View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_626 (Length: 225)

Name: NF10954A_low_626
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_626
NF10954A_low_626
[»] chr7 (20 HSPs)
chr7 (1-225)||(39931056-39931281)
chr7 (1-206)||(36363991-36364196)
chr7 (1-164)||(4937588-4937751)
chr7 (7-164)||(234904-235061)
chr7 (1-164)||(17721152-17721315)
chr7 (1-164)||(29968491-29968654)
chr7 (1-161)||(31423122-31423282)
chr7 (1-164)||(11276708-11276871)
chr7 (1-164)||(47877500-47877662)
chr7 (31-161)||(37255278-37255408)
chr7 (1-150)||(25018778-25018927)
chr7 (2-131)||(17056079-17056208)
chr7 (23-142)||(17504041-17504160)
chr7 (23-142)||(17549054-17549173)
chr7 (77-130)||(6335940-6335993)
chr7 (1-42)||(13553644-13553685)
chr7 (1-42)||(23887722-23887763)
chr7 (1-42)||(23898898-23898939)
chr7 (70-150)||(11341327-11341407)
chr7 (2-42)||(32815776-32815816)
[»] chr5 (26 HSPs)
chr5 (1-177)||(33170162-33170338)
chr5 (1-164)||(30731774-30731937)
chr5 (1-164)||(42514237-42514400)
chr5 (1-164)||(27116633-27116796)
chr5 (1-164)||(28535136-28535298)
chr5 (1-164)||(42928648-42928811)
chr5 (1-164)||(31642028-31642191)
chr5 (1-164)||(23238900-23239063)
chr5 (7-164)||(8299648-8299805)
chr5 (7-164)||(35983257-35983414)
chr5 (8-156)||(27796009-27796157)
chr5 (1-142)||(10780740-10780881)
chr5 (5-150)||(41590627-41590772)
chr5 (2-131)||(476763-476892)
chr5 (5-150)||(4297773-4297918)
chr5 (116-164)||(27165525-27165573)
chr5 (67-150)||(36256309-36256392)
chr5 (86-164)||(12825716-12825794)
chr5 (66-111)||(25856964-25857009)
chr5 (31-111)||(27165455-27165535)
chr5 (70-156)||(15862206-15862292)
chr5 (116-178)||(22094825-22094887)
chr5 (70-156)||(42039234-42039320)
chr5 (116-164)||(25856999-25857047)
chr5 (2-42)||(26262337-26262377)
chr5 (2-42)||(26263447-26263487)
[»] chr3 (25 HSPs)
chr3 (1-177)||(962623-962799)
chr3 (1-164)||(2364794-2364957)
chr3 (1-164)||(34332275-34332438)
chr3 (2-164)||(10323032-10323194)
chr3 (1-161)||(48569499-48569659)
chr3 (1-164)||(3141368-3141531)
chr3 (31-161)||(19891197-19891327)
chr3 (1-150)||(52250585-52250733)
chr3 (1-164)||(19919689-19919852)
chr3 (1-164)||(16179464-16179627)
chr3 (1-158)||(12341715-12341872)
chr3 (1-129)||(48930278-48930406)
chr3 (31-167)||(20531541-20531677)
chr3 (5-131)||(6825372-6825498)
chr3 (67-150)||(8130482-8130565)
chr3 (1-42)||(10868242-10868283)
chr3 (1-42)||(21739983-21740024)
chr3 (5-150)||(25024308-25024453)
chr3 (2-111)||(44888474-44888583)
chr3 (10-129)||(40513193-40513312)
chr3 (1-131)||(31675481-31675611)
chr3 (1-131)||(31920811-31920941)
chr3 (1-42)||(14863925-14863966)
chr3 (1-42)||(15481218-15481259)
chr3 (2-42)||(31548017-31548057)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-164)||(105303-105466)
[»] chr8 (23 HSPs)
chr8 (1-164)||(7924903-7925066)
chr8 (1-164)||(8300320-8300483)
chr8 (1-164)||(172499-172662)
chr8 (1-164)||(41664828-41664991)
chr8 (1-164)||(9923118-9923281)
chr8 (1-161)||(25090907-25091067)
chr8 (8-161)||(13878954-13879107)
chr8 (1-164)||(20824816-20824979)
chr8 (82-181)||(38046858-38046957)
chr8 (1-111)||(12332418-12332528)
chr8 (5-150)||(36492912-36493057)
chr8 (116-218)||(43283248-43283350)
chr8 (66-111)||(43271007-43271052)
chr8 (67-150)||(4310368-4310451)
chr8 (1-160)||(37165581-37165740)
chr8 (1-161)||(42177015-42177172)
chr8 (1-42)||(24794385-24794426)
chr8 (1-94)||(32267141-32267234)
chr8 (3-53)||(18187774-18187824)
chr8 (1-42)||(11393808-11393849)
chr8 (1-42)||(43249264-43249305)
chr8 (10-110)||(8902398-8902498)
chr8 (2-42)||(16048377-16048417)
[»] chr4 (27 HSPs)
chr4 (1-164)||(23642051-23642214)
chr4 (2-164)||(47419321-47419483)
chr4 (1-161)||(55725166-55725326)
chr4 (1-164)||(23647709-23647872)
chr4 (1-164)||(1828000-1828163)
chr4 (1-164)||(19755784-19755947)
chr4 (1-164)||(19783859-19784022)
chr4 (1-161)||(48312614-48312774)
chr4 (7-161)||(11586664-11586818)
chr4 (1-164)||(46146194-46146357)
chr4 (1-163)||(5789552-5789714)
chr4 (7-164)||(15740737-15740894)
chr4 (1-161)||(54482619-54482779)
chr4 (67-150)||(19162703-19162786)
chr4 (117-164)||(19735311-19735358)
chr4 (67-160)||(36183058-36183151)
chr4 (1-42)||(42952965-42953006)
chr4 (116-156)||(23657822-23657862)
chr4 (2-42)||(51072154-51072194)
chr4 (6-41)||(13841794-13841829)
chr4 (1-56)||(19115061-19115116)
chr4 (67-150)||(40688597-40688680)
chr4 (36-150)||(7099013-7099127)
chr4 (1-98)||(7662768-7662865)
chr4 (25-129)||(38296258-38296362)
chr4 (116-156)||(8935599-8935639)
chr4 (78-130)||(54685161-54685213)
[»] scaffold1350 (1 HSPs)
scaffold1350 (1-167)||(58-224)
[»] chr2 (17 HSPs)
chr2 (1-160)||(14440265-14440424)
chr2 (1-164)||(28253237-28253400)
chr2 (31-218)||(37445556-37445743)
chr2 (7-161)||(33515673-33515827)
chr2 (1-150)||(26146746-26146895)
chr2 (1-150)||(43310790-43310939)
chr2 (1-111)||(12646091-12646201)
chr2 (67-150)||(13416202-13416285)
chr2 (1-42)||(11233950-11233991)
chr2 (1-44)||(15127059-15127102)
chr2 (116-178)||(15018180-15018242)
chr2 (4-50)||(30504774-30504820)
chr2 (2-44)||(43722504-43722546)
chr2 (1-42)||(33583887-33583928)
chr2 (1-57)||(10689178-10689234)
chr2 (1-111)||(37437559-37437670)
chr2 (4-44)||(42051734-42051774)
[»] chr1 (14 HSPs)
chr1 (1-164)||(6051120-6051283)
chr1 (1-111)||(35541604-35541714)
chr1 (7-164)||(47622543-47622700)
chr1 (2-131)||(22191243-22191372)
chr1 (1-44)||(45270878-45270921)
chr1 (1-42)||(20796296-20796337)
chr1 (6-42)||(26131910-26131946)
chr1 (10-129)||(13867302-13867421)
chr1 (2-131)||(3544562-3544691)
chr1 (1-42)||(15174750-15174791)
chr1 (1-98)||(32352770-32352867)
chr1 (2-42)||(3074384-3074424)
chr1 (2-42)||(21405476-21405516)
chr1 (10-110)||(33142682-33142782)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-164)||(3769-3932)
[»] chr6 (27 HSPs)
chr6 (1-164)||(2554123-2554286)
chr6 (1-164)||(13938236-13938398)
chr6 (23-161)||(14372473-14372611)
chr6 (1-163)||(18682034-18682196)
chr6 (1-164)||(17605794-17605957)
chr6 (94-167)||(10922067-10922140)
chr6 (1-161)||(10576710-10576870)
chr6 (7-110)||(24766880-24766983)
chr6 (7-158)||(17577184-17577335)
chr6 (131-218)||(5041980-5042066)
chr6 (1-111)||(21629582-21629692)
chr6 (1-44)||(34434897-34434940)
chr6 (1-111)||(15956452-15956561)
chr6 (19-128)||(18588902-18589011)
chr6 (116-156)||(5085601-5085641)
chr6 (78-150)||(15602855-15602927)
chr6 (2-53)||(1104408-1104459)
chr6 (2-105)||(14843598-14843701)
chr6 (70-160)||(26514245-26514335)
chr6 (19-124)||(7956149-7956254)
chr6 (1-42)||(13086178-13086219)
chr6 (116-177)||(24767004-24767065)
chr6 (70-163)||(32186201-32186294)
chr6 (116-156)||(503107-503147)
chr6 (116-156)||(8264748-8264788)
chr6 (10-42)||(14552041-14552073)
chr6 (10-42)||(19616348-19616380)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-111)||(28344-28454)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-98)||(4016-4113)
[»] scaffold0043 (1 HSPs)
scaffold0043 (2-105)||(34070-34173)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-98)||(134314-134411)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-98)||(312141-312238)
scaffold0002 (1-98)||(327595-327692)
[»] scaffold0418 (1 HSPs)
scaffold0418 (1-98)||(8187-8284)
[»] scaffold0026 (1 HSPs)
scaffold0026 (70-155)||(67606-67691)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-50)||(746-794)


Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 39931056 - 39931281
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931056 ttgagggagcttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 39931155  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggta-ggagtgatgggt 199  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39931156 tggaggatgggcggttggaggatgggggccggagttgttcttgttggtggtgggagatagtgagaattcgggatggggttgaaggtagggagtgatgggt 39931255  T
Q  200 ggtttgcgtcgtgtgtgtctttttgg 225  Q
    |||||| |||||||||||||||||||    
T  39931256 ggtttgtgtcgtgtgtgtctttttgg 39931281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 36364196 - 36363991
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||| || ||||    
T  36364196 ttgagggagtttaatattgctttgttgagtaaatggtgttggcgtttgttagtggagggtaatggtttggggcgtagggtgttggtggctagttaaggtg 36364097  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtg 200  Q
    ||||||||     | ||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| | ||||||  ||||||||||    
T  36364096 tggaggataaatagttggaggatgagggccgaagttgttcttcttgatggagggagatagtgagaatccgggatggggtaggaggtagtggtgatgggtg 36363997  T
Q  201 gtttgc 206  Q
    ||||||    
T  36363996 gtttgc 36363991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4937588 - 4937751
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  4937588 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 4937687  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  4937688 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 4937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 234904 - 235061
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    ||||||||||||||| |||| ||||||||||||||| | |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||||| ||    
T  234904 gagtttaatattgctttgttgggtaaatggtgttggtggttgttattggagagagaagctttgtggcgaaaggtgttagtggctaggtatggtgtggcgg 235003  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  235004 atggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 235061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17721315 - 17721152
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   || | ||||||| | | |||||||||||||||||||||||    
T  17721315 ttgagagagtttaatttagctttgttgggtaaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctaggtatggtg 17721216  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  17721215 tggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtgag 17721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 29968654 - 29968491
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| |||||||||||||| |    
T  29968654 ttgagggagtttaatattgctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgtggagaaaggtgttagtggctaggtatggcg 29968555  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  ||||||||| |||||| |||||||| |  |||||| |||||||||||||    
T  29968554 tggcggatggaggtttggaggatgcgggccggagttgttcgtcgtggtggagggagatagtgag 29968491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31423282 - 31423122
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| | |||| |||| || |||||||||||||| |||||||| ||  | |||| ||||||| |||||||||||||||||||| ||||||    
T  31423282 ttgagagagtttaacagtgctttgttggggaaatggtgttggcggttgttagttgatagggatggtttgtggcgtagggtgttggtggctaggcatggtg 31423183  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||| | ||||||||||    
T  31423182 tggcggatggtggtttggaggatgggggccggagttgttcttcgtggttgagggagatagt 31423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11276708 - 11276871
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| || | ||||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  11276708 ttgagggagtttaacattgctttggtgggtaaatggtgttggcggttgttattggagagggaagctttgtggagaaaggtgttagtggctaggtatggtg 11276807  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||| ||| |||||||| |  |||||| |||||||||||||    
T  11276808 tggcggatggaggtttggaggatggggcccggagttgttcgtcgtggtggagggagatagtgag 11276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 47877662 - 47877500
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||||||||| |||| | ||||||||||||||| |||||| ||||| | || | ||||||| |   |||||||||||||||||||||||    
T  47877662 ttgagagagtttaatattgctttgttggataaatggtgttggcggttgttattggagagggaagctttgtggcgacaggtgttggtggctaggtatggtg 47877563  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||| ||||||| ||||||||||  |||||| |||||||||||||    
T  47877562 tggcggatggaggtttggaggat-ggggccggagttgttcttcgtggtggagggagatagtgag 47877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 37255408 - 37255278
Alignment:
Q  31 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    ||||| |||||||| |||||||| ||  | |||| |||| || |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||     
T  37255408 aaatgatgttggcggttgttagttgatagggatggtttggggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggct 37255309  T
Q  131 gaagttgttcttgttggtggtgggagatagt 161  Q
    | |||||||| |  || ||| ||||||||||    
T  37255308 ggagttgttcatcgtgatggagggagatagt 37255278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25018778 - 25018927
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||||| || ||| || |   |   || |||| ||||||||||||||| || |||||||    
T  25018778 ttgagggagtttaatgttgcgttgttaagaaaatggtgttggcgtttattggtgaagaggagtagcttatggtatagggtgttggtggcaagatatggtg 25018877  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
     ||||| |||| || |||||| |||||| |||||| |||||| |||||||    
T  25018878 aggaggctgggaggttggaggttgggggtcgaagtggttcttcttggtgg 25018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 17056208 - 17056079
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||||||  | |||||||     
T  17056208 tgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttggtggcgcgttatggtga 17056109  T
Q  102 ggaggatgggcggctggaggatgggggccg 131  Q
    |||||||||| || ||| || |||||||||    
T  17056108 ggaggatgggaggttggtggttgggggccg 17056079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 17504041 - 17504160
Alignment:
Q  23 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 122  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17504041 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17504140  T
Q  123 tgggggccgaagttgttctt 142  Q
    ||||||||| ||| ||||||    
T  17504141 tgggggccggagtggttctt 17504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 17549173 - 17549054
Alignment:
Q  23 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 122  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17549173 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17549074  T
Q  123 tgggggccgaagttgttctt 142  Q
    ||||||||| ||| ||||||    
T  17549073 tgggggccggagtggttctt 17549054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 6335940 - 6335993
Alignment:
Q  77 gggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    |||||||||| |||||||||||||||   |||||| || |||||||||||||||    
T  6335940 gggtgttggttgctaggtatggtgtgcgcgatgggaggttggaggatgggggcc 6335993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13553644 - 13553685
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| |||||| |||||||||||||    
T  13553644 ttgagggagtttaattttgctttgttagataaatggtgttgg 13553685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23887763 - 23887722
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||    
T  23887763 ttgagggagtttaatatagctttgttaggaaaatggtgttgg 23887722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23898939 - 23898898
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||    
T  23898939 ttgagggagtttaatatagctttgttaggaaaatggtgttgg 23898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 11341407 - 11341327
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    |||| |||||||||||  ||||||||||||| |||||  ||| || ||||||  |||||||| |||||||| | |||||||    
T  11341407 tggtatagggtgttggctgctaggtatggtgaggaggcagggaggttggaggtcgggggccggagttgttccttttggtgg 11341327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 32815776 - 32815816
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||||||||||| ||||  ||||||||||||    
T  32815776 tgagggagtttaatattgctcttttagaaaaatggtgttgg 32815816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 33170338 - 33170162
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | ||||  |||||| |||||||||| ||||||||||||||||    
T  33170338 ttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagagatgggttgtggcgtagggtgttagtggctaggtatggtg 33170239  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggg 177  Q
     || ||||||  |  |||||||||||||||| |||||||| | ||||||| ||||||||||||| ||  ||||||||    
T  33170238 cggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcgggagatagtgaggattagggatggg 33170162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30731774 - 30731937
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| |   ||| || ||||||||||||||||    
T  30731774 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagacaggtattagtggctaggtatggtg 30731873  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  30731874 tggaggatggcggtttggaggatgggggccggagttgttcttcatggtggagggagattgtgag 30731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 42514400 - 42514237
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||| ||||||| | |||||| | ||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  42514400 ttgagggagtttaacattgctttgttgggtaaattgtgttggaggttgttattagagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 42514301  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  42514300 tggaggatggcagtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 42514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27116633 - 27116796
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| |||||   ||||  |||||| | | |||||| |||||||||||||| |    
T  27116633 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcaggatgcgttgtggagaaaggtgttagtggctaggtatggcg 27116732  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  27116733 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 27116796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28535136 - 28535298
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   || | ||||||| | | |||||||||||||||||||||||    
T  28535136 ttgagagagtttaatttagct-tgttgggtaaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctaggtatggtg 28535234  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  28535235 tggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtgag 28535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 42928811 - 42928648
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||||||||| |||| || || ||||||||||| |||||| | ||  | || | ||| |||||||||||||||||||||||||||| ||    
T  42928811 ttgagagagtttaatattgctttgttgggaaagtggtgttggcgattgttaatagatagggaagctttatggtgtagggtgttggtggctaggtatgatg 42928712  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| || ||||||||||    
T  42928711 tggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggaggcagatagtgag 42928648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31642191 - 31642028
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   || | ||||||| | | ||||||||||||||| |||||||    
T  31642191 ttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctagatatggtg 31642092  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  31642091 tggcggatggaggtttggaggatgggggccggagttgttcttcatggtggcgggagatagtgag 31642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23239063 - 23238900
