View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_687 (Length: 214)
Name: NF10954A_low_687
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_687 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40809999 - 40810212
Alignment:
| Q |
1 |
attgtaagggattttaattgagcgaaggttagtgtttgagaagaatcggcatctataagagcggttttgtttggggaagaagtgactttgttgaagaggt |
100 |
Q |
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| T |
40809999 |
attgtaagggattttaattgagcgaaggttagtgtttgagaagaatcggcatctataagagcggttttgtttggggaagaagtgactttgttgaagaggt |
40810098 |
T |
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| Q |
101 |
gtgttacgagagagaggtttggattttttggtaagataagggaaggtcttaaggacctgtatattccatctgaaccgtaacctgatttctgcattggaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40810099 |
gtgttacgagagagaggtttggattttttggtaagataagggaaggtcttaaggacctgtatattccatctgaaccgtaacctgatttctgcattggaaa |
40810198 |
T |
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| Q |
201 |
agtacttttttgaa |
214 |
Q |
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|||||||||||||| |
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| T |
40810199 |
agtacttttttgaa |
40810212 |
T |
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