View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_635 (Length: 223)
Name: NF10954A_low_635
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_635 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 26 - 223
Target Start/End: Complemental strand, 47680932 - 47680737
Alignment:
| Q |
26 |
ataatatgtatcattaattccaaatataaatgcaataccatatactaccaaatatacatggatgtacaaagtaatagctacattatacactatcgccaaa |
125 |
Q |
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| T |
47680932 |
ataatatgtatcattaattccaaatataaatgcaataccatatactaccaattatacatggatgtacaaagtaatagctacattatacactatcgccaaa |
47680833 |
T |
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| Q |
126 |
aaatccattattgttgtatagtattgatgatcatcaatgaattgagtcaaaccctaataaacgcaattggtttgtttctaggtttttcaaacatgatg |
223 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
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| T |
47680832 |
aaatccattattgttg--tagtattgatgatcatcaatgaattgagtcaaaccctaataaacgcaattggtttgtgtctcggtttttcaaacatgatg |
47680737 |
T |
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