View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_684 (Length: 214)

Name: NF10954A_low_684
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_684
NF10954A_low_684
[»] chr8 (11 HSPs)
chr8 (1-209)||(2529657-2529865)
chr8 (1-209)||(13199894-13200102)
chr8 (11-209)||(2170121-2170319)
chr8 (27-193)||(43270247-43270413)
chr8 (11-193)||(42177742-42177924)
chr8 (34-189)||(17699286-17699441)
chr8 (24-190)||(37433926-37434092)
chr8 (18-193)||(13879664-13879839)
chr8 (11-193)||(20824077-20824259)
chr8 (15-193)||(25090172-25090350)
chr8 (128-190)||(5181569-5181630)
[»] chr2 (6 HSPs)
chr2 (1-209)||(12645307-12645515)
chr2 (11-193)||(11000127-11000309)
chr2 (11-193)||(14439534-14439715)
chr2 (15-193)||(33515961-33516139)
chr2 (8-193)||(40176447-40176632)
chr2 (15-193)||(15917438-15917617)
[»] chr3 (10 HSPs)
chr3 (11-183)||(11310382-11310554)
chr3 (11-193)||(36801252-36801434)
chr3 (11-199)||(19890459-19890647)
chr3 (11-210)||(35214531-35214730)
chr3 (11-184)||(33496328-33496501)
chr3 (11-193)||(7031194-7031376)
chr3 (24-190)||(12342405-12342571)
chr3 (15-193)||(48570216-48570394)
chr3 (11-159)||(29523955-29524104)
chr3 (11-190)||(11203600-11203779)
[»] chr6 (11 HSPs)
chr6 (11-193)||(20883210-20883392)
chr6 (11-193)||(11462194-11462375)
chr6 (11-190)||(17606514-17606693)
chr6 (11-190)||(21630289-21630468)
chr6 (11-193)||(17579258-17579440)
chr6 (33-193)||(17573832-17573992)
chr6 (11-135)||(14513791-14513916)
chr6 (11-100)||(10577502-10577591)
chr6 (121-190)||(10577429-10577497)
chr6 (11-101)||(215184-215274)
chr6 (11-76)||(14373285-14373350)
[»] chr4 (9 HSPs)
chr4 (11-193)||(20002499-20002681)
chr4 (24-193)||(8360894-8361063)
chr4 (1-136)||(55725826-55725962)
chr4 (11-190)||(4548399-4548578)
chr4 (15-193)||(2822214-2822392)
chr4 (11-190)||(12697594-12697773)
chr4 (18-193)||(54483336-54483511)
chr4 (11-66)||(5148442-5148497)
chr4 (107-193)||(48311973-48312058)
[»] chr7 (3 HSPs)
chr7 (11-204)||(25619240-25619433)
chr7 (12-193)||(37254540-37254721)
chr7 (11-162)||(18530291-18530443)
[»] chr1 (5 HSPs)
chr1 (11-193)||(37191387-37191569)
chr1 (11-189)||(43388148-43388326)
chr1 (15-193)||(51993905-51994083)
chr1 (37-193)||(16917986-16918142)
chr1 (11-71)||(47623374-47623434)
[»] chr5 (8 HSPs)
chr5 (11-191)||(18359270-18359449)
chr5 (11-193)||(33385551-33385733)
chr5 (11-193)||(8300359-8300541)
chr5 (11-193)||(25857601-25857783)
chr5 (11-193)||(27795264-27795446)
chr5 (11-190)||(27766824-27767002)
chr5 (11-125)||(10774232-10774347)
chr5 (127-193)||(10776662-10776727)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 2529657 - 2529865
Alignment:
Q  1 gcagcaaaaacaaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccc 100  Q
    ||||| ||| |||||| || || ||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||| ||    
T  2529657 gcagccaaatcaaatgaaataaggatcgacgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagcaagagaatctactcc 2529756  T
Q  101 tacggc-ccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgt 199  Q
    | || | ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2529757 ttcgacaccaagccaagcccgcaccataggccacaatgtgccgaaaattgggcaagac-aaaaacaaatgagtcacatcttcaacatgcccacaccctgt 2529855  T
Q  200 aacaccaaac 209  Q
    ||||| ||||    
T  2529856 aacacaaaac 2529865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 13199894 - 13200102
Alignment:
Q  1 gcagcaaaaacaaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccc 100  Q
    ||||| ||| ||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||| |||| ||| ||||||| |||||||| ||||  |    
T  13199894 gcagccaaatcaaatggaataaggatcgacggaatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaataacaagagaatctacatc 13199993  T
Q  101 tacggc-ccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgt 199  Q
    | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  13199994 ttcgacaccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagac-aaaaacatatgagtcacatcttcaacatgcccacacccagt 13200092  T
Q  200 aacaccaaac 209  Q
    ||||| ||||    
T  13200093 aacacaaaac 13200102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 2170121 - 2170319
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||    
T  2170121 caaatgaaataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacacca 2170220  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgtaacaccaaac 209  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||| || |||| ||||    
T  2170221 agccaagcccgcaccataggccacaatgcaccaaaaattggacaagac-aaaaacaaatgattcacatcttcaacctgcccacaccccgttacacaaaac 2170319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 43270247 - 43270413
Alignment:
Q  27 cgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgcacca 125  Q