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||| || |||||| |||| |||||||||||||| || |||||| ||||| | ||   ||||||| | | |||||| ||||||||||||||||    
T  23239063 ttgagggagttcaacattgctttgttgggtaaatggtgttgacggttgttattggagagggaatctttgtggagaaaggtgttagtggctaggtatggtg 23238964  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  23238963 tggcggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 23238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 8299648 - 8299805
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||    
T  8299648 gagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggagg 8299747  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  8299748 atggtggtttggaggatgggggccggagttgttctttgtggtggagggagattgtgag 8299805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 35983257 - 35983414
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   || | ||||||| | | ||||||||||||||||||||||| || ||    
T  35983257 gagtttaatttagctttgttggataaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctaggtatggtgaggcgg 35983356  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  35983357 atggaggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 35983414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 27796157 - 27796009
Alignment:
Q  8 agtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagga 107  Q
    ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | || |  || ||| |||||||||||||||||||||||||||||| |||    
T  27796157 agtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtgtggcgga 27796058  T
Q  108 tgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||  |  |||||||||||||||  ||||||||||  |||||| |||||    
T  27796057 tggtggtttggaggatgggggccagagttgttcttcgtggtggagggag 27796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 10780881 - 10780740
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |    
T  10780881 ttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggag 10780782  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttctt 142  Q
    ||| ||||||  |  |||||||||||||||| ||||| ||||    
T  10780781 tggcggatggtggtttggaggatgggggccggagttgctctt 10780740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 41590772 - 41590627
Alignment:
Q  5 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 104  Q
    ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||| ||||||||||||||| |||||||||| |||    
T  41590772 gggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtactttatggtatagggtgttggtggcgaggtatggtgagga 41590673  T
Q  105 ggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  41590672 ggatgggaggttggcggttgggggccggagaggttcttcttggtgg 41590627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 476892 - 476763
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  |||| || ||  | |||| ||| |||| ||||||| |||| || || |||||||     
T  476892 tgagggagtttaatagtgctttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtga 476793  T
Q  102 ggaggatgggcggctggaggatgggggccg 131  Q
    |||||  ||| || ||||||  ||||||||    
T  476792 ggaggcagggaggttggaggtagggggccg 476763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 4297773 - 4297918
Alignment:
Q  5 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 104  Q
    ||||||||||| ||||  | ||||| ||||||||||||| |||||| || ||| |   |  ||| |||| ||||||||||||||| |||||||||| |||    
T  4297773 gggagtttaatgttgcgttattaggcaaatggtgttggcatttgttggttgagaggagtagtttatggtatagggtgttggtggcgaggtatggtgagga 4297872  T
Q  105 ggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| || ||| || ||||| ||| ||  |||||| |||||||    
T  4297873 ggatgggaggttggcggttggggcccggagaggttcttcttggtgg 4297918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 27165525 - 27165573
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  27165525 tggaggatgggggccgaagttgttcttcttggtggagggagataatgag 27165573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 36256392 - 36256309
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| |||||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  36256392 ttgtggtatagggtgttggttgttagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 36256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 12825794 - 12825716
Alignment:
Q  86 tggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    |||||||||||||||||||||||||  |  ||||||||||||| |  ||||||||||  |||||| ||||||| |||||    
T  12825794 tggctaggtatggtgtggaggatggcagtttggaggatgggggtcagagttgttcttcgtggtggagggagattgtgag 12825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 25856964 - 25857009
Alignment:
Q  66 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 111  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  25856964 tttgtggagtagggtgttgttggctaggtatggcgtggaggatggg 25857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 27165455 - 27165535
Alignment:
Q  31 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 111  Q
    |||||||||||||| |||||||| ||  | || |  |||| | ||| |||||||||||||||||||| |||||||||||||    
T  27165455 aaatggtgttggcggttgttagtagatagggaagggttgttgcgtaaggtgttggtggctaggtatgttgtggaggatggg 27165535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 15862206 - 15862292
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||| |||||||||| | |||||||||||||  |||| ||||||| |||||| ||||||  | |||||||| | ||||||| |||||    
T  15862206 tggtatagggtgttgattgctaggtatggtgaagaggctgggcggttggaggttgggggatggagttgttcgtattggtggagggag 15862292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 22094825 - 22094887
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatgggg 178  Q
    |||||||||||||||||||||||||||  |||||| ||||| | | ||||||  |||||||||    
T  22094825 tggaggatgggggccgaagttgttcttcgtggtggcgggaggtggggagaattagggatgggg 22094887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 42039234 - 42039320
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||| ||||||||||||||| |  ||||||| || || ||||||| |||||||||||||||| |||  || || ||||||| |||||    
T  42039234 tggtatagggtgttggtggcgaaatatggtgaggtggttgggcggttggaggatgggggccggagtgctttttcttggtggagggag 42039320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 25856999 - 25857047
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  25856999 tggaggatgggggccggagttgttctttgtggtggagggagattgtgag 25857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26262337 - 26262377
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  26262337 tgagggagtttaatactgctttgttaggaaaatggtgttgg 26262377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26263447 - 26263487
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  26263447 tgagggagtttaatactgctttgttaggaaaatggtgttgg 26263487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 962623 - 962799
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | ||||  |||||| |||||||||| ||||||||||||||||    
T  962623 ttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagagatgggttgtggcgtagggtgttagtggctaggtatggtg 962722  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggg 177  Q
     || ||||||  |  ||||||||||||| || |||||||| | ||||||| ||||||||||||| ||  ||||||||    
T  962723 gggcggatggtggtttggaggatgggggtcggagttgttcatcttggtggagggagatagtgaggattagggatggg 962799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2364957 - 2364794
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  2364957 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 2364858  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  2364857 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 2364794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 34332275 - 34332438
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  34332275 ttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggctttgtggagaaaggtgttagtggctaggtatggtg 34332374  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||| | ||||||||||  |||||| |||||||||||||    
T  34332375 tggcggatggaggtttggaggatgggggcgggagttgttcttcgtggtggagggagatagtgag 34332438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 10323032 - 10323194
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||| |||||| |||| ||||||||||||||| | |||||  ||||| | |||| ||||||| | | |||||| |||||||||||||||||    
T  10323032 tgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttgttggagagggatgctttgtggagaaaggtgttagtggctaggtatggtgt 10323131  T
Q  102 ggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    |||||||||  |  |||||||||||||||| |||| |||||  |||||| ||||||| |||||    
T  10323132 ggaggatggcggtttggaggatgggggccggagttattcttcgtggtggagggagattgtgag 10323194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 48569499 - 48569659
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| || |||  |||||||||||||| |||||||| ||  | ||||  |||||| |||||||||||||||||||||||||||    
T  48569499 ttgagagagtttaacattgctttgctagagaaatggtgttggcggttgttagttgatagagatgggttgtggcgtagggtgttggtggctaggtatggtg 48569598  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||| ||||||  |  ||||||||||||||||||| |||||||  |||| | ||||||||||    
T  48569599 tggcggatggtggtttggaggatgggggccgaagctgttcttcgtggtagagggagatagt 48569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3141531 - 3141368
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| | |||| ||||||| |||||||||||| | |||||||| ||| | ||||  |||||| |||||||||| ||||||||||||||||    
T  3141531 ttgagggagtttaacactgctttgttaggaaaatggtgttggaggttgttagtagagagagatgggttgtggcgtagggtgttagtggctaggtatggtg 3141432  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
     || ||||||     |||||||||||||||| | |||||| | ||||||| |||||||||||||    
T  3141431 cggcggatggtgatttggaggatgggggccggaattgttcatcttggtggcgggagatagtgag 3141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 19891327 - 19891197
Alignment:
Q  31 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    |||||||||||||| |||||||| ||  | | || ||||||| ||||||||||||||||||||||||||||||  |||||  |  |||||||||||||||    
T  19891327 aaatggtgttggcgattgttagttgatagggttggtttgtggcgtagggtgttggtggctaggtatggtgtggcagatggtggtttggaggatgggggcc 19891228  T
Q  131 gaagttgttcttgttggtggtgggagatagt 161  Q
    ||||||||||||  |||||| ||||||||||    
T  19891227 gaagttgttcttcgtggtggagggagatagt 19891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 52250585 - 52250733
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| | |  | ||| |||| ||||||||||||||| || |||||||    
T  52250585 ttgagggagtttaatgttgcgttgttagggaaatggtgttggcgtttgttggtggagagggtag-tttatggtatagggtgttggtggcgagatatggtg 52250683  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
     |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  52250684 aggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 52250733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19919689 - 19919852
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||  |||| || |||||||||||| | |||||| ||||| | |||| ||||||| |   |||||| ||||||||||||||||    
T  19919689 ttgagggagtttaacattgccttgttgggcaaatggtgttggaggttgttattggagagggatgctttgtggagacaggtgttagtggctaggtatggtg 19919788  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    |||||||||   |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  19919789 tggaggatgacggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 19919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16179627 - 16179464
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| | ||| |||| || |||||||||||| | |||||||| ||| |||| |  |||||| ||| |||||| ||||| ||||||||||    
T  16179627 ttgagggagtttaatgtcgctttgttggggaaatggtgttggaggttgttagtagagagtgaagggttgtggcgtaaggtgttagtggcgaggtatggtg 16179528  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    | || | |||  |  |||||||||||||||| |||||||||| ||||||| ||||||| |||||    
