047538
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2047309 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgttaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 2047408  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2047409 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 2047508  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  2047509 acggaaaacttctctgtagatcacacttga 2047538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36866720 - 36866949
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36866720 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgttaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 36866819  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36866820 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 36866919  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  36866920 acggaaaacttctctgtagatcacacttga 36866949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 49787173 - 49787395
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49787173 tgaatataaaaattgtcgtgaatcaaagcaaaatgccaattaccatagactttgttattgttccataattctagtacgtagttcctgttactttaacata 49787272  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||  ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  49787273 acata--attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatatgtaagaaaatgaagagtacacaaaaaagtcctacacattacgga 49787370  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||||| ||||||||| ||||    
T  49787371 aaacttctctgtagaccacacttga 49787395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 38210808 - 38211032
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| ||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||  ||| ||||||||||||||||| |||    
T  38210808 tgaatgtaaaaattgtcgtgaatcaaaacataatgtcaattaccatagactttgttattgttccataattctaagacgcagttcctgttactttaacata 38210907  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38210908 acatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacgga 38211007  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||| | ||||||||||||||    
T  38211008 aaacttctttgtagaccacatttga 38211032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 45501102 - 45501326
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaata 104  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||  ||| |||||||||||| |||| |||    
T  45501102 tgaatgtaaaaattgtcatgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaagacgcagttcctgttacattaacata 45501201  T
Q  105 acatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 204  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45501202 acatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgga 45501301  T
Q  205 aaacttctctatagaccacatttga 229  Q
    |||||||||| ||||||||||||||    
T  45501302 aaacttctctgtagaccacatttga 45501326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 29245744 - 29245515
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||| |||||||||||| || ||||| ||| |||| ||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  29245744 tcgcttgaatataaaaattatcgtgaatcaaaacataatgttaattaccatagactttgttattgttccataattctagtatttagttcctgttatttta 29245645  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29245644 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagttttaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 29245545  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||||||||    
T  29245544 acggaaaacttctctgtagatcacatttga 29245515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 26211932 - 26211715
Alignment:
Q  12 taaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatat 110  Q
    ||||||||||||| ||||| | || ||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26211932 taaaaattgtcgtaaatcagatcataatgtcaattactatagactttgttattgttccataattctagtacgtagttcctgttactttaacataacatat 26211833  T
Q  111 aattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaactt 210  Q
     ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  26211832 catttt-aaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatggtacacaaaaaagtcctatacattacggaaaactt 26211734  T
Q  211 ctctatagaccacatttga 229  Q
    || | ||||||||||||||    
T  26211733 ctttgtagaccacatttga 26211715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 48961015 - 48960787
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||  |||  ||| |||||||||||    
T  48961015 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgataaactttgttattgttccataattctaagacgc-gtttctgttacttta 48960917  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48960916 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 48960817  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | ||||||||||||||    
T  48960816 acggaaaacttctttgtagaccacatttga 48960787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15691762 - 15691533
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| | |||||| ||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||  ||| ||||  ||||||||||    
T  15691762 tcgcttgaatgttaaaattttcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaagacgcagtttatgttacttta 15691663  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15691662 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacatt 15691563  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||| | || |||||||||||    
T  15691562 acggaaaacttctttgtacaccacatttga 15691533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 39513065 - 39513294
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||| ||||||| || | ||||||| |||| |||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  39513065 tcgcttgaatgtaaaaattgtcgtaaatcaaaacatactgtcaattaccatagactttgttattgttccataattctaagacccagttcctgttacttta 39513164  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  39513165 acataacatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaacagtacacaaaaaagtcctacacatt 39513264  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||| ||| ||||||||||||||    
T  39513265 acggaaaacttatctgtagaccacatttga 39513294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 7480674 - 7480573
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  7480674 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 7480575  T
Q  228 ga 229  Q
    ||    
T  7480574 ga 7480573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 9534050 - 9533949
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  9534050 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 9533951  T
Q  228 ga 229  Q
    ||    
T  9533950 ga 9533949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 42496758 - 42496657
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  42496758 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 42496659  T
Q  228 ga 229  Q
    ||    
T  42496658 ga 42496657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 42496854 - 42496764
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42496854 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 42496764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 7480765 - 7480680
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7480765 tgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 7480680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 9534141 - 9534056
Alignment:
Q  6 tgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  9534141 tgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 9534056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36461702 - 36461625
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 77  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||    
T  36461702 tcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattcta 36461625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8256884 - 8256827
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| ||||| |||||||||||||||||| ||||||| ||||||    
T  8256884 aatactacaaaacaaagtgctacatattacggaaaacttctctttagaccatatttga 8256827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 21056912 - 21056875
Alignment:
Q  192 tacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  21056912 tacacattacggaaaacttctctgtagagcacatttga 21056875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 45862 - 45637
Alignment:
Q  4 cgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaat 103  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45862 cgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaat 45763  T
Q  104 aacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45762 aacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacgg 45663  T
Q  204 aaaacttctctatagaccacatttga 229  Q
    ||||||||||| ||||||||||||||    
T  45662 aaaacttctctgtagaccacatttga 45637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 209; Significance: 1e-114; HSPs: 4)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 51728 - 51955
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51728 tcgcgtgaatctaaaagttgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtaagtagttcctgttactttaa 51827  T
Q  101 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  51828 aataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaacgaatagtacac-aaaaagtcctacacatta 51926  T
Q  201 cggaaaacttctctatagaccacatttga 229  Q
    |||||||||||||||||||||||||||||    
T  51927 cggaaaacttctctatagaccacatttga 51955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 48907 - 49133
Alignment:
Q  3 gcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaa 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  48907 gcgtgaatctaaaaattgtcgtgaatcaaagcataatgtcaatatcaaagactttgttattgtttcataattctagtaggtagttcctgttactttaaaa 49006  T