    ||||| ||||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||||||||||||||||||    
T  43270247 cgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaagcccgcacca 43270346  T
Q  126 taggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||| ||||||||| ||||||||||| |||||| ||||||| |||| ||||||||||||| ||||||||    
T  43270347 tagaccacaatgcaccaaaaattggacaagac-aaaaacaaatgattcacatcttcaacctgcccaca 43270413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 42177924 - 42177742
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||||||||||||||| || |||||||| |||||||||| |||| ||| ||| ||| || ||||| |||||||| || | |||    
T  42177924 caaatgaaataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagataacatgagaatctaccccttcgacacca 42177825  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||  | | |||||||||||||||||  || |||||||| |||||  |||||||||||| ||||||||||||||||||||||    
T  42177824 agccatcctcacaccataggccacaatgtaccgaaaattggacaaga-gaaaaacatatgattcacatcttcaacatgcccaca 42177742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 17699286 - 17699441
Alignment:
Q  34 atttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgcaccataggcca 132  Q
    |||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | ||||||||||||||||||| ||| ||    
T  17699286 atttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaagcccgcaccaaaggtca 17699385  T
Q  133 caatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcc 189  Q
    |||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  17699386 caatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgcc 17699441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 37433926 - 37434092
Alignment:
Q  24 gatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggcccaa-gccaagcccgca 122  Q
    |||||||| |||||||| || || ||||||||||||||||||| |||| ||| ||| |||||| ||||| | |||||| || | ||| ||||||||||||    
T  37433926 gatcgacgcgatttcaaaccacccgcatattcaataaattgcacaaaatgatctgagatagcatgagaatcgaccccttcgacacaaagccaagcccgca 37434025  T
Q  123 ccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    ||| |||||||||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| |||||    
T  37434026 ccaaaggccacaatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgccc 37434092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 13879839 - 13879664
Alignment:
Q  18 aagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaag 116  Q
    |||| ||| ||||| ||||||||| |||||||||||| ||||||||||| |||| |||   |   |||| ||||| ||||||||||  | |||||||||     
T  13879839 aagagagaccgacgcgatttcaagactccagcatattgaataaattgcataaaatgatccaagggagcatgagaatctacccctactacaccaagccaat 13879740  T
Q  117 cccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||||||||||||| || ||||| |  || ||||||| |||||| ||||| |||||||||||||||||||||    
T  13879739 cccgcaccataggccacaaagcaccaaagaaaggacaagaca-aaaacagatgagacacatcttcaacatgcccaca 13879664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 20824077 - 20824259
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || ||| |||| ||||||||||| || ||||||||||||||| ||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  20824077 caaatgaaataatgattgacgcgatttcaagccacctgcatattcaataaatcgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 20824176  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||| ||||||||| || |||||| | || |||||| ||||| | |||| ||||||||||||| ||||||||    
T  20824177 agccaagcccgcaccagaggccacaaagcaccaaaagtcggacaagac-aaaaataaatgattcacatcttcaacctgcccaca 20824259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 25090172 - 25090350
Alignment:
Q  15 tggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagcc 113  Q
    ||||||| ||||||||| ||||||||| | |||  ||||| ||||||||||| |||| ||| ||| | | || ||||| |||||||| |  | |||||||    
T  25090172 tggaagagagatcgacgcgatttcaaggcaccaatatattgaataaattgcataaaatgatctgatagaacatgagaatctaccccttctacaccaagcc 25090271  T
Q  114 aagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||||||||| || || || | ||| || ||| | ||||| ||||| ||||| |||||||||||||||    
T  25090272 aagcccgcaccataggccacaaagcaccgaagaatggacaggac-agaaacaaatgagacacattttcaacatgcccaca 25090350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 5181569 - 5181630
Alignment:
Q  128 ggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||| || |||||| ||||||||||| |||||||||||| || |||||||||| |||||    
T  5181569 ggccacaaggcaccaaaagttgggcaagac-aaaaacatatgattctcatcttcaacttgccc 5181630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 9e-63; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12645307 - 12645515
Alignment:
Q  1 gcagcaaaaacaaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccc 100  Q
    ||||| ||| |||||| || || |||||||||  |||||||||||  ||||||||||||||||||  |||| ||| |||||||||||||||| |||||||    