T  16179527 tagacggtggaggtttggaggatgggggccggagttgttcttcttggtggcgggagattgtgag 16179464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 12341715 - 12341872
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |    
T  12341715 ttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggcg 12341814  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagat 158  Q
    ||||||||||  |  |||||||||||||||| ||||| ||||  |||||| |||||||    
T  12341815 tggaggatggtggtttggaggatgggggccggagttgctcttcgtggtggagggagat 12341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48930406 - 48930278
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||||||||  ||||||||||||||||||||||  |||| || ||| |  ||  ||| |||| |||||| |||||||| || |||||||    
T  48930406 ttgagggagtttaatattgcattgttaggtaaatggtgttggcggctgttggtagagaggaatagtttatggtatagggttttggtggcgagatatggtg 48930307  T
Q  101 tggaggatgggcggctggaggatgggggc 129  Q
     |||||||||| || |||||| |||||||    
T  48930306 aggaggatgggaggttggaggttgggggc 48930278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 20531541 - 20531677
Alignment:
Q  31 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    ||||||||||||||||||||| | ||  | || | ||||||| ||| ||||||||| |||||||||| || |||||||||  |  |||| ||||||||      
T  20531541 aaatggtgttggcgtttgttaattgatagggaaggtttgtggcgtaaggtgttggtagctaggtatgctgcggaggatggaggtttggaagatgggggtt 20531640  T
Q  131 gaagttgttcttgttggtggtgggagatagtgagaat 167  Q
    | |||| ||||| ||||||| ||||||||||||||||    
T  20531641 ggagttattcttcttggtggagggagatagtgagaat 20531677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 6825498 - 6825372
Alignment:
Q  5 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 104  Q
    ||||||||||||||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||| |||||||||||||||  ||||||||| |||    
T  6825498 gggagtttaatattgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgcggtatggtgagga 6825399  T
Q  105 ggatgggcggctggaggatgggggccg 131  Q
    ||||||| || ||| || |||||||||    
T  6825398 ggatgggaggttggcggttgggggccg 6825372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 8130565 - 8130482
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| |||||||||||| |||||||||||||||   |||||| || |||||| ||||||||| ||| |||||| |||||||    
T  8130565 ttgtggtatagggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggttgggggccggagtggttctttttggtgg 8130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10868283 - 10868242
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  10868283 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 10868242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21739983 - 21740024
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  21739983 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 21740024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 25024308 - 25024453
Alignment:
Q  5 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 104  Q
    ||||||||||| |  |||| | ||| |||||||||||| |  ||||||||||  | |||| ||| |||| |||||||||||  ||||| ||||||| |||    
T  25024308 gggagtttaatttatctctttaaggaaaatggtgttggaggatgttagtggatagagatggtttttggtatagggtgttggaagctagatatggtgagga 25024407  T
Q  105 ggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||  ||| || ||| || |||||| || |||||||||| |||||||    
T  25024408 ggcagggaggttggcggttgggggtcggagttgttcttattggtgg 25024453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 44888583 - 44888474
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||||||  | |||||||     
T  44888583 tgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttggtggcgcgttatggtga 44888484  T
Q  102 ggaggatggg 111  Q
    ||||||||||    
T  44888483 ggaggatggg 44888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 40513193 - 40513312
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatg 109  Q
    ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| ||||||  |||| ||| ||||||||| |  || ||    
T  40513193 tttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttatggtatagggtcctggtagctcggtatggtgagacggctg 40513292  T
Q  110 ggcggctggaggatgggggc 129  Q
    ||||| |||||| |||||||    
T  40513293 ggcggttggaggttgggggc 40513312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 31675611 - 31675481
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||   |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| ||||||| ||||||  || |||||||    
T  31675611 ttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttttggtatagggtgctggtggtgagatatggtg 31675512  T
Q  101 tggaggatgggcggctggaggatgggggccg 131  Q
     |||||  ||| || ||||||  ||||||||    
T  31675511 aggaggcagggaggttggaggtagggggccg 31675481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 31920811 - 31920941
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||   |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| ||||||| ||||||  || |||||||    
T  31920811 ttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttttggtatagggtgctggtggtgagatatggtg 31920910  T
Q  101 tggaggatgggcggctggaggatgggggccg 131  Q
     |||||  ||| || ||||||  ||||||||    
T  31920911 aggaggcagggaggttggaggtagggggccg 31920941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14863925 - 14863966
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||  ||||||||||||||||||||    
T  14863925 ttgagggagtttaattttgcattgttaggtaaatggtgttgg 14863966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15481218 - 15481259
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  15481218 ttgaaggagtttaatattgctttattaggtaaatggtgttgg 15481259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 31548057 - 31548017
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  31548057 tgagggagtttaatgtttctctgttaggaaaatggtgttgg 31548017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 105303 - 105466
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  105303 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 105402  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  105403 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 105466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 7925066 - 7924903
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  7925066 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 7924967  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  7924966 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 7924903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8300483 - 8300320
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  8300483 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 8300384  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  8300383 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 8300320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 172499 - 172662
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||| ||| | |||||| ||||| | ||||  |||||| | | |||||| ||||||||||||||||    
T  172499 ttgagggagtttaacattgctttgttgggtaaatggtgctggaggttgttattggagagggatgcgttgtggagaaaggtgttagtggctaggtatggtg 172598  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  172599 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41664828 - 41664991
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  41664828 ttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggctttgtggaggaaggtgttagtggctaggtatggtg 41664927  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  ||||||  ||||||||||||    
T  41664928 tggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggatggagatagtgag 41664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9923281 - 9923118
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   || | ||||||| | | |||||||||||||||||||||||    
T  9923281 ttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctaggtatggtg 9923182  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  9923181 tggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtgag 9923118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25091067 - 25090907
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||| ||  | || |  |||||| |||||||||||||||||| ||||||||    
T  25091067 ttgagagagtttaacattgctttgttagggaaatggtgttagcggttgttagttgatagagaggggttgtggcgtagggtgttggtggctatgtatggtg 25090968  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||| ||||||  |  |||||||||||||||| || |||||||  |||||| ||||||||||    
T  25090967 tggcggatggtggtttggaggatgggggccggagctgttcttcgtggtggagggagatagt 25090907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 13878954 - 13879107
Alignment:
Q  8 agtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagga 107  Q
    ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | || |  || ||| |||||||||||||||||||||||||||||| |||    
T  13878954 agtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtgtggcgga 13879053  T
Q  108 tgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    |||  |  |||||||||||||||  ||||||||||  |||||| ||||||||||    
T  13879054 tggtggtttggaggatgggggccagagttgttcttcgtggtggagggagatagt 13879107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20824979 - 20824816
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |    
T  20824979 ttgagagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggcg 20824880  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  20824879 tggaggatggtggtttggaggatgggggccggagttgttctttgtggtggagggagattgtgag 20824816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 38046957 - 38046858
Alignment:
Q  82 ttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttg 181  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||  || ||| |||||||||| ||||| |||| ||| ||||    
T  38046957 ttggttgctaggtatggtgtggaggatgggaggttggaggatgggggccgaagttgttcttcgtgatggagggagatagttagaattcggggtggtgttg 38046858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12332528 - 12332418
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag-ggtgatgatttgtggtgtagggtgttggtggctaggtatggt 99  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| |  | | |||| ||||||||||||||| || ||||||    
T  12332528 ttgagggagtttaatattgcgttgttaggcaaatggtgttggcgtttattagtggagaggtg-tagtctttggtatagggtgttggtggcgagatatggt 12332430  T
Q  100 gtggaggatggg 111  Q
    | ||||||||||    
T  12332429 gaggaggatggg 12332418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 36493057 - 36492912
Alignment:
Q  5 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 104  Q
    ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||| ||||||||||||||| |||||||||| |||    
T  36493057 gggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgaggtatggtgagga 36492958  T
Q  105 ggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  36492957 ggatgggaggttggcggttgggggccggagaggttcttcttggtgg 36492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 43283248 - 43283350
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgt 215  Q
    ||||||||||  |||| |||||||||||||||||| ||||||||||||||||  |||||| |||||  | |||   |||| |||||||||| ||||||||    
T  43283248 tggaggatggaagccggagttgttcttgttggtggagggagatagtgagaatttgggatgaggttggtgttagttatgataggtggtttgcttcgtgtgt 43283347  T
Q  216 gtc 218  Q
    |||    
T  43283348 gtc 43283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 43271052 - 43271007
Alignment:
Q  66 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 111  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||    
T  43271052 tttgtggtgtagggtgttgatggctaggtatggtgtggcggatggg 43271007  T

