View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_651 (Length: 221)
Name: NF10954A_low_651
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_651 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 11696970 - 11696803
Alignment:
| Q |
29 |
catagacaacatcatctggtgccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcat |
128 |
Q |
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| T |
11696970 |
catagacaacatcatctggtgccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcat |
11696871 |
T |
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| Q |
129 |
tacagtgtaagaaaatctattcttctccgacatattctcgaatacgcgtaaacctttctcaagacatc |
196 |
Q |
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| T |
11696870 |
tacagtgtaagaatatctattcttctccgacatatttttgaatacgcgtaaacctttctcaagacatc |
11696803 |
T |
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