T  12645307 gcagccaaatcaaatgaaataaggatcgacggcgtttcaagcctcatgcatattcaataaattgcgtaaaatgatctgaaatagcaagagaatctacccc 12645406  T
Q  101 tacggc-ccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgt 199  Q
    | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  12645407 ttcgacaccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagac-aaaaacaaatgagtcacatcttcaacatgcccacaccctgt 12645505  T
Q  200 aacaccaaac 209  Q
    ||||| ||||    
T  12645506 aacacaaaac 12645515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 11000309 - 11000127
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||    
T  11000309 caaatgaaataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacacca 11000210  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||  || |||| |||| ||||||||||||||||||||||    
T  11000209 agccatgcccgcaccataggccacaatgcaccaaaaattggacaaga-taagaacaaatgattcacatcttcaacatgcccaca 11000127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 14439534 - 14439715
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| ||||| || ||||  ||||||||||| || ||||||||||||||||||| |||| ||| | | |||||| ||||| |||||||| || | |||    
T  14439534 caaatgaaagaaggaacgacaagatttcaagccacctgcatattcaataaattgcacaaaatgatctaagatagcatgagaatctaccccttcgacacca 14439633  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||  |||||| |||| ||||||||||||| | ||||||    
T  14439634 agccaagcccgcaccataggccacaatgcatcaaaaattggacaagac--aaaacaaatgattcacatcttcaacctacccaca 14439715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 33516139 - 33515961
Alignment:
Q  15 tggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagcc 113  Q
    ||||||| ||||||||| ||||||||||| ||  |||||| ||||||||||| |||| |||  | |  |||| ||||| |||||||| || | |||||||    
T  33516139 tggaagagagatcgacgcgatttcaagccacctacatattgaataaattgcataaaatgatcggtaggagcatgagaatctaccccttcgacaccaagcc 33516040  T
Q  114 aagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||||||||| || ||||| |  || ||||||| |||||||||||| |||||||||||||||||||||    
T  33516039 aagcccgcaccataggccacaaagcaccaaagaaaggacaagaca-aaaacatatgagacacatcttcaacatgcccaca 33515961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 40176447 - 40176632
Alignment:
Q  8 aaacaaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc- 106  Q
    |||||| ||||||| ||||||||  ||||||||| | ||| |||||| ||||||||||| |||| |||  ||   |||| ||||| |||||||| |  |     
T  40176447 aaacaagtggaagagagatcgacacgatttcaaggcaccaacatattgaataaattgcataaaatgatccgagggagcatgagaatctaccccttctaca 40176546  T
Q  107 ccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||| ||||||||||||||||||| || || || | ||| ||| ||||||| || ||||| |||||||||||||||||||||    
T  40176547 ccaagccaatcccgcaccataggccacaaagcaccgaagaatggacaaaacaaaaa-caaatgagacacatcttcaacatgcccaca 40176632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 15917438 - 15917617
Alignment:
Q  15 tggaagaaagatcgacgggattt-caagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggccca-agc 112  Q
    ||||| |||||||| || ||||| | |||| || ||||| | ||||||||||| |||| | | |||||||||  ||||| | ||||||||  | |  |||    
T  15917438 tggaaaaaagatcgtcgcgattttcgagccacctgcataatgaataaattgcaaaaaatggtctgaaatagcctgagaaccgacccctacaacactgagc 15917537  T
Q  113 caagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    || ||| ||||||  |||||||| ||||||||| |||| |||||||||| |||||||| ||||||||||||||||||||||    
T  15917538 catgcctgcaccaatggccacaacgcgccaaaagttggacaagacaaaa-acatatgattcacatcttcaacatgcccaca 15917617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 11310554 - 11310382
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || ||||| ||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||||| || | |||    
T  11310554 caaatgaaataaggatcggcgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagcaagagaatctaccccttcgacacca 11310455  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaa 183  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  11310454 agccaagcctgcaccataggccacagtgcgccaaaatttgggcaagac-aaaaacaaatgagtcacatcttcaa 11310382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 36801434 - 36801252
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||    
T  36801434 caaatgaaataaggatcgacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacacca 36801335  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||| |||| | |||| | ||||||||||| ||||||||    
T  36801334 agccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagaca-aaaataaatgatttacatcttcaacctgcccaca 36801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 19890459 - 19890647
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||||||||||||||| || |||||||||||| |||||| |||| ||| ||| |||||||||||| |||||||  || | |||    