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Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 4310368 - 4310451
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| |||||||||||| ||||| |||| |||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  4310368 ttgtggtatagggtgttggttgctagatatgatgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 4310451  T

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Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 37165581 - 37165740
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||| ||| |||||||||||||| ||||| || || |||||| |  ||||||||||  | |  |  ||||||| ||||||  ||||||| || ||||| |    
T  37165581 ttgaaggaatttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggcttgtggtatagggtactggtggcgagatatggcg 37165680  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 160  Q
     ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  37165681 aggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 37165740  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42177015 - 42177172
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| ||| || |||| |  ||||| ||||| || |||||||| ||  | |||| ||||||| ||||||||||||||||||||||   |     
T  42177015 ttgagagagtttaacattcctttgttggagaaatgatgttgacggttgttagttgatagggatggtttgtggcgtagggtgttggtggctaggta---tc 42177111  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
     ||  |||||  |  ||||||||| |||||||||||||||||  |||||| ||||||||||    
T  42177112 aggcagatggtggtttggaggatgcgggccgaagttgttcttcgtggtggagggagatagt 42177172  T

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Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24794426 - 24794385
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  24794426 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 24794385  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 32267234 - 32267141
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggt 94  Q
    ||||| |||||||| || ||| |||| ||||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||    
T  32267234 ttgagagagtttaacatagctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgtggagaaaggtgttagtggctaggt 32267141  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 18187824 - 18187774
Alignment:
Q  3 gagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 53  Q
    |||||||||||| | |||| |||||||||||||||||||| | ||||||||    
T  18187824 gagggagtttaacactgctttgttaggtaaatggtgttggagattgttagt 18187774  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11393808 - 11393849
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||  ||||||||||||||||||||    
T  11393808 ttgagggagtttaattttgcattgttaggtaaatggtgttgg 11393849  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43249264 - 43249305
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||    
T  43249264 ttgagagagtttaattttgctttgttaggtaaatggtgttgg 43249305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 8902498 - 8902398
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatg 109  Q
    |||||| | ||||| ||||| ||||||||||||||  ||||||| ||  | | ||  ||||||| ||||||||| |||||| | ||||||| ||||||||    
T  8902498 tttaatctggctctcttaggaaaatggtgttggcggatgttagttgatagagctggcttgtggtatagggtgttagtggctcgttatggtgaggaggatg 8902399  T
Q  110 g 110  Q
    |    
T  8902398 g 8902398  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 16048377 - 16048417
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||| || ||||| ||||||||||||||||||    
T  16048377 tgagggagtttaacatggctcttttaggtaaatggtgttgg 16048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23642051 - 23642214
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  23642051 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 23642150  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23642151 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23642214  T

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Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 47419483 - 47419321
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||| |||||| |||||||||||||||||||| | |||||  ||||| | |||| ||||||| | | |||||| |||||||||||||||||    
T  47419483 tgagggagtttaacattgctttgttaggtaaatggtgttggaggttgttgttggagagggatgctttgtggagaaaggtgttagtggctaggtatggtgt 47419384  T
Q  102 ggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    |||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  47419383 ggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 47419321  T

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Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 55725166 - 55725326
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||  ||||| ||||||| |||||||||||| | |||||||| ||  | ||||  || |||| ||||||||||||||||||||||||||    
T  55725166 ttgagagagtttaactttgctttgttagggaaatggtgttggaggttgttagtagatagagatggattatggtatagggtgttggtggctaggtatggtg 55725265  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||||||||||  |  |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  55725266 tggaggatggtggtttggaggatgggggccggagttgttcttcttggtggagggagatagt 55725326  T

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Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23647709 - 23647872
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| | ||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  23647709 ttgagggagtttaacattgctttgttggataaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 23647808  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23647809 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23647872  T

