View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_642 (Length: 222)
Name: NF10954A_low_642
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_642 |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13904577 - 13904405
Alignment:
| Q |
17 |
catcaagcctttttcgggtatgcattggttttcttgtattttcatcaaaattatgttctagtgtttacatgattggttggtgtagttgtgcttctctcag |
116 |
Q |
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| T |
13904577 |
catcaagcctttttcgggtatgcattggttttcttgtattttcatcaaaattatgttctagtgtttacatgattgcttggtgtagttgtgcttctctcag |
13904478 |
T |
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| Q |
117 |
gattgaagtccattttttgtgcaataacaattctatttttatttgattaggagtcatagtacaacatattatt |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
13904477 |
gattgaagtccattttttgtgcaataacaattctatttttatttgattaggagtcatagtacaacattttatt |
13904405 |
T |
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