T  19890459 caaatgaaataaagatcgacgggatttcaagccacctgcatattcaatatattgcacaaaatgatctgagatagcaagagaatctaccccctcgacacca 19890558  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgt 199  Q
    | ||| | | ||||||||| | ||||||| || |||||||| |||||| |||||||||||||||  |||||||||||||||||| |||||    
T  19890559 acccatgtctgcaccatagacaacaatgcaccgaaaattggacaagac-aaaaacatatgagtcgtatcttcaacatgcccacatcctgt 19890647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 35214730 - 35214531
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || ||| |||| ||||||||| | |  ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||    
T  35214730 caaatgaaataaggatggacgagatttcaagtcacgtgcatattcaataaattgcacaaaatgatatgagatagcatgagaatctaccccttcgacacca 35214631  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgtaacaccaaac 209  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||| || |||| |||| |||||||||||||||||| ||| || || |||| ||||    
T  35214630 agccatgcccgcaccataggccacaatgcaccaaaaattggacaagac-aagaacaaatgattcacatcttcaacatgccaacatcccgttacacaaaac 35214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 33496328 - 33496501
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||  | || ||||||||||||||||||| |||| ||  ||| |||||| ||||| |||||||| || | |||    
T  33496328 caaatgaaataaggatcgacgcgatttcaaatcacctgcatattcaataaattgcacaaaatgagctgagatagcatgagaatctaccccttcgacacca 33496427  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaac 184  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||| ||||| | |||| |||||||||||||    
T  33496428 agccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaac 33496501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 7031376 - 7031194
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  7031376 caaatgaaataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgacatagtatgagaatcgaccccttcgacacca 7031277  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||| ||||||||| || |||||| | || ||||||| |||| | |||| ||||||||||||| ||||||||    
T  7031276 agccaagcccgcaccagaggccacaaagcaccaaaagtcggacaagaca-aaaataaatgattcacatcttcaacctgcccaca 7031194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 12342571 - 12342405
Alignment:
Q  24 gatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgca 122  Q
    |||||||| |||||||| || || ||||||||||||||||||| |||| ||| ||| |||| | ||||| | ||| || || | ||||||||||||||||    
T  12342571 gatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagtatgagaatcgacctcttcgacaccaagccaagcccgca 12342472  T
Q  123 ccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    ||| |||||||||||| ||||||||||| |||||  || || | |||| ||||||||||||| |||||    
T  12342471 ccaaaggccacaatgcaccaaaaattggacaaga-gaagaataaatgattcacatcttcaacctgccc 12342405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 48570394 - 48570216
Alignment:
Q  15 tggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagcc 113  Q
    ||||||| ||||||||| ||||||||||| || ||||||| ||||||||||| |||| |||  | |  ||||  |||| |||||||| || | |||||||    
T  48570394 tggaagagagatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgatccgtatgagcattagaatctaccccttcgacaccaagcc 48570295  T
Q  114 aagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||||||||||||| || || || || |  || |||| | ||||||||||||| |||||||||||||||||||||    
T  48570294 aagcccgcaccataggccataaagcaccgaagaaaggacaagtc-aaaaacatatgagacacatcttcaacatgcccaca 48570216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 29524104 - 29523955
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||  |||||||| || || ||||||||||||||||||| |||| ||| ||| |||  | ||||| | |||||| || | |||    
T  29524104 caaatgaaataatgatcgacacgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatattatgagaatcgaccccttcgacacca 29524005  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaa 159  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  29524004 agccaagcccacaccaaaggccacaatgcaccaaaaattggacaagacaa 29523955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 11203600 - 11203779
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| |||||||| || || ||||||||||||||||||| |||  ||| ||| || | |  |||| | |||||  || | |||    
T  11203600 caaatgaaataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatctgagatggtattagaatcaaccccgtcgacacca 11203699  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||||||||||| |||||||||||  ||||||||||| |||||| ||||| | |||| ||||||||||||| |||||    
T  11203700 agccaagcccgcaccaaaggccacaatgaaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgccc 11203779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 20883392 - 20883210
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||||||||||||||| || ||||||||||||||||||| |||| | | ||| |||||| ||||| |||||||| || | |||    