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Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1828000 - 1828163
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| ||| || |||| | ||||||||||||||| |||||| |||||   |||| ||||||| | | |||||| ||||||||||||||||    
T  1828000 ttgagagagtttaacatttctttgttggataaatggtgttggcggttgttattggagaaggatgttttgtggaggaaggtgttagtggctaggtatggtg 1828099  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  ||| |||||||||||| |||||||||| ||||||| |||||||||||||    
T  1828100 tggaggatggaggtttggcggatgggggccggagttgttcttcttggtggcgggagatagtgag 1828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19755947 - 19755784
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  19755947 ttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagctttgtggaggaaggtgttagtggctaggtatggtg 19755848  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19755847 tggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19755784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19783859 - 19784022
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  19783859 ttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagctttgtggaggaaggtgttagtggctaggtatggtg 19783958  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19783959 tggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19784022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 48312774 - 48312614
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| || |||| |||||||||| ||| |||||||| ||  | || |  |||||| |||||||||||||||||||||||||||    
T  48312774 ttgagagagtttaacattgctttgctagggaaatggtgttagcggttgttagttgatagagaggggttgtggcgtagggtgttggtggctaggtatggtg 48312675  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||||||    
T  48312674 tggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatagt 48312614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 11586664 - 11586818
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    ||||||| || ||| |||||||| |||||||||||||| |||||||| ||    || |  |||||||||| |||||| ||||||||||||||||||| ||    
T  11586664 gagtttattactgccctgttaggaaaatggtgttggcggttgttagttgataaggaagggttgtggtgtaaggtgttagtggctaggtatggtgtggcgg 11586763  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||||  |  ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  11586764 atggaggtttggagaatgggggccgaagttgttcttcttggtggagggagatagt 11586818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 46146357 - 46146194
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||| |||||| |||||| ||||||| |||||||||||  | |||||||| ||| | ||||  |||||| ||||||||||||||||||| |||||||    
T  46146357 ttgagggggtttaacattgctttgttaggaaaatggtgttgaaggttgttagtagagagagatgggttgtggcgtagggtgttggtggctagatatggtg 46146258  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
      | ||||||  |  ||||| |||||||||| |||||||| | ||||||| |||||||||||||    
T  46146257 cagcggatggtggtttggagaatgggggccggagttgttcatcttggtggcgggagatagtgag 46146194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5789552 - 5789714
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| |  || |||| || || ||||||||| | |||||||| ||| |||| |  |||||| ||| |||||| ||||||||||||||||    
T  5789552 ttgagggagtttaatgtcactttgttgggaaagtggtgttggaggttgttagtagagagtgaagggttgtggcgtaaggtgttagtggctaggtatggtg 5789651  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 163  Q
    |||||| |||  |  |||||||||||||||| |||||||||| ||||||| ||||||| ||||    
T  5789652 tggagggtggaggtttggaggatgggggccggagttgttcttcttggtggcgggagattgtga 5789714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 15740894 - 15740737
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    |||||||| |||||| |||| |||||||||||||  || |||||| |||||   || | ||||||| | | |||||| ||||||||||||||||||||||    
T  15740894 gagtttaacattgctttgttgggtaaatggtgtttacggttgttattggagaaggaagttttgtggagaaaggtgttagtggctaggtatggtgtggagg 15740795  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||  |  ||| |||||||||||| ||||||||||  |||||| |||||||||||||    
T  15740794 atggaggtttggcggatgggggccggagttgttcttcatggtggcgggagatagtgag 15740737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 54482619 - 54482779
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| || |||| |||||||||||||| |||||||| ||  | || |  || ||| |||||||||||||||||||||||||||    
T  54482619 ttgagcgagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtg 54482718  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    |||  |||||  |  ||||||||||||| || ||||||||||  |||||| ||||||||||    
T  54482719 tggcagatggtggtttggaggatgggggtcggagttgttcttcgtggtggagggagatagt 54482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 19162703 - 19162786
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| |||||||||||| ||||| ||||||||   ||| ||| || |||||||||||||||| ||| |||||| |||||||    
T  19162703 ttgtggtatagggtgttggttgctagatatggtgttagggacgggaggttggaggatgggggccggagtggttctttttggtgg 19162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 19735311 - 19735358
Alignment:
Q  117 ggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  19735311 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgag 19735358  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 36183151 - 36183058
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 160  Q
    ||||||| ||||||  | ||||| || ||||||| ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  36183151 ttgtggtatagggtacttgtggcaagatatggtgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 36183058  T

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Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42952965 - 42953006
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  42952965 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 42953006  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 23657862 - 23657822
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  23657862 tggaggatgggggccgaagttgttcttcttggtggcgggag 23657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 51072154 - 51072194
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  51072154 tgagggagtttaatgttgctctgttagggaaatggtgttgg 51072194  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 13841829 - 13841794
Alignment:
Q  6 ggagtttaatattgctctgttaggtaaatggtgttg 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  13841829 ggagtttaatattgctcttttaggtaaatggtgttg 13841794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19115116 - 19115061
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 56  Q
    |||| |||||||||||||||| | ||||| |||||||||||| | |||||||||||    
T  19115116 ttgaaggagtttaatattgctttattagggaaatggtgttggaggttgttagtgga 19115061  T

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Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 40688680 - 40688597
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| | |||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  40688680 ttgtggtatcgggtgttggttggtagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 40688597  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 7099127 - 7099013
Alignment:
Q  36 gtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagt 135  Q
    ||||||| |||||||||| ||  | || | |||||||| | |||| ||| | ||||| ||||||| |||||||| | || |||||||||||||||| |||    
T  7099127 gtgttggagtttgttagttgatcgagagggtttgtggtatcgggttttgatagctagatatggtgaggaggatgagaggttggaggatgggggccggagt 7099028  T
Q  136 tgttcttgttggtgg 150  Q
     |||||  |||||||    
T  7099027 ggttctatttggtgg 7099013  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7662768 - 7662865
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || |||||||| ||| || || || |||||||||||    
T  7662768 ttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatgg 7662865  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 38296362 - 38296258
Alignment:
Q  25 ttaggtaaatggtgttggcgtttgttagtggagggtgatga-tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggat 123  Q
    ||||| |||||||||||||| || ||||||||| | || || ||| |||| ||||||||||||||| || ||||||| || | ||||| || |||||| |    
T  38296362 ttagggaaatggtgttggcggttattagtggagag-gaggagtttttggtatagggtgttggtggcgagatatggtgaggtgaatgggaggttggaggtt 38296264  T
Q  124 gggggc 129  Q
    ||||||    
T  38296263 gggggc 38296258  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 8935639 - 8935599
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  8935639 tggaggatgggggccggagttgttcttcttggtggcgggag 8935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 54685213 - 54685161
Alignment:
Q  78 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||    
T  54685213 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggcc 54685161  T

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Target: scaffold1350 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 224 - 58
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| ||||||| |||||||||||| | |||||||| ||  | ||||  |||||| ||| ||||||||||| |||||||||||    
T  224 ttgagagagtttaacattgctttgttagggaaatggtgttggaggttgttagtagatagagatggattgtggcgtaaggtgttggtggttaggtatggtg 125  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaat 167  Q
    ||||||||||  |  |||||||||||||||||||||| |||| ||||||| |||||||||| |||||    
T  124 tggaggatggtggtttggaggatgggggccgaagttgctcttcttggtggagggagatagtcagaat 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14440424 - 14440265
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| ||  | | || ||||||||||||||||||| ||||||||||||||     
T  14440424 ttgagagagtttaacattgctctgttggtgaaatggtgttggcgtttgttagttgataggggtggtttgtggtgtagggtgttgttggctaggtatggta 14440325  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 160  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||    
T  14440324 tggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatag 14440265  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 28253400 - 28253237
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||| | || |||||||| ||||||||||||||||||||||||||| | || |  || ||| ||| |||||||  ||||||||||||||    
T  28253400 ttgagagagtttaatttagccctgttaggaaaatggtgttggcgtttgttagtggagagggaagggttatggcgtaaggtgttgagggctaggtatggtg 28253301  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  28253300 tggcggatggaggtttggaggatgggggccggagttgttcttcttggtggagggagatagtgag 28253237  T