Q  103 taacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacg 202  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  49007 taacatataattttgaatgggaaattgaagttcgttgacatggaaatagtttcaataagtaagaaaatgaacagtacacaaaaaattcctacacattacg 49106  T
Q  203 gaaaacttctctatagaccacatttga 229  Q
    |||||||||||| ||||||||||||||    
T  49107 gaaaacttctctgtagaccacatttga 49133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 40382 - 40483
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  40382 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 40481  T
Q  228 ga 229  Q
    ||    
T  40482 ga 40483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40286 - 40376
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  40286 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 40376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32675186 - 32674958
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcg-tgaatcaaagcaaaatgtcaataccaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32675186 tcgcgtgaatctaaaaattgtcgatgaatcaaaacataatgtcaatatcaaagactttgttattgttccataattctagtacgtagttcctgttacttta 32675087  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32675086 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacaca-aaaagtcctacacatt 32674988  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    | ||||||||||||| ||||||||||||||    
T  32674987 atggaaaacttctctgtagaccacatttga 32674958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30090163 - 30090392
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30090163 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagtacctgttacttta 30090262  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30090263 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 30090362  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||| ||||    
T  30090363 acggaaaacttctctgtagaccacacttga 30090392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3607748 - 3607977
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3607748 tcgcttgaatgtaaaaattgtcgtgaatgaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 3607847  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3607848 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 3607947  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||| ||||||||||| ||||||||| ||||    
T  3607948 acgaaaaacttctctgtagaccacacttga 3607977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20104904 - 20105132
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20104904 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 20105003  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20105004 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacac-aaaaagtcctacacatt 20105102  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| ||||||||| ||||    
T  20105103 acggaaaacttctctgtagaccacacttga 20105132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 12655381 - 12655280
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  12655381 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 12655282  T
Q  228 ga 229  Q
    ||    
T  12655281 ga 12655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 23184166 - 23184065
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  23184166 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 23184067  T
Q  228 ga 229  Q
    ||    
T  23184066 ga 23184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 23188433 - 23188332
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  23188433 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 23188334  T
Q  228 ga 229  Q
    ||    
T  23188333 ga 23188332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 34761427 - 34761326
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  34761427 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 34761328  T
Q  228 ga 229  Q
    ||    
T  34761327 ga 34761326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 39878261 - 39878160
Alignment:
Q  128 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacattt 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  39878261 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 39878162  T
Q  228 ga 229  Q
    ||    
T  39878161 ga 39878160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12655477 - 12655387
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  12655477 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 12655387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23184262 - 23184172
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  23184262 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 23184172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23188529 - 23188439
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  23188529 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 23188439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34761523 - 34761433
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  34761523 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 34761433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39878357 - 39878267
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcct 90  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  39878357 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcct 39878267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 38095492 - 38095549
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| |||||||||||||||||||||||| ||||||||||||||    
T  38095492 aatactacaaaacaaagtgctacacattacggaaaacttctctgtagaccacatttga 38095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 38936314 - 38936351
Alignment:
Q  192 tacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38936314 tacacattacggaaaacttctctatagaccacatttga 38936351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 37609790 - 37609743
Alignment:
Q  182 aaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  37609790 aaaaaagtgttacacattacggaaaacttctctgtagaccacatttga 37609743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 16678746 - 16678803
Alignment:
Q  172 aatagtacacaaaaaagtcctacacattacggaaaacttctctatagaccacatttga 229  Q
    |||| |||| || ||||| |||||||||||| ||||||||||| ||||||||||||||    
T  16678746 aatactacaaaacaaagtgctacacattacgaaaaacttctctgtagaccacatttga 16678803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3688 - 3459
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3688 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattctagtacgtagttcctgttacttta 3589  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3588 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 3489  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  3488 acggaaaacttctctgtagatcacacttga 3459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13600 - 13371
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13600 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattctagtacgtagttcctgttacttta 13501  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13500 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 13401  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  13400 acggaaaacttctctgtagatcacacttga 13371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25381 - 25610
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25381 tcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattctagtacgtagttcctgttacttta 25480  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25481 acataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacatt 25580  T
Q  200 acggaaaacttctctatagaccacatttga 229  Q
    ||||||||||||||| |||| |||| ||||    
T  25581 acggaaaacttctctgtagatcacacttga 25610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 2247 - 2031
Alignment:
Q  14 aaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttactttaaaataacatataa 112  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||  |||  |||||||||||||||| |||||||||||    
T  2247 aaaattgtcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaagacgccgttcctgttactttaacataacatataa 2148  T
Q  113 ttttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaacttct 212  Q
    || | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2147 ttctaaaagggaaactgaagttcgttgacatgcaaatagtttcaacaagtaagaaaatgaatagtatacaaaaaagtgctacacattacggaaaacttct 2048  T
Q  213 ctatagaccacatttga 229  Q
    || ||||||||||||||    
T  2047 ctgtagaccacatttga 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 34268 - 34467
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34268 tcgcttgaatgtaaaaattgttgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctagtacgtagttcctgttacttta 34367  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34368 acataacatttaattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaactcctacacatt 34467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27867 - 28066
Alignment:
Q  1 tcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaat-accaaagactttgttattgttccataattctagtacgtagttcctgttacttta 99  Q
    |||| ||||| |||||||||| ||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27867 tcgcttgaatgtaaaaattgttgtgaatcaaagcataatgtcaattaccatagacattgttattgttccataattctagtacgtagttcctgttacttta 27966  T
Q  100 aaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 199  Q
    | ||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27967 acataacatataattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacatt 28066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University