T  20883392 caaatgaaataaagatcgacgggatttcaagccacctgcatattcaataaattgcacaaaatggtctgagatagcatgagaatctaccccttcgacacca 20883293  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||| | ||||||||||||||||||||| || |||||||| |||||| |||||||||||| ||| ||||||||||||||||||    
T  20883292 agccatgtccgcaccataggccacaatgcaccgaaaattggacaagac-aaaaacatatgattcatatcttcaacatgcccaca 20883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 11462194 - 11462375
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||| |||| ||| ||| ||| || ||||| |||||||| || | |||    
T  11462194 caaatgaaataaagatcgacgagattttaagccacctgcatattcaataaattgcacaaaatgatctgagataacatgagaatctaccccttcgacacca 11462293  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||| |||||||||||||| |||||||| || |||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  11462294 agccatgcccgcaccatagg-cacaatgcaccgaaaattggacaagac-aaaaacatatgattcacatcttcaacatgcccaca 11462375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 17606693 - 17606514
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| |||||||| || || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  17606693 caaatgaaataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 17606594  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||||||||||| || ||||||||| ||||||||||| ||||||| |||| | |||| ||||||||||||| |||||    
T  17606593 agccaagcccgcaccaaagaccacaatgcaccaaaaattggacaagaca-aaaataaatgattcacatcttcaacctgccc 17606514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 21630468 - 21630289
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||  | || ||||||||||||||||||| | || ||| |||||||| | ||||| | |||||| || | |||    
T  21630468 caaatgaaataatgatcgacgcgatttcaaaacacctgcatattcaataaattgcacacaatgatctgaaatagtatgagaatcgaccccttcgacacca 21630369  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||||||||||| ||||||||| || ||||||||||| ||||||| |||| | |||| ||||||||||||| |||||    
T  21630368 agccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagaca-aaaataaatgattcacatcttcaacctgccc 21630289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 17579440 - 17579258
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  17579440 caaatgaaataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 17579341  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||| ||||||||| || |||||| | || ||||||| |||| | |||| ||||||||||||| ||||||||    
T  17579340 agccaagcccgcaccagaggccacaaggcaccaaaagtcggacaagaca-aaaataaatgattcacatcttcaacctgcccaca 17579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 17573992 - 17573832
Alignment:
Q  33 gatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgcaccataggcc 131  Q
    ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | ||||||||||||||||||| |||||    
T  17573992 gatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccagaggcc 17573893  T
Q  132 acaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||| || |||||| | || ||||||| |||| | |||| ||||||||||||| ||||||||    
T  17573892 acaaggcaccaaaagtcggacaagaca-aaaataaatgattcacatcttcaacctgcccaca 17573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 14513916 - 14513791
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  14513916 caaatgaaataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 14513817  T
Q  110 agccaagcccgcaccataggccacaa 135  Q
    |||||||||||||||| |||||||||    
T  14513816 agccaagcccgcaccagaggccacaa 14513791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 10577591 - 10577502
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccc 100  Q
    |||||| || || |||||||| |||||||| || || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||    
T  10577591 caaatgaaataaggatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctacccc 10577502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 10577497 - 10577429
Alignment:
Q  121 caccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    ||||| |||||||||||| ||||||||||| ||||||| |||| | |||| ||||||||||||| |||||    
T  10577497 caccaaaggccacaatgcaccaaaaattggacaagaca-aaaataaatgattcacatcttcaacctgccc 10577429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 215184 - 215274
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccct 101  Q
    |||||| || || ||| |||| |||||||| || || ||||||||||||||||||| |||| ||| ||| |||||| || || ||||||||    
T  215184 caaatgaaataaggatagacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagcatgaaaatctacccct 215274  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 14373350 - 14373285
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatt 76  Q
    |||||||||||| |||||||| |||||||| |  |||||||| | ||||||||||| |||| ||||    
T  14373350 caaatggaagaatgatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaatgatt 14373285  T

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Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 20002499 - 20002681