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Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 37445743 - 37445556
Alignment:
Q  31 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 130  Q
    ||||||||||||||| ||||||| ||  ||||||  || ||| ||||||||||||||||||||||||||| ||||||  || || |||||||||||||||    
T  37445743 aaatggtgttggcgtctgttagttgatagtgatgggttctggcgtagggtgttggtggctaggtatggtgcggaggacaggaggttggaggatgggggcc 37445644  T
Q  131 gaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 218  Q
    | ||||||||||  ||||||||||||   |||||||| ||||| ||| |   ||||||  |||||||||||||| ||  |||||||||    
T  37445643 ggagttgttcttcgtggtggtgggagtgtgtgagaattcgggacgggataagaggtagtggtgatgggtggtttacggagtgtgtgtc 37445556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 33515673 - 33515827
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    |||||||| |||||| || |||| ||||||||||| || |||||||| ||  | ||||  |||||| |||||||||||||||||||||||||||||| ||    
T  33515673 gagtttaacattgctttgctagggaaatggtgttgacggttgttagttgatagagatgggttgtggcgtagggtgttggtggctaggtatggtgtggcgg 33515772  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||||  |  ||||||||||||| || || |||||||  |||||| ||||||||||    
T  33515773 atggtggtttggaggatgggggtcggagctgttcttcgtggtggagggagatagt 33515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 26146895 - 26146746
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || ||||| |    
T  26146895 ttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcgagatatggcg 26146796  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
     |||||||||| || |||||| ||||||||| ||| ||| || |||||||    
T  26146795 aggaggatgggaggttggaggttgggggccggagtggttattcttggtgg 26146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 43310939 - 43310790
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||||||||||||| ||||  ||||||| ||||||||||||||||| || |||||| |   |  |||||||| ||||||||||||||| || ||||| |    
T  43310939 ttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttattggtggagaggagtagtttgtggtatagggtgttggtggcgagatatggcg 43310840  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
     |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  43310839 aggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 43310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12646201 - 12646091
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| ||||||||  ||| | ||||||| |||||||||||| | |||||||| ||  | ||||  ||||||| ||||||||||||||||||||| ||||    
T  12646201 ttgagagagtttaactttgttttgttaggaaaatggtgttggaggttgttagtagatagagatggattgtggtatagggtgttggtggctaggtaaggtg 12646102  T
Q  101 tggaggatggg 111  Q
    |||||||||||    
T  12646101 tggaggatggg 12646091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 13416285 - 13416202
Alignment:
Q  67 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||| | |||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  13416285 ttgtggtatcgggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 13416202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11233950 - 11233991
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  11233950 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 11233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15127059 - 15127102
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcg 44  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||    
T  15127059 ttgagggagtttaatgttgttatgttaggtaaatggtgttggcg 15127102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 15018242 - 15018180
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatgggg 178  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||| ||| ||  |||||||||    
T  15018242 tggaggttgggggccgaagttgttcttcttggtggcgggaggtagggaggattagggatgggg 15018180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 30504774 - 30504820
Alignment:
Q  4 agggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 50  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||    
T  30504774 agggagtttaatattgctctgttagggaagtagtgttggcatttgtt 30504820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43722504 - 43722546
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcg 44  Q
    |||||||||||||| ||||  ||||||||||||||||||||||    
T  43722504 tgagggagtttaatgttgcgttgttaggtaaatggtgttggcg 43722546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33583887 - 33583928
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||    
T  33583887 ttgagggagtttaatatagctttgttaagtaaatggtgttgg 33583928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10689234 - 10689178
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag 57  Q
    ||||||||||||||| ||||  ||||||| || |||||||||||||| || ||||||    
T  10689234 ttgagggagtttaatgttgcgttgttaggaaagtggtgttggcgtttattggtggag 10689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37437670 - 37437559
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggcta-ggtatggt 99  Q
    |||||||||||||| |  ||| |||| || ||||||||||||||| ||||||| ||  ||||||  || ||| |  | ||||||||||||| ||||||||    
T  37437670 ttgagggagtttaacaccgctttgttggggaaatggtgttggcgtctgttagttgatagtgatgggttctggcgntgagtgttggtggctagggtatggt 37437571  T
Q  100 gtggaggatggg 111  Q
      ||||||||||    
T  37437570 acggaggatggg 37437559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42051734 - 42051774
Alignment:
Q  4 agggagtttaatattgctctgttaggtaaatggtgttggcg 44  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  42051734 agggaatttaatgttgccctgttaggtaaatggtgttggcg 42051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6051283 - 6051120
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||| ||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  6051283 ttgaaggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcgggatgctttgtggagaaaggtgttagtggctaggtatggtg 6051184  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  6051183 tggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 6051120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35541714 - 35541604
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  35541714 ttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 35541615  T
Q  101 tggaggatggg 111  Q
    |||||||||||    
T  35541614 tggaggatggg 35541604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 47622543 - 47622700
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    ||||||||||| || |||||||| ||||| ||||| ||||||||||| ||  | || |  || ||  ||| |||||||||||||||||||||||||| ||    
T  47622543 gagtttaatatagccctgttaggaaaatgatgttgacgtttgttagttgatagggaagggttatgacgtaaggtgttggtggctaggtatggtgtggtgg 47622642  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||  |  |||||||| ||||||| |||||||||| ||||||| | |||||||||||    
T  47622643 atggaggtttggaggataggggccggagttgttcttcttggtggagagagatagtgag 47622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 22191243 - 22191372
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||||||  | |||||||     
T  22191243 tgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttggtggcgtgttatggtga 22191342  T
Q  102 ggaggatgggcggctggaggatgggggccg 131  Q
    |||||||||| || ||| || |||||||||    
T  22191343 ggaggatgggaggttggtggttgggggccg 22191372  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45270921 - 45270878
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcg 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  45270921 ttgagggagtttaatattgcattgttaggtaaatggtgttggcg 45270878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20796337 - 20796296
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  20796337 ttgagggagtttaattttgctttgttaggtaaatggtgttgg 20796296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 26131946 - 26131910
Alignment:
Q  6 ggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26131946 ggagtttaatgttgctctgttaggtaaatggtgttgg 26131910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 13867302 - 13867421
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatg 109  Q
    ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| ||||||  |||| ||| ||||||||| |  || ||    
T  13867302 tttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttatggtatagggtcctggtagctcggtatggtgagacggctg 13867401  T
Q  110 ggcggctggaggatgggggc 129  Q
    ||||| |||||| |||||||    
T  13867402 ggcggttggaggttgggggc 13867421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 3544562 - 3544691
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||||  || | ||||||||||||||||||||||  |||| || ||  | |||| ||| |||| ||||||| |||| || || |||||||     
T  3544562 tgagggagtttaattgtgttttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtga 3544661  T
Q  102 ggaggatgggcggctggaggatgggggccg 131  Q
    |||||  ||| || ||||||  ||||||||    
T  3544662 ggaggcagggaggttggaggtagggggccg 3544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15174750 - 15174791
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    ||||||||||||||| ||||||||||||| || |||||||||    
T  15174750 ttgagggagtttaatgttgctctgttagggaagtggtgttgg 15174791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 32352770 - 32352867
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| |||||||||| | ||| ||||||| ||||||||||||||  |||| |||||  | | || |||||||| |||||| || || |||||||||||    
T  32352770 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggatagaggtggtttgtggtatagggttttagtcgctaggtatgg 32352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 3074424 - 3074384
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  3074424 tgagggagtttaatgtttctctgttaggaaaatggtgttgg 3074384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 21405516 - 21405476
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  21405516 tgagggagtttaatgtttctctgttaggaaaatggtgttgg 21405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 33142682 - 33142782
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatg 109  Q
    |||||| | ||||| |||||||||||||||||| | |||||||| ||  | || |  ||||||| |||||||||||||||  | || |||| ||||||||    
T  33142682 tttaatttggctctcttaggtaaatggtgttggaggttgttagttgatagagaaggcttgtggtatagggtgttggtggcccgttacggtgaggaggatg 33142781  T
Q  110 g 110  Q
    |    
T  33142782 g 33142782  T