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || |||||||||||| |||||||||| ||  |||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| ||||  ||    
T  20002499 caaatgaaataaagatcgacggaatttcaagccacctacatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcggcatca 20002598  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||| ||||||||||||||||||||||| || |||| ||| |||||| |||||||||||| ||||||||||||||||||||||    
T  20002599 agccatgcccgcaccataggccacaatgcaccgaaaaatggacaagac-aaaaacatatgattcacatcttcaacatgcccaca 20002681  T

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Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 8360894 - 8361063
Alignment:
Q  24 gatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgca 122  Q
    |||||||| |||||||| || || ||||||||||||||||| | |||| ||| ||| |||||| ||||| |||||||| || | ||||||||||||||||    
T  8360894 gatcgacgcgatttcaaaccacctgcatattcaataaattgaacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaagcccgca 8360993  T
Q  123 ccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||| |||||||||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| ||||||||    
T  8360994 ccaaaggccacaatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgcccaca 8361063  T

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Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 55725962 - 55725826
Alignment:
Q  1 gcagcaaaaacaaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccc 100  Q
    ||||| ||| |||||| || || |||||| |||||||||||||||| ||||||||||||||||||| |||| ||| |||||||| ||||||| |||||||    
T  55725962 gcagccaaatcaaatgaaataaggatcgatgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagtaagagaatctacccc 55725863  T
Q  101 tacggc-ccaagccaagcccgcaccataggccacaat 136  Q
    | || | ||||||||||||||||||||||||||||||    
T  55725862 ttcgacaccaagccaagcccgcaccataggccacaat 55725826  T

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Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 4548578 - 4548399
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| |||||||| || || ||||||||||||||||||| |||| ||| ||| |||| | ||||| | |||||| || | |||    
T  4548578 caaatgaaataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagtatgagaatcgaccccttcgacacca 4548479  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||| |||| | |||| ||||||||||||| |||||    
T  4548478 agccaagcccacaccagaggccacaatgcaccaaaaattgggcaagaca-aaaataaatgattcacatcttcaacctgccc 4548399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 2822392 - 2822214
Alignment:
Q  15 tggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagcc 113  Q
    ||||||||||||||||| ||||||||||| || ||||||| ||||||||||| |||| |||  |||  |||| ||||| ||||||||    | |||||||    
T  2822392 tggaagaaagatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgatccgaaggagcaggagaatctacccctttaacaccaagcc 2822293  T
Q  114 aagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||||||||| || || || |  || || ||  ||||||| ||||| |||||||||||||||||||||    
T  2822292 aagcccgcaccataggccacaaagcaccgaagaacggacatga-taaaaacacatgagacacatcttcaacatgcccaca 2822214  T

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Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 12697594 - 12697773
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || ||| |||| |||||||| || || ||||||||||||||||||| |||  |||  || |||| | ||||| | |||||| || | |||    
T  12697594 caaatgaaataatgattgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatcggagatagtatgagaatcgaccccttcgacacca 12697693  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| |||||    
T  12697694 agccaagcccgcaccaaaggccataatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgccc 12697773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 54483511 - 54483336
Alignment:
Q  18 aagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaag 116  Q
    |||| ||| ||||| ||||||||| | |||||||||| ||||||||||| |||| |||   |   |||| ||||| ||||||||||  | ||||| |||     
T  54483511 aagagagaccgacgcgatttcaaggcaccagcatattgaataaattgcataaaatgatcaaagggagcatgagaatctacccctactacaccaagtcaat 54483412  T
Q  117 cccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||||||||||||| || ||||| | ||| ||||||| |||||| ||||| |||||||||||||||||||||    
T  54483411 cccgcaccataggccacaaagcaccaaagaatggacaagaca-aaaacaaatgagacacatcttcaacatgcccaca 54483336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 5148442 - 5148497
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgca 66  Q
    |||||| || ||||||||||||||||||||||| || |||||||||||||||||||    
T  5148442 caaatgaaataaagatcgacgggatttcaagccacctgcatattcaataaattgca 5148497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 48311973 - 48312058
Alignment:
Q  107 ccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||| ||| ||||||||||||||| || || || | ||| ||||| ||||| || ||||| |||||||||||||||||||||    
T  48311973 ccaagccaatcccacaccataggccacaaagcaccgaagaatggacaagataaaaa-caaatgagacacatcttcaacatgcccaca 48312058  T

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Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 25619240 - 25619433
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||||||||||||||| || |||||||| |||||||||| |||| ||| ||| |||||| ||||| |||| ||| |  | |||    
T  25619240 caaatgaaataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagatagcatgagaatctacaccttcaacacca 25619339  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccacaccctgtaacac 204  Q
    |||||  |||||||| ||||||||||||| || |||||||| |||||| |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  25619340 agccattcccgcaccttaggccacaatgcaccgaaaattggacaagac-aaaaacatatgattcacatcttcaacatgcccacatcctgtgacac 25619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 37254540 - 37254721
Alignment:
Q  12 aaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaa 110  Q
    ||||| || |||||||||||||||| |||||| || ||||||||||||||||||| |||| ||| ||| |||||| |||||  ||||||| || | ||||    
T  37254540 aaatgaaataaagatcgacgggattccaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatttaccccttcgacaccaa 37254639  T
Q  111 gccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||| ||||||||||||||||||||||| || |||||||| |||||| |||||||||||| |||||||||||| ||| |||||    
T  37254640 gccatgcccgcaccataggccacaatgcaccgaaaattggacaagac-aaaaacatatgattcacatcttcaaaatgtccaca 37254721  T

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Target: chr7; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 18530291 - 18530443
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||| ||| ||||||||||| || ||||||||||||||||||| |||| ||| ||| |||||| ||||| |||||||| || | |||    
T  18530291 caaatgaaataaggatcaacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctgatatagcatgagaatctaccccttcgacacca 18530390  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaa 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18530391 agccaagcccgcaccataggccacaatgcaccaaaaattggacaagacaaaaa 18530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 37191569 - 37191387
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || ||||||||||||||||||||||| || |||||||| |||||||||| |||| ||| ||| ||| || ||||| ||||||||  | | |||    
T  37191569 caaatgaaataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagataacatgagaatctacccctttgacacca 37191470  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||  |||||||||||||||| ||||| || |||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  37191469 agccattcccgcaccataggccataatgcaccgaaaattggacaagac-aaaaacatatgattcacatcttcaacatgcccaca 37191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 43388148 - 43388326
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| |||||||| || || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  43388148 caaatgaaataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatatgagatagtatgagaatcgaccccttcgacacca 43388247  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcc 189  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  43388248 agccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgcc 43388326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 51994083 - 51993905
Alignment:
Q  15 tggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagcc 113  Q
    ||||||| ||||||||| ||||||||| | |||||||||| ||||||||||| |||| |||   |   |||| ||||| |||||||| |  | |||||||    
T  51994083 tggaagagagatcgacgcgatttcaaggcaccagcatattgaataaattgcataaaatgatccaagtgagcatgagaatctaccccttctacaccaagcc 51993984  T
Q  114 aagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    || ||||||||||||||||||| || || || | ||| |||||| |||| || ||||| |||||||||||||||||||||    
T  51993983 aatcccgcaccataggccacaaagcaccgaagaatggacaagac-aaaatcaaatgagacacatcttcaacatgcccaca 51993905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 16918142 - 16917986
Alignment:
Q  37 tcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-ccaagccaagcccgcaccataggccacaa 135  Q
    ||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | ||||||||||||||||||| |||||||||    
T  16918142 tcaagccacctgcatattcaataaattgcacaaagtgatctgacatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaa 16918043  T
Q  136 tgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
     || |||||| | || ||||||| |||| | |||| ||||||||||||| ||||||||    
T  16918042 agcaccaaaagtcggacaagaca-aaaataaatgattcacatcttcaacctgcccaca 16917986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 47623434 - 47623374
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaa 71  Q