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Target: scaffold0472 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3932 - 3769
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | |||| ||||||| | | |||||| ||||||||||||||||    
T  3932 ttgagggagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggatgctttgtggagaaaggtgttagtggctaggtatggtg 3833  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||  ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  3832 tgacggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2554286 - 2554123
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| ||||||||||||||||  |||||| ||||| | || | ||||||| | | |||||| ||||||||||||||||    
T  2554286 ttgagagagtttaacattgctttgttgggtaaatggtgttggcagttgttattggagagggaagctttgtggagaaaggtgttagtggctaggtatggtg 2554187  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||| ||||    
T  2554186 tggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagataatgag 2554123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13938398 - 13938236
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| ||||| | |||||||||||| | |||||||| ||| | |||| || |||| |||||||||| ||||||||||||||||    
T  13938398 ttgagagagtttaacattgctttgttaagaaaatggtgttggaggttgttagtagagagagatggtt-gtggcgtagggtgttagtggctaggtatggtg 13938300  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
     || ||||||  |  |||||||||||||||| |||||||| | |||||||  ||||||||||||    
T  13938299 cggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcaggagatagtgag 13938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 14372473 - 14372611
Alignment:
Q  23 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 122  Q
    ||||||| ||||||||| ||||||||||||||||| | || |  || ||| ||| |||||||||||||||||||||||||| ||| |   |  |||||||    
T  14372473 tgttaggaaaatggtgtaggcgtttgttagtggagagggaagggttatggcgtaaggtgttggtggctaggtatggtgtggcggacgaaagtttggagga 14372572  T
Q  123 tgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||||||||| |||||||||| ||||||| ||||||||||    
T  14372573 tgggggccggagttgttcttcttggtggagggagatagt 14372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18682034 - 18682196
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||| ||||| | |||| ||||||| |||||||||||| | |||||||| ||  | || |  || ||||||| |||||||||||| |||||||||     
T  18682034 ttgagggattttaacactgctttgttaggaaaatggtgttggaggttgttagttgacagagaggggttatggtgtaaggtgttggtggccaggtatggtt 18682133  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 163  Q
     |||||||||  |  |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  18682134 cggaggatggaggtttggaggatgggggccggagttgttcttcttggtggcgggagatagtga 18682196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 17605794 - 17605957
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |    
T  17605794 ttgagagagtttaacattgctttgttggggaaatggtgttggtggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggcg 17605893  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 164  Q
    ||||||||||  |  |||||||||||||||| |||||||||| || |||| ||||||| |||||    
T  17605894 tggaggatggtggtttggaggatgggggccggagttgttcttctttgtggagggagattgtgag 17605957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 10922140 - 10922067
Alignment:
Q  94 tatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaat 167  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  10922140 tatggtgtggaggatggaaggctgaaggatgggggccggagttgttcttcttggtggagggagatagtgagaat 10922067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10576710 - 10576870
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| |||||||| |||| | |||| || ||||||||||||||  ||||||| ||  | |  | |||| || ||||||||||| |||||||||||||||    
T  10576710 ttgagagagtttaacattgttttgttggggaaatggtgttggcggctgttagttgataggggaggtttgcggagtagggtgttgttggctaggtatggtg 10576809  T
Q  101 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 161  Q
    ||| ||||||  |  |||||||||||||||| ||||| ||||  |||||| ||||||||||    
T  10576810 tggcggatggtggtttggaggatgggggccggagttgctcttcgtggtggagggagatagt 10576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 24766880 - 24766983
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||| | ||  | || | ||||||| | | |||||||||||||||||||||||||| ||    
T  24766880 gagtttaatgttgctttgttaggtaaatggtgttggcggttgttactagatagggaagctttgtggcgaaaggtgttggtggctaggtatggtgtggcgg 24766979  T
Q  107 atgg 110  Q
    ||||    
T  24766980 atgg 24766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 17577184 - 17577335
Alignment:
Q  7 gagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggagg 106  Q
    |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||    
T  17577184 gagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggagg 17577283  T
Q  107 atgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagat 158  Q
    |||   |  |||||||||||||||  ||||||||||  |||||| |||||||    
T  17577284 atgatggtttggaggatgggggccagagttgttctttgtggtggagggagat 17577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 5042066 - 5041980
Alignment:
Q  131 gaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 218  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||   ||||||||||    
T  5042066 gaagttattctttttggtggagggagatagtgagaatccgagatggggtagaaggtagtcgtga-gggtggtttgttgcgtgtgtgtc 5041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21629582 - 21629692
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag-ggtgatgatttgtggtgtagggtgttggtggctaggtatggt 99  Q
    ||||| |||||||| |||||| |||| || |||| |||||||||  ||||||| ||  ||||| | ||||||| ||||||||||| |||||||||||||     
T  21629582 ttgagagagtttaacattgctttgttggggaaattgtgttggcggctgttagttgataggtgagg-tttgtggagtagggtgttgttggctaggtatggc 21629680  T
Q  100 gtggaggatggg 111  Q
    ||||||||||||    
T  21629681 gtggaggatggg 21629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34434940 - 34434897
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcg 44  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  34434940 ttgagggagtttaatattgcattgttaggtaaatggtgttggcg 34434897  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15956452 - 15956561
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    ||||| || ||||||||||| ||||| || ||||||| |||||| |||||| | ||  | ||  | |||||| ||| |||||||||||||||||||||||    
T  15956452 ttgagagactttaatattgccctgttgggaaaatggttttggcggttgttaattgatagagaa-agttgtggcgtaaggtgttggtggctaggtatggtg 15956550  T
Q  101 tggaggatggg 111  Q
    ||| |||||||    
T  15956551 tggcggatggg 15956561  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 18589011 - 18588902
Alignment:
Q  19 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 118  Q
    ||||| || ||||| |||||||||||||||||||| ||  | || |  || |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  18589011 gctctattgggtaagtggtgttggcgtttgttagttgatagagacgggttatggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 18588912  T
Q  119 aggatggggg 128  Q
    ||||||||||    
T  18588911 aggatggggg 18588902  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5085601 - 5085641
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  5085601 tggaggatgggggccgaagttgttcttcttggtggcgggag 5085641  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 15602927 - 15602855
Alignment:
Q  78 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 150  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  15602927 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 15602855  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 1104408 - 1104459
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 53  Q
    |||||||| |||| | |||| |||||||||||||||||||| ||||||||||    
T  1104408 tgagggagattaacactgctttgttaggtaaatggtgttggagtttgttagt 1104459  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 14843598 - 14843701
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||||| || | ||||||||||||||||||||||  |||| || ||  | |||| ||| |||| ||||||| |||| || || |||||||     
T  14843598 tgagggagtttaatagtgatttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtga 14843697  T
Q  102 ggag 105  Q
    ||||    
T  14843698 ggag 14843701  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 26514335 - 26514245
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 160  Q
    |||| ||| |||||||||||| ||||||||| |||||  ||| |  |||||| ||||||||| ||| |||||  ||||||| |||||||||    
T  26514335 tggtatagagtgttggtggctcggtatggtgaggaggcagggagtttggaggttgggggccggagtggttctatttggtggagggagatag 26514245  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 7956149 - 7956254
Alignment:
Q  19 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 118  Q
    |||||||| ||||| || ||||||||| ||||||| ||  | |||| | | |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  7956149 gctctgttgggtaagtgatgttggcgtatgttagttgatagagatggtctttggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 7956248  T
Q  119 aggatg 124  Q
    ||||||    
T  7956249 aggatg 7956254  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13086219 - 13086178
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
T  13086219 ttgaaggagtttaatgttgctttgttaggtaaatggtgttgg 13086178  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 24767004 - 24767065
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggg 177  Q
    ||||||||||||| || ||||||||||  |||||| ||||||||||||| ||  ||||||||    
T  24767004 tggaggatgggggtcggagttgttcttcgtggtggagggagatagtgaggattagggatggg 24767065  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 32186294 - 32186201
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 163  Q
    |||| ||||||||||||||| || ||| ||| || || |||| || |||||| ||||||||| |||  ||||| ||||||| ||||| ||||||    
T  32186294 tggtatagggtgttggtggcgagatatagtgaggtggctgggaggttggaggttgggggccggagtgcttcttcttggtggagggaggtagtga 32186201  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 503107 - 503147
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  503107 tggaggatgggggccggagttgttcttcttggtggcgggag 503147  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 8264788 - 8264748
Alignment:
Q  116 tggaggatgggggccgaagttgttcttgttggtggtgggag 156  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  8264788 tggaggatgggggccggagttgttcttcttggtggcgggag 8264748  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 14552073 - 14552041
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||||| ||||||||||||||||||    
T  14552073 tttaatattgctctattaggtaaatggtgttgg 14552041  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 19616348 - 19616380
Alignment:
Q  10 tttaatattgctctgttaggtaaatggtgttgg 42  Q
    |||||||||||| ||||||||||||||||||||    
T  19616348 tttaatattgctttgttaggtaaatggtgttgg 19616380  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28454 - 28344
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 100  Q
    |||||||||||||||  |||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || ||||| |    
T  28454 ttgagggagtttaatgctgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcaagatatggcg 28355  T
Q  101 tggaggatggg 111  Q
     ||||||||||    
T  28354 aggaggatggg 28344  T

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Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4016 - 4113
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  4016 ttgaaggagtttaatagtgctctgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 4113  T

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Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 34070 - 34173
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 101  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||  |||| || ||| | |||| ||| |||| ||||||| |||| || || |||||||     
T  34070 tgagggagtttaatagtgctttgttaggtaaaaggtgttggcgaatgttggtagagagagatggtttttggtatagggtgctggtagcgagatatggtga 34169  T
Q  102 ggag 105  Q
    ||||    
T  34170 ggag 34173  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 134314 - 134411
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  134314 ttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 134411  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 312141 - 312238
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  312141 ttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 312238  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 327595 - 327692
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  327595 ttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 327692  T

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Target: scaffold0418 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8284 - 8187
Alignment:
Q  1 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 98  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || |||||||| ||| || || || |||||||||||    
T  8284 ttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatgg 8187  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 67691 - 67606
Alignment:
Q  70 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggga 155  Q
    |||| |||||||||| |  |||||||||||| |||||  ||| || |||||| ||||||| | ||| |||||| ||||||||||||    
T  67691 tggtatagggtgttgatttctaggtatggtgaggaggcagggaggttggaggttgggggctggagtggttcttcttggtggtggga 67606  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 746 - 794
Alignment:
Q  2 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 50  Q
    |||||||||||||| ||||||| ||||| || |||||||||||| ||||    
T  746 tgagggagtttaatgttgctctattagggaagtggtgttggcgtatgtt 794  T

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