    |||||||||||| |||||||| |||||||| |  |||||||| | ||||||||||| ||||    
T  47623434 caaatggaagaacgatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaa 47623374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 18359449 - 18359270
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| |||||||||||||| ||||||||||| || || |||| ||||||||||| |||| ||| ||| |||||| ||||| |||||| | || | |||    
T  18359449 caaatgaaagaaagatcgacgagatttcaagccacctgcgtatttaataaattgcacaaaatgatctgagatagcatgagaatctaccctt-cgacacca 18359351  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccca 191  Q
    ||||| |||||| |||||||||||||||| || ||||| || ||||||| ||||||||||| ||||||||||||||||||||    
T  18359350 agccatgcccgccccataggccacaatgcaccgaaaatcggacaagaca-aaaacatatgattcacatcttcaacatgccca 18359270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 33385733 - 33385551
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || ||||| || ||||||||||| ||  |||| ||||||||||||| |||| ||| ||| |||||| ||||| |||| | | || | |||    
T  33385733 caaatgaaataaggatcggcgcgatttcaagccacctacataatcaataaattgcacaaaatgatctgagatagcatgagaatctactcattcgacacca 33385634  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||||||| |||| | |||| ||||||||||||| ||||||||    
T  33385633 agccaagcccacaccaaaggccacaatgcaccaaaaattggacaagaca-aaaataaatgattcacatcttcaacctgcccaca 33385551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 8300541 - 8300359
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  8300541 caaatgaaataatgatcgacgtgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 8300442  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    ||||||||||||| || ||||||||| || |||||| | || |||||| ||||| | |||| ||||||||||||| ||||||||    
T  8300441 agccaagcccgcatcagaggccacaaggcaccaaaagtcggacaagac-aaaaataaatgattcacatcttcaacctgcccaca 8300359  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 25857783 - 25857601
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||  ||| ||| |||| | ||||| | |||||| || | |||    
T  25857783 caaatgaaataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacacca 25857684  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||||||| ||||||||| || |||||| |    |||||| ||||| | |||| ||||||||||||| ||||||||    
T  25857683 agccaagcccgcaccagaggccacaaggcaccaaaagtcaaacaagac-aaaaataaatgattcacatcttcaacctgcccaca 25857601  T

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Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 27795264 - 27795446
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| |||| ||| ||||| ||||||||| |||||||||||| ||||||||||| || | |||   |   |||| ||||| ||||||||||  | |||    
T  27795264 caaatgaaagagagaccgacgcgatttcaagactccagcatattgaataaattgcataagatgatccaagggagcatgagaatctacccctactacacca 27795363  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    || ||| ||||||||||||||||||| || ||||| |  || ||||||||||| || ||||| |||||||||||||||||||||    
T  27795364 agtcaatcccgcaccataggccacaaagcaccaaagaaaggacaagacaaaaa-caaatgagacacatcttcaacatgcccaca 27795446  T

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Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 27766824 - 27767002
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||  | || ||||||||||||||||||| | || ||| |||||||| | ||||| | |||||| || | |||    
T  27766824 caaatgaaataatgatcgacgcgatttcaaaacacctgcatattcaataaattgcacacaatgatctgaaatagtatgagaatcgaccccttcgacacca 27766923  T
Q  110 agccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgccc 190  Q
    ||||||||| ||| || ||||||||| || ||||||||||| |||||| ||||| | |||| ||||||||||||| |||||    
T  27766924 agccaagcctgca-caaaggccacaaagcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacctgccc 27767002  T

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Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 10774232 - 10774347
Alignment:
Q  11 caaatggaagaaagatcgacgggatttcaagcctccagcatattcaataaattgcagaaaaagatttgaaatagcaagagaagctacccctacggc-cca 109  Q
    |||||| || || |||||||| ||||||||||| || ||||||||||||||||||| |||| ||| | | |||||| ||||| |||||||| || | |||    
T  10774232 caaatgaaataaggatcgacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctcagatagcatgagaatctaccccttcgacacca 10774331  T
Q  110 agccaagcccgcacca 125  Q
    ||||||||||||||||    
T  10774332 agccaagcccgcacca 10774347  T

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Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 10776662 - 10776727
Alignment:
Q  127 aggccacaatgcgccaaaaattgggcaagacaaaaaacatatgagtcacatcttcaacatgcccaca 193  Q
    |||||||||||| ||||||||||| |||||| ||||| | |||| ||||||||||||| ||||||||    
T  10776662 aggccacaatgcaccaaaaattggacaagac-aaaaataaatgattcacatcttcaacttgcccaca 10776727